Citrus Sinensis ID: 043828

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580------
Protein Sequence
MGSCISLARKGAFFSKKSQAIGNIDNTASTNNKRNDASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIPHNQG
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccEEEEEEEcccccEEEEEEEEccccccHHHHHHHHHHHHHHHcccccccEEEEEEEEEEcccEEEEEEcccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHccccccccccHHHHHcccccccccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccccHHHHHHHHHHHccccccEEEHHHHHHHHccHHHHccHHHHHHHHHHHcccccccccHHHHHHHHHHcccccccHHHHHHHHHHHcccccccccHHHHHHHHHcccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEcccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHEEccHHccccccEEEEEEEccccccEEEEHHHHHHHcccHHHHHHHHHHHHHHHHHcccccEccEEEEEEcccEEEEEEEcccccEHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEcccccccccEEEcccEEEEEccccEEEcccccHHHHcHHHHcccEcHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccccccccccccHHHHHHHHccccccHHHcccHHHHHcccccccccccccccEcHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccEEEHHHHHHHHHHHcccccHHHHHHHHHHHcccccccEcHHHHHHHHHHHHHHccHHHHHHHHHHHcccccccEEHHHHccHHHHHccccccHHHHHHHHHHHcccccccEcHHHHHHHHHcccccccccccccHHHHHHcccHEcccccccccccccccccHHHEcccEEcccccEEcccccc
Coil and Loop (DISEMBL)
MGSCISLArkgaffskksqaignidntastnnkrndasskkpspspkhesvskhasnvdkksISFQLRsvvsnpaegnildkytfgkelgrgefgithqcfeietgetYACKKIAKEKlkteididDVRREVEIMrhlpkhpnivtykeayedKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVChengvmhrdlkpenflfadgsensqlKAIDFGlsiffkpgeqfceivgspyymapevlrrnygpeidvWSAGVIIYILLcgvppfwaetEEGIAHAIIRGkidferdpwpkvSKEAKELVKnmldpnpynrltleevlenpwikndnhapnvslggnvtsRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMdtdkngdlTFEELKDGLNMigqkvsdpdVKMLMEAAdvdgngllscdEFVTMSVHLKRIGNDDILSQAFRFfdknqsgfievDELKEVllednagpngdqTIRDILrdvdldrdgriSFEEFKAMMTSGADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVElkksgqlriphnqg
Flexible Loop (DISEMBL)
mgscislarkgaffskksqaignidntastnnkrndasskkpspspkhesvskhasnvdkksisfqlrsvvsnpaegnilDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAkeklkteididdvRREVEimrhlpkhpnivtykEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELvknmldpnpynRLTLEEVLENPWIKndnhapnvslggnVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLednagpngdqtirdilrdvdldRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMElnksmelkksvelkksgqlriphnqg
Low Complexity Region (SEG)
MGSCISLARKGAFFSKKSQAIGNIDNTASTNNKRNDAsskkpspspkHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIevdelkevlledNAGPNGDQTirdilrdvdldrdgriSFEEFKAMMTSGADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIPHNQG
Disordered region (IsUnstruct)
******************************************************************************ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV*****ELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAG**GDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWK*********************************************************
Disordered Region (DISOPRED)
*G************************************************************************AEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT***************************************************************
Disordered Region (DISEMBL)
MGSCISLARKGAFFSKKSQAIGNIDNTAST****************************DKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIPHNQG
Disordered Region (DISPRO)
**********************************************************************VSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS*********QYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLR******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGSCISLARKGAFFSKKSQAIGNIDNTASTNNKRNDASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIPHNQG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	586	2.2.26 [Sep-21-2011]
Q9SIQ7	582	Calcium-dependent protein	yes	no	0.955	0.962	0.656	0.0
Q38873	535	Calcium-dependent protein	no	no	0.894	0.979	0.602	0.0
Q42438	533	Calcium-dependent protein	no	no	0.885	0.973	0.601	0.0
Q6NLQ6	538	Calcium-dependent protein	no	no	0.825	0.899	0.596	0.0
P93759	530	Calcium-dependent protein	no	no	0.825	0.913	0.602	0.0
Q9M9V8	545	Calcium-dependent protein	no	no	0.839	0.902	0.608	0.0
Q9SSF8	541	Calcium-dependent protein	no	no	0.911	0.987	0.536	1e-178
Q8W4I7	528	Calcium-dependent protein	no	no	0.858	0.952	0.582	1e-176
Q9FMP5	528	Calcium-dependent protein	no	no	0.873	0.969	0.511	1e-153
Q3E9C0	523	Calcium-dependent protein	no	no	0.773	0.866	0.554	1e-150

>sp|Q9SIQ7|CDPKO_ARATH Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana GN=CPK24 PE=2 SV=1

 Score =  788 bits (2035), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/596 (65%), Positives = 472/596 (79%), Gaps = 36/596 (6%)

Query: 1   MGSCISLARKGAFFSKKSQAIGNIDNTASTNNKRNDASSKKPSPSPKHESVSKHASNVDK 60
           MGSC+S   KG+ F K+               +R  +S+ + S  P+ +S    ++N+ +
Sbjct: 1   MGSCVSSPLKGSPFGKRPV-------------RRRHSSNSRTSSVPRFDS----STNLSR 43

Query: 61  KSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK 120
           + I      V+  P    I  KY  GKELGRGEFG+TH+C EI T E +ACK+I+KEKL+
Sbjct: 44  RLIFQPPSRVLPEPIGDGIHLKYDLGKELGRGEFGVTHECIEISTRERFACKRISKEKLR 103

Query: 121 TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYT 180
           TEID++DVRREVEIMR LPKHPNIV++KEA+EDKDA+YLVME+CEGGELFDRIV++GHYT
Sbjct: 104 TEIDVEDVRREVEIMRCLPKHPNIVSFKEAFEDKDAVYLVMEICEGGELFDRIVSRGHYT 163

Query: 181 ERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ 240
           ERAAA+V KTIL +VKVCHE+GV+HRDLKPENFLF++G+E +QLKAIDFGLSIFFKP ++
Sbjct: 164 ERAAASVAKTILEVVKVCHEHGVIHRDLKPENFLFSNGTETAQLKAIDFGLSIFFKPAQR 223

Query: 241 FCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI 300
           F EIVGSPYYMAPEVLRRNYGPEIDVWSAGVI+YILLCGVPPFWAETEEGIAHAI+RG I
Sbjct: 224 FNEIVGSPYYMAPEVLRRNYGPEIDVWSAGVILYILLCGVPPFWAETEEGIAHAIVRGNI 283

Query: 301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           DFERDPWPKVS EAKELVKNMLD NPY+RLT++EVLE+PWI+N   APNV+LG NV ++I
Sbjct: 284 DFERDPWPKVSHEAKELVKNMLDANPYSRLTVQEVLEHPWIRNAERAPNVNLGDNVRTKI 343

Query: 361 KQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV 420
           +QF +MN+FKKKVLR+VADNLP +++A I QMF  MDTDKNG LTFEEL+DGL  IGQ V
Sbjct: 344 QQFLLMNRFKKKVLRIVADNLPNEEIAAIVQMFQTMDTDKNGHLTFEELRDGLKKIGQVV 403

Query: 421 SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDE 480
            D DVKMLM+AAD DGNG+LSCDEFVT+S+HLKR+G D+ L +AF++FDKN +GFIE+DE
Sbjct: 404 PDGDVKMLMDAADTDGNGMLSCDEFVTLSIHLKRMGCDEHLQEAFKYFDKNGNGFIELDE 463

Query: 481 LKEVLLEDNAG-PNG-DQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRA 538
           LK  L +D  G  NG DQ I+DI  DVDL++DGRISF+EFKAMM SG DWKMASRQYSRA
Sbjct: 464 LKVALCDDKLGHANGNDQWIKDIFFDVDLNKDGRISFDEFKAMMKSGTDWKMASRQYSRA 523

Query: 539 MMSALSIKLFKD---------KSMELT---KSMEL-----NKSMELKKSVELKKSG 577
           +++ALSIK+FK+          SME     K  +L     NKSMEL+ S   K SG
Sbjct: 524 LLNALSIKMFKEDFGDNGPKSHSMEFPIARKRAKLLDAPKNKSMELQISKTYKPSG 579

May play a role in signal transduction pathways that involve calcium as a second messenger.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q38873|CDPK7_ARATH Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana GN=CPK7 PE=1 SV=1

 Score =  681 bits (1758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/531 (60%), Positives = 415/531 (78%), Gaps = 7/531 (1%)

Query: 26  NTASTNNKRNDASSKKPSPSPKHESV-SKHASNVDKKSISFQLRSVVSNPAEGNILDKYT 84
           N +S  N+     SK+  P  K+    S   +  D+    F+L SV+ +P   +I  +Y 
Sbjct: 7   NPSSATNQ-----SKQGKPKNKNNPFYSNEYATTDRSGAGFKL-SVLKDPTGHDISLQYD 60

Query: 85  FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNI 144
            G+E+GRGEFGIT+ C + ETGE YACK I+K+KL+T +DI+DVRREVEIM+H+PKHPN+
Sbjct: 61  LGREVGRGEFGITYLCTDKETGEKYACKSISKKKLRTAVDIEDVRREVEIMKHMPKHPNV 120

Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
           V+ K+++ED DA+++VMELCEGGELFDRIV +GHYTERAAAAV KTI+ +V++CH+ GVM
Sbjct: 121 VSLKDSFEDDDAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQICHKQGVM 180

Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEI 264
           HRDLKPENFLFA+  E S LKAIDFGLS+FFKPGEQF EIVGSPYYMAPEVLRRNYGPEI
Sbjct: 181 HRDLKPENFLFANKKETSALKAIDFGLSVFFKPGEQFNEIVGSPYYMAPEVLRRNYGPEI 240

Query: 265 DVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDP 324
           DVWSAGVI+YILLCGVPPFWAETE+G+A AIIR  IDF+RDPWP+VS  AK+LV+ ML+P
Sbjct: 241 DVWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPRVSDSAKDLVRKMLEP 300

Query: 325 NPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQD 384
           +P  RLT  +VLE+ WI N   APNVSLG  V +R+KQFS+MNK KK+ LRV+A++L  +
Sbjct: 301 DPKKRLTAAQVLEHTWILNAKKAPNVSLGETVKARLKQFSVMNKLKKRALRVIAEHLSVE 360

Query: 385 QMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDE 444
           + A IK+ F MMD +K G +  EELK GL   GQ+++D D+++LMEA DVDG+G L+  E
Sbjct: 361 EAAGIKEAFEMMDVNKRGKINLEELKYGLQKAGQQIADTDLQILMEATDVDGDGTLNYSE 420

Query: 445 FVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRD 504
           FV +SVHLK++ ND+ L +AF FFD+NQSG+IE+DEL+E L ++    + ++ I  I++D
Sbjct: 421 FVAVSVHLKKMANDEHLHKAFNFFDQNQSGYIEIDELREALNDELDNTSSEEVIAAIMQD 480

Query: 505 VDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSALSIKLFKDKSMEL 555
           VD D+DGRIS+EEF AMM +G DW+ ASRQYSR   ++LS+KL +D S++L
Sbjct: 481 VDTDKDGRISYEEFVAMMKAGTDWRKASRQYSRERFNSLSLKLMRDGSLQL 531

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q42438|CDPK8_ARATH Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana GN=CPK8 PE=1 SV=1

 Score =  674 bits (1739), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/522 (60%), Positives = 412/522 (78%), Gaps = 3/522 (0%)

Query: 35  NDASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEF 94
           ++  SKK  P  K       A   +     F+L SV+ +P   +I   Y  G+E+GRGEF
Sbjct: 10  SETGSKKGKPKIKSNPFYSEAYTTNGSGTGFKL-SVLKDPTGHDISLMYDLGREVGRGEF 68

Query: 95  GITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK 154
           GIT+ C +I+TGE YACK I+K+KL+T +DI+DVRREVEIM+H+P+HPNIV+ K+A+ED 
Sbjct: 69  GITYLCTDIKTGEKYACKSISKKKLRTAVDIEDVRREVEIMKHMPRHPNIVSLKDAFEDD 128

Query: 155 DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFL 214
           DA+++VMELCEGGELFDRIV +GHYTERAAAAV KTIL +V++CH++GVMHRDLKPENFL
Sbjct: 129 DAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTILEVVQICHKHGVMHRDLKPENFL 188

Query: 215 FADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIY 274
           FA+  E S LKAIDFGLS+FFKPGE F EIVGSPYYMAPEVLRRNYGPE+D+WSAGVI+Y
Sbjct: 189 FANKKETSALKAIDFGLSVFFKPGEGFNEIVGSPYYMAPEVLRRNYGPEVDIWSAGVILY 248

Query: 275 ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEE 334
           ILLCGVPPFWAETE+G+A AIIR  IDF+RDPWP+VS+ AK+LV+ ML+P+P  RL+  +
Sbjct: 249 ILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPRVSETAKDLVRKMLEPDPKKRLSAAQ 308

Query: 335 VLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFY 394
           VLE+ WI+N   APNVSLG  V +R+KQFS+MNK KK+ LRV+A++L  +++A IK+ F 
Sbjct: 309 VLEHSWIQNAKKAPNVSLGETVKARLKQFSVMNKLKKRALRVIAEHLSVEEVAGIKEAFE 368

Query: 395 MMDTDKNGDLTFEELKDGLNMIG-QKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLK 453
           MMD+ K G +  EELK GL+ +G Q++ D D+++LMEAADVDG+G L+  EFV +SVHLK
Sbjct: 369 MMDSKKTGKINLEELKFGLHKLGQQQIPDTDLQILMEAADVDGDGTLNYGEFVAVSVHLK 428

Query: 454 RIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRI 513
           ++ ND+ L +AF FFD+NQS +IE++EL+E  L D    N ++ +  I++DVD D+DGRI
Sbjct: 429 KMANDEHLHKAFSFFDQNQSDYIEIEELREA-LNDEVDTNSEEVVAAIMQDVDTDKDGRI 487

Query: 514 SFEEFKAMMTSGADWKMASRQYSRAMMSALSIKLFKDKSMEL 555
           S+EEF AMM +G DW+ ASRQYSR   ++LS+KL ++ S++L
Sbjct: 488 SYEEFAAMMKAGTDWRKASRQYSRERFNSLSLKLMREGSLQL 529

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q6NLQ6|CDPKW_ARATH Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana GN=CPK32 PE=1 SV=1

 Score =  649 bits (1675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 290/486 (59%), Positives = 391/486 (80%), Gaps = 2/486 (0%)

Query: 70  VVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR 129
           V+++P    I  KYT G+ELGRGEFG+T+ C + ET + +ACK I K+KL+T +DI+DVR
Sbjct: 50  VLNDPTGREIESKYTLGRELGRGEFGVTYLCTDKETDDVFACKSILKKKLRTAVDIEDVR 109

Query: 130 REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGK 189
           REVEIMRH+P+HPN+VT KE YED+ A++LVMELCEGGELFDRIV +GHYTERAAAAV K
Sbjct: 110 REVEIMRHMPEHPNVVTLKETYEDEHAVHLVMELCEGGELFDRIVARGHYTERAAAAVTK 169

Query: 190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
           TI+ +V+VCH++GVMHRDLKPENFLF +  E + LKAIDFGLS+FFKPGE+F EIVGSPY
Sbjct: 170 TIMEVVQVCHKHGVMHRDLKPENFLFGNKKETAPLKAIDFGLSVFFKPGERFNEIVGSPY 229

Query: 250 YMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
           YMAPEVL+RNYGPE+D+WSAGVI+YILLCGVPPFWAETE+G+A AIIR  +DF RDPWPK
Sbjct: 230 YMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVLDFRRDPWPK 289

Query: 310 VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKF 369
           VS+ AK+L++ MLDP+   RLT ++VL++PW++N   APNVSLG  V +R+KQF++MNK 
Sbjct: 290 VSENAKDLIRKMLDPDQKRRLTAQQVLDHPWLQNAKTAPNVSLGETVRARLKQFTVMNKL 349

Query: 370 KKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLM 429
           KK+ LRV+A++L  ++ + I++ F +MDT + G +  +ELK GL  +G  +   D+++LM
Sbjct: 350 KKRALRVIAEHLSDEEASGIREGFQIMDTSQRGKINIDELKIGLQKLGHAIPQDDLQILM 409

Query: 430 EAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDN 489
           +A D+D +G L CDEF+ +SVHL+++GND+ L +AF FFD+N +G+IE++EL+E  L D 
Sbjct: 410 DAGDIDRDGYLDCDEFIAISVHLRKMGNDEHLKKAFAFFDQNNNGYIEIEELREA-LSDE 468

Query: 490 AGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSALSIKLFK 549
            G   ++ +  I+RDVD D+DGRIS+EEF  MM +G DW+ ASRQYSR   +++S+KL +
Sbjct: 469 LG-TSEEVVDAIIRDVDTDKDGRISYEEFVTMMKTGTDWRKASRQYSRERFNSISLKLMQ 527

Query: 550 DKSMEL 555
           D S+++
Sbjct: 528 DASLQV 533

May play a role in signal transduction pathways that involve calcium as a second messenger. Functions as regulator of the calcium-mediated abscisic acid (ABA) signaling pathway. Phosphorylates ABA-responsive transcription factor ABF4 in vitro.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P93759|CDPKE_ARATH Calcium-dependent protein kinase 14 OS=Arabidopsis thaliana GN=CPK14 PE=2 SV=1

 Score =  637 bits (1643), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 292/485 (60%), Positives = 382/485 (78%), Gaps = 1/485 (0%)

Query: 70  VVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR 129
           V+  P    I  KY  G+ELGRGEFG+T+ C EIETGE +ACK I K+KLKT IDI+DV+
Sbjct: 41  VLKEPTGHEIKQKYKLGRELGRGEFGVTYLCTEIETGEIFACKSILKKKLKTSIDIEDVK 100

Query: 130 REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGK 189
           REVEIMR +P+HPNIVT KE YED  A++LVMELCEGGELFDRIV +GHYTERAAA+V K
Sbjct: 101 REVEIMRQMPEHPNIVTLKETYEDDKAVHLVMELCEGGELFDRIVARGHYTERAAASVIK 160

Query: 190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
           TI+ +V++CH++GVMHRDLKPENFLFA+  E + LKAIDFGLS+FFKPGE+F EIVGSPY
Sbjct: 161 TIIEVVQMCHKHGVMHRDLKPENFLFANKKETASLKAIDFGLSVFFKPGERFNEIVGSPY 220

Query: 250 YMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
           YMAPEVLRR+YG EID+WSAGVI+YILLCGVPPFWAETE G+A AI++  IDF+RDPWPK
Sbjct: 221 YMAPEVLRRSYGQEIDIWSAGVILYILLCGVPPFWAETEHGVAKAILKSVIDFKRDPWPK 280

Query: 310 VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKF 369
           VS  AK+L+K ML P+P  RLT ++VL++PWI+N  +A NVSLG  V +R+KQFS+MNK 
Sbjct: 281 VSDNAKDLIKKMLHPDPRRRLTAQQVLDHPWIQNGKNASNVSLGETVRARLKQFSVMNKL 340

Query: 370 KKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLM 429
           KK+ LRV+A++L  ++ + IK+ F +MDT   G +T  EL  GL  +G  V   D+++LM
Sbjct: 341 KKRALRVIAEHLSVEETSCIKERFQVMDTSNRGKITITELGIGLQKLGIVVPQDDIQILM 400

Query: 430 EAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDN 489
           +A DVD +G L  +EFV +SVH++++GND+ L +AF FFDKN+SG+IE++EL++  L D+
Sbjct: 401 DAGDVDKDGYLDVNEFVAISVHIRKLGNDEHLKKAFTFFDKNKSGYIEIEELRDA-LADD 459

Query: 490 AGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSALSIKLFK 549
                ++ +  I+ DVD ++DG+IS++EF  MM +G DW+ ASRQYSR +   LS+KL +
Sbjct: 460 VDTTSEEVVEAIILDVDTNKDGKISYDEFATMMKTGTDWRKASRQYSRDLFKCLSLKLMQ 519

Query: 550 DKSME 554
           D S++
Sbjct: 520 DGSLQ 524

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M9V8|CDPKA_ARATH Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana GN=CPK10 PE=1 SV=1

 Score =  637 bits (1643), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 300/493 (60%), Positives = 384/493 (77%), Gaps = 1/493 (0%)

Query: 67  LRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDID 126
           L+ V+    +  I DKY  G+ELGRGEFGIT+ C + ET E  ACK I+K KL+T +DI+
Sbjct: 47  LKDVIPMSNQTQISDKYILGRELGRGEFGITYLCTDRETHEALACKSISKRKLRTAVDIE 106

Query: 127 DVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           DVRREV IM  LP+HPN+V  K +YED + ++LVMELCEGGELFDRIV +GHYTERAAAA
Sbjct: 107 DVRREVAIMSTLPEHPNVVKLKASYEDNENVHLVMELCEGGELFDRIVARGHYTERAAAA 166

Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVG 246
           V +TI  +V +CH NGVMHRDLKPENFLFA+  ENS LKAIDFGLS+FFKPG++F EIVG
Sbjct: 167 VARTIAEVVMMCHSNGVMHRDLKPENFLFANKKENSPLKAIDFGLSVFFKPGDKFTEIVG 226

Query: 247 SPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP 306
           SPYYMAPEVL+R+YGP +DVWSAGVIIYILLCGVPPFWAETE+G+A AI+RG +DF+RDP
Sbjct: 227 SPYYMAPEVLKRDYGPGVDVWSAGVIIYILLCGVPPFWAETEQGVALAILRGVLDFKRDP 286

Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIM 366
           WP++S+ AK LVK MLDP+P  RLT ++VL +PWI+N   APNV LG  V SR+KQFS+M
Sbjct: 287 WPQISESAKSLVKQMLDPDPTKRLTAQQVLAHPWIQNAKKAPNVPLGDIVRSRLKQFSMM 346

Query: 367 NKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVK 426
           N+FKKKVLRV+A++L   ++  IK MF +MD DK+G +T+ ELK GL  +G ++ +P++K
Sbjct: 347 NRFKKKVLRVIAEHLSIQEVEVIKNMFSLMDDDKDGKITYPELKAGLQKVGSQLGEPEIK 406

Query: 427 MLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLL 486
           MLME ADVDGNG L   EFV + +HL++I ND++   AF FFDK+ S +IE+DEL+E L 
Sbjct: 407 MLMEVADVDGNGFLDYGEFVAVIIHLQKIENDELFKLAFMFFDKDGSTYIELDELREALA 466

Query: 487 EDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSALSIK 546
           ++   P+    + DI+R+VD D+DGRI+++EF  MM +G DW+ ASRQYSR    +LSI 
Sbjct: 467 DELGEPDA-SVLSDIMREVDTDKDGRINYDEFVTMMKAGTDWRKASRQYSRERFKSLSIN 525

Query: 547 LFKDKSMELTKSM 559
           L KD S+ L  ++
Sbjct: 526 LMKDGSLHLHDAL 538

May play a role in signal transduction pathways that involve calcium as a second messenger. May be a positive regulator controlling stress signal transduction.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SSF8|CDPKU_ARATH Calcium-dependent protein kinase 30 OS=Arabidopsis thaliana GN=CPK30 PE=1 SV=1

 Score =  626 bits (1615), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 300/559 (53%), Positives = 402/559 (71%), Gaps = 25/559 (4%)

Query: 1   MGSCISLARKGAFFSKKSQAIGNIDNTASTNNKRNDASSKKPSPSPKHESVSKHASNVDK 60
           MG+CI+  +             + DN+   N K+     ++ +P    + +  HA     
Sbjct: 1   MGNCIACVK------------FDPDNS-KPNQKKKPPRGRQRNPYDDPDGLRTHAP---- 43

Query: 61  KSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK 120
                 LR V+    +  I DKY  G+ELGRGEFGIT+ C + ET E  ACK I+K KL+
Sbjct: 44  ------LR-VIPMSHQSQISDKYILGRELGRGEFGITYLCTDRETREALACKSISKRKLR 96

Query: 121 TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYT 180
           T +D++DVRREV IM  LP+HPN+V  K  YED + ++LVMELCEGGELFDRIV +GHYT
Sbjct: 97  TAVDVEDVRREVTIMSTLPEHPNVVKLKATYEDNENVHLVMELCEGGELFDRIVARGHYT 156

Query: 181 ERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ 240
           ERAAA V +TI  +V++CH NGVMHRDLKPENFLFA+  ENS LKAIDFGLS+ FKPGE+
Sbjct: 157 ERAAATVARTIAEVVRMCHVNGVMHRDLKPENFLFANKKENSALKAIDFGLSVLFKPGER 216

Query: 241 FCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI 300
           F EIVGSPYYMAPEVL+RNYGPE+DVWSAGVI+YILLCGVPPFWAETE+G+A AI+RG +
Sbjct: 217 FTEIVGSPYYMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVALAILRGVL 276

Query: 301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           DF+RDPW ++S+ AK LVK ML+P+   RLT ++VL++PWI+N   APNV LG  V SR+
Sbjct: 277 DFKRDPWSQISESAKSLVKQMLEPDSTKRLTAQQVLDHPWIQNAKKAPNVPLGDIVRSRL 336

Query: 361 KQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV 420
           KQFS+MN+ KKK LRV+A++L   ++  I+ MF +MD D +G +++ EL+ GL  +G ++
Sbjct: 337 KQFSMMNRLKKKALRVIAEHLSIQEVEVIRNMFTLMDDDNDGKISYLELRAGLRKVGSQL 396

Query: 421 SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDE 480
            +P++K+LME ADV+GNG L   EFV + +HL+++ ND+   QAF FFDK+ SG+IE +E
Sbjct: 397 GEPEIKLLMEVADVNGNGCLDYGEFVAVIIHLQKMENDEHFRQAFMFFDKDGSGYIESEE 456

Query: 481 LKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMM 540
           L+E L ++   P+ +  I DI+R+VD D+DG+I+++EF  MM +G DW+ ASRQYSR   
Sbjct: 457 LREALTDELGEPD-NSVIIDIMREVDTDKDGKINYDEFVVMMKAGTDWRKASRQYSRERF 515

Query: 541 SALSIKLFKDKSMELTKSM 559
            +LS+ L KD SM L  ++
Sbjct: 516 KSLSLNLMKDGSMHLHDAL 534

May play a role in signal transduction pathways that involve calcium as a second messenger. May be a positive regulator controlling stress signal transduction. Acts as a calcium sensor involved in the hormone-signaling pathways.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8W4I7|CDPKD_ARATH Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana GN=CPK13 PE=1 SV=2

 Score =  618 bits (1594), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 296/508 (58%), Positives = 387/508 (76%), Gaps = 5/508 (0%)

Query: 48  HESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGE 107
           H+   K A+   KKS   +   V+S+  + NI D+Y   +ELGRGEFG+T+ C E  + +
Sbjct: 23  HDHARKDAAG-GKKSAPIR---VLSDVPKENIEDRYLLDRELGRGEFGVTYLCIERSSRD 78

Query: 108 TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGG 167
             ACK I+K KL+T +DI+DV+REV IM+HLPK  +IVT KEA ED +A++LVMELCEGG
Sbjct: 79  LLACKSISKRKLRTAVDIEDVKREVAIMKHLPKSSSIVTLKEACEDDNAVHLVMELCEGG 138

Query: 168 ELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI 227
           ELFDRIV +GHYTERAAA V KTI+ +V++CH++GV+HRDLKPENFLFA+  ENS LKAI
Sbjct: 139 ELFDRIVARGHYTERAAAGVTKTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAI 198

Query: 228 DFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAET 287
           DFGLSIFFKPGE+F EIVGSPYYMAPEVL+RNYGPEID+WSAGVI+YILLCGVPPFWAE+
Sbjct: 199 DFGLSIFFKPGEKFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAES 258

Query: 288 EEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHA 347
           E+G+A AI+RG IDF+R+PWP +S+ AK LV+ ML+P+P  RLT ++VLE+PWI+N   A
Sbjct: 259 EQGVAQAILRGVIDFKREPWPNISETAKNLVRQMLEPDPKRRLTAKQVLEHPWIQNAKKA 318

Query: 348 PNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFE 407
           PNV LG  V SR+KQFS+MN+FK+K LRV+A+ L  +++  IK MF  MDTD +G ++ E
Sbjct: 319 PNVPLGDVVKSRLKQFSVMNRFKRKALRVIAEFLSTEEVEDIKVMFNKMDTDNDGIVSIE 378

Query: 408 ELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRF 467
           ELK GL     ++++ +V+ML+EA D  G G L   EFV +S+HL+++ ND+ L +AF +
Sbjct: 379 ELKAGLRDFSTQLAESEVQMLIEAVDTKGKGTLDYGEFVAVSLHLQKVANDEHLRKAFSY 438

Query: 468 FDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGAD 527
           FDK+ +G+I   EL + L ED  G +      DI ++VD D+DGRIS+EEF AMM +G D
Sbjct: 439 FDKDGNGYILPQELCDALKED-GGDDCVDVANDIFQEVDTDKDGRISYEEFAAMMKTGTD 497

Query: 528 WKMASRQYSRAMMSALSIKLFKDKSMEL 555
           W+ ASR YSR   ++LSIKL KD S+ L
Sbjct: 498 WRKASRHYSRGRFNSLSIKLMKDGSLNL 525

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FMP5|CDPKH_ARATH Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1

 Score =  542 bits (1396), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 269/526 (51%), Positives = 359/526 (68%), Gaps = 14/526 (2%)

Query: 1   MGSCISLARKGAFFSKKSQAIGNIDNTASTNNKRNDASSKKPSPSPKHESVSKHASNVDK 60
           MG+C S  R  A           ++N AS +N  N       +  P+    SKHA     
Sbjct: 1   MGNCCSHGRDSADNGDA------LENGASASNAANSTGPTAEASVPQ----SKHAPPSPP 50

Query: 61  KSI-SFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL 119
            +     +  V+  P E ++   Y+ GKELGRG+FG+TH C +  TG  +ACK IAK KL
Sbjct: 51  PATKQGPIGPVLGRPME-DVKASYSLGKELGRGQFGVTHLCTQKATGHQFACKTIAKRKL 109

Query: 120 KTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY 179
             + DI+DVRREV+IM HL   PNIV  K AYEDK +++LVMELC GGELFDRI+ KGHY
Sbjct: 110 VNKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHY 169

Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           +ERAAA++ +TI++IV  CH  GV+HRDLKPENFL  +  ENS LKA DFGLS+F+KPGE
Sbjct: 170 SERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKPGE 229

Query: 240 QFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK 299
            F +IVGS YY+APEVL+R YGPE D+WS GV++YILLCGVPPFWAE+E GI +AI+RG 
Sbjct: 230 VFKDIVGSAYYIAPEVLKRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILRGH 289

Query: 300 IDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSR 359
           +DF  DPWP +S +AK+LVK ML+ +P  RLT  +VL +PWIK D  AP+V L   V SR
Sbjct: 290 VDFSSDPWPSISPQAKDLVKKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSR 349

Query: 360 IKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQK 419
           +KQF  MN FKK  LRV+A  L ++++  +K+MF  MDTD +G +T EEL+ GL   G +
Sbjct: 350 LKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQGTR 409

Query: 420 VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVD 479
           +S+ +V+ LMEAAD DGNG +   EF+  ++H+ R+  ++ L  AF+ FDK+ SG+I ++
Sbjct: 410 LSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITME 469

Query: 480 ELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG 525
           EL++ L E   G N  + I++I+ +VD D DGRI+++EF AMM  G
Sbjct: 470 ELEQALRE--FGMNDGRDIKEIISEVDGDNDGRINYDEFVAMMRKG 513

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q3E9C0|CDPKY_ARATH Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1

 Score =  532 bits (1370), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 253/456 (55%), Positives = 333/456 (73%), Gaps = 3/456 (0%)

Query: 70  VVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR 129
           V+  P E ++   YT GKELGRG+FG+TH C +  TG  +ACK IAK KL  + DI+DVR
Sbjct: 56  VLGRPME-DVKSSYTLGKELGRGQFGVTHLCTQKATGLQFACKTIAKRKLVNKEDIEDVR 114

Query: 130 REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGK 189
           REV+IM HL   PNIV  K AYEDK +++LVMELC GGELFDRI+ KGHY+ERAAA++ +
Sbjct: 115 REVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYSERAAASLLR 174

Query: 190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
           TI++I+  CH  GV+HRDLKPENFL     ENS LKA DFGLS+F+KPGE F +IVGS Y
Sbjct: 175 TIVQIIHTCHSMGVIHRDLKPENFLLLSKDENSPLKATDFGLSVFYKPGEVFKDIVGSAY 234

Query: 250 YMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
           Y+APEVLRR YGPE D+WS GV++YILLCGVPPFWAE+E GI +AI+ G++DF  DPWP 
Sbjct: 235 YIAPEVLRRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILSGQVDFSSDPWPV 294

Query: 310 VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKF 369
           +S +AK+LV+ ML+ +P  RLT  +VL +PWIK D  AP+V L   V SR+KQF  MN F
Sbjct: 295 ISPQAKDLVRKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQFKAMNNF 354

Query: 370 KKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLM 429
           KK  LRV+A  L ++++  +K+MF  MDTD +G +T EEL+ GL   G ++S+ +V+ LM
Sbjct: 355 KKVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEELRQGLAKQGTRLSEYEVQQLM 414

Query: 430 EAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDN 489
           EAAD DGNG +   EF+  ++H+ R+  ++ L  AF+ FDK+ SG+I  +EL++ L E  
Sbjct: 415 EAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITTEELEQALRE-- 472

Query: 490 AGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG 525
            G N  + I++I+ +VD D DGRI++EEF AMM  G
Sbjct: 473 FGMNDGRDIKEIISEVDGDNDGRINYEEFVAMMRKG 508

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	586
224093160	529	calcium dependent protein kinase 24 [Pop	0.902	1.0	0.687	0.0
255585683	533	calcium-dependent protein kinase, putati	0.853	0.938	0.744	0.0
297743764	576	unnamed protein product [Vitis vinifera]	0.894	0.909	0.703	0.0
449469192	527	PREDICTED: calcium-dependent protein kin	0.894	0.994	0.674	0.0
297822897	582	calcium-dependent protein kinase 24 [Ara	0.955	0.962	0.656	0.0
225433850	554	PREDICTED: calcium-dependent protein kin	0.894	0.945	0.703	0.0
15225092	582	calcium-dependent protein kinase 24 [Ara	0.955	0.962	0.656	0.0
116831129	583	unknown [Arabidopsis thaliana]	0.955	0.960	0.656	0.0
26450847	582	putative calcium-dependent protein kinas	0.955	0.962	0.654	0.0
73487204	536	calcium-dependent protein kinase 2 [Petu	0.911	0.996	0.650	0.0

>gi|224093160|ref|XP_002309814.1| calcium dependent protein kinase 24 [Populus trichocarpa] gi|222852717|gb|EEE90264.1| calcium dependent protein kinase 24 [Populus trichocarpa]

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/551 (68%), Positives = 454/551 (82%), Gaps = 22/551 (3%)

Query: 1   MGSCISLARKGAFFSKKSQAIGNIDNTASTNNKRNDASSKKPSPSPKHESVSKHASNVDK 60
           MGSC+S              +G I +  S++N R      KP PSP          +V +
Sbjct: 1   MGSCVSTPAN----------LGQIISKRSSHNVR------KPLPSPDQND------SVVQ 38

Query: 61  KSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK 120
              + Q+ SV+  P   NI +KYTFGKELGRGEFGIT+ CF+I+TGE YACK I+K KLK
Sbjct: 39  TPRALQIASVIKEPTGHNIHEKYTFGKELGRGEFGITYHCFDIKTGEKYACKTISKSKLK 98

Query: 121 TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYT 180
           +EID++DVRREVEIMRHLPKHPNIV+++EAYED+DA++LVMELCEGGELFDRI++KGHY+
Sbjct: 99  SEIDVEDVRREVEIMRHLPKHPNIVSFREAYEDRDAVHLVMELCEGGELFDRIISKGHYS 158

Query: 181 ERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ 240
           ERAAA V KTIL IVKVCH++GV+HRDLKPENFLFAD SE+SQLKAIDFGLSIFF+PG++
Sbjct: 159 ERAAAMVTKTILEIVKVCHDHGVIHRDLKPENFLFADASESSQLKAIDFGLSIFFEPGQR 218

Query: 241 FCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI 300
           F EIVGSPYYMAPE+LRRNYGPE+DVWS GVI+YILLCGVPPFWAETEEGIAHAI+RG+I
Sbjct: 219 FREIVGSPYYMAPEILRRNYGPEVDVWSTGVILYILLCGVPPFWAETEEGIAHAIVRGEI 278

Query: 301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           DF RDPWPKVS+E K++VK MLD NPYNRLT+EEVLENPWI+N +  PN+SLG NV ++I
Sbjct: 279 DFARDPWPKVSEEGKDIVKKMLDQNPYNRLTVEEVLENPWIQNASDVPNISLGENVRTKI 338

Query: 361 KQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV 420
           KQFS+MN+FKKK LRVVAD+LP +Q+ +IKQMF+MMDTD NGDL+F+ELKDGLN  G  V
Sbjct: 339 KQFSLMNRFKKKALRVVADSLPDEQVDKIKQMFHMMDTDHNGDLSFQELKDGLNKFGHSV 398

Query: 421 SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDE 480
            DPDVK+LM+AAD DGNG LSC+EFV +SVHLKRI +D  L+QAFRFFDK+Q+GFIE DE
Sbjct: 399 PDPDVKLLMDAADADGNGSLSCEEFVAVSVHLKRISSDKHLTQAFRFFDKDQNGFIEFDE 458

Query: 481 LKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMM 540
           L+E +  D+ GPN +Q I+DI+ DVDLD+DGRIS+ EFKAMM SG DWKM SRQYSRAMM
Sbjct: 459 LREAMSNDDLGPNNEQVIKDIIFDVDLDKDGRISYNEFKAMMKSGLDWKMGSRQYSRAMM 518

Query: 541 SALSIKLFKDK 551
            ALSI L K++
Sbjct: 519 KALSINLLKNE 529

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255585683|ref|XP_002533526.1| calcium-dependent protein kinase, putative [Ricinus communis] gi|223526608|gb|EEF28856.1| calcium-dependent protein kinase, putative [Ricinus communis]

 Score =  801 bits (2068), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/500 (74%), Positives = 437/500 (87%)

Query: 56  SNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIA 115
           S   +   +FQ+ +V+ +PA  NI  KY FGKELGRGEFG+T++C   ETGETYACK I+
Sbjct: 32  SAASQPCTNFQVGNVLKSPAGNNIRQKYEFGKELGRGEFGVTYRCLHKETGETYACKTIS 91

Query: 116 KEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVN 175
           K KLKTEID++DVRREVEIMRHLPKHPNIV+YKEAYEDK+ IYLVMELCEGGELFDRIV 
Sbjct: 92  KAKLKTEIDVEDVRREVEIMRHLPKHPNIVSYKEAYEDKEVIYLVMELCEGGELFDRIVA 151

Query: 176 KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF 235
           KGHYTERAAA V KTIL IVKVCH++GV+HRDLKPENFLFAD  ENSQLKAIDFGLSIFF
Sbjct: 152 KGHYTERAAAMVTKTILEIVKVCHKHGVIHRDLKPENFLFADVHENSQLKAIDFGLSIFF 211

Query: 236 KPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAI 295
           +PG++F EIVGSPYYMAPEVLRRNYGPE+DVWSAGVI+YILLCGVPPFWAETEEGIAHAI
Sbjct: 212 QPGQRFSEIVGSPYYMAPEVLRRNYGPEVDVWSAGVILYILLCGVPPFWAETEEGIAHAI 271

Query: 296 IRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGN 355
           + GKIDF RDPWP+VS+EAK+LV+NMLD NPY+RLT++EVLE+PWI N +  PNV+LG N
Sbjct: 272 VGGKIDFTRDPWPRVSEEAKDLVQNMLDQNPYSRLTVQEVLEHPWIHNASDVPNVNLGEN 331

Query: 356 VTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNM 415
           V +RIKQFS+MNKFKK+VLRVVADNL  +Q+  IKQMF+MMDTD  GDLTFEELK GL+ 
Sbjct: 332 VRARIKQFSLMNKFKKRVLRVVADNLTDEQVDGIKQMFHMMDTDNTGDLTFEELKSGLHK 391

Query: 416 IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGF 475
           IG  V DPDV+ LM+AAD+DGNG LS +EFV MS+HL +IGND+ LSQAF+FFDKNQ+G+
Sbjct: 392 IGHPVPDPDVRTLMDAADIDGNGTLSIEEFVAMSIHLIKIGNDEHLSQAFKFFDKNQTGY 451

Query: 476 IEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQY 535
           IE +EL++ ++ DN GPN ++ I+DI+ DVDLD+DGRISF+EFKAMM SG DWKMASRQY
Sbjct: 452 IEFEELRDAMVHDNLGPNCEEVIKDIMSDVDLDKDGRISFDEFKAMMKSGMDWKMASRQY 511

Query: 536 SRAMMSALSIKLFKDKSMEL 555
           SRAM++ALS+KL KD SM+L
Sbjct: 512 SRAMLNALSMKLLKDGSMQL 531

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297743764|emb|CBI36647.3| unnamed protein product [Vitis vinifera]

 Score =  791 bits (2044), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/527 (70%), Positives = 454/527 (86%), Gaps = 3/527 (0%)

Query: 51  VSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYA 110
           + +   +V +KS++ +  SV+  P+  +I   Y  GKELGRGEFG+THQCF++ETGE +A
Sbjct: 45  IPESGDDVFRKSVTIRPISVLKEPSGKDIYKTYRLGKELGRGEFGVTHQCFDLETGEIFA 104

Query: 111 CKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELF 170
           CK I+K KL TEIDI DVRREVEIM+HLPKHPNIV  KEAYEDKD ++LVMELCEGGELF
Sbjct: 105 CKTISKSKLTTEIDIQDVRREVEIMKHLPKHPNIVRLKEAYEDKDNVHLVMELCEGGELF 164

Query: 171 DRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           DRIV +GHYTERAAA V ++I+ I+++CH++GVMHRDLKPENFLFAD SE S LKAIDFG
Sbjct: 165 DRIVARGHYTERAAADVTRSIVEILQICHQHGVMHRDLKPENFLFADASEASPLKAIDFG 224

Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEG 290
           LSIFFKPG++F EIVGSPYYMAPEVLRR+YGPE+DVWSAGVI+YILLCGVPPFWAETEEG
Sbjct: 225 LSIFFKPGQRFNEIVGSPYYMAPEVLRRHYGPEVDVWSAGVILYILLCGVPPFWAETEEG 284

Query: 291 IAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNV 350
           IA AI++  +DFERDPWP VS++AK+LV++MLDPNPYNRLT+EEVL +PWIKN    PNV
Sbjct: 285 IAQAIVKSVVDFERDPWPHVSEDAKDLVRSMLDPNPYNRLTVEEVLAHPWIKNATSIPNV 344

Query: 351 SLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELK 410
           SLG NV +RIKQFS+MNKFKK+VLRVVADNLP +Q   I+Q+F+MMDTDKNG+L+FEELK
Sbjct: 345 SLGENVRTRIKQFSLMNKFKKRVLRVVADNLPNEQRDGIRQIFHMMDTDKNGNLSFEELK 404

Query: 411 DGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDK 470
           DGL+ IG  V+DPDVKML+EAAD+DG G L+CDEFVT+SVHL++I +D+ LS+AFR FDK
Sbjct: 405 DGLHKIGHPVADPDVKMLIEAADMDGTGTLNCDEFVTISVHLRKISSDENLSEAFRAFDK 464

Query: 471 NQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKM 530
           N SG+IE +EL+E L EDN GPN +Q I+DI+ DVDLD+DGRIS++EFKAMM +G DWKM
Sbjct: 465 NDSGYIEFEELREALREDNLGPNNEQVIQDIIFDVDLDKDGRISYDEFKAMMKTGMDWKM 524

Query: 531 ASRQYSRAMMSALSIKLFKDKSMEL-TKSMEL-NKSMELK-KSVELK 574
           +SRQYSRAM++ALS+++FKDKSM L  KSM+L N+SM LK +S+ L+
Sbjct: 525 SSRQYSRAMLNALSMRIFKDKSMPLQNKSMQLENRSMLLKNRSMRLQ 571

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469192|ref|XP_004152305.1| PREDICTED: calcium-dependent protein kinase 24-like [Cucumis sativus] gi|449484847|ref|XP_004156997.1| PREDICTED: calcium-dependent protein kinase 24-like [Cucumis sativus]

 Score =  791 bits (2044), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/556 (67%), Positives = 460/556 (82%), Gaps = 32/556 (5%)

Query: 1   MGSCISLARKGAFFSKKSQAIGNIDNTASTNNKRNDASSKKPSPSPKHESVSKHASNVDK 60
           MGSC+S+  +   FSK+++ I  + + A   + R              +S  +HA+    
Sbjct: 1   MGSCVSIQARPGSFSKRTKDINTLPDHAFIESVR--------------KSSVRHAA---- 42

Query: 61  KSISFQLRSVVSNPAEG-NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL 119
                   S++S+ + G NI +KY FGKELGRGEFGITHQCF+IETG+T+ACK I+K KL
Sbjct: 43  --------SILSHDSTGDNIFEKYRFGKELGRGEFGITHQCFDIETGDTFACKTISKSKL 94

Query: 120 KTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY 179
           ++EI+++DVRREV IMR LPKHPNIVT+KEA+ED +A+Y VMELCEGGELFDRIV+KGHY
Sbjct: 95  RSEINVEDVRREVAIMRSLPKHPNIVTFKEAFEDNEAVYFVMELCEGGELFDRIVSKGHY 154

Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           TERAAA V KTI+ I K+CHENGV+HRDLKPENFLFAD SENSQLKAIDFGLSIFF+P +
Sbjct: 155 TERAAANVTKTIIEICKLCHENGVIHRDLKPENFLFADESENSQLKAIDFGLSIFFEPDQ 214

Query: 240 QFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK 299
           +F EIVGSPYYMAPEVLRR+YGPEIDVWSAGVI+YILLCGVPPFWAE+EEGIAHAI+RG 
Sbjct: 215 RFGEIVGSPYYMAPEVLRRSYGPEIDVWSAGVILYILLCGVPPFWAESEEGIAHAIVRGN 274

Query: 300 IDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSR 359
           IDFERDPWPKVSKEAKELV  MLDPNPYNR+T+EEVL +PWI+N N A NVSLG NV  R
Sbjct: 275 IDFERDPWPKVSKEAKELVVGMLDPNPYNRMTVEEVLGHPWIQNKNQARNVSLGENVGIR 334

Query: 360 IKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQK 419
           IKQF++MNKFKKKVLRVVAD+L  +QM  I++MF+MMDTDKNGDLTFEELK+GL+MIG  
Sbjct: 335 IKQFTLMNKFKKKVLRVVADHLSDEQMEGIRRMFHMMDTDKNGDLTFEELKNGLHMIGHS 394

Query: 420 VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVD 479
           + DPDV+MLM+AAD+DGNG LSC+EF TMS+HL+++  D++L+QAF FFDK+Q+G+IE D
Sbjct: 395 LPDPDVRMLMDAADLDGNGTLSCEEFATMSIHLRKMSTDELLTQAFSFFDKDQNGYIEYD 454

Query: 480 ELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAM 539
           EL+E L++DN     ++ I+DI+ DVD D+DGRIS+ EFKAM+T+G DWKM+SRQYSRAM
Sbjct: 455 ELREALMDDN-----EKVIQDIISDVDSDKDGRISYNEFKAMLTTGMDWKMSSRQYSRAM 509

Query: 540 MSALSIKLFKDKSMEL 555
           + ALS+KLFKDKS+ +
Sbjct: 510 LHALSLKLFKDKSVAV 525

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297822897|ref|XP_002879331.1| calcium-dependent protein kinase 24 [Arabidopsis lyrata subsp. lyrata] gi|297325170|gb|EFH55590.1| calcium-dependent protein kinase 24 [Arabidopsis lyrata subsp. lyrata]

 Score =  791 bits (2043), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/596 (65%), Positives = 476/596 (79%), Gaps = 36/596 (6%)

Query: 1   MGSCISLARKGAFFSKKSQAIGNIDNTASTNNKRNDASSKKPSPSPKHESVSKHASNVDK 60
           MGSC+S   KG+ F K+               +R  +S+ + S  P+ +S    ++N+ +
Sbjct: 1   MGSCVSSPLKGSPFGKRPV-------------RRRHSSNSRTSSVPRFDS----STNLSR 43

Query: 61  KSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK 120
           + I      V+  P    I  KY  GKELGRGEFG+TH+C EI T E +ACK+I+KEKL+
Sbjct: 44  RLIFQPPSRVLPEPIGDGIHLKYDLGKELGRGEFGVTHECIEISTRERFACKRISKEKLR 103

Query: 121 TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYT 180
           TEID++DVRREVEIMR LPKHPNIV++KEA+EDKDA+YLVME+CEGGELFDRIV++GHYT
Sbjct: 104 TEIDVEDVRREVEIMRCLPKHPNIVSFKEAFEDKDAVYLVMEICEGGELFDRIVSRGHYT 163

Query: 181 ERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ 240
           ERAAA+V KTIL +VKVCHE+GV+HRDLKPENFLF++G+E +QLKAIDFGLSIFFKP ++
Sbjct: 164 ERAAASVAKTILEVVKVCHEHGVIHRDLKPENFLFSNGTETAQLKAIDFGLSIFFKPAQR 223

Query: 241 FCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI 300
           F EIVGSPYYMAPEVLRRNYGPEIDVWSAGVI+YILLCGVPPFWAETEEGIAHAI+RG I
Sbjct: 224 FNEIVGSPYYMAPEVLRRNYGPEIDVWSAGVILYILLCGVPPFWAETEEGIAHAIVRGNI 283

Query: 301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           DFERDPWPKVS+EAKELVKNMLD NPY+RLT++EVLE+PWI+N + APNV+LG NV ++I
Sbjct: 284 DFERDPWPKVSREAKELVKNMLDANPYSRLTVQEVLEHPWIRNADRAPNVNLGDNVRTKI 343

Query: 361 KQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV 420
           +QF +MN+FKKKVLR+VADNLP +++A I QMF  MDTDKNG LTFEEL+DGL  IGQ V
Sbjct: 344 QQFLLMNRFKKKVLRIVADNLPNEEIAAIVQMFQTMDTDKNGHLTFEELRDGLKKIGQVV 403

Query: 421 SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDE 480
            D DVKMLM+AAD DGNG+LSC+EFVT+S+HLKR+G D+ L +AF++FDKN++GFIE+DE
Sbjct: 404 PDGDVKMLMDAADTDGNGMLSCEEFVTLSIHLKRMGCDEHLQEAFKYFDKNRNGFIELDE 463

Query: 481 LKEVLLEDNAGP-NG-DQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRA 538
           LKE L +D  G  NG DQ I+DI  DVDL++DGRISF+EFKAMM SG DWKMASRQYSRA
Sbjct: 464 LKEALCDDKLGHGNGNDQWIKDIFFDVDLNKDGRISFDEFKAMMKSGTDWKMASRQYSRA 523

Query: 539 MMSALSIKLFKD---------KSMELT---KSMEL-----NKSMELKKSVELKKSG 577
           +++ALSIK+FK+          SME     K  +L     NKSMEL+ S   K SG
Sbjct: 524 LLNALSIKMFKEDFGDNGPKAHSMEFPIARKRAKLLDAPKNKSMELQVSKTYKPSG 579

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225433850|ref|XP_002264388.1| PREDICTED: calcium-dependent protein kinase 24 [Vitis vinifera]

 Score =  790 bits (2040), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/527 (70%), Positives = 454/527 (86%), Gaps = 3/527 (0%)

Query: 51  VSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYA 110
           + +   +V +KS++ +  SV+  P+  +I   Y  GKELGRGEFG+THQCF++ETGE +A
Sbjct: 23  IPESGDDVFRKSVTIRPISVLKEPSGKDIYKTYRLGKELGRGEFGVTHQCFDLETGEIFA 82

Query: 111 CKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELF 170
           CK I+K KL TEIDI DVRREVEIM+HLPKHPNIV  KEAYEDKD ++LVMELCEGGELF
Sbjct: 83  CKTISKSKLTTEIDIQDVRREVEIMKHLPKHPNIVRLKEAYEDKDNVHLVMELCEGGELF 142

Query: 171 DRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           DRIV +GHYTERAAA V ++I+ I+++CH++GVMHRDLKPENFLFAD SE S LKAIDFG
Sbjct: 143 DRIVARGHYTERAAADVTRSIVEILQICHQHGVMHRDLKPENFLFADASEASPLKAIDFG 202

Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEG 290
           LSIFFKPG++F EIVGSPYYMAPEVLRR+YGPE+DVWSAGVI+YILLCGVPPFWAETEEG
Sbjct: 203 LSIFFKPGQRFNEIVGSPYYMAPEVLRRHYGPEVDVWSAGVILYILLCGVPPFWAETEEG 262

Query: 291 IAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNV 350
           IA AI++  +DFERDPWP VS++AK+LV++MLDPNPYNRLT+EEVL +PWIKN    PNV
Sbjct: 263 IAQAIVKSVVDFERDPWPHVSEDAKDLVRSMLDPNPYNRLTVEEVLAHPWIKNATSIPNV 322

Query: 351 SLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELK 410
           SLG NV +RIKQFS+MNKFKK+VLRVVADNLP +Q   I+Q+F+MMDTDKNG+L+FEELK
Sbjct: 323 SLGENVRTRIKQFSLMNKFKKRVLRVVADNLPNEQRDGIRQIFHMMDTDKNGNLSFEELK 382

Query: 411 DGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDK 470
           DGL+ IG  V+DPDVKML+EAAD+DG G L+CDEFVT+SVHL++I +D+ LS+AFR FDK
Sbjct: 383 DGLHKIGHPVADPDVKMLIEAADMDGTGTLNCDEFVTISVHLRKISSDENLSEAFRAFDK 442

Query: 471 NQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKM 530
           N SG+IE +EL+E L EDN GPN +Q I+DI+ DVDLD+DGRIS++EFKAMM +G DWKM
Sbjct: 443 NDSGYIEFEELREALREDNLGPNNEQVIQDIIFDVDLDKDGRISYDEFKAMMKTGMDWKM 502

Query: 531 ASRQYSRAMMSALSIKLFKDKSMEL-TKSMEL-NKSMELK-KSVELK 574
           +SRQYSRAM++ALS+++FKDKSM L  KSM+L N+SM LK +S+ L+
Sbjct: 503 SSRQYSRAMLNALSMRIFKDKSMPLQNKSMQLENRSMLLKNRSMRLQ 549

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15225092|ref|NP_180708.1| calcium-dependent protein kinase 24 [Arabidopsis thaliana] gi|75337280|sp|Q9SIQ7.1|CDPKO_ARATH RecName: Full=Calcium-dependent protein kinase 24 gi|4582467|gb|AAD24851.1| putative calcium-dependent protein kinase [Arabidopsis thaliana] gi|20198159|gb|AAM15433.1| putative calcium-dependent protein kinase [Arabidopsis thaliana] gi|91806299|gb|ABE65877.1| calcium-dependent protein kinase/CDPK [Arabidopsis thaliana] gi|330253461|gb|AEC08555.1| calcium-dependent protein kinase 24 [Arabidopsis thaliana]

 Score =  788 bits (2035), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/596 (65%), Positives = 472/596 (79%), Gaps = 36/596 (6%)

Query: 1   MGSCISLARKGAFFSKKSQAIGNIDNTASTNNKRNDASSKKPSPSPKHESVSKHASNVDK 60
           MGSC+S   KG+ F K+               +R  +S+ + S  P+ +S    ++N+ +
Sbjct: 1   MGSCVSSPLKGSPFGKRPV-------------RRRHSSNSRTSSVPRFDS----STNLSR 43

Query: 61  KSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK 120
           + I      V+  P    I  KY  GKELGRGEFG+TH+C EI T E +ACK+I+KEKL+
Sbjct: 44  RLIFQPPSRVLPEPIGDGIHLKYDLGKELGRGEFGVTHECIEISTRERFACKRISKEKLR 103

Query: 121 TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYT 180
           TEID++DVRREVEIMR LPKHPNIV++KEA+EDKDA+YLVME+CEGGELFDRIV++GHYT
Sbjct: 104 TEIDVEDVRREVEIMRCLPKHPNIVSFKEAFEDKDAVYLVMEICEGGELFDRIVSRGHYT 163

Query: 181 ERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ 240
           ERAAA+V KTIL +VKVCHE+GV+HRDLKPENFLF++G+E +QLKAIDFGLSIFFKP ++
Sbjct: 164 ERAAASVAKTILEVVKVCHEHGVIHRDLKPENFLFSNGTETAQLKAIDFGLSIFFKPAQR 223

Query: 241 FCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI 300
           F EIVGSPYYMAPEVLRRNYGPEIDVWSAGVI+YILLCGVPPFWAETEEGIAHAI+RG I
Sbjct: 224 FNEIVGSPYYMAPEVLRRNYGPEIDVWSAGVILYILLCGVPPFWAETEEGIAHAIVRGNI 283

Query: 301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           DFERDPWPKVS EAKELVKNMLD NPY+RLT++EVLE+PWI+N   APNV+LG NV ++I
Sbjct: 284 DFERDPWPKVSHEAKELVKNMLDANPYSRLTVQEVLEHPWIRNAERAPNVNLGDNVRTKI 343

Query: 361 KQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV 420
           +QF +MN+FKKKVLR+VADNLP +++A I QMF  MDTDKNG LTFEEL+DGL  IGQ V
Sbjct: 344 QQFLLMNRFKKKVLRIVADNLPNEEIAAIVQMFQTMDTDKNGHLTFEELRDGLKKIGQVV 403

Query: 421 SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDE 480
            D DVKMLM+AAD DGNG+LSCDEFVT+S+HLKR+G D+ L +AF++FDKN +GFIE+DE
Sbjct: 404 PDGDVKMLMDAADTDGNGMLSCDEFVTLSIHLKRMGCDEHLQEAFKYFDKNGNGFIELDE 463

Query: 481 LKEVLLEDNAG-PNG-DQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRA 538
           LK  L +D  G  NG DQ I+DI  DVDL++DGRISF+EFKAMM SG DWKMASRQYSRA
Sbjct: 464 LKVALCDDKLGHANGNDQWIKDIFFDVDLNKDGRISFDEFKAMMKSGTDWKMASRQYSRA 523

Query: 539 MMSALSIKLFKD---------KSMELT---KSMEL-----NKSMELKKSVELKKSG 577
           +++ALSIK+FK+          SME     K  +L     NKSMEL+ S   K SG
Sbjct: 524 LLNALSIKMFKEDFGDNGPKSHSMEFPIARKRAKLLDAPKNKSMELQISKTYKPSG 579

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116831129|gb|ABK28519.1| unknown [Arabidopsis thaliana]

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/596 (65%), Positives = 472/596 (79%), Gaps = 36/596 (6%)

Query: 1   MGSCISLARKGAFFSKKSQAIGNIDNTASTNNKRNDASSKKPSPSPKHESVSKHASNVDK 60
           MGSC+S   KG+ F K+               +R  +S+ + S  P+ +S    ++N+ +
Sbjct: 1   MGSCVSSPLKGSPFGKRPV-------------RRRHSSNSRTSSVPRFDS----STNLSR 43

Query: 61  KSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK 120
           + I      V+  P    I  KY  GKELGRGEFG+TH+C EI T E +ACK+I+KEKL+
Sbjct: 44  RLIFQPPSRVLPEPIGDGIHLKYDLGKELGRGEFGVTHECIEISTRERFACKRISKEKLR 103

Query: 121 TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYT 180
           TEID++DVRREVEIMR LPKHPNIV++KEA+EDKDA+YLVME+CEGGELFDRIV++GHYT
Sbjct: 104 TEIDVEDVRREVEIMRCLPKHPNIVSFKEAFEDKDAVYLVMEICEGGELFDRIVSRGHYT 163

Query: 181 ERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ 240
           ERAAA+V KTIL +VKVCHE+GV+HRDLKPENFLF++G+E +QLKAIDFGLSIFFKP ++
Sbjct: 164 ERAAASVAKTILEVVKVCHEHGVIHRDLKPENFLFSNGTETAQLKAIDFGLSIFFKPAQR 223

Query: 241 FCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI 300
           F EIVGSPYYMAPEVLRRNYGPEIDVWSAGVI+YILLCGVPPFWAETEEGIAHAI+RG I
Sbjct: 224 FNEIVGSPYYMAPEVLRRNYGPEIDVWSAGVILYILLCGVPPFWAETEEGIAHAIVRGNI 283

Query: 301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           DFERDPWPKVS EAKELVKNMLD NPY+RLT++EVLE+PWI+N   APNV+LG NV ++I
Sbjct: 284 DFERDPWPKVSHEAKELVKNMLDANPYSRLTVQEVLEHPWIRNAERAPNVNLGDNVRTKI 343

Query: 361 KQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV 420
           +QF +MN+FKKKVLR+VADNLP +++A I QMF  MDTDKNG LTFEEL+DGL  IGQ V
Sbjct: 344 QQFLLMNRFKKKVLRIVADNLPNEEIAAIVQMFQTMDTDKNGHLTFEELRDGLKKIGQVV 403

Query: 421 SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDE 480
            D DVKMLM+AAD DGNG+LSCDEFVT+S+HLKR+G D+ L +AF++FDKN +GFIE+DE
Sbjct: 404 PDGDVKMLMDAADTDGNGMLSCDEFVTLSIHLKRMGCDEHLQEAFKYFDKNGNGFIELDE 463

Query: 481 LKEVLLEDNAG-PNG-DQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRA 538
           LK  L +D  G  NG DQ I+DI  DVDL++DGRISF+EFKAMM SG DWKMASRQYSRA
Sbjct: 464 LKVALCDDKLGHANGNDQWIKDIFFDVDLNKDGRISFDEFKAMMKSGTDWKMASRQYSRA 523

Query: 539 MMSALSIKLFKD---------KSMELT---KSMEL-----NKSMELKKSVELKKSG 577
           +++ALSIK+FK+          SME     K  +L     NKSMEL+ S   K SG
Sbjct: 524 LLNALSIKMFKEDFGDNGPKSHSMEFPIARKRAKLLDAPKNKSMELQISKTYKPSG 579

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|26450847|dbj|BAC42531.1| putative calcium-dependent protein kinase [Arabidopsis thaliana]

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/596 (65%), Positives = 471/596 (79%), Gaps = 36/596 (6%)

Query: 1   MGSCISLARKGAFFSKKSQAIGNIDNTASTNNKRNDASSKKPSPSPKHESVSKHASNVDK 60
           MGSC+S   KG+ F K+               +R  +S+ + S  P+ +S    ++N+ +
Sbjct: 1   MGSCVSSPLKGSPFGKRPV-------------RRRHSSNSRTSSVPRFDS----STNLSR 43

Query: 61  KSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK 120
           + I      V+  P    I  KY  GKELGRGEFG+TH+C EI T E +ACK+I+KEKL+
Sbjct: 44  RLIFQPPSRVLPEPIGDGIHLKYDLGKELGRGEFGVTHECIEISTRERFACKRISKEKLR 103

Query: 121 TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYT 180
           TEID++DVRREVEIMR LPKHPNIV++KEA+EDKDA+YLVME+CEGGELFDRIV++GHYT
Sbjct: 104 TEIDVEDVRREVEIMRCLPKHPNIVSFKEAFEDKDAVYLVMEICEGGELFDRIVSRGHYT 163

Query: 181 ERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ 240
           ERAAA+V KTIL +VKVCHE+GV+HRDLKPENFLF++G+E +QLKAIDFGLSIFFKP ++
Sbjct: 164 ERAAASVAKTILEVVKVCHEHGVIHRDLKPENFLFSNGTETAQLKAIDFGLSIFFKPAQR 223

Query: 241 FCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI 300
           F EIVGSPYYMAPEVLRRNYGPEIDVWSAGVI+YILLCGVPPFWAETEEGIAHAI+RG I
Sbjct: 224 FNEIVGSPYYMAPEVLRRNYGPEIDVWSAGVILYILLCGVPPFWAETEEGIAHAIVRGNI 283

Query: 301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           DFERDPWPKVS EAKELVKNMLD NPY+RLT++EVLE+PWI+N   APNV+LG NV ++I
Sbjct: 284 DFERDPWPKVSHEAKELVKNMLDANPYSRLTVQEVLEHPWIRNAERAPNVNLGDNVRTKI 343

Query: 361 KQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV 420
           +QF +MN+FKKKVLR+VADNLP +++A I QMF  MD DKNG LTFEEL+DGL  IGQ V
Sbjct: 344 QQFLLMNRFKKKVLRIVADNLPNEEIAAIVQMFQTMDADKNGHLTFEELRDGLKKIGQVV 403

Query: 421 SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDE 480
            D DVKMLM+AAD DGNG+LSCDEFVT+S+HLKR+G D+ L +AF++FDKN +GFIE+DE
Sbjct: 404 PDGDVKMLMDAADTDGNGMLSCDEFVTLSIHLKRMGCDEHLQEAFKYFDKNGNGFIELDE 463

Query: 481 LKEVLLEDNAG-PNG-DQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRA 538
           LK  L +D  G  NG DQ I+DI  DVDL++DGRISF+EFKAMM SG DWKMASRQYSRA
Sbjct: 464 LKVALCDDKLGHANGNDQWIKDIFFDVDLNKDGRISFDEFKAMMKSGTDWKMASRQYSRA 523

Query: 539 MMSALSIKLFKD---------KSMELT---KSMEL-----NKSMELKKSVELKKSG 577
           +++ALSIK+FK+          SME     K  +L     NKSMEL+ S   K SG
Sbjct: 524 LLNALSIKMFKEDFGDNGPKSHSMEFPIARKRAKLLDAPKNKSMELQISKTYKPSG 579

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|73487204|gb|AAZ76711.1| calcium-dependent protein kinase 2 [Petunia integrifolia subsp. inflata]

 Score =  777 bits (2006), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/555 (65%), Positives = 451/555 (81%), Gaps = 21/555 (3%)

Query: 1   MGSCISLARKGAFFSKKSQAIGNIDNTASTNNKRNDASSKKPSPSPKHESVSKHASNVDK 60
           MG+C+S+         +++ +     T S N  R           PK +  S+  +    
Sbjct: 1   MGTCMSVQNASFLKRTRNRPVPIDQETCSKNTSRTSV--------PKSQKFSRPLN---- 48

Query: 61  KSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK 120
                    VV +P+  +I  +Y FGKELGRGEFGIT+ C +  +GE  ACK IAK KL+
Sbjct: 49  ---------VVKDPSGDDINKRYEFGKELGRGEFGITYHCVDKVSGENVACKTIAKSKLR 99

Query: 121 TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYT 180
           TEID++DVRREV IMRHLPKHPNIV+YKE YEDK+A+YLVMELCEGGELFDRIV +GHYT
Sbjct: 100 TEIDVEDVRREVVIMRHLPKHPNIVSYKEVYEDKEAVYLVMELCEGGELFDRIVARGHYT 159

Query: 181 ERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ 240
           ERAAA V KTIL +VKVCHE+GV+HRDLKPENFL+A+ +EN+QLKAIDFGLSIFF+PG++
Sbjct: 160 ERAAARVTKTILEVVKVCHEHGVIHRDLKPENFLYANATENAQLKAIDFGLSIFFEPGQR 219

Query: 241 FCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI 300
           F EIVGSPYYMAPEVLRRNYGPE+DVWSAGVI+YILLCGVPPFWAETEEGIAHAI++G I
Sbjct: 220 FSEIVGSPYYMAPEVLRRNYGPEVDVWSAGVILYILLCGVPPFWAETEEGIAHAIVKGTI 279

Query: 301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           DF RDPWP+VS+EAK+LVK MLDPNPYNRLT+EEVL++ WI+N     N+ LG  V ++I
Sbjct: 280 DFNRDPWPRVSEEAKDLVKGMLDPNPYNRLTVEEVLDHYWIQNAEKVSNICLGEGVRAKI 339

Query: 361 KQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV 420
           KQF++MNKFKKKVLRVVADNLPQDQ+  IKQMFYMMDTDKNG+L+F+ELKDGL+++GQ V
Sbjct: 340 KQFTLMNKFKKKVLRVVADNLPQDQVHGIKQMFYMMDTDKNGNLSFQELKDGLHLMGQAV 399

Query: 421 SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDE 480
           +DP+V++LM+AADVDGNG+L+C+EFVTM+VHLKR+ NDD L +AF  FDKN+SG+IE ++
Sbjct: 400 ADPEVQLLMDAADVDGNGMLNCEEFVTMAVHLKRLSNDDHLRKAFLHFDKNKSGYIEFED 459

Query: 481 LKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMM 540
           LK+ L +D+ GP  DQ I DI+ D DLD+DGRIS+++FK MM++G DWKM SRQYS+AM+
Sbjct: 460 LKDSLFDDHLGPKNDQVIHDIIFDADLDKDGRISYQDFKVMMSTGTDWKMGSRQYSKAML 519

Query: 541 SALSIKLFKDKSMEL 555
           +ALS++LFKDKS+++
Sbjct: 520 NALSMRLFKDKSIQV 534

Source: Petunia integrifolia subsp. inflata

Species: Petunia integrifolia

Genus: Petunia

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	586
TAIR|locus:2061290	582	CPK24 "AT2G31500" [Arabidopsis	0.895	0.902	0.662	4e-194
TAIR|locus:505006616	535	CPK7 "calmodulin-domain protei	0.858	0.940	0.589	5e-163
TAIR|locus:2150230	533	CDPK19 "calcium-dependent prot	0.834	0.917	0.595	2.8e-160
TAIR|locus:2103498	538	CPK32 "calcium-dependent prote	0.825	0.899	0.563	1.8e-156
TAIR|locus:2011201	545	CDPK1 "calcium-dependent prote	0.832	0.895	0.580	9.2e-155
TAIR|locus:2054386	530	CPK14 "calcium-dependent prote	0.825	0.913	0.577	1.9e-154
TAIR|locus:2074338	528	CPK13 "calcium-dependent prote	0.858	0.952	0.559	2e-150
TAIR|locus:2027227	541	CPK30 "calcium-dependent prote	0.827	0.896	0.559	8.8e-150
TAIR|locus:2177023	528	CPK17 "calcium-dependent prote	0.873	0.969	0.486	3.2e-129
TAIR|locus:2150225	523	CPK34 "AT5G19360" [Arabidopsis	0.773	0.866	0.526	4.6e-128

TAIR|locus:2061290 CPK24 "AT2G31500" [Arabidopsis thaliana (taxid:3702)]

 Score = 1827 (648.2 bits), Expect = 4.0e-194, Sum P(3) = 4.0e-194
 Identities = 354/534 (66%), Positives = 426/534 (79%)

Query:    55 ASNVDKKSISFQLRS-VVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKK 113
             ++N+ ++ I FQ  S V+  P    I  KY  GKELGRGEFG+TH+C EI T E +ACK+
Sbjct:    38 STNLSRRLI-FQPPSRVLPEPIGDGIHLKYDLGKELGRGEFGVTHECIEISTRERFACKR 96

Query:   114 IAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI 173
             I+KEKL+TEID++DVRREVEIMR LPKHPNIV++KEA+EDKDA+YLVME+CEGGELFDRI
Sbjct:    97 ISKEKLRTEIDVEDVRREVEIMRCLPKHPNIVSFKEAFEDKDAVYLVMEICEGGELFDRI 156

Query:   174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI 233
             V++GHYTERAAA+V KTIL +VKVCHE+GV+HRDLKPENFLF++G+E +QLKAIDFGLSI
Sbjct:   157 VSRGHYTERAAASVAKTILEVVKVCHEHGVIHRDLKPENFLFSNGTETAQLKAIDFGLSI 216

Query:   234 FFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAH 293
             FFKP ++F EIVGSPYYMAPEVLRRNYGPEIDVWSAGVI+YILLCGVPPFWAETEEGIAH
Sbjct:   217 FFKPAQRFNEIVGSPYYMAPEVLRRNYGPEIDVWSAGVILYILLCGVPPFWAETEEGIAH 276

Query:   294 AIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLG 353
             AI+RG IDFERDPWPKVS EAKELVKNMLD NPY+RLT++EVLE+PWI+N   APNV+LG
Sbjct:   277 AIVRGNIDFERDPWPKVSHEAKELVKNMLDANPYSRLTVQEVLEHPWIRNAERAPNVNLG 336

Query:   354 GNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGL 413
              NV ++I+QF +MN+FKKKVLR+VADNLP +++A I QMF  MDTDKNG LTFEEL+DGL
Sbjct:   337 DNVRTKIQQFLLMNRFKKKVLRIVADNLPNEEIAAIVQMFQTMDTDKNGHLTFEELRDGL 396

Query:   414 NMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQS 473
               IGQ V D DVKMLM+AAD DGNG+LSCDEFVT+S+HLKR+G D+ L +AF++FDKN +
Sbjct:   397 KKIGQVVPDGDVKMLMDAADTDGNGMLSCDEFVTLSIHLKRMGCDEHLQEAFKYFDKNGN 456

Query:   474 GFIXXXXXXXXXXXXNAG-PNG-DQTXXXXXXXXXXXXXXXXSFEEFKAMMTSGADWKMA 531
             GFI              G  NG DQ                 SF+EFKAMM SG DWKMA
Sbjct:   457 GFIELDELKVALCDDKLGHANGNDQWIKDIFFDVDLNKDGRISFDEFKAMMKSGTDWKMA 516

Query:   532 SRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIPHNQ 585
             SRQYSRA+++ALSIK+FK+   +   +   + SME    +  K++  L  P N+
Sbjct:   517 SRQYSRALLNALSIKMFKE---DFGDNGPKSHSMEFP--IARKRAKLLDAPKNK 565

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0004672 "protein kinase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0080092 "regulation of pollen tube growth" evidence=IMP

GO:1901979 "regulation of inward rectifier potassium channel activity" evidence=IDA

TAIR|locus:505006616 CPK7 "calmodulin-domain protein kinase 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 1587 (563.7 bits), Expect = 5.0e-163, P = 5.0e-163
 Identities = 297/504 (58%), Positives = 381/504 (75%)

Query:    52 SKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYAC 111
             S   +  D+    F+L SV+ +P   +I  +Y  G+E+GRGEFGIT+ C + ETGE YAC
Sbjct:    29 SNEYATTDRSGAGFKL-SVLKDPTGHDISLQYDLGREVGRGEFGITYLCTDKETGEKYAC 87

Query:   112 KKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFD 171
             K I+K+KL+T +DI+DVRREVEIM+H+PKHPN+V+ K+++ED DA+++VMELCEGGELFD
Sbjct:    88 KSISKKKLRTAVDIEDVRREVEIMKHMPKHPNVVSLKDSFEDDDAVHIVMELCEGGELFD 147

Query:   172 RIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL 231
             RIV +GHYTERAAAAV KTI+ +V++CH+ GVMHRDLKPENFLFA+  E S LKAIDFGL
Sbjct:   148 RIVARGHYTERAAAAVMKTIVEVVQICHKQGVMHRDLKPENFLFANKKETSALKAIDFGL 207

Query:   232 SIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGI 291
             S+FFKPGEQF EIVGSPYYMAPEVLRRNYGPEIDVWSAGVI+YILLCGVPPFWAETE+G+
Sbjct:   208 SVFFKPGEQFNEIVGSPYYMAPEVLRRNYGPEIDVWSAGVILYILLCGVPPFWAETEQGV 267

Query:   292 AHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVS 351
             A AIIR  IDF+RDPWP+VS  AK+LV+ ML+P+P  RLT  +VLE+ WI N   APNVS
Sbjct:   268 AQAIIRSVIDFKRDPWPRVSDSAKDLVRKMLEPDPKKRLTAAQVLEHTWILNAKKAPNVS 327

Query:   352 LGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKD 411
             LG  V +R+KQFS+MNK KK+ LRV+A++L  ++ A IK+ F MMD +K G +  EELK 
Sbjct:   328 LGETVKARLKQFSVMNKLKKRALRVIAEHLSVEEAAGIKEAFEMMDVNKRGKINLEELKY 387

Query:   412 GLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKN 471
             GL   GQ+++D D+++LMEA DVDG+G L+  EFV +SVHLK++ ND+ L +AF FFD+N
Sbjct:   388 GLQKAGQQIADTDLQILMEATDVDGDGTLNYSEFVAVSVHLKKMANDEHLHKAFNFFDQN 447

Query:   472 QSGFIXXXXXXXXXXXXNAGPNGDQTXXXXXXXXXXXXXXXXSFEEFKAMMTSGADWKMA 531
             QSG+I                + ++                 S+EEF AMM +G DW+ A
Sbjct:   448 QSGYIEIDELREALNDELDNTSSEEVIAAIMQDVDTDKDGRISYEEFVAMMKAGTDWRKA 507

Query:   532 SRQYSRAMMSALSIKLFKDKSMEL 555
             SRQYSR   ++LS+KL +D S++L
Sbjct:   508 SRQYSRERFNSLSLKLMRDGSLQL 531

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2150230 CDPK19 "calcium-dependent protein kinase 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 1561 (554.6 bits), Expect = 2.8e-160, P = 2.8e-160
 Identities = 293/492 (59%), Positives = 381/492 (77%)

Query:    65 FQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID 124
             F+L SV+ +P   +I   Y  G+E+GRGEFGIT+ C +I+TGE YACK I+K+KL+T +D
Sbjct:    40 FKL-SVLKDPTGHDISLMYDLGREVGRGEFGITYLCTDIKTGEKYACKSISKKKLRTAVD 98

Query:   125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
             I+DVRREVEIM+H+P+HPNIV+ K+A+ED DA+++VMELCEGGELFDRIV +GHYTERAA
Sbjct:    99 IEDVRREVEIMKHMPRHPNIVSLKDAFEDDDAVHIVMELCEGGELFDRIVARGHYTERAA 158

Query:   185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI 244
             AAV KTIL +V++CH++GVMHRDLKPENFLFA+  E S LKAIDFGLS+FFKPGE F EI
Sbjct:   159 AAVMKTILEVVQICHKHGVMHRDLKPENFLFANKKETSALKAIDFGLSVFFKPGEGFNEI 218

Query:   245 VGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER 304
             VGSPYYMAPEVLRRNYGPE+D+WSAGVI+YILLCGVPPFWAETE+G+A AIIR  IDF+R
Sbjct:   219 VGSPYYMAPEVLRRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKR 278

Query:   305 DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFS 364
             DPWP+VS+ AK+LV+ ML+P+P  RL+  +VLE+ WI+N   APNVSLG  V +R+KQFS
Sbjct:   279 DPWPRVSETAKDLVRKMLEPDPKKRLSAAQVLEHSWIQNAKKAPNVSLGETVKARLKQFS 338

Query:   365 IMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQK-VSDP 423
             +MNK KK+ LRV+A++L  +++A IK+ F MMD+ K G +  EELK GL+ +GQ+ + D 
Sbjct:   339 VMNKLKKRALRVIAEHLSVEEVAGIKEAFEMMDSKKTGKINLEELKFGLHKLGQQQIPDT 398

Query:   424 DVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIXXXXXXX 483
             D+++LMEAADVDG+G L+  EFV +SVHLK++ ND+ L +AF FFD+NQS +I       
Sbjct:   399 DLQILMEAADVDGDGTLNYGEFVAVSVHLKKMANDEHLHKAFSFFDQNQSDYIEIEELRE 458

Query:   484 XXXXXNAGPNGDQTXXXXXXXXXXXXXXXXSFEEFKAMMTSGADWKMASRQYSRAMMSAL 543
                      N ++                 S+EEF AMM +G DW+ ASRQYSR   ++L
Sbjct:   459 ALND-EVDTNSEEVVAAIMQDVDTDKDGRISYEEFAAMMKAGTDWRKASRQYSRERFNSL 517

Query:   544 SIKLFKDKSMEL 555
             S+KL ++ S++L
Sbjct:   518 SLKLMREGSLQL 529

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2103498 CPK32 "calcium-dependent protein kinase 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 1525 (541.9 bits), Expect = 1.8e-156, P = 1.8e-156
 Identities = 274/486 (56%), Positives = 370/486 (76%)

Query:    70 VVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR 129
             V+++P    I  KYT G+ELGRGEFG+T+ C + ET + +ACK I K+KL+T +DI+DVR
Sbjct:    50 VLNDPTGREIESKYTLGRELGRGEFGVTYLCTDKETDDVFACKSILKKKLRTAVDIEDVR 109

Query:   130 REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGK 189
             REVEIMRH+P+HPN+VT KE YED+ A++LVMELCEGGELFDRIV +GHYTERAAAAV K
Sbjct:   110 REVEIMRHMPEHPNVVTLKETYEDEHAVHLVMELCEGGELFDRIVARGHYTERAAAAVTK 169

Query:   190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
             TI+ +V+VCH++GVMHRDLKPENFLF +  E + LKAIDFGLS+FFKPGE+F EIVGSPY
Sbjct:   170 TIMEVVQVCHKHGVMHRDLKPENFLFGNKKETAPLKAIDFGLSVFFKPGERFNEIVGSPY 229

Query:   250 YMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
             YMAPEVL+RNYGPE+D+WSAGVI+YILLCGVPPFWAETE+G+A AIIR  +DF RDPWPK
Sbjct:   230 YMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVLDFRRDPWPK 289

Query:   310 VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKF 369
             VS+ AK+L++ MLDP+   RLT ++VL++PW++N   APNVSLG  V +R+KQF++MNK 
Sbjct:   290 VSENAKDLIRKMLDPDQKRRLTAQQVLDHPWLQNAKTAPNVSLGETVRARLKQFTVMNKL 349

Query:   370 KKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLM 429
             KK+ LRV+A++L  ++ + I++ F +MDT + G +  +ELK GL  +G  +   D+++LM
Sbjct:   350 KKRALRVIAEHLSDEEASGIREGFQIMDTSQRGKINIDELKIGLQKLGHAIPQDDLQILM 409

Query:   430 EAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIXXXXXXXXXXXXN 489
             +A D+D +G L CDEF+ +SVHL+++GND+ L +AF FFD+N +G+I             
Sbjct:   410 DAGDIDRDGYLDCDEFIAISVHLRKMGNDEHLKKAFAFFDQNNNGYIEIEELREALSD-E 468

Query:   490 AGPNGDQTXXXXXXXXXXXXXXXXSFEEFKAMMTSGADWKMASRQYSRAMMSALSIKLFK 549
              G + ++                 S+EEF  MM +G DW+ ASRQYSR   +++S+KL +
Sbjct:   469 LGTS-EEVVDAIIRDVDTDKDGRISYEEFVTMMKTGTDWRKASRQYSRERFNSISLKLMQ 527

Query:   550 DKSMEL 555
             D S+++
Sbjct:   528 DASLQV 533

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004698 "calcium-dependent protein kinase C activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2011201 CDPK1 "calcium-dependent protein kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1509 (536.3 bits), Expect = 9.2e-155, P = 9.2e-155
 Identities = 284/489 (58%), Positives = 358/489 (73%)

Query:    67 LRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDID 126
             L+ V+    +  I DKY  G+ELGRGEFGIT+ C + ET E  ACK I+K KL+T +DI+
Sbjct:    47 LKDVIPMSNQTQISDKYILGRELGRGEFGITYLCTDRETHEALACKSISKRKLRTAVDIE 106

Query:   127 DVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
             DVRREV IM  LP+HPN+V  K +YED + ++LVMELCEGGELFDRIV +GHYTERAAAA
Sbjct:   107 DVRREVAIMSTLPEHPNVVKLKASYEDNENVHLVMELCEGGELFDRIVARGHYTERAAAA 166

Query:   187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVG 246
             V +TI  +V +CH NGVMHRDLKPENFLFA+  ENS LKAIDFGLS+FFKPG++F EIVG
Sbjct:   167 VARTIAEVVMMCHSNGVMHRDLKPENFLFANKKENSPLKAIDFGLSVFFKPGDKFTEIVG 226

Query:   247 SPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP 306
             SPYYMAPEVL+R+YGP +DVWSAGVIIYILLCGVPPFWAETE+G+A AI+RG +DF+RDP
Sbjct:   227 SPYYMAPEVLKRDYGPGVDVWSAGVIIYILLCGVPPFWAETEQGVALAILRGVLDFKRDP 286

Query:   307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIM 366
             WP++S+ AK LVK MLDP+P  RLT ++VL +PWI+N   APNV LG  V SR+KQFS+M
Sbjct:   287 WPQISESAKSLVKQMLDPDPTKRLTAQQVLAHPWIQNAKKAPNVPLGDIVRSRLKQFSMM 346

Query:   367 NKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVK 426
             N+FKKKVLRV+A++L   ++  IK MF +MD DK+G +T+ ELK GL  +G ++ +P++K
Sbjct:   347 NRFKKKVLRVIAEHLSIQEVEVIKNMFSLMDDDKDGKITYPELKAGLQKVGSQLGEPEIK 406

Query:   427 MLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIXXXXXXXXXX 486
             MLME ADVDGNG L   EFV + +HL++I ND++   AF FFDK+ S +I          
Sbjct:   407 MLMEVADVDGNGFLDYGEFVAVIIHLQKIENDELFKLAFMFFDKDGSTYIELDELREALA 466

Query:   487 XXNAGPNGDQTXXXXXXXXXXXXXXXXSFEEFKAMMTSGADWKMASRQYSRAMMSALSIK 546
                  P+                    +++EF  MM +G DW+ ASRQYSR    +LSI 
Sbjct:   467 DELGEPDAS-VLSDIMREVDTDKDGRINYDEFVTMMKAGTDWRKASRQYSRERFKSLSIN 525

Query:   547 LFKDKSMEL 555
             L KD S+ L
Sbjct:   526 LMKDGSLHL 534

GO:0004672 "protein kinase activity" evidence=IEA;TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006499 "N-terminal protein myristoylation" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2054386 CPK14 "calcium-dependent protein kinase 14" [Arabidopsis thaliana (taxid:3702)]

 Score = 1506 (535.2 bits), Expect = 1.9e-154, P = 1.9e-154
 Identities = 280/485 (57%), Positives = 361/485 (74%)

Query:    70 VVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR 129
             V+  P    I  KY  G+ELGRGEFG+T+ C EIETGE +ACK I K+KLKT IDI+DV+
Sbjct:    41 VLKEPTGHEIKQKYKLGRELGRGEFGVTYLCTEIETGEIFACKSILKKKLKTSIDIEDVK 100

Query:   130 REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGK 189
             REVEIMR +P+HPNIVT KE YED  A++LVMELCEGGELFDRIV +GHYTERAAA+V K
Sbjct:   101 REVEIMRQMPEHPNIVTLKETYEDDKAVHLVMELCEGGELFDRIVARGHYTERAAASVIK 160

Query:   190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
             TI+ +V++CH++GVMHRDLKPENFLFA+  E + LKAIDFGLS+FFKPGE+F EIVGSPY
Sbjct:   161 TIIEVVQMCHKHGVMHRDLKPENFLFANKKETASLKAIDFGLSVFFKPGERFNEIVGSPY 220

Query:   250 YMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
             YMAPEVLRR+YG EID+WSAGVI+YILLCGVPPFWAETE G+A AI++  IDF+RDPWPK
Sbjct:   221 YMAPEVLRRSYGQEIDIWSAGVILYILLCGVPPFWAETEHGVAKAILKSVIDFKRDPWPK 280

Query:   310 VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKF 369
             VS  AK+L+K ML P+P  RLT ++VL++PWI+N  +A NVSLG  V +R+KQFS+MNK 
Sbjct:   281 VSDNAKDLIKKMLHPDPRRRLTAQQVLDHPWIQNGKNASNVSLGETVRARLKQFSVMNKL 340

Query:   370 KKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLM 429
             KK+ LRV+A++L  ++ + IK+ F +MDT   G +T  EL  GL  +G  V   D+++LM
Sbjct:   341 KKRALRVIAEHLSVEETSCIKERFQVMDTSNRGKITITELGIGLQKLGIVVPQDDIQILM 400

Query:   430 EAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIXXXXXXXXXXXXN 489
             +A DVD +G L  +EFV +SVH++++GND+ L +AF FFDKN+SG+I            +
Sbjct:   401 DAGDVDKDGYLDVNEFVAISVHIRKLGNDEHLKKAFTFFDKNKSGYIEIEELRDALAD-D 459

Query:   490 AGPNGDQTXXXXXXXXXXXXXXXXSFEEFKAMMTSGADWKMASRQYSRAMMSALSIKLFK 549
                  ++                 S++EF  MM +G DW+ ASRQYSR +   LS+KL +
Sbjct:   460 VDTTSEEVVEAIILDVDTNKDGKISYDEFATMMKTGTDWRKASRQYSRDLFKCLSLKLMQ 519

Query:   550 DKSME 554
             D S++
Sbjct:   520 DGSLQ 524

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

TAIR|locus:2074338 CPK13 "calcium-dependent protein kinase 13" [Arabidopsis thaliana (taxid:3702)]

 Score = 1468 (521.8 bits), Expect = 2.0e-150, P = 2.0e-150
 Identities = 284/508 (55%), Positives = 370/508 (72%)

Query:    48 HESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGE 107
             H+   K A+   KKS   ++ S V  P E NI D+Y   +ELGRGEFG+T+ C E  + +
Sbjct:    23 HDHARKDAAG-GKKSAPIRVLSDV--PKE-NIEDRYLLDRELGRGEFGVTYLCIERSSRD 78

Query:   108 TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGG 167
               ACK I+K KL+T +DI+DV+REV IM+HLPK  +IVT KEA ED +A++LVMELCEGG
Sbjct:    79 LLACKSISKRKLRTAVDIEDVKREVAIMKHLPKSSSIVTLKEACEDDNAVHLVMELCEGG 138

Query:   168 ELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI 227
             ELFDRIV +GHYTERAAA V KTI+ +V++CH++GV+HRDLKPENFLFA+  ENS LKAI
Sbjct:   139 ELFDRIVARGHYTERAAAGVTKTIVEVVQLCHKHGVIHRDLKPENFLFANKKENSPLKAI 198

Query:   228 DFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAET 287
             DFGLSIFFKPGE+F EIVGSPYYMAPEVL+RNYGPEID+WSAGVI+YILLCGVPPFWAE+
Sbjct:   199 DFGLSIFFKPGEKFSEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGVPPFWAES 258

Query:   288 EEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHA 347
             E+G+A AI+RG IDF+R+PWP +S+ AK LV+ ML+P+P  RLT ++VLE+PWI+N   A
Sbjct:   259 EQGVAQAILRGVIDFKREPWPNISETAKNLVRQMLEPDPKRRLTAKQVLEHPWIQNAKKA 318

Query:   348 PNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFE 407
             PNV LG  V SR+KQFS+MN+FK+K LRV+A+ L  +++  IK MF  MDTD +G ++ E
Sbjct:   319 PNVPLGDVVKSRLKQFSVMNRFKRKALRVIAEFLSTEEVEDIKVMFNKMDTDNDGIVSIE 378

Query:   408 ELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRF 467
             ELK GL     ++++ +V+ML+EA D  G G L   EFV +S+HL+++ ND+ L +AF +
Sbjct:   379 ELKAGLRDFSTQLAESEVQMLIEAVDTKGKGTLDYGEFVAVSLHLQKVANDEHLRKAFSY 438

Query:   468 FDKNQSGFIXXXXXXXXXXXXNAGPNGDQTXXXXXXXXXXXXXXXXSFEEFKAMMTSGAD 527
             FDK+ +G+I            + G +                    S+EEF AMM +G D
Sbjct:   439 FDKDGNGYILPQELCDALKE-DGGDDCVDVANDIFQEVDTDKDGRISYEEFAAMMKTGTD 497

Query:   528 WKMASRQYSRAMMSALSIKLFKDKSMEL 555
             W+ ASR YSR   ++LSIKL KD S+ L
Sbjct:   498 WRKASRHYSRGRFNSLSIKLMKDGSLNL 525

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2027227 CPK30 "calcium-dependent protein kinase 30" [Arabidopsis thaliana (taxid:3702)]

 Score = 1462 (519.7 bits), Expect = 8.8e-150, P = 8.8e-150
 Identities = 272/486 (55%), Positives = 353/486 (72%)

Query:    70 VVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR 129
             V+    +  I DKY  G+ELGRGEFGIT+ C + ET E  ACK I+K KL+T +D++DVR
Sbjct:    46 VIPMSHQSQISDKYILGRELGRGEFGITYLCTDRETREALACKSISKRKLRTAVDVEDVR 105

Query:   130 REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGK 189
             REV IM  LP+HPN+V  K  YED + ++LVMELCEGGELFDRIV +GHYTERAAA V +
Sbjct:   106 REVTIMSTLPEHPNVVKLKATYEDNENVHLVMELCEGGELFDRIVARGHYTERAAATVAR 165

Query:   190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
             TI  +V++CH NGVMHRDLKPENFLFA+  ENS LKAIDFGLS+ FKPGE+F EIVGSPY
Sbjct:   166 TIAEVVRMCHVNGVMHRDLKPENFLFANKKENSALKAIDFGLSVLFKPGERFTEIVGSPY 225

Query:   250 YMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
             YMAPEVL+RNYGPE+DVWSAGVI+YILLCGVPPFWAETE+G+A AI+RG +DF+RDPW +
Sbjct:   226 YMAPEVLKRNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVALAILRGVLDFKRDPWSQ 285

Query:   310 VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKF 369
             +S+ AK LVK ML+P+   RLT ++VL++PWI+N   APNV LG  V SR+KQFS+MN+ 
Sbjct:   286 ISESAKSLVKQMLEPDSTKRLTAQQVLDHPWIQNAKKAPNVPLGDIVRSRLKQFSMMNRL 345

Query:   370 KKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLM 429
             KKK LRV+A++L   ++  I+ MF +MD D +G +++ EL+ GL  +G ++ +P++K+LM
Sbjct:   346 KKKALRVIAEHLSIQEVEVIRNMFTLMDDDNDGKISYLELRAGLRKVGSQLGEPEIKLLM 405

Query:   430 EAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIXXXXXXXXXXXXN 489
             E ADV+GNG L   EFV + +HL+++ ND+   QAF FFDK+ SG+I             
Sbjct:   406 EVADVNGNGCLDYGEFVAVIIHLQKMENDEHFRQAFMFFDKDGSGYIESEELREALTDEL 465

Query:   490 AGPNGDQTXXXXXXXXXXXXXXXXSFEEFKAMMTSGADWKMASRQYSRAMMSALSIKLFK 549
               P+ +                  +++EF  MM +G DW+ ASRQYSR    +LS+ L K
Sbjct:   466 GEPD-NSVIIDIMREVDTDKDGKINYDEFVVMMKAGTDWRKASRQYSRERFKSLSLNLMK 524

Query:   550 DKSMEL 555
             D SM L
Sbjct:   525 DGSMHL 530

GO:0004672 "protein kinase activity" evidence=IEA;TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009612 "response to mechanical stimulus" evidence=RCA

GO:0019722 "calcium-mediated signaling" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=TAS

TAIR|locus:2177023 CPK17 "calcium-dependent protein kinase 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 1268 (451.4 bits), Expect = 3.2e-129, P = 3.2e-129
 Identities = 256/526 (48%), Positives = 337/526 (64%)

Query:     1 MGSCISLARKGAFFSKKSQAIGNIDNTASTNNKRNDAXXXXXXXXXXHESVSKHAS-NVD 59
             MG+C S  R  A       A+   +N AS +N  N                SKHA  +  
Sbjct:     1 MGNCCSHGRDSA---DNGDAL---ENGASASNAANSTGPTAEASVPQ----SKHAPPSPP 50

Query:    60 KKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL 119
               +    +  V+  P E ++   Y+ GKELGRG+FG+TH C +  TG  +ACK IAK KL
Sbjct:    51 PATKQGPIGPVLGRPME-DVKASYSLGKELGRGQFGVTHLCTQKATGHQFACKTIAKRKL 109

Query:   120 KTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY 179
               + DI+DVRREV+IM HL   PNIV  K AYEDK +++LVMELC GGELFDRI+ KGHY
Sbjct:   110 VNKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHY 169

Query:   180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
             +ERAAA++ +TI++IV  CH  GV+HRDLKPENFL  +  ENS LKA DFGLS+F+KPGE
Sbjct:   170 SERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENSPLKATDFGLSVFYKPGE 229

Query:   240 QFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK 299
              F +IVGS YY+APEVL+R YGPE D+WS GV++YILLCGVPPFWAE+E GI +AI+RG 
Sbjct:   230 VFKDIVGSAYYIAPEVLKRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILRGH 289

Query:   300 IDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSR 359
             +DF  DPWP +S +AK+LVK ML+ +P  RLT  +VL +PWIK D  AP+V L   V SR
Sbjct:   290 VDFSSDPWPSISPQAKDLVKKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSR 349

Query:   360 IKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQK 419
             +KQF  MN FKK  LRV+A  L ++++  +K+MF  MDTD +G +T EEL+ GL   G +
Sbjct:   350 LKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQGTR 409

Query:   420 VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIXXX 479
             +S+ +V+ LMEAAD DGNG +   EF+  ++H+ R+  ++ L  AF+ FDK+ SG+I   
Sbjct:   410 LSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITME 469

Query:   480 XXXXXXXXXNAGPNGDQTXXXXXXXXXXXXXXXXSFEEFKAMMTSG 525
                        G N  +                 +++EF AMM  G
Sbjct:   470 ELEQALREF--GMNDGRDIKEIISEVDGDNDGRINYDEFVAMMRKG 513

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0080092 "regulation of pollen tube growth" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2150225 CPK34 "AT5G19360" [Arabidopsis thaliana (taxid:3702)]

 Score = 1257 (447.5 bits), Expect = 4.6e-128, P = 4.6e-128
 Identities = 240/456 (52%), Positives = 313/456 (68%)

Query:    70 VVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR 129
             V+  P E ++   YT GKELGRG+FG+TH C +  TG  +ACK IAK KL  + DI+DVR
Sbjct:    56 VLGRPME-DVKSSYTLGKELGRGQFGVTHLCTQKATGLQFACKTIAKRKLVNKEDIEDVR 114

Query:   130 REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGK 189
             REV+IM HL   PNIV  K AYEDK +++LVMELC GGELFDRI+ KGHY+ERAAA++ +
Sbjct:   115 REVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYSERAAASLLR 174

Query:   190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
             TI++I+  CH  GV+HRDLKPENFL     ENS LKA DFGLS+F+KPGE F +IVGS Y
Sbjct:   175 TIVQIIHTCHSMGVIHRDLKPENFLLLSKDENSPLKATDFGLSVFYKPGEVFKDIVGSAY 234

Query:   250 YMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
             Y+APEVLRR YGPE D+WS GV++YILLCGVPPFWAE+E GI +AI+ G++DF  DPWP 
Sbjct:   235 YIAPEVLRRKYGPEADIWSIGVMLYILLCGVPPFWAESENGIFNAILSGQVDFSSDPWPV 294

Query:   310 VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKF 369
             +S +AK+LV+ ML+ +P  RLT  +VL +PWIK D  AP+V L   V SR+KQF  MN F
Sbjct:   295 ISPQAKDLVRKMLNSDPKQRLTAAQVLNHPWIKEDGEAPDVPLDNAVMSRLKQFKAMNNF 354

Query:   370 KKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLM 429
             KK  LRV+A  L ++++  +K+MF  MDTD +G +T EEL+ GL   G ++S+ +V+ LM
Sbjct:   355 KKVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEELRQGLAKQGTRLSEYEVQQLM 414

Query:   430 EAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIXXXXXXXXXXXXN 489
             EAAD DGNG +   EF+  ++H+ R+  ++ L  AF+ FDK+ SG+I             
Sbjct:   415 EAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITTEELEQALREF- 473

Query:   490 AGPNGDQTXXXXXXXXXXXXXXXXSFEEFKAMMTSG 525
              G N  +                 ++EEF AMM  G
Sbjct:   474 -GMNDGRDIKEIISEVDGDNDGRINYEEFVAMMRKG 508

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0080092 "regulation of pollen tube growth" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0004672 "protein kinase activity" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SIQ7	CDPKO_ARATH	2, ., 7, ., 1, 1, ., 1	0.6560	0.9556	0.9621	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.991
3rd Layer	2.7.11	0.976

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	CPK24	calcium dependent protein kinase 24 (490 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.01330027	hypothetical protein (876 aa)						•			0.800
	eugene3.00121046	hypothetical protein (907 aa)						•			0.800
	eugene3.00010578	hypothetical protein (927 aa)						•			0.800

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	586
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-100
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	7e-93
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-60
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	8e-60
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-57
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-54
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-53
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	5e-52
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	5e-50
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-49
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	2e-48
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	9e-48
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	4e-47
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	7e-46
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	9e-45
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	5e-44
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-43
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	2e-43
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-42
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	5e-42
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	4e-41
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-39
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	5e-39
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	3e-36
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	6e-36
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	8e-36
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-35
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-35
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	3e-35
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	3e-35
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	2e-34
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	9e-34
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	1e-33
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	3e-33
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	5e-33
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	5e-33
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	6e-33
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	6e-33
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	2e-32
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	3e-32
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	5e-32
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	8e-32
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	8e-32
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-31
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	1e-31
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	3e-31
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	3e-31
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	3e-31
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	7e-31
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-30
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-30
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	5e-30
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	1e-29
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-29
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	1e-29
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	2e-29
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-29
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	3e-29
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	7e-29
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	8e-29
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	1e-28
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-28
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	1e-28
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-28
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	2e-28
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	3e-28
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	3e-28
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	5e-28
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	5e-28
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	6e-28
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	7e-28
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	8e-28
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	2e-27
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	2e-27
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	3e-27
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	3e-27
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	3e-27
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	4e-27
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	4e-27
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	5e-27
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	6e-27
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	1e-26
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-26
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-26
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	3e-26
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	5e-26
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	6e-26
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	6e-26
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	6e-26
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	1e-25
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	1e-25
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	1e-25
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	1e-25
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	1e-25
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-25
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	1e-25
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	2e-25
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-25
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-25
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	2e-25
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	3e-25
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	5e-25
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	5e-25
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	6e-25
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	7e-25
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	8e-25
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	8e-25
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	2e-24
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	3e-24
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	3e-24
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	4e-24
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	5e-24
COG5126	160	COG5126, FRQ1, Ca2+-binding protein (EF-Hand super	6e-24
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	6e-24
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	7e-24
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	7e-24
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	1e-23
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	1e-23
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	1e-23
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	1e-23
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	1e-23
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	1e-23
PTZ00184	149	PTZ00184, PTZ00184, calmodulin; Provisional	2e-23
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-23
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	2e-23
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	4e-23
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	6e-23
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	6e-23
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	7e-23
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	8e-23
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	9e-23
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	1e-22
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-22
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	2e-22
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	2e-22
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	3e-22
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	4e-22
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	5e-22
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	7e-22
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	1e-21
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	2e-21
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	2e-21
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	2e-21
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-21
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	3e-21
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	3e-21
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	4e-21
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	5e-21
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	7e-21
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	8e-21
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	1e-20
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	1e-20
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	2e-20
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	2e-20
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	2e-20
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	3e-20
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	5e-20
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	6e-20
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	7e-20
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	1e-19
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-19
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	2e-19
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	2e-19
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-19
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	3e-19
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	5e-19
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	9e-19
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	1e-18
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-18
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	1e-18
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-18
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	4e-18
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	4e-18
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	1e-17
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	1e-17
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	2e-17
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	2e-17
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	2e-17
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	3e-17
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	4e-17
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	2e-16
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	3e-16
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	4e-16
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	5e-16
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	6e-16
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	1e-15
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	2e-15
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	2e-15
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	2e-15
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	4e-15
PTZ00183	158	PTZ00183, PTZ00183, centrin; Provisional	5e-15
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	8e-15
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	8e-15
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	1e-14
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-14
cd08216	314	cd08216, PK_STRAD, Pseudokinase domain of STE20-re	2e-14
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	2e-14
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	2e-14
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	3e-14
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	8e-14
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	8e-14
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	1e-13
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	2e-13
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	3e-13
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	4e-13
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	4e-13
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	7e-13
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	7e-13
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	9e-13
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	1e-12
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	1e-12
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	1e-12
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	2e-12
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	2e-12
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	3e-12
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	4e-12
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	9e-12
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	1e-11
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	1e-11
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-11
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	6e-11
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	6e-11
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	9e-11
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	1e-10
pfam13499	60	pfam13499, EF_hand_5, EF-hand domain pair	1e-10
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	1e-10
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	1e-10
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	2e-10
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	2e-10
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	2e-10
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-10
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-10
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	2e-10
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	3e-10
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	4e-10
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	7e-10
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	9e-10
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	2e-09
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	2e-09
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	2e-09
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	3e-09
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	4e-09
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	7e-09
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	1e-08
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	2e-08
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	2e-08
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-08
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	2e-08
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	3e-08
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	3e-08
pfam13833	53	pfam13833, EF_hand_6, EF-hand domain pair	3e-08
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	4e-08
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	4e-08
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	5e-08
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	5e-08
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	6e-08
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	8e-08
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	1e-07
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-07
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	2e-07
cd05120	155	cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot	3e-07
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	5e-07
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	9e-07
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	1e-06
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	1e-06
pfam13833	53	pfam13833, EF_hand_6, EF-hand domain pair	2e-06
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	2e-06
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-06
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	3e-06
PRK14879	211	PRK14879, PRK14879, serine/threonine protein kinas	6e-06
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	6e-06
pfam13499	60	pfam13499, EF_hand_5, EF-hand domain pair	9e-06
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	9e-06
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	1e-05
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-05
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	2e-05
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	3e-05
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	3e-05
smart00054	29	smart00054, EFh, EF-hand, calcium binding motif	3e-05
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	4e-05
pfam13202	25	pfam13202, EF_hand_3, EF hand	4e-05
PTZ00183	158	PTZ00183, PTZ00183, centrin; Provisional	5e-05
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	5e-05
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	5e-05
COG3642	204	COG3642, COG3642, Mn2+-dependent serine/threonine	6e-05
smart00750	176	smart00750, KIND, kinase non-catalytic C-lobe doma	6e-05
PRK09605	535	PRK09605, PRK09605, bifunctional UGMP family prote	7e-05
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	8e-05
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	9e-05
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	9e-05
pfam00036	29	pfam00036, efhand, EF hand	9e-05
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	1e-04
TIGR03724	199	TIGR03724, arch_bud32, Kae1-associated kinase Bud3	1e-04
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	1e-04
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	1e-04
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	3e-04
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	3e-04
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	3e-04
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	4e-04
PLN02964	644	PLN02964, PLN02964, phosphatidylserine decarboxyla	6e-04
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	8e-04
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	9e-04
pfam13405	30	pfam13405, EF_hand_4, EF-hand domain	0.001
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	0.002
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	0.002
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	0.002
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	0.002
smart00027	96	smart00027, EH, Eps15 homology domain	0.002
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	0.002
pfam00036	29	pfam00036, efhand, EF hand	0.003
pfam00036	29	pfam00036, efhand, EF hand	0.003
pfam13405	30	pfam13405, EF_hand_4, EF-hand domain	0.003
cd00213	88	cd00213, S-100, S-100: S-100 domain, which represe	0.003
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	0.004
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  304 bits (780), Expect = e-100
 Identities = 106/260 (40%), Positives = 152/260 (58%), Gaps = 7/260 (2%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y   ++LG G FG  +   + +TG+  A K I K+K+K   D + + RE++I++ L KHP
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKK--DRERILREIKILKKL-KHP 57

Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
           NIV   + +ED+D +YLVME CEGG+LFD +  +G  +E  A    + IL  ++  H  G
Sbjct: 58  NIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKG 117

Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRN-YG 261
           ++HRDLKPEN L     E+  +K  DFGL+    PGE+    VG+P YMAPEVL    YG
Sbjct: 118 IVHRDLKPENILL---DEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYG 174

Query: 262 PEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNM 321
             +D+WS GVI+Y LL G PPF  + +       I         P   +S EAK+L++ +
Sbjct: 175 KAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRKL 234

Query: 322 LDPNPYNRLTLEEVLENPWI 341
           L  +P  RLT EE L++P+ 
Sbjct: 235 LVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  285 bits (731), Expect = 7e-93
 Identities = 113/265 (42%), Positives = 154/265 (58%), Gaps = 11/265 (4%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y   ++LG G FG  ++     TG+  A K + K   K++ D    RRE+ I+R L  HP
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTA-RREIRILRRL-SHP 58

Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
           NIV   +A+EDKD +YLVME CEGG+LFD +   G  +E  A  +   ILR ++  H NG
Sbjct: 59  NIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNG 118

Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-KPGEQFCEIVGSPYYMAPEVLR--RN 259
           ++HRDLKPEN L     EN  +K  DFGL+    K        VG+P+YMAPEVL     
Sbjct: 119 IIHRDLKPENILL---DENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNG 175

Query: 260 YGPEIDVWSAGVIIYILLCGVPPFWAETEEG---IAHAIIRGKIDFERDPWPKVSKEAKE 316
           YGP++DVWS GVI+Y LL G PPF  E       +   I+   ++F+   W   S+EAK+
Sbjct: 176 YGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKD 235

Query: 317 LVKNMLDPNPYNRLTLEEVLENPWI 341
           L+K  L+ +P  R T EE+L++PW 
Sbjct: 236 LIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  201 bits (513), Expect = 2e-60
 Identities = 82/274 (29%), Positives = 143/274 (52%), Gaps = 30/274 (10%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           KY   K++G+G FG  +       G+ Y  K+I    + +E + +D   EV+I++ L  H
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKL-NH 58

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----VNKGHYTERAAAAVGKTILRI--- 194
           PNI+ Y E++E+K  + +VME  +GG+L  +I         + E       + IL     
Sbjct: 59  PNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPE-------EQILDWFVQ 111

Query: 195 ----VKVCHENGVMHRDLKPEN-FLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSP 248
               +K  H   ++HRD+KP+N FL ++G     +K  DFG+S          + +VG+P
Sbjct: 112 LCLALKYLHSRKILHRDIKPQNIFLTSNG----LVKLGDFGISKVLSSTVDLAKTVVGTP 167

Query: 249 YYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
           YY++PE+ +   Y  + D+WS G ++Y L     PF  E    +A  I++G+  +   P 
Sbjct: 168 YYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ--YPPIP- 224

Query: 308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
            + S E + LV ++L  +P  R ++ ++L++P+I
Sbjct: 225 SQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  198 bits (507), Expect = 8e-60
 Identities = 88/258 (34%), Positives = 138/258 (53%), Gaps = 15/258 (5%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           LG+G FG      + +TG+ YA K + K+K+    +++    E  I+  +  HP IV   
Sbjct: 1   LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI-NHPFIVKLH 59

Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDL 208
            A++ ++ +YLV+E   GGELF  +  +G ++E  A      I+  ++  H  G+++RDL
Sbjct: 60  YAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDL 119

Query: 209 KPENFLF-ADGSENSQLKAIDFGLSIFFKPGEQFC-EIVGSPYYMAPEVLRRN-YGPEID 265
           KPEN L  ADG     +K  DFGL+              G+P Y+APEVL    YG  +D
Sbjct: 120 KPENILLDADG----HIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVD 175

Query: 266 VWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPN 325
            WS GV++Y +L G PPF+AE  + I   I++  + F   P   +S EA++L+  +L  +
Sbjct: 176 WWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRF---P-EFLSPEARDLISGLLQKD 231

Query: 326 PYNRLT---LEEVLENPW 340
           P  RL     EE+  +P+
Sbjct: 232 PTKRLGSGGAEEIKAHPF 249

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  191 bits (487), Expect = 2e-57
 Identities = 89/255 (34%), Positives = 129/255 (50%), Gaps = 44/255 (17%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           LG G FG  +   + +TG+  A K I  +K  +   ++++ RE+EI++ L  HPNIV   
Sbjct: 1   LGEGGFGTVYLARDKKTGKKVAIKII--KKEDSSSLLEELLREIEILKKL-NHPNIVKLY 57

Query: 149 EAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRD 207
             +ED++ +YLVME CEGG L D +  N+G  +E     +   IL  ++  H NG++HRD
Sbjct: 58  GVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRD 117

Query: 208 LKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVLRRN--YGPEI 264
           LKPEN L    S+N ++K  DFGLS            IVG+P YMAPEVL     Y  + 
Sbjct: 118 LKPENILL--DSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKS 175

Query: 265 DVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDP 324
           D+WS GVI+Y L                                    E K+L++ ML  
Sbjct: 176 DIWSLGVILYEL-----------------------------------PELKDLIRKMLQK 200

Query: 325 NPYNRLTLEEVLENP 339
           +P  R + +E+LE+ 
Sbjct: 201 DPEKRPSAKEILEHL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  185 bits (473), Expect = 1e-54
 Identities = 92/268 (34%), Positives = 138/268 (51%), Gaps = 19/268 (7%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           + +G +G      +  TG+ YA K I K  +  +  +D V  E +I+    + P +V   
Sbjct: 1   ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQA-QSPYVVKLY 59

Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDL 208
            +++ K  +YLVME   GG+L   + N G   E  A      I+  ++  H NG++HRDL
Sbjct: 60  YSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDL 119

Query: 209 KPENFLFADGSENSQLKAIDFGLSIF---------FKPGEQFCEIVGSPYYMAPEV-LRR 258
           KP+N L      N  LK  DFGLS               ++   IVG+P Y+APEV L +
Sbjct: 120 KPDNILI---DSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQ 176

Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            +   +D WS G I+Y  L G+PPF  ET E I   I+ GKI++  D   +VS EA +L+
Sbjct: 177 GHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPED--VEVSDEAIDLI 234

Query: 319 KNMLDPNPYNRL---TLEEVLENPWIKN 343
             +L P+P  RL   ++EE+  +P+ K 
Sbjct: 235 SKLLVPDPEKRLGAKSIEEIKNHPFFKG 262

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  181 bits (461), Expect = 4e-53
 Identities = 87/263 (33%), Positives = 140/263 (53%), Gaps = 14/263 (5%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
            +   +++G+G FG  ++     TG+  A K I   KL+++   + +  E++I++   KH
Sbjct: 1   LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVI---KLESKEKKEKIINEIQILKKC-KH 56

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHE 200
           PNIV Y  +Y  KD +++VME C GG L D + +     TE   A V K +L+ ++  H 
Sbjct: 57  PNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHS 116

Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-N 259
           NG++HRD+K  N L    + + ++K IDFGLS      +    +VG+PY+MAPEV+    
Sbjct: 117 NGIIHRDIKAANILL---TSDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKP 173

Query: 260 YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR-GKIDFERDPWP-KVSKEAKEL 317
           Y  + D+WS G+    L  G PP+   +E     A+ +           P K S E K+ 
Sbjct: 174 YDYKADIWSLGITAIELAEGKPPY---SELPPMKALFKIATNGPPGLRNPEKWSDEFKDF 230

Query: 318 VKNMLDPNPYNRLTLEEVLENPW 340
           +K  L  NP  R T E++L++P+
Sbjct: 231 LKKCLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  178 bits (455), Expect = 5e-52
 Identities = 83/269 (30%), Positives = 136/269 (50%), Gaps = 18/269 (6%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           ++T G+ LGRG FG  +   + +TGE  A K + +    +E +++ + RE+ I+  L +H
Sbjct: 1   EWTRGELLGRGSFGSVYLALDKDTGELMAVKSV-ELSGDSEEELEALEREIRILSSL-QH 58

Query: 142 PNIVTYKEAY--EDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           PNIV Y  +   E+K+ + + +E   GG L   +   G   E       + IL  +   H
Sbjct: 59  PNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLH 118

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL 256
            NG++HRD+K  N L      +  +K  DFG +      E       + G+PY+MAPEV+
Sbjct: 119 SNGIVHRDIKGANILV---DSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVI 175

Query: 257 RRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAH--AIIRGKIDFERDPWPK-VSK 312
           R   YG   D+WS G  +  +  G PP W+E    +A    I       E    P+ +S+
Sbjct: 176 RGEEYGRAADIWSLGCTVIEMATGKPP-WSELGNPMAALYKIGSSG---EPPEIPEHLSE 231

Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           EAK+ ++  L  +P  R T +E+L++P++
Sbjct: 232 EAKDFLRKCLRRDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  173 bits (440), Expect = 5e-50
 Identities = 86/265 (32%), Positives = 142/265 (53%), Gaps = 16/265 (6%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
            Y  G  +GRG FG+ ++   +ETG+  A K+I+ EK+K E  +  + +E++++++L KH
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEE-ALKSIMQEIDLLKNL-KH 58

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           PNIV Y  + E  D++Y+++E  E G L   I   G + E   A     +L+ +   HE 
Sbjct: 59  PNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQ 118

Query: 202 GVMHRDLKPENFLF-ADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLRRN 259
           GV+HRD+K  N L   DG     +K  DFG++       +    +VG+PY+MAPEV+  +
Sbjct: 119 GVIHRDIKAANILTTKDGV----VKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMS 174

Query: 260 YGPEI--DVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKE 316
            G     D+WS G  +  LL G PP++          I++     +  P P+ +S E K+
Sbjct: 175 -GASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQD----DHPPLPEGISPELKD 229

Query: 317 LVKNMLDPNPYNRLTLEEVLENPWI 341
            +      +P  R T +++L++PWI
Sbjct: 230 FLMQCFQKDPNLRPTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  172 bits (438), Expect = 2e-49
 Identities = 83/285 (29%), Positives = 128/285 (44%), Gaps = 31/285 (10%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D + FGK +G G F       E ET + YA K + K +L  E  +  V+ E E++  L  
Sbjct: 1   DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNG 60

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP I+     ++D++ +Y V+E    GEL   I   G   E+        IL  ++  H 
Sbjct: 61  HPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHS 120

Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP-------GEQFCEI--------- 244
            G++HRDLKPEN L     ++  +K  DFG +    P             I         
Sbjct: 121 KGIIHRDLKPENILL---DKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRR 177

Query: 245 -----VGSPYYMAPEVLRRNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRG 298
                VG+  Y++PE+L     G   D+W+ G IIY +L G PPF    E      I++ 
Sbjct: 178 RFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKL 237

Query: 299 KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           +  F     P    +AK+L++ +L  +P +RL + E  +   +K 
Sbjct: 238 EYSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDE--LKA 276

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score =  170 bits (432), Expect = 2e-48
 Identities = 85/269 (31%), Positives = 137/269 (50%), Gaps = 18/269 (6%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D + F K LG G FG         +G+ YA K ++K K+     ++ V  E  I++ + +
Sbjct: 1   DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-R 59

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP +V    +++D   +YLVME   GGELF  +   G + E  A      ++  ++  H 
Sbjct: 60  HPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHS 119

Query: 201 NGVMHRDLKPENFLF-ADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV-LRR 258
             +++RDLKPEN L  +DG     +K  DFG +   K       + G+P Y+APE+ L +
Sbjct: 120 LDIVYRDLKPENLLLDSDGY----IKITDFGFAKRVKGRT--YTLCGTPEYLAPEIILSK 173

Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            YG  +D W+ G++IY +L G PPF+ +    I   I+ GK+ F        S +AK+L+
Sbjct: 174 GYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPS----FFSPDAKDLI 229

Query: 319 KNMLDPNPYNRL-TL----EEVLENPWIK 342
           +N+L  +   RL  L     ++  +PW  
Sbjct: 230 RNLLQVDLTKRLGNLKNGVNDIKNHPWFA 258

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score =  168 bits (427), Expect = 9e-48
 Identities = 89/291 (30%), Positives = 134/291 (46%), Gaps = 39/291 (13%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           +Y     +G G  GI  +  + ETGET A KK+A  +L+  I  +   RE++ ++   +H
Sbjct: 1   RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIP-NQALREIKALQAC-QH 58

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHE 200
           P +V   + +       LVME     +L + + ++     E    +  + +L+ V   H 
Sbjct: 59  PYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHA 117

Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE--QFCEIVGSPYYMAPEVL-- 256
           NG+MHRDLKP N L    S +  LK  DFGL+  F   E   +   V + +Y APE+L  
Sbjct: 118 NGIMHRDLKPANLLI---SADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYG 174

Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAIIR------------------ 297
            R Y P +D+W+ G I   LL G P F  E + E +A  + R                  
Sbjct: 175 ARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLA-IVFRTLGTPNEETWPGLTSLPD 233

Query: 298 -GKIDFE---RDPW----PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
             KI F      P     P  S EA +L+K +L  +P  RL+  E L +P+
Sbjct: 234 YNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPY 284

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score =  165 bits (420), Expect = 4e-47
 Identities = 94/274 (34%), Positives = 135/274 (49%), Gaps = 23/274 (8%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
            Y   + +G+G FG   +      G+    K+I    + TE +   +  EV I+R L KH
Sbjct: 1   DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILREL-KH 58

Query: 142 PNIVTYKEAYEDKDA--IYLVMELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIV 195
           PNIV Y +   D+    +Y+VME CEGG+L   I      + +  E     +   +L  +
Sbjct: 59  PNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLAL 118

Query: 196 KVCH-----ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPY 249
             CH      N V+HRDLKP N +F D + N +L   DFGL+        F +  VG+PY
Sbjct: 119 YECHNRSDPGNTVLHRDLKPAN-IFLDANNNVKLG--DFGLAKILGHDSSFAKTYVGTPY 175

Query: 250 YMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP 308
           YM+PE L    Y  + D+WS G +IY L    PPF A  +  +A  I  GK        P
Sbjct: 176 YMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFR----RIP 231

Query: 309 KV-SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
              S E  E++K+ML+ +P  R + EE+L+ P I
Sbjct: 232 YRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  166 bits (419), Expect = 7e-46
 Identities = 82/284 (28%), Positives = 130/284 (45%), Gaps = 28/284 (9%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
            Y   ++LG G FG  +   + +     A K +AK+      +++   RE++I+  L   
Sbjct: 1   SYRILRKLGEGSFGEVYLARDRKL---VALKVLAKKLESKSKEVERFLREIQILASLNHP 57

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH---YTERAAAAVGKTILRIVKVC 198
           PNIV   + ++D+ ++YLVME  +GG L D +   G     +E  A  +   IL  ++  
Sbjct: 58  PNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYL 117

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ-------FCEIVGSPYYM 251
           H  G++HRD+KPEN L     +   +K IDFGL+                   VG+P YM
Sbjct: 118 HSKGIIHRDIKPENILL--DRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYM 175

Query: 252 APEVLR----RNYGPEIDVWSAGVIIYILLCGVPPF-----WAETEEGIAHAIIRG---- 298
           APEVL            D+WS G+ +Y LL G+PPF      + T + +   +       
Sbjct: 176 APEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSL 235

Query: 299 KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
                      +SK A +L+K +L  +P NRL+    L +  + 
Sbjct: 236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLA 279

Length = 384

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  160 bits (406), Expect = 9e-45
 Identities = 92/283 (32%), Positives = 149/283 (52%), Gaps = 15/283 (5%)

Query: 64  SFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEI 123
              L+ +VS   EG+  + Y   +++G G  G  ++  +  TG+  A KK+   K   E+
Sbjct: 5   KAALKDIVS---EGDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKEL 61

Query: 124 DIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTER 182
            I     E+ IM+   KHPNIV Y ++Y   D +++VME  +GG L D I  N     E 
Sbjct: 62  II----NEILIMKDC-KHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEP 116

Query: 183 AAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQF 241
             A V + +L+ ++  H   V+HRD+K +N L    S++  +K  DFG +    K   + 
Sbjct: 117 QIAYVCREVLQGLEYLHSQNVIHRDIKSDNILL---SKDGSVKLADFGFAAQLTKEKSKR 173

Query: 242 CEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI 300
             +VG+PY+MAPEV++R  YGP++D+WS G++   +  G PP+  E        I    I
Sbjct: 174 NSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGI 233

Query: 301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
              ++P  K S E K+ +   L  +P  R + EE+L++P++K 
Sbjct: 234 PPLKNP-EKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score =  160 bits (406), Expect = 5e-44
 Identities = 95/298 (31%), Positives = 143/298 (47%), Gaps = 39/298 (13%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D +   K +GRG FG      + +TG+ YA K + K  +     I  VR E +I+     
Sbjct: 1   DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILAD-AD 59

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
            P IV    +++D++ +YLVME   GG+L + ++ K  + E  A      ++  +   H+
Sbjct: 60  SPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHK 119

Query: 201 NGVMHRDLKPENFLF-ADGSENSQLKAIDFGLS--------------------------I 233
            G +HRD+KP+N L  ADG     +K  DFGL                           +
Sbjct: 120 LGFIHRDIKPDNILIDADG----HIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLV 175

Query: 234 FFKPGEQ----FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
             +  +Q        VG+P Y+APEVLR   YG E D WS GVI+Y +L G PPF+++T 
Sbjct: 176 RRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235

Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLT-LEEVLENPWIKNDN 345
           +   + II  K      P P VS EA +L+  +L   P +RL   EE+  +P+ K  +
Sbjct: 236 QETYNKIINWKESLRFPPDPPVSPEAIDLICRLLCD-PEDRLGSFEEIKSHPFFKGID 292

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  156 bits (397), Expect = 2e-43
 Identities = 79/289 (27%), Positives = 135/289 (46%), Gaps = 37/289 (12%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y   ++LG G +G+ ++  + +TGE  A KKI  +  +  I    +R E+ +++ L KHP
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALR-EISLLKEL-KHP 58

Query: 143 NIVTYKEAYEDKDAIYLVMELCEG--GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           NIV   +    +  +YLV E C+    +  D+    G  +     ++   +LR +  CH 
Sbjct: 59  NIVKLLDVIHTERKLYLVFEYCDMDLKKYLDK--RPGPLSPNLIKSIMYQLLRGLAYCHS 116

Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVL--R 257
           + ++HRDLKP+N L    + +  LK  DFGL+  F  P   +   V + +Y APE+L   
Sbjct: 117 HRILHRDLKPQNILI---NRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGS 173

Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR------------------GK 299
           ++Y   +D+WS G I   ++ G P F  ++E      I +                   K
Sbjct: 174 KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYK 233

Query: 300 IDF---ERDPW----PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
             F            P++  E  +L+  ML  NP  R++ +E L++P+ 
Sbjct: 234 PTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score =  155 bits (395), Expect = 2e-43
 Identities = 83/263 (31%), Positives = 135/263 (51%), Gaps = 20/263 (7%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD-VRREVEIMRHLPKHPNIVTY 147
           LG G FG            T+A K + K  +  E    + +  E EI+     HP IV  
Sbjct: 1   LGVGGFGRVELVKVKSKNRTFALKCVKKRHI-VETGQQEHIFSEKEILEEC-NHPFIVKL 58

Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRD 207
              ++DK  IY++ME C GGEL+  + ++G + E  A      ++   +  H  G+++RD
Sbjct: 59  YRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRD 118

Query: 208 LKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDV 266
           LKPEN L      N  +K +DFG +   K G++     G+P Y+APE+ L + Y   +D 
Sbjct: 119 LKPENLLL---DSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDY 175

Query: 267 WSAGVIIYILLCGVPPFWAETEEGIA--HAIIRG--KIDFERDPWPKVSKEAKELVKNML 322
           WS G+++Y LL G PPF  + E+ +   + I++G  K++F       + K AK+L+K +L
Sbjct: 176 WSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPN----YIDKAAKDLIKQLL 231

Query: 323 DPNPYNRL-----TLEEVLENPW 340
             NP  RL      ++++ ++ W
Sbjct: 232 RRNPEERLGNLKGGIKDIKKHKW 254

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score =  153 bits (389), Expect = 1e-42
 Identities = 77/270 (28%), Positives = 131/270 (48%), Gaps = 24/270 (8%)

Query: 86  GKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV 145
           G ++G G FG  +    ++TGE  A K+I  +    +  I ++  E++++  L KHPN+V
Sbjct: 5   GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKT-IKEIADEMKVLELL-KHPNLV 62

Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMH 205
            Y      ++ +Y+ ME C GG L + + +     E         +L  +   H +G++H
Sbjct: 63  KYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVH 122

Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFKP-----GEQFCEIVGSPYYMAPEVLRRN- 259
           RD+KP N        N  +K  DFG ++  K      GE+   + G+P YMAPEV+    
Sbjct: 123 RDIKPANIFLDH---NGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGK 179

Query: 260 ---YGPEIDVWSAGVIIYILLCGVPPFWAE--TEEGIAHAIIRGKIDFERDPWP---KVS 311
              +G   D+WS G ++  +  G  P W+E   E  I   +  G     + P P   ++S
Sbjct: 180 GKGHGRAADIWSLGCVVLEMATGKRP-WSELDNEFQIMFHVGAG----HKPPIPDSLQLS 234

Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
            E K+ +   L+ +P  R T  E+L++P++
Sbjct: 235 PEGKDFLDRCLESDPKKRPTASELLQHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score =  151 bits (384), Expect = 5e-42
 Identities = 80/263 (30%), Positives = 133/263 (50%), Gaps = 10/263 (3%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K + +G FG  +   +  TG+ +A K + K  +  +  + +V+ E  IM    + P +  
Sbjct: 2   KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAK 61

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
              +++ KD +YLVME   GG+    I   G   E  A      ++  V+  H+ G++HR
Sbjct: 62  LYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHR 121

Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEI-D 265
           D+KPEN L     +   LK  DFGLS   + G +  + VG+P Y+APE +      ++ D
Sbjct: 122 DIKPENLLI---DQTGHLKLTDFGLS---RNGLENKKFVGTPDYLAPETILGVGDDKMSD 175

Query: 266 VWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPN 325
            WS G +I+  L G PPF AET + +   I+  +I++  +     S EA +L+  +L  +
Sbjct: 176 WWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMD 235

Query: 326 PYNRL---TLEEVLENPWIKNDN 345
           P  RL     +E+  +P+ K+ N
Sbjct: 236 PAKRLGANGYQEIKSHPFFKSIN 258

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score =  149 bits (378), Expect = 4e-41
 Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 14/258 (5%)

Query: 90  GRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKE 149
           G+G FG      + +T + +A K + K+K   +  + +V  E  I++ L  HP +V    
Sbjct: 9   GKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-NHPFLVNLWY 67

Query: 150 AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLK 209
           +++D++ +YLV++L  GG+L   +  K  ++E         I+  ++  H  G++HRD+K
Sbjct: 68  SFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIK 127

Query: 210 PENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL-RRNYGPEIDVWS 268
           P+N L     E   +   DF ++    P        G+P YMAPEVL R+ Y   +D WS
Sbjct: 128 PDNILL---DEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWS 184

Query: 269 AGVIIYILLCGVPPFWA---ETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPN 325
            GV  Y  L G  P+        + I        + +        S EA + +  +L+ +
Sbjct: 185 LGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLY----PATWSTEAIDAINKLLERD 240

Query: 326 PYNRL--TLEEVLENPWI 341
           P  RL   L+++  +P+ 
Sbjct: 241 PQKRLGDNLKDLKNHPYF 258

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  145 bits (367), Expect = 2e-39
 Identities = 80/293 (27%), Positives = 129/293 (44%), Gaps = 44/293 (15%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR--REVEIMRHLPK 140
           Y    ++G G +G+ ++  +  TGE  A KKI   KL+ E +       RE+++++ L  
Sbjct: 1   YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKI---KLRFESEGIPKTALREIKLLKEL-N 56

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
           HPNI+   + +  K  +YLV E  +    +L      +    E    +    +L+ +  C
Sbjct: 57  HPNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKD--RQRGLPESLIKSYLYQLLQGLAFC 114

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVL- 256
           H +G++HRDLKPEN L    +    LK  DFGL+  F  P   +   V + +Y APE+L 
Sbjct: 115 HSHGILHRDLKPENLLI---NTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLL 171

Query: 257 -RRNYGPEIDVWSAGVIIYILLCGVPPF-----------------------WAETEEGIA 292
             + Y   +D+WS G I   LL   P F                       W +      
Sbjct: 172 GDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLAR 231

Query: 293 HAIIRGKIDFERDPWPKV----SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           +            P PK+    S +A +L+  ML  +P+ R+T E+ L +P+ 
Sbjct: 232 NYKFSFP-KKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score =  144 bits (366), Expect = 5e-39
 Identities = 90/294 (30%), Positives = 135/294 (45%), Gaps = 37/294 (12%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID-ID-DVRREVEIMRHLP 139
           +Y  GK+LG G + + ++  + ETG   A KKI   + K   D I+    RE+++++ L 
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL- 59

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVC 198
           KHPNI+   + +  K  I LV E  E  +L   I +K    T     +     LR ++  
Sbjct: 60  KHPNIIGLLDVFGHKSNINLVFEFMET-DLEKVIKDKSIVLTPADIKSYMLMTLRGLEYL 118

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVL- 256
           H N ++HRDLKP N L A    +  LK  DFGL+  F  P  +    V + +Y APE+L 
Sbjct: 119 HSNWILHRDLKPNNLLIAS---DGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLF 175

Query: 257 -RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----------------TEEGIAHA----- 294
             R+YG  +D+WS G I   LL  VP    +                TEE          
Sbjct: 176 GARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPD 235

Query: 295 ----IIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
                        +  +P  S +A +L++ +L  NP  R+T  + LE+P+  ND
Sbjct: 236 YVEFKPFPPTPL-KQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSND 288

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score =  137 bits (348), Expect = 3e-36
 Identities = 86/264 (32%), Positives = 130/264 (49%), Gaps = 13/264 (4%)

Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           ++G+G +G      + +TGE  A K++ K  L    ++  V  E +I+    K   +V  
Sbjct: 8   QVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTT-TKSEWLVKL 66

Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRD 207
             A++D + +YL ME   GG+    + N G  +E  A      +   V   HE G +HRD
Sbjct: 67  LYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRD 126

Query: 208 LKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDV 266
           LKPENFL      +  +K  DFGLS           +VGSP YMAPEVLR + Y   +D 
Sbjct: 127 LKPENFLI---DASGHIKLTDFGLSKGIV--TYANSVVGSPDYMAPEVLRGKGYDFTVDY 181

Query: 267 WSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER----DPWPKVSKEAKELVKNML 322
           WS G ++Y  LCG PPF   T       +   K   +R    DP   +S EA +L+  ++
Sbjct: 182 WSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLI 241

Query: 323 DPNPYNRL-TLEEVLENPWIKNDN 345
           + +P  R  +LE++  +P+ K  +
Sbjct: 242 N-DPSRRFGSLEDIKNHPFFKEVD 264

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score =  135 bits (341), Expect = 6e-36
 Identities = 80/275 (29%), Positives = 131/275 (47%), Gaps = 22/275 (8%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D Y   + +G G   + +    +   E  A K+I  EK +T   +D++R+EV+ M     
Sbjct: 1   DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAM-SQCN 57

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFD---RIVNKGHYTERAAAAVGKTILRIVKV 197
           HPN+V Y  ++   D ++LVM    GG L D       +G   E   A V K +L+ ++ 
Sbjct: 58  HPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEY 117

Query: 198 CHENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLS-IFFKPGEQFCE----IVGSPYYM 251
            H NG +HRD+K  N L   DGS    +K  DFG+S      G++  +     VG+P +M
Sbjct: 118 LHSNGQIHRDIKAGNILLGEDGS----VKIADFGVSASLADGGDRTRKVRKTFVGTPCWM 173

Query: 252 APEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRG---KIDFERDP 306
           APEV+     Y  + D+WS G+    L  G  P+       +    ++     ++   D 
Sbjct: 174 APEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGAD- 232

Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           + K SK  ++++   L  +P  R T EE+L++ + 
Sbjct: 233 YKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score =  135 bits (342), Expect = 8e-36
 Identities = 91/282 (32%), Positives = 158/282 (56%), Gaps = 20/282 (7%)

Query: 66  QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEID 124
           +LR++VS    G+   KYT  +++G+G  G  +   ++ TG+  A K++  +++ K E+ 
Sbjct: 7   KLRTIVS---VGDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELI 63

Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
           I+    E+ +MR   KHPNIV Y ++Y   D +++VME   GG L D +V +    E   
Sbjct: 64  IN----EILVMREN-KHPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQI 117

Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFA-DGSENSQLKAIDFGLSIFFKPGE-QFC 242
           AAV +  L+ ++  H N V+HRD+K +N L   DGS    +K  DFG      P + +  
Sbjct: 118 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRS 173

Query: 243 EIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAI-IRGKI 300
            +VG+PY+MAPEV+ R+ YGP++D+WS G++   ++ G PP+  E      + I   G  
Sbjct: 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP 233

Query: 301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           + +     K+S   ++ +   L+ +   R + +E+L++P++K
Sbjct: 234 ELQNP--EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score =  135 bits (341), Expect = 1e-35
 Identities = 94/304 (30%), Positives = 135/304 (44%), Gaps = 61/304 (20%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
           +KY     +G G +G+  +C    TGE  A KK      K   D +DV+    REV+++R
Sbjct: 1   NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKK-----FKESEDDEDVKKTALREVKVLR 55

Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTER-----AAAAVGKTI 191
            L +H NIV  KEA+  K  +YLV E  E   L           E         AV   I
Sbjct: 56  QL-RHENIVNLKEAFRRKGRLYLVFEYVERTLL--------ELLEASPGGLPPDAVRSYI 106

Query: 192 ---LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF--KPGEQFCEIVG 246
              L+ +  CH + ++HRD+KPEN L    SE+  LK  DFG +     +P     + V 
Sbjct: 107 WQLLQAIAYCHSHNIIHRDIKPENILV---SESGVLKLCDFGFARALRARPASPLTDYVA 163

Query: 247 SPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE---------------- 288
           + +Y APE+L    NYG  +DVW+ G I+  LL G P F  +++                
Sbjct: 164 TRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPP 223

Query: 289 ------------EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVL 336
                        G+A          ER    KVS  A + +K  L  +P  RLT +E+L
Sbjct: 224 SHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELL 283

Query: 337 ENPW 340
           ++P+
Sbjct: 284 QHPY 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score =  134 bits (338), Expect = 1e-35
 Identities = 76/258 (29%), Positives = 133/258 (51%), Gaps = 14/258 (5%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K+LG+G +G  ++   +   + YA K+       ++ + +D   E+ I+  +  HPNI++
Sbjct: 6   KKLGKGSYGSVYKVKRLSDNQFYALKE-VDLGSMSQKEREDAVNEIRILASV-NHPNIIS 63

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHENG 202
           YKEA+ D + + +VME    G+L   I      +    E+    +   +LR ++  HE  
Sbjct: 64  YKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK 123

Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYG 261
           ++HRDLK  N L      N  +K  D G+S   K      +I G+P+YMAPEV + R Y 
Sbjct: 124 ILHRDLKSANILLVA---NDLVKIGDLGISKVLKKNMAKTQI-GTPHYMAPEVWKGRPYS 179

Query: 262 PEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNM 321
            + D+WS G ++Y +    PPF A + + + + + RGK  +   P P  S++ +  +++M
Sbjct: 180 YKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGK--YPPIP-PIYSQDLQNFIRSM 236

Query: 322 LDPNPYNRLTLEEVLENP 339
           L   P  R   +++L +P
Sbjct: 237 LQVKPKLRPNCDKILASP 254

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score =  134 bits (338), Expect = 3e-35
 Identities = 90/294 (30%), Positives = 134/294 (45%), Gaps = 44/294 (14%)

Query: 67  LRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDID 126
           L+ VV      + LD +    ++G G  GI     +  TG   A KK+   K +      
Sbjct: 8   LQLVVDPGDPRSYLDNFV---KIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQ------ 58

Query: 127 DVRRE-----VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTE 181
             RRE     V IMR    HPNIV    +Y   D +++VME  EGG L D IV      E
Sbjct: 59  --RRELLFNEVVIMRDYQ-HPNIVEMYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNE 114

Query: 182 RAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF 241
              A V   +L+ +   H  GV+HRD+K ++ L      + ++K  DFG          F
Sbjct: 115 EQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLT---SDGRVKLSDFG----------F 161

Query: 242 C-----------EIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEE 289
           C            +VG+PY+MAPEV+ R  YG E+D+WS G+++  ++ G PP++ E   
Sbjct: 162 CAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL 221

Query: 290 GIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                I        ++   KVS   +  +  ML  +P  R T  E+L +P++  
Sbjct: 222 QAMKRIRDNLPPKLKNL-HKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAK 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score =  133 bits (337), Expect = 3e-35
 Identities = 85/272 (31%), Positives = 134/272 (49%), Gaps = 19/272 (6%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKH---PNI 144
           +GRG +G  ++   + TG   A K I    L T + D+ D++REV ++  L +    PNI
Sbjct: 9   IGRGAYGAVYRGKHVPTGRVVALKII---NLDTPDDDVSDIQREVALLSQL-RQSQPPNI 64

Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGV 203
             Y  +Y     ++++ME  EGG +  R + K G   E+  + + + +L  +K  H+ GV
Sbjct: 65  TKYYGSYLKGPRLWIIMEYAEGGSV--RTLMKAGPIAEKYISVIIREVLVALKYIHKVGV 122

Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCEIVGSPYYMAPEVLR--RNY 260
           +HRD+K  N L    +    +K  DFG++        +    VG+PY+MAPEV+   + Y
Sbjct: 123 IHRDIKAANILV---TNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYY 179

Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
             + D+WS G+ IY +  G PP+           I + K    R      SK  +E V  
Sbjct: 180 DTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKP--PRLEDNGYSKLLREFVAA 237

Query: 321 MLDPNPYNRLTLEEVLENPWIKNDNHAPNVSL 352
            LD  P  RL+ EE+L++ WIK  +  P   L
Sbjct: 238 CLDEEPKERLSAEELLKSKWIKAHSKTPVSIL 269

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score =  133 bits (335), Expect = 2e-34
 Identities = 85/274 (31%), Positives = 143/274 (52%), Gaps = 31/274 (11%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKL--KTEIDIDDVRREVEIMRHLPKHPNIVT 146
           +G+G FG  +Q  + +T   YA K ++K+++  K E+      R + +   L + P IV 
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVG 60

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTE-RAAAAVGKTILRIVKVCHENGVMH 205
            K +++    +YLV +   GGELF  +  +G ++E RA   + + +L +  + H+  +++
Sbjct: 61  LKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHL-HKYDIVY 119

Query: 206 RDLKPENFLF-ADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMAPEVL- 256
           RDLKPEN L  A G     +   DFGLS   K           FC   G+  Y+APEVL 
Sbjct: 120 RDLKPENILLDATG----HIALCDFGLS---KANLTDNKTTNTFC---GTTEYLAPEVLL 169

Query: 257 -RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
             + Y   +D WS GV+++ + CG  PF+AE  + +   I  GK+ F ++    +S E +
Sbjct: 170 DEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKN---VLSDEGR 226

Query: 316 ELVKNMLDPNPYNRL----TLEEVLENPWIKNDN 345
           + VK +L+ NP +RL       E+ E+P+  + +
Sbjct: 227 QFVKGLLNRNPQHRLGAHRDAVELKEHPFFADID 260

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score =  128 bits (325), Expect = 9e-34
 Identities = 72/267 (26%), Positives = 124/267 (46%), Gaps = 22/267 (8%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD-----VRREVEIMRHLPKH 141
           K LG+G  G+ ++     TG+ YA KKI        +D D+     + RE++ +R     
Sbjct: 7   KVLGQGSSGVVYKVRHKPTGKIYALKKIH-------VDGDEEFRKQLLRELKTLRSCE-S 58

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH-E 200
           P +V    A+  +  I +V+E  +GG L D +   G   E   A + + IL+ +   H +
Sbjct: 59  PYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTK 118

Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC-EIVGSPYYMAPEVLR-R 258
             ++HRD+KP N L    +   ++K  DFG+S   +     C   VG+  YM+PE ++  
Sbjct: 119 RHIIHRDIKPSNLLI---NSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGE 175

Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK--VSKEAKE 316
           +Y    D+WS G+ +     G  PF    +      +++   D      P    S E ++
Sbjct: 176 SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFF-ELMQAICDGPPPSLPAEEFSPEFRD 234

Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKN 343
            +   L  +P  R +  E+L++P+IK 
Sbjct: 235 FISACLQKDPKKRPSAAELLQHPFIKK 261

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score =  129 bits (326), Expect = 1e-33
 Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 15/247 (6%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K +G G FG  H   +  +   YA K +A  ++        V  E  +++ +  HP I+ 
Sbjct: 7   KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV-SHPFIIR 65

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
                 D+  +Y++ME   GGELF  + N G ++          I+  ++  H   +++R
Sbjct: 66  LFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYR 125

Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL-RRNYGPEID 265
           DLKPEN L     +   +K  DFG +   K  ++   + G+P Y+APEV+  + +   +D
Sbjct: 126 DLKPENILL---DKEGHIKLTDFGFAK--KLRDRTWTLCGTPEYLAPEVIQSKGHNKAVD 180

Query: 266 VWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER--DPWPKVSKEAKELVKNMLD 323
            W+ G++IY +L G PPF+ +   GI   I+ GK++F R  D +      AK+L+K +L 
Sbjct: 181 WWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRHLDLY------AKDLIKKLLV 234

Query: 324 PNPYNRL 330
            +   RL
Sbjct: 235 VDRTRRL 241

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score =  127 bits (321), Expect = 3e-33
 Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 18/264 (6%)

Query: 86  GKELGRGEFGITHQCFEIETGETYACK--KIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           G+ LG G FG  ++   ++ G+ +A K   +A +    +  +  + +E+ ++  L +HPN
Sbjct: 5   GELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-QHPN 63

Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGV 203
           IV Y     ++D +Y+ +EL  GG L   +   G + E       + IL  ++  H+   
Sbjct: 64  IVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNT 123

Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI---VGSPYYMAPEVLRR-- 258
           +HRD+K  N L      N  +K  DFG++   K   +F       GSPY+MAPEV+ +  
Sbjct: 124 VHRDIKGANILV---DTNGVVKLADFGMA---KQVVEFSFAKSFKGSPYWMAPEVIAQQG 177

Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            YG   D+WS G  +  +  G PP+           I R K   E  P P  +S EAK+ 
Sbjct: 178 GYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK---ELPPIPDHLSDEAKDF 234

Query: 318 VKNMLDPNPYNRLTLEEVLENPWI 341
           +   L  +P  R T  E+LE+P++
Sbjct: 235 ILKCLQRDPSLRPTAAELLEHPFV 258

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score =  128 bits (324), Expect = 5e-33
 Identities = 77/252 (30%), Positives = 127/252 (50%), Gaps = 11/252 (4%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L  +  G+ LG G FG         TGE YA K + K ++     +  V +E  I+  L 
Sbjct: 17  LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL- 75

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
            HP IV    +++D++ +Y ++E   GGELF  +   G +    A      ++   +  H
Sbjct: 76  SHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLH 135

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              +++RDLKPEN L  D   +  +K  DFG +   K  ++   + G+P Y+APEV++ +
Sbjct: 136 SKDIIYRDLKPENLLL-DNKGH--VKVTDFGFAK--KVPDRTFTLCGTPEYLAPEVIQSK 190

Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            +G  +D W+ GV++Y  + G PPF+ +T   I   I+ G++ F    W      A++LV
Sbjct: 191 GHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN--W--FDGRARDLV 246

Query: 319 KNMLDPNPYNRL 330
           K +L  +   RL
Sbjct: 247 KGLLQTDHTKRL 258

Length = 329

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score =  127 bits (321), Expect = 5e-33
 Identities = 90/281 (32%), Positives = 157/281 (55%), Gaps = 18/281 (6%)

Query: 66  QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEID 124
           +LRS+VS    G+   KYT  +++G+G  G  +   ++ TG+  A +++  +++ K E+ 
Sbjct: 8   KLRSIVS---VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI 64

Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
           I+    E+ +MR   K+PNIV Y ++Y   D +++VME   GG L D +V +    E   
Sbjct: 65  IN----EILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQI 118

Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFA-DGSENSQLKAIDFGLSIFFKPGE-QFC 242
           AAV +  L+ ++  H N V+HRD+K +N L   DGS    +K  DFG      P + +  
Sbjct: 119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRS 174

Query: 243 EIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
            +VG+PY+MAPEV+ R+ YGP++D+WS G++   ++ G PP+  E      + I      
Sbjct: 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 234

Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
             ++P  K+S   ++ +   LD +   R + +E+L++ ++K
Sbjct: 235 ELQNP-EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score =  127 bits (321), Expect = 6e-33
 Identities = 92/295 (31%), Positives = 139/295 (47%), Gaps = 50/295 (16%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR--REVEIMRHLPK 140
           Y   K+LG G FG  +     ETGE  A KK+ K+K  +    ++    REV+ +R L +
Sbjct: 1   YKVIKQLGDGTFGSVYLARNKETGELVAIKKM-KKKFYS---WEECMNLREVKSLRKLNE 56

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIV--NKGHYTERAAAAVGKTILRIVKVC 198
           HPNIV  KE + + D +Y V E  E G L+  +       ++E    ++   IL+ +   
Sbjct: 57  HPNIVKLKEVFRENDELYFVFEYME-GNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHI 115

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPYYMAPEVL 256
           H++G  HRDLKPEN L    S    +K  DFGL+  I  +P   + + V + +Y APE+L
Sbjct: 116 HKHGFFHRDLKPENLLV---SGPEVVKIADFGLAREIRSRP--PYTDYVSTRWYRAPEIL 170

Query: 257 RR--NYGPEIDVWSAGVI---IYIL---------------LCGV--PPFWAETEEGIAHA 294
            R  +Y   +D+W+ G I   +Y L               +C V   P   +  EG   A
Sbjct: 171 LRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLA 230

Query: 295 IIRGKIDF---------ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
               K+ F              P  S EA +L+K+ML  +P  R T  + L++P+
Sbjct: 231 ---SKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPY 282

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score =  127 bits (321), Expect = 6e-33
 Identities = 91/281 (32%), Positives = 157/281 (55%), Gaps = 18/281 (6%)

Query: 66  QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEID 124
           +LRS+VS    G+   KYT  +++G+G  G  +   +I TG+  A K++  +++ K E+ 
Sbjct: 7   KLRSIVS---VGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELI 63

Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
           I+    E+ +MR   K+PNIV Y ++Y   D +++VME   GG L D +V +    E   
Sbjct: 64  IN----EILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQI 117

Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFA-DGSENSQLKAIDFGLSIFFKPGE-QFC 242
           AAV +  L+ +   H N V+HRD+K +N L   DGS    +K  DFG      P + +  
Sbjct: 118 AAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRS 173

Query: 243 EIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
            +VG+PY+MAPEV+ R+ YGP++D+WS G++   ++ G PP+  E      + I      
Sbjct: 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP 233

Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
             ++P  ++S   ++ +   L+ +   R + +E+L++P++K
Sbjct: 234 ELQNP-ERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score =  126 bits (319), Expect = 2e-32
 Identities = 84/251 (33%), Positives = 125/251 (49%), Gaps = 20/251 (7%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP--KHPNI 144
           K LG+G FG      E  TG+ YA K + KE +   I  D+V   +   R L   +HP +
Sbjct: 1   KLLGKGTFGKVILVREKATGKYYAMKILKKEVI---IAKDEVAHTLTESRVLQNTRHPFL 57

Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
              K +++  D +  VME   GGELF  +  +  ++E  A   G  I+  +   H   V+
Sbjct: 58  TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVV 117

Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLS----IFFKPGEQFCEIVGSPYYMAPEVLRRN- 259
           +RDLK EN +     ++  +K  DFGL           + FC   G+P Y+APEVL  N 
Sbjct: 118 YRDLKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFC---GTPEYLAPEVLEDND 171

Query: 260 YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK 319
           YG  +D W  GV++Y ++CG  PF+ +  E +   I+  +I F R     +S EAK L+ 
Sbjct: 172 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLSPEAKSLLA 227

Query: 320 NMLDPNPYNRL 330
            +L  +P  RL
Sbjct: 228 GLLKKDPKQRL 238

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score =  125 bits (315), Expect = 3e-32
 Identities = 75/278 (26%), Positives = 136/278 (48%), Gaps = 19/278 (6%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + +T  + +G+G FG  ++  +  T +  A K I  E  + E +I+D+++E++ +    +
Sbjct: 1   ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLE--EAEDEIEDIQQEIQFLSQC-R 57

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
            P I  Y  ++     ++++ME C GG   D ++  G   E   A + + +L  ++  HE
Sbjct: 58  SPYITKYYGSFLKGSKLWIIMEYCGGGSCLD-LLKPGKLDETYIAFILREVLLGLEYLHE 116

Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFG----LSIFFKPGEQFCEIVGSPYYMAPEVL 256
            G +HRD+K  N L    SE   +K  DFG    L+        F   VG+P++MAPEV+
Sbjct: 117 EGKIHRDIKAANILL---SEEGDVKLADFGVSGQLTSTMSKRNTF---VGTPFWMAPEVI 170

Query: 257 RRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWPKVSKEA 314
           +++ Y  + D+WS G+    L  G PP        +   I +      E + +   SK  
Sbjct: 171 KQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKF---SKPF 227

Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSL 352
           K+ V   L+ +P  R + +E+L++ +IK       ++L
Sbjct: 228 KDFVSLCLNKDPKERPSAKELLKHKFIKKAKKTSYLTL 265

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score =  123 bits (311), Expect = 5e-32
 Identities = 83/265 (31%), Positives = 134/265 (50%), Gaps = 25/265 (9%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           +Y   + +G G FG       + + + YA K+I   K  +   ++D R+E  ++  + KH
Sbjct: 1   QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKM-KH 57

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILR-IVKVC-- 198
           PNIV +KE++E    +Y+VME C+GG+L  +I       +R       TIL+  V++C  
Sbjct: 58  PNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKL-----QRGKLFPEDTILQWFVQMCLG 112

Query: 199 ----HENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAP 253
               HE  V+HRD+K +N      ++N ++K  DFG + +   PG   C  VG+PYY+ P
Sbjct: 113 VQHIHEKRVLHRDIKSKNIFL---TQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPP 169

Query: 254 EVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP-KVS 311
           E+     Y  + D+WS G I+Y L     PF A + + +   + +G       P P   S
Sbjct: 170 EIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSY----KPLPSHYS 225

Query: 312 KEAKELVKNMLDPNPYNRLTLEEVL 336
            E + L+K M   NP +R +   +L
Sbjct: 226 YELRSLIKQMFKRNPRSRPSATTIL 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score =  123 bits (310), Expect = 8e-32
 Identities = 82/274 (29%), Positives = 141/274 (51%), Gaps = 32/274 (11%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           KY   K++G G FG        E G+ Y  K+I   K+  + + ++ R+EV ++ ++ KH
Sbjct: 1   KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPK-EREESRKEVAVLSNM-KH 58

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILR-IVKVC-- 198
           PNIV Y+E++E+   +Y+VM+ CEGG+L+ +I       +R        IL   V++C  
Sbjct: 59  PNIVQYQESFEENGNLYIVMDYCEGGDLYKKINA-----QRGVLFPEDQILDWFVQICLA 113

Query: 199 ----HENGVMHRDLKPEN-FLFADGSENSQLKAIDFGLSIFFKPGEQFCEI-VGSPYYMA 252
               H+  ++HRD+K +N FL  DG+    +K  DFG++       +     +G+PYY++
Sbjct: 114 LKHVHDRKILHRDIKSQNIFLTKDGT----IKLGDFGIARVLNSTVELARTCIGTPYYLS 169

Query: 253 PEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV- 310
           PE+   R Y  + D+W+ G ++Y +      F A   + +   IIRG        +P V 
Sbjct: 170 PEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGS-------YPPVS 222

Query: 311 ---SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
              S + + LV  +   NP +R ++  +LE  +I
Sbjct: 223 SHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score =  125 bits (314), Expect = 8e-32
 Identities = 83/252 (32%), Positives = 128/252 (50%), Gaps = 22/252 (8%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K LG+G FG      E  TG  YA K + KE +  + ++     E  ++++  +HP +  
Sbjct: 1   KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 59

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
            K A++  D +  VME   GGELF  +  +  +TE  A   G  I+  ++  H   V++R
Sbjct: 60  LKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 119

Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMAPEVLRRN 259
           D+K EN +     ++  +K  DFGL    K G       + FC   G+P Y+APEVL  N
Sbjct: 120 DIKLENLML---DKDGHIKITDFGLC---KEGISDGATMKTFC---GTPEYLAPEVLEDN 170

Query: 260 -YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            YG  +D W  GV++Y ++CG  PF+ +  E +   I+  +I F R     +S EAK L+
Sbjct: 171 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLL 226

Query: 319 KNMLDPNPYNRL 330
             +L  +P  RL
Sbjct: 227 AGLLKKDPKQRL 238

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score =  122 bits (309), Expect = 1e-31
 Identities = 79/268 (29%), Positives = 130/268 (48%), Gaps = 23/268 (8%)

Query: 86  GKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEI--DIDDVRREVEIMRHLPKHPN 143
           GK LG+G FG  + C++++TG   A K++  +    E   +++ +  E++++++L +H  
Sbjct: 7   GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QHER 65

Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGV 203
           IV Y     D + + + ME   GG + D++   G  TE       + IL  V+  H N +
Sbjct: 66  IVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMI 125

Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC-------EIVGSPYYMAPEVL 256
           +HRD+K  N L         +K  DFG S   K  +  C        + G+PY+M+PEV+
Sbjct: 126 VHRDIKGANIL---RDSAGNVKLGDFGAS---KRLQTICSSGTGMKSVTGTPYWMSPEVI 179

Query: 257 R-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW--PKVSKE 313
               YG + DVWS G  +  +L   PP WAE E   A A I        +P     VS +
Sbjct: 180 SGEGYGRKADVWSVGCTVVEMLTEKPP-WAEFE---AMAAIFKIATQPTNPQLPSHVSPD 235

Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWI 341
           A+  ++     N   R + EE+L + ++
Sbjct: 236 ARNFLRRTFVENAKKRPSAEELLRHFFV 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score =  124 bits (314), Expect = 1e-31
 Identities = 88/301 (29%), Positives = 129/301 (42%), Gaps = 48/301 (15%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           +Y   K +G G +G+     +  TG   A KKI+       ID   + RE++++RHL +H
Sbjct: 1   RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNV-FDDLIDAKRILREIKLLRHL-RH 58

Query: 142 PNIVTYK-----EAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
            NI+         + ED + +Y+V EL E  +L   I +    T+         ILR +K
Sbjct: 59  ENIIGLLDILRPPSPEDFNDVYIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLK 117

Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS----IFFKPGEQFCEIVGSPYYMA 252
             H   V+HRDLKP N L    + N  LK  DFGL+              E V + +Y A
Sbjct: 118 YLHSANVIHRDLKPSNILV---NSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRA 174

Query: 253 PEVL--RRNYGPEIDVWSAGVII--------------YI----LLC---GVPPFWAETEE 289
           PE+L     Y   ID+WS G I               YI    L+    G P    E  +
Sbjct: 175 PELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPS--EEDLK 232

Query: 290 GIAHAIIRGKID----FERDPW----PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
            I     R  +       + P     P  S EA +L++ ML  +P  R+T +E L +P++
Sbjct: 233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYL 292

Query: 342 K 342
            
Sbjct: 293 A 293

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score =  122 bits (308), Expect = 3e-31
 Identities = 89/280 (31%), Positives = 157/280 (56%), Gaps = 16/280 (5%)

Query: 66  QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL-KTEID 124
           +LR++VS    G+   KYT  +++G+G  G      ++ TG+  A K+I  +K  K E+ 
Sbjct: 7   KLRTIVS---IGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELI 63

Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
           I+    E+ +M+ L K+PNIV + +++   D +++VME   GG L D +V +    E   
Sbjct: 64  IN----EILVMKEL-KNPNIVNFLDSFLVGDELFVVMEYLAGGSLTD-VVTETCMDEAQI 117

Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCE 243
           AAV +  L+ ++  H N V+HRD+K +N L   G + S +K  DFG      P + +   
Sbjct: 118 AAVCRECLQALEFLHANQVIHRDIKSDNVLL--GMDGS-VKLTDFGFCAQITPEQSKRST 174

Query: 244 IVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF 302
           +VG+PY+MAPEV+ R+ YGP++D+WS G++   ++ G PP+  E      + I       
Sbjct: 175 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPE 234

Query: 303 ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            ++P  K+S   ++ +   L+ +   R + +E+L++P++K
Sbjct: 235 LQNP-EKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score =  121 bits (306), Expect = 3e-31
 Identities = 77/256 (30%), Positives = 120/256 (46%), Gaps = 14/256 (5%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           LG+G FG        E       K++   +L +E +  D   E+ I+  L +HPNI+ Y 
Sbjct: 8   LGKGAFGEATLYRRTEDDSLVVWKEVNLTRL-SEKERRDALNEIVILSLL-QHPNIIAYY 65

Query: 149 EAYEDKDAIYLVMELCEGGELFDRIV--NKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
             + D + + + ME   GG L+D+IV      + E         I+  V   H+ G++HR
Sbjct: 66  NHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHR 125

Query: 207 DLKPEN-FLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYYMAPEVLR-RNYGPE 263
           D+K  N FL   G     +K  DFG+S          E +VG+PYYM+PE+ +   Y  +
Sbjct: 126 DIKTLNIFLTKAGL----IKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFK 181

Query: 264 IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD 323
            D+W+ G ++Y LL     F A     +   I++G        +   S E   LV ++L 
Sbjct: 182 SDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVY---SSELISLVHSLLQ 238

Query: 324 PNPYNRLTLEEVLENP 339
            +P  R T +EVL+ P
Sbjct: 239 QDPEKRPTADEVLDQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score =  122 bits (308), Expect = 3e-31
 Identities = 75/258 (29%), Positives = 130/258 (50%), Gaps = 26/258 (10%)

Query: 104 ETGETYACKKIAK----EKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL 159
           + G+ YA K + K    +K KT    +  R E +++  + + P +VT   A++    ++L
Sbjct: 26  DAGKLYAMKVLKKATIVQKAKTA---EHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHL 82

Query: 160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS 219
           +++   GGELF  +  + H+TE         I+  +   H+ G+++RD+K EN L     
Sbjct: 83  ILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL---D 139

Query: 220 ENSQLKAIDFGLSIFFKPGEQ-----FCEIVGSPYYMAPEVLRR---NYGPEIDVWSAGV 271
               +   DFGLS  F   E+     FC   G+  YMAPEV+R     +   +D WS GV
Sbjct: 140 SEGHVVLTDFGLSKEFLAEEEERAYSFC---GTIEYMAPEVIRGGSGGHDKAVDWWSLGV 196

Query: 272 IIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKELVKNMLDPNPYNRL 330
           + + LL G  PF  + E+     I R +I   + P+PK +S EA++ ++ +L+ +P  RL
Sbjct: 197 LTFELLTGASPFTVDGEQNSQSEISR-RILKSKPPFPKTMSAEARDFIQKLLEKDPKKRL 255

Query: 331 ---TLEEVLENPWIKNDN 345
                +E+  +P+ +  +
Sbjct: 256 GANGADEIKNHPFFQGID 273

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score =  122 bits (308), Expect = 7e-31
 Identities = 83/271 (30%), Positives = 137/271 (50%), Gaps = 28/271 (10%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K LG+G FG         T E YA K + K+ +  + D++    E  ++    KHP +  
Sbjct: 1   KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQ 60

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
               ++ KD ++ VME   GG+L   I   G + E  A      I+  ++  HE G+++R
Sbjct: 61  LHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYR 120

Query: 207 DLKPENFLF-ADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMAPEVLR- 257
           DLK +N L  ++G     +K  DFG+    K G         FC   G+P Y+APE+L  
Sbjct: 121 DLKLDNVLLDSEG----HIKIADFGMC---KEGILGGVTTSTFC---GTPDYIAPEILSY 170

Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
           + YGP +D W+ GV++Y +L G  PF  + E+ +  +I+  ++ + R  W  +SKEAK +
Sbjct: 171 QPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPR--W--LSKEAKSI 226

Query: 318 VKNMLDPNPYNRL-----TLEEVLENPWIKN 343
           +K+ L  NP  RL       +++  +P+ + 
Sbjct: 227 LKSFLTKNPEKRLGCLPTGEQDIKGHPFFRE 257

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score =  122 bits (307), Expect = 1e-30
 Identities = 85/253 (33%), Positives = 134/253 (52%), Gaps = 20/253 (7%)

Query: 87  KELGRGEFGITHQCFEI---ETGETYACKKIAKEKL-KTEIDIDDVRREVEIMRHLPKHP 142
           K LG+G +G   Q  ++   +TG+ +A K + K  + + + D    + E  I+  + KHP
Sbjct: 2   KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV-KHP 60

Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
            IV    A++    +YL++E   GGELF  +  +G + E  A      I   ++  H+ G
Sbjct: 61  FIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQG 120

Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGL---SIFF-KPGEQFCEIVGSPYYMAPEVLRR 258
           +++RDLKPEN L         +K  DFGL   SI        FC   G+  YMAPE+L R
Sbjct: 121 IIYRDLKPENILL---DAQGHVKLTDFGLCKESIHEGTVTHTFC---GTIEYMAPEILMR 174

Query: 259 N-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
           + +G  +D WS G ++Y +L G PPF AE  +     I++GK++      P ++ EA++L
Sbjct: 175 SGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLP----PYLTPEARDL 230

Query: 318 VKNMLDPNPYNRL 330
           +K +L  NP +RL
Sbjct: 231 LKKLLKRNPSSRL 243

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score =  120 bits (302), Expect = 2e-30
 Identities = 86/288 (29%), Positives = 130/288 (45%), Gaps = 45/288 (15%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEIDIDDVRREVEIMRHLP 139
             +   + +G G +G  ++    +TG+  A K +   E  + EI     + E  I+R   
Sbjct: 6   GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEI-----KEEYNILRKYS 60

Query: 140 KHPNIVTYKEAYEDK------DAIYLVMELCEGG---ELFDRIVNKGH-YTERAAAAVGK 189
            HPNI T+  A+  K      D ++LVMELC GG   +L   +  KG    E   A + +
Sbjct: 61  NHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILR 120

Query: 190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FCEIV 245
             LR +   HEN V+HRD+K +N L    ++N+++K +DFG+S            F   +
Sbjct: 121 ETLRGLAYLHENKVIHRDIKGQNILL---TKNAEVKLVDFGVSAQLDSTLGRRNTF---I 174

Query: 246 GSPYYMAPEV------LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK 299
           G+PY+MAPEV         +Y    DVWS G+    L  G PP            I R  
Sbjct: 175 GTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN- 233

Query: 300 IDFERDPWPKV------SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
                 P P +      SK+  + +   L  N   R  +EE+LE+P+I
Sbjct: 234 ------PPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score =  120 bits (302), Expect = 5e-30
 Identities = 81/260 (31%), Positives = 122/260 (46%), Gaps = 25/260 (9%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           +GRG FG      E  TG+ YA K + K  L  +  +     E +I+  +   P I   +
Sbjct: 9   VGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILS-ISNSPWIPQLQ 67

Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHR 206
            A++DKD +YLVME   GG+L   ++N+    + E  A      ++  +   H+ G +HR
Sbjct: 68  YAFQDKDNLYLVMEYQPGGDLLS-LLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHR 126

Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI--VGSPYYMAPEVL-------R 257
           D+KPEN L         +K  DFG +      +       VG+P Y+APEVL       +
Sbjct: 127 DIKPENVLI---DRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGK 183

Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER----DPWPKVSKE 313
             YG E D WS GVI Y ++ G  PF     EG +       ++F+R       PKVS +
Sbjct: 184 GTYGVECDWWSLGVIAYEMIYGRSPF----HEGTSAKTYNNIMNFQRFLKFPEDPKVSSD 239

Query: 314 AKELVKNMLDPNPYNRLTLE 333
             +L++++L      RL  E
Sbjct: 240 FLDLIQSLL-CGQKERLGYE 258

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score =  118 bits (296), Expect = 1e-29
 Identities = 85/264 (32%), Positives = 139/264 (52%), Gaps = 14/264 (5%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD +    ++G G  GI        +G+  A KK+    L+ +   + +  EV IMR   
Sbjct: 22  LDNFI---KIGEGSTGIVCIATVKSSGKLVAVKKM---DLRKQQRRELLFNEVVIMRDY- 74

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +H N+V    +Y   D +++VME  EGG L D IV      E   AAV   +L+ + V H
Sbjct: 75  QHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLKALSVLH 133

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGL-SIFFKPGEQFCEIVGSPYYMAPEVLRR 258
             GV+HRD+K ++ L    + + ++K  DFG  +   K   +   +VG+PY+MAPE++ R
Sbjct: 134 AQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISR 190

Query: 259 -NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
             YGPE+D+WS G+++  ++ G PP++ E     A  +IR  +  +     KVS   K  
Sbjct: 191 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPKLKNLHKVSPSLKGF 249

Query: 318 VKNMLDPNPYNRLTLEEVLENPWI 341
           +  +L  +P  R T  E+L++P++
Sbjct: 250 LDRLLVRDPAQRATAAELLKHPFL 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  118 bits (297), Expect = 1e-29
 Identities = 84/294 (28%), Positives = 130/294 (44%), Gaps = 50/294 (17%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
            ++G G +G  ++    +TGE  A KKI  E  K    I  +R E+++++ L +HPNIV 
Sbjct: 5   AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIR-EIKLLQKL-RHPNIVR 62

Query: 147 YKEAYEDKD--AIYLVMELCE----GGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
            KE    K   +IY+V E  +    G  L D    +  +TE       K +L  ++  H 
Sbjct: 63  LKEIVTSKGKGSIYMVFEYMDHDLTG--LLDS--PEVKFTESQIKCYMKQLLEGLQYLHS 118

Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ--FCEIVGSPYYMAPEVL-- 256
           NG++HRD+K  N L    + +  LK  DFGL+  +       +   V + +Y  PE+L  
Sbjct: 119 NGILHRDIKGSNILI---NNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLG 175

Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR--GKIDFERDPWPKVSK-- 312
              YGPE+D+WS G I+  L  G P F   TE      I    G    E   WP VSK  
Sbjct: 176 ATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDEN--WPGVSKLP 233

Query: 313 -------------------------EAKELVKNMLDPNPYNRLTLEEVLENPWI 341
                                     A +L+  +L  +P  R++ ++ L++ + 
Sbjct: 234 WFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score =  118 bits (298), Expect = 1e-29
 Identities = 81/247 (32%), Positives = 125/247 (50%), Gaps = 11/247 (4%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K LG+G FG      E  TG  YA K + KE +  + ++     E  ++++  +HP +  
Sbjct: 1   KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 59

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH-ENGVMH 205
            K +++  D +  VME   GGELF  +  +  ++E  A   G  I+  +   H E  V++
Sbjct: 60  LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 119

Query: 206 RDLKPENFLFADGSENSQLKAIDFGL-SIFFKPGEQFCEIVGSPYYMAPEVLRRN-YGPE 263
           RDLK EN +     ++  +K  DFGL     K G       G+P Y+APEVL  N YG  
Sbjct: 120 RDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRA 176

Query: 264 IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD 323
           +D W  GV++Y ++CG  PF+ +  E +   I+  +I F R     +S EAK L+  +L 
Sbjct: 177 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLSPEAKSLLSGLLK 232

Query: 324 PNPYNRL 330
            +P  RL
Sbjct: 233 KDPKQRL 239

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score =  117 bits (295), Expect = 2e-29
 Identities = 91/281 (32%), Positives = 142/281 (50%), Gaps = 16/281 (5%)

Query: 64  SFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEI 123
           + QL     +P E   LD +    ++G G  GI     E  TG+  A KK+    L+ + 
Sbjct: 10  ALQLVVSPGDPREY--LDSFI---KIGEGSTGIVCIATEKHTGKQVAVKKM---DLRKQQ 61

Query: 124 DIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA 183
             + +  EV IMR    H N+V    +Y   D +++VME  EGG L D IV      E  
Sbjct: 62  RRELLFNEVVIMRDY-HHENVVDMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQ 119

Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL-SIFFKPGEQFC 242
            A V  ++LR +   H  GV+HRD+K ++ L    + + ++K  DFG  +   K   +  
Sbjct: 120 IATVCLSVLRALSYLHNQGVIHRDIKSDSILL---TSDGRIKLSDFGFCAQVSKEVPKRK 176

Query: 243 EIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
            +VG+PY+MAPEV+ R  YG E+D+WS G+++  ++ G PP++ E     A   IR  + 
Sbjct: 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ-AMRRIRDNLP 235

Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
                  KVS   +  +  ML   P  R T +E+L++P++K
Sbjct: 236 PRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLK 276

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score =  116 bits (293), Expect = 2e-29
 Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 27/263 (10%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           LG G +G  ++    ETG+  A K +       E D+ ++ +E+ I++     P IV Y 
Sbjct: 11  LGEGSYGSVYKAIHKETGQVVAIKVV-----PVEEDLQEIIKEISILKQC-DSPYIVKYY 64

Query: 149 EAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
            +Y     +++VME C  G + D  +I NK   TE   AA+    L+ ++  H N  +HR
Sbjct: 65  GSYFKNTDLWIVMEYCGAGSVSDIMKITNK-TLTEEEIAAILYQTLKGLEYLHSNKKIHR 123

Query: 207 DLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEI 264
           D+K  N L    +E  Q K  DFG+S        +   ++G+P++MAPEV++   Y  + 
Sbjct: 124 DIKAGNILL---NEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKA 180

Query: 265 DVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP------KVSKEAKELV 318
           D+WS G+    +  G PP+         H  +R        P P      K S E  + V
Sbjct: 181 DIWSLGITAIEMAEGKPPY------SDIHP-MRAIFMIPNKPPPTLSDPEKWSPEFNDFV 233

Query: 319 KNMLDPNPYNRLTLEEVLENPWI 341
           K  L  +P  R +  ++L++P+I
Sbjct: 234 KKCLVKDPEERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score =  116 bits (293), Expect = 3e-29
 Identities = 86/265 (32%), Positives = 128/265 (48%), Gaps = 12/265 (4%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           LG+G FG    C    TG+ YACK++ K+++K          E +I+  +     +V   
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQ-FVVNLA 66

Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTILRIVKVCHENGVMHR 206
            AYE KDA+ LV+ +  GG+L   I N G+  + E  A      IL  ++  H    ++R
Sbjct: 67  YAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYR 126

Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEID 265
           DLKPEN L  D      ++  D GL++    GE     VG+  YMAPEVL  + Y    D
Sbjct: 127 DLKPENILLDD---YGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPD 183

Query: 266 VWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPN 325
            W  G +IY ++ G  PF    E+     + R  ++ E     K S+EAK + K +L  +
Sbjct: 184 YWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKD 243

Query: 326 PYNRLTLE-----EVLENPWIKNDN 345
           P  RL  +     EV  +P+ +N N
Sbjct: 244 PKQRLGCQEEGAGEVKRHPFFRNMN 268

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score =  115 bits (289), Expect = 7e-29
 Identities = 80/276 (28%), Positives = 138/276 (50%), Gaps = 32/276 (11%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
            + Y   + +G G +G  ++  +I TGE  A K I   KL+   D + +++E+ +++   
Sbjct: 2   QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVI---KLEPGDDFEIIQQEISMLKEC- 57

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVC 198
           +HPNIV Y  +Y  +D +++VME C GG L D   V +G  +E   A V +  L+ +   
Sbjct: 58  RHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYL 117

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLS--IF--FKPGEQFCEIVGSPYYMAPE 254
           HE G +HRD+K  N L    +E+  +K  DFG+S  +       + F   +G+PY+MAPE
Sbjct: 118 HETGKIHRDIKGANILL---TEDGDVKLADFGVSAQLTATIAKRKSF---IGTPYWMAPE 171

Query: 255 VL----RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAI-IRGKIDF------E 303
           V     +  Y  + D+W+ G+    L    PP +   +     A+ +  K +F      +
Sbjct: 172 VAAVERKGGYDGKCDIWALGITAIELAELQPPMF---DLHPMRALFLISKSNFPPPKLKD 228

Query: 304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENP 339
           ++ W   S    + +K  L  +P  R T  ++L++P
Sbjct: 229 KEKW---SPVFHDFIKKCLTKDPKKRPTATKLLQHP 261

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score =  117 bits (293), Expect = 8e-29
 Identities = 79/252 (31%), Positives = 128/252 (50%), Gaps = 22/252 (8%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K LG+G FG      E  +G+ YA K + KE +  + ++     E  ++++  +HP + +
Sbjct: 1   KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKN-TRHPFLTS 59

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
            K +++ KD +  VME   GGELF  +  +  ++E      G  I+  +   H   +++R
Sbjct: 60  LKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYR 119

Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMAPEVLRRN 259
           DLK EN +     ++  +K  DFGL    K G       + FC   G+P Y+APEVL  N
Sbjct: 120 DLKLENLML---DKDGHIKITDFGLC---KEGITDAATMKTFC---GTPEYLAPEVLEDN 170

Query: 260 -YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            YG  +D W  GV++Y ++CG  PF+ +  E +   I+   I F R     +S +AK L+
Sbjct: 171 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPR----TLSADAKSLL 226

Query: 319 KNMLDPNPYNRL 330
             +L  +P  RL
Sbjct: 227 SGLLIKDPNKRL 238

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score =  117 bits (294), Expect = 1e-28
 Identities = 82/274 (29%), Positives = 131/274 (47%), Gaps = 14/274 (5%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
            + +   K +GRG FG         + + YA K ++K ++    D      E +IM H  
Sbjct: 42  AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAH-A 100

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
               IV    A++D   +Y+VME   GG+L + + N     + A     + +L +  + H
Sbjct: 101 NSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAI-H 159

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-KPGEQFCEI-VGSPYYMAPEVLR 257
             G +HRD+KP+N L     ++  LK  DFG  +     G   C+  VG+P Y++PEVL+
Sbjct: 160 SMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLK 216

Query: 258 RN-----YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK 312
                  YG E D WS GV +Y +L G  PF+A++  G    I+  K         ++SK
Sbjct: 217 SQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISK 276

Query: 313 EAKELVKNMLDPNPY--NRLTLEEVLENPWIKND 344
           +AK+L+   L        R  ++E+  +P+ KND
Sbjct: 277 QAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  114 bits (287), Expect = 1e-28
 Identities = 70/272 (25%), Positives = 114/272 (41%), Gaps = 36/272 (13%)

Query: 84  TFGKELGRGEFGITHQCF----EIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           T GK+LG G FG  ++        +     A K + ++   +E  I++  RE  IMR L 
Sbjct: 2   TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDA--SEQQIEEFLREARIMRKL- 58

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC- 198
            HPN+V       +++ +Y+VME  EGG+L   +                ++  ++    
Sbjct: 59  DHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKL---------SLSDLLSFAL 109

Query: 199 ---------HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVG-SP 248
                         +HRDL   N L     EN  +K  DFGLS      + + +  G  P
Sbjct: 110 QIARGMEYLESKNFIHRDLAARNCLV---GENLVVKISDFGLSRDLYDDDYYRKRGGKLP 166

Query: 249 Y-YMAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERD 305
             +MAPE L+   +  + DVWS GV+++ I   G  P+   + E +   +  G       
Sbjct: 167 IRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYR---LP 223

Query: 306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
             P    E  +L+      +P +R T  E++E
Sbjct: 224 QPPNCPPELYDLMLQCWAEDPEDRPTFSELVE 255

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score =  115 bits (290), Expect = 1e-28
 Identities = 81/266 (30%), Positives = 131/266 (49%), Gaps = 32/266 (12%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K +  G +G  +     ET + +A KKI K+ L     I  V  E +I+    ++P +V+
Sbjct: 7   KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILT-FAENPFVVS 65

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY-TERAAAAVGKTILRIVKVCHENGVMH 205
              ++E K  + +VME  EGG+    + N G    + A     +T+L + +  H  G++H
Sbjct: 66  MFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLAL-EYLHNYGIVH 124

Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFF--------------KPGEQFC--EIVGSPY 249
           RDLKP+N L    +    +K  DFGLS                 K   +F   ++ G+P 
Sbjct: 125 RDLKPDNLLI---TSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPE 181

Query: 250 YMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP 308
           Y+APEV LR+ YG  +D W+ G+I+Y  L G  PF+ +T E +   +I   I+     WP
Sbjct: 182 YIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE-----WP 236

Query: 309 K----VSKEAKELVKNMLDPNPYNRL 330
           +    +  +A++L+  +L  NP  RL
Sbjct: 237 EGDEALPADAQDLISRLLRQNPLERL 262

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score =  114 bits (288), Expect = 1e-28
 Identities = 81/277 (29%), Positives = 133/277 (48%), Gaps = 42/277 (15%)

Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           ELG G FG  ++    ETG   A K I   ++++E +++D   E++I+    KHPNIV  
Sbjct: 12  ELGDGAFGKVYKAQHKETGLFAAAKII---QIESEEELEDFMVEIDILSEC-KHPNIVGL 67

Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHENGVMHR 206
            EAY  ++ +++++E C+GG L   ++      TE     V + +L  +   H + V+HR
Sbjct: 68  YEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHR 127

Query: 207 DLKPENFLFA-DGSENSQLKAIDFGLSIFFKPGEQ----FCEIVGSPYYMAPEVL----- 256
           DLK  N L   DG     +K  DFG+S   K   Q    F   +G+PY+MAPEV+     
Sbjct: 128 DLKAGNILLTLDG----DVKLADFGVSAKNKSTLQKRDTF---IGTPYWMAPEVVACETF 180

Query: 257 -RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHA---IIRGKIDFERDPWPKV-- 310
               Y  + D+WS G+ +  L    PP          H     +R  +   +   P +  
Sbjct: 181 KDNPYDYKADIWSLGITLIELAQMEPP----------HHELNPMRVLLKILKSEPPTLDQ 230

Query: 311 ----SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
               S    + +K+ L  +P +R T  E+L++P++ +
Sbjct: 231 PSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSD 267

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score =  115 bits (290), Expect = 2e-28
 Identities = 77/247 (31%), Positives = 122/247 (49%), Gaps = 15/247 (6%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           LG+G FG        E+G  YA K + K+ +  + D++    E  I+     HP +    
Sbjct: 3   LGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLY 62

Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDL 208
             ++  D ++ VME   GG+L   I     + E  A      I   +   H+ G+++RDL
Sbjct: 63  CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDL 122

Query: 209 KPENFLFADGSENSQLKAIDFGL---SIF-FKPGEQFCEIVGSPYYMAPEVLRRN-YGPE 263
           K +N L          K  DFG+    IF  K    FC   G+P Y+APE+L+   YGP 
Sbjct: 123 KLDNVLL---DHEGHCKLADFGMCKEGIFNGKTTSTFC---GTPDYIAPEILQEMLYGPS 176

Query: 264 IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD 323
           +D W+ GV++Y +LCG  PF AE E+ +  AI+  ++ +    W  +S++A +++K  + 
Sbjct: 177 VDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP--TW--LSQDAVDILKAFMT 232

Query: 324 PNPYNRL 330
            NP  RL
Sbjct: 233 KNPTMRL 239

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score =  114 bits (286), Expect = 3e-28
 Identities = 86/293 (29%), Positives = 142/293 (48%), Gaps = 41/293 (13%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVR-REVEIMRH 137
           +KY    ++G G +G+  +C   ETG+  A KK     +++E D  I  +  RE+ +++ 
Sbjct: 1   EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKF----VESEDDPVIKKIALREIRMLKQ 56

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
           L KHPN+V   E +  K  ++LV E C+   L +   N     E     +    L+ V  
Sbjct: 57  L-KHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNF 115

Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVL 256
           CH++  +HRD+KPEN L    ++  Q+K  DFG + I   PG+ + + V + +Y APE+L
Sbjct: 116 CHKHNCIHRDVKPENILI---TKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELL 172

Query: 257 --RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR--GKIDF---------- 302
                YGP +DVW+ G +   LL G P +  +++    + I +  G +            
Sbjct: 173 VGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQ 232

Query: 303 -----------ERDP----WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
                       R+P    +P +S  A   +K  L  +P  RL+ EE+LE+P+
Sbjct: 233 FFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPY 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score =  114 bits (288), Expect = 3e-28
 Identities = 80/253 (31%), Positives = 125/253 (49%), Gaps = 23/253 (9%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K LG+G FG         T E YA K + K+ +  + D+D    E  I+    KHP +  
Sbjct: 1   KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTA 60

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
               ++ KD ++ VME   GG+L  +I     + E  +      +   +   H +GV++R
Sbjct: 61  LHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYR 120

Query: 207 DLKPENFLF-ADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMAPEVLRR 258
           DLK +N L  A+G      K  DFG+    K G         FC   G+P Y+APE+L+ 
Sbjct: 121 DLKLDNILLDAEG----HCKLADFGMC---KEGILNGVTTTTFC---GTPDYIAPEILQE 170

Query: 259 -NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
             YGP +D W+ GV++Y ++ G PPF A+ E+ +  +I+   + +    W  +SKEA  +
Sbjct: 171 LEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYP--VW--LSKEAVSI 226

Query: 318 VKNMLDPNPYNRL 330
           +K  +  NP  RL
Sbjct: 227 LKAFMTKNPNKRL 239

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score =  113 bits (284), Expect = 5e-28
 Identities = 86/265 (32%), Positives = 134/265 (50%), Gaps = 12/265 (4%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           LG+G FG    C    TG+ YACKK+ K++LK          E +I+  +     IV+  
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKV-SSRFIVSLA 59

Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTILRIVKVCHENGVMHR 206
            A+E KD + LVM L  GG+L   I N G   + E  A      I+  ++  H+  +++R
Sbjct: 60  YAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYR 119

Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRN-YGPEID 265
           DLKPEN L  D   +  ++  D GL++  K G++     G+P YMAPEVL+   Y   +D
Sbjct: 120 DLKPENVLLDD---HGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVD 176

Query: 266 VWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPN 325
            ++ G  +Y ++ G  PF    E+     + R  ++   +   K S EAK+L + +L  +
Sbjct: 177 WFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKD 236

Query: 326 PYNRL-----TLEEVLENPWIKNDN 345
           P  RL     + +EV E+P  K+ N
Sbjct: 237 PEKRLGCRGGSADEVREHPLFKDLN 261

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score =  115 bits (289), Expect = 5e-28
 Identities = 88/301 (29%), Positives = 137/301 (45%), Gaps = 52/301 (17%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K +GRG FG      + +TG  YA KK+ K ++  +  +  VR E +I+     +P +V 
Sbjct: 7   KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAE-ADNPWVVK 65

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAA-AVGKTILRIVKVCHENGVMH 205
              +++D++ +YL+ME   GG++   ++ K  +TE      + +TIL I  + H+ G +H
Sbjct: 66  LYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSI-HKLGYIH 124

Query: 206 RDLKPENFLF-ADGSENSQLKAIDFGLSIFFK---------------PGEQFCEI----- 244
           RD+KP+N L  A G     +K  DFGL    K               P      I     
Sbjct: 125 RDIKPDNLLLDAKG----HIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMS 180

Query: 245 -------------------VGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFW 284
                              VG+P Y+APEV  +  Y  E D WS GVI+Y +L G PPF 
Sbjct: 181 SKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFC 240

Query: 285 AETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRL---TLEEVLENPWI 341
           ++  +     II  K   +      +S EAK+L+K +       RL    + E+  +P+ 
Sbjct: 241 SDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLC-CEAERRLGNNGVNEIKSHPFF 299

Query: 342 K 342
           K
Sbjct: 300 K 300

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score =  113 bits (285), Expect = 6e-28
 Identities = 85/287 (29%), Positives = 133/287 (46%), Gaps = 40/287 (13%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           +G G +GI ++  +  +GE  A KK+  +  +  I I  +R E+ ++ +L +HPNIV  K
Sbjct: 15  IGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLR-EITLLLNL-RHPNIVELK 72

Query: 149 EAYEDK--DAIYLVMELCEG--GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
           E    K  D+I+LVME CE     L D +     ++E     +   +LR ++  HEN ++
Sbjct: 73  EVVVGKHLDSIFLVMEYCEQDLASLLDNMPTP--FSESQVKCLMLQLLRGLQYLHENFII 130

Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVL--RRNYG 261
           HRDLK  N L  D      LK  DFGL+  +  P +     V + +Y APE+L     Y 
Sbjct: 131 HRDLKVSNLLLTDKGC---LKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYT 187

Query: 262 PEIDVWSAGVIIYILLCGVPPFWAETE-------------------EGIAHAIIRGKIDF 302
             ID+W+ G I+  LL   P    ++E                    G +   + GK   
Sbjct: 188 TAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTL 247

Query: 303 ERDPW-------PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            + P+       P +S+    L+  +L  +P  R T EE LE+ + K
Sbjct: 248 PKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFK 294

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score =  112 bits (281), Expect = 7e-28
 Identities = 71/261 (27%), Positives = 123/261 (47%), Gaps = 10/261 (3%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           KY   + +GRG FGI H C      +    K+I  E++ T+ +    + E ++++ L  H
Sbjct: 1   KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLL-SH 58

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTILRIVKVCH 199
           PNI+ Y E + +  A+ +VME   GG L + I  + +    E         IL  +   H
Sbjct: 59  PNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVH 118

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              ++HRDLK +N L         +K  DFG+S       +   +VG+P Y++PE+   +
Sbjct: 119 TKLILHRDLKTQNILL--DKHKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGK 176

Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y  + D+W+ G ++Y L      F A     +   I+ G      D   + S + ++L+
Sbjct: 177 PYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISD---RYSPDLRQLI 233

Query: 319 KNMLDPNPYNRLTLEEVLENP 339
            +ML+ +P  R  L +++  P
Sbjct: 234 LSMLNLDPSKRPQLSQIMAQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score =  111 bits (280), Expect = 8e-28
 Identities = 79/271 (29%), Positives = 133/271 (49%), Gaps = 27/271 (9%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKI------AKEKLKTEIDIDDVRREVEIMR 136
           Y F + +G+G +G          G+ Y  KK+       +E+   E       +E +++ 
Sbjct: 2   YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAE-------QEAQLLS 54

Query: 137 HLPKHPNIVTYKEAYEDKDA-IYLVMELCEGGELFDRIV-NKGH-YTERAAAAVGKTILR 193
            L KHPNIV Y+E++E +D  +Y+VM  CEGG+L+ ++   KG    E         I  
Sbjct: 55  QL-KHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAM 113

Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMA 252
            ++  HE  ++HRDLK +N      +  + +K  D G++ +     +    ++G+PYYM+
Sbjct: 114 ALQYLHEKHILHRDLKTQNVFL---TRTNIIKVGDLGIARVLENQCDMASTLIGTPYYMS 170

Query: 253 PEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-V 310
           PE+   + Y  + DVW+ G  +Y +      F A+    + + II GK+     P PK  
Sbjct: 171 PELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL----PPMPKDY 226

Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           S E  EL+  ML   P  R +++ +L  P+I
Sbjct: 227 SPELGELIATMLSKRPEKRPSVKSILRQPYI 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score =  112 bits (282), Expect = 2e-27
 Identities = 77/254 (30%), Positives = 123/254 (48%), Gaps = 17/254 (6%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           + F   LG+G FG         T E YA K + K+ +  + D++    E  ++    K P
Sbjct: 2   FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPP 61

Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
            +      ++  D +Y VME   GG+L   I   G + E  A      I   +   H  G
Sbjct: 62  FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKG 121

Query: 203 VMHRDLKPENFLF-ADGSENSQLKAIDFGL---SIFFKPGEQFCEIVGSPYYMAPE-VLR 257
           +++RDLK +N +  A+G     +K  DFG+   +IF   G+      G+P Y+APE +  
Sbjct: 122 IIYRDLKLDNVMLDAEG----HIKIADFGMCKENIF--GGKTTRTFCGTPDYIAPEIIAY 175

Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKE 316
           + YG  +D W+ GV++Y +L G PPF  E E+ +  +I+   + +     PK +SKEA  
Sbjct: 176 QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSY-----PKSLSKEAVS 230

Query: 317 LVKNMLDPNPYNRL 330
           + K +L  +P  RL
Sbjct: 231 ICKGLLTKHPAKRL 244

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score =  111 bits (280), Expect = 2e-27
 Identities = 80/294 (27%), Positives = 133/294 (45%), Gaps = 49/294 (16%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR--REVEIMRHLPK 140
           Y    ++G G F    +    +TG+ YA K + K+  K    ++ V   RE++ +R L  
Sbjct: 1   YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCM-KKHFK---SLEQVNNLREIQALRRLSP 56

Query: 141 HPNIVTYKEAYEDKDA--IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK-- 196
           HPNI+   E   D+    + LV EL +   L++ I  +          V   + +++K  
Sbjct: 57  HPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPL--PEKRVKSYMYQLLKSL 113

Query: 197 -VCHENGVMHRDLKPENFLFADGSENSQLKAIDFG--LSIFFKPGEQFCEIVGSPYYMAP 253
              H NG+ HRD+KPEN L  D      LK  DFG    I+ KP   + E + + +Y AP
Sbjct: 114 DHMHRNGIFHRDIKPENILIKDDI----LKLADFGSCRGIYSKP--PYTEYISTRWYRAP 167

Query: 254 EVLRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIA--HAII---RGKIDFERD 305
           E L  +  YGP++D+W+ G + + +L   P F    E + IA  H ++     ++  +  
Sbjct: 168 ECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFR 227

Query: 306 PW-------------------PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
                                P  S E  +L+K +L  +P  R+T ++ L +P+
Sbjct: 228 KSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPY 281

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score =  111 bits (279), Expect = 3e-27
 Identities = 83/284 (29%), Positives = 148/284 (52%), Gaps = 28/284 (9%)

Query: 67  LRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDID 126
           LR VV      ++L+ Y    ++G G  GI     E  +G   A K +    L+ +   +
Sbjct: 10  LRMVVDQGDPRSLLENYI---KIGEGSTGIVCIAREKHSGRQVAVKMM---DLRKQQRRE 63

Query: 127 DVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
            +  EV IMR   +H N+V   ++Y   + ++++ME  +GG L D IV++    E   A 
Sbjct: 64  LLFNEVVIMRDY-QHQNVVEMYKSYLVGEELWVLMEFLQGGALTD-IVSQTRLNEEQIAT 121

Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFA-DGSENSQLKAIDFGL-SIFFKPGEQFCEI 244
           V +++L+ +   H  GV+HRD+K ++ L   DG    ++K  DFG  +   K   +   +
Sbjct: 122 VCESVLQALCYLHSQGVIHRDIKSDSILLTLDG----RVKLSDFGFCAQISKDVPKRKSL 177

Query: 245 VGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE 303
           VG+PY+MAPEV+ R  YG E+D+WS G+++  ++ G PP+++++        ++      
Sbjct: 178 VGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP-------VQAMKRLR 230

Query: 304 RDPWP------KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
             P P      K+S   ++ ++ ML   P  R T +E+L++P++
Sbjct: 231 DSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFL 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score =  111 bits (279), Expect = 3e-27
 Identities = 91/305 (29%), Positives = 131/305 (42%), Gaps = 51/305 (16%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           +DK+    ++G G +G  ++  + +TGE  A KK+  +  K    I  +R E++I+R L 
Sbjct: 6   VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIR-EIKILRQL- 63

Query: 140 KHPNIVTYKEAYEDKD----------AIYLVMELCEG---GELFDRIVNKGHYTERAAAA 186
            H NIV  KE   DK           A YLV E  +    G L   +V   H++E    +
Sbjct: 64  NHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLV---HFSEDHIKS 120

Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ--FCEI 244
             K +L  +  CH+   +HRD+K  N L    +   Q+K  DFGL+  +   E   +   
Sbjct: 121 FMKQLLEGLNYCHKKNFLHRDIKCSNILL---NNKGQIKLADFGLARLYNSEESRPYTNK 177

Query: 245 VGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF 302
           V + +Y  PE+L     YGP IDVWS G I+  L    P F A  E      I R     
Sbjct: 178 VITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSP 237

Query: 303 ERDPWPKVSK--------------------------EAKELVKNMLDPNPYNRLTLEEVL 336
               WP V K                           A +L+ +ML  +P  R T EE L
Sbjct: 238 CPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEAL 297

Query: 337 ENPWI 341
            +PW+
Sbjct: 298 NSPWL 302

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score =  110 bits (277), Expect = 3e-27
 Identities = 73/268 (27%), Positives = 133/268 (49%), Gaps = 21/268 (7%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETY-ACKKI-------AKEKLKTEIDIDDVRREVEI 134
           Y   + LG G FG  ++  +   G+   A K+I        K+K + +  I D+  EV I
Sbjct: 2   YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTI 61

Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG---GELFDRIVNKG-HYTERAAAAVGKT 190
           ++   +HPNIV Y + + + D +Y+VM+L EG   GE F+ +  K   +TE     +   
Sbjct: 62  IKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQ 121

Query: 191 ILRIVKVCH-ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
           ++  ++  H E  ++HRDL P N +     E+ ++   DFGL+   +P  +   +VG+  
Sbjct: 122 MVLALRYLHKEKRIVHRDLTPNNIML---GEDDKVTITDFGLAKQKQPESKLTSVVGTIL 178

Query: 250 YMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID-FERDPW 307
           Y  PE+++   YG + DVW+ G I+Y +    PPF++     +A  I+    +      +
Sbjct: 179 YSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMY 238

Query: 308 PKVSKEAKELVKNMLDPNPYNRLTLEEV 335
              S++  +++ + L P+   R  + +V
Sbjct: 239 ---SEDVTDVITSCLTPDAEARPDIIQV 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score =  111 bits (278), Expect = 4e-27
 Identities = 77/277 (27%), Positives = 140/277 (50%), Gaps = 25/277 (9%)

Query: 87  KELGRGEFGITHQCFEI---ETGETYACKKIAK----EKLKTEIDIDDVRREVEIMRHLP 139
           K LG G +G      ++   ++G+ YA K + K    +K KT    +  R E +++ H+ 
Sbjct: 6   KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTT---EHTRTERQVLEHIR 62

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           + P +VT   A++    ++L+++   GGELF  +  +  + E+        I+  ++  H
Sbjct: 63  QSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLH 122

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF--KPGEQFCEIVGSPYYMAPEVLR 257
           + G+++RD+K EN L      N  +   DFGLS  F     E+     G+  YMAP+++R
Sbjct: 123 KLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVR 179

Query: 258 ---RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKE 313
                +   +D WS GV++Y LL G  PF  + E+  + A I  +I     P+P+ +S  
Sbjct: 180 GGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN-SQAEISRRILKSEPPYPQEMSAL 238

Query: 314 AKELVKNMLDPNPYNRL-----TLEEVLENPWIKNDN 345
           AK++++ +L  +P  RL       +E+ ++P+ +  N
Sbjct: 239 AKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score =  110 bits (276), Expect = 4e-27
 Identities = 74/269 (27%), Positives = 135/269 (50%), Gaps = 20/269 (7%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L  +   K++G+G+F + ++   +  G   A KK+   ++       D  +E+++++ L 
Sbjct: 1   LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL- 59

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILR-IVKVC 198
            HPN++ Y  ++ + + + +V+EL + G+L   I    H+ ++      +TI +  V++C
Sbjct: 60  DHPNVIKYLASFIENNELNIVLELADAGDLSRMI---KHFKKQKRLIPERTIWKYFVQLC 116

Query: 199 ------HENGVMHRDLKPEN-FLFADGSENSQLKAIDFGLSIFF--KPGEQFCEIVGSPY 249
                 H   +MHRD+KP N F+ A G     +K  D GL  FF  K       +VG+PY
Sbjct: 117 SALEHMHSKRIMHRDIKPANVFITATGV----VKLGDLGLGRFFSSKTTAAH-SLVGTPY 171

Query: 250 YMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP 308
           YM+PE +  N Y  + D+WS G ++Y +     PF+ +     +      K D+   P  
Sbjct: 172 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPAD 231

Query: 309 KVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
             S+E ++LV   ++P+P  R  +  VL+
Sbjct: 232 HYSEELRDLVSRCINPDPEKRPDISYVLQ 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  109 bits (276), Expect = 5e-27
 Identities = 71/269 (26%), Positives = 115/269 (42%), Gaps = 29/269 (10%)

Query: 84  TFGKELGRGEFGITHQCF----EIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           T GK+LG G FG  ++              A K + ++   +E  I++  RE  IMR L 
Sbjct: 2   TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDA--SEQQIEEFLREARIMRKL- 58

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC- 198
            HPNIV       +++ + +VME   GG+L D +            ++   +   +++  
Sbjct: 59  DHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYL----RKNRPKELSLSDLLSFALQIAR 114

Query: 199 -----HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVG-SPY-YM 251
                     +HRDL   N L     EN  +K  DFGLS      + +    G  P  +M
Sbjct: 115 GMEYLESKNFIHRDLAARNCLV---GENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWM 171

Query: 252 APEVLRRN-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
           APE L+   +  + DVWS GV+++ I   G  P+   +   +   + +G     R P P 
Sbjct: 172 APESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKG----YRLPKPP 227

Query: 310 V-SKEAKELVKNMLDPNPYNRLTLEEVLE 337
               E  +L+      +P +R T  E++E
Sbjct: 228 NCPPELYKLMLQCWAEDPEDRPTFSELVE 256

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score =  111 bits (279), Expect = 6e-27
 Identities = 75/275 (27%), Positives = 134/275 (48%), Gaps = 22/275 (8%)

Query: 87  KELGRGEFGITHQCFEI---ETGETYACKKIAKEKL-KTEIDIDDVRREVEIMRHLPKHP 142
           K LG G +G      ++   +TG+ YA K + K  L +    ++  R E  ++ H+ + P
Sbjct: 6   KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSP 65

Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
            +VT   A++ +  ++L+++   GGE+F  +  + +++E         I+  ++  H+ G
Sbjct: 66  FLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLG 125

Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ-----FCEIVGSPYYMAPEVLR 257
           +++RD+K EN L         +   DFGLS  F   E+     FC   G+  YMAPE++R
Sbjct: 126 IVYRDIKLENILL---DSEGHVVLTDFGLSKEFLSEEKERTYSFC---GTIEYMAPEIIR 179

Query: 258 --RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
               +G  +D WS G++I+ LL G  PF  E E      + R  +  +      +  EA+
Sbjct: 180 GKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQ 239

Query: 316 ELVKNMLDPNPYNRL-----TLEEVLENPWIKNDN 345
           +L+  +L  +P  RL        E+ E+P+ K  +
Sbjct: 240 DLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLD 274

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score =  110 bits (277), Expect = 1e-26
 Identities = 87/297 (29%), Positives = 135/297 (45%), Gaps = 45/297 (15%)

Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
           I ++Y   + +G G FG+     +  TG+  A KKI K    T +      RE+++++HL
Sbjct: 8   ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMK-PFSTPVLAKRTYRELKLLKHL 66

Query: 139 PKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
            +H NI++  + +    ED   IY V EL   G    R++      ++        ILR 
Sbjct: 67  -RHENIISLSDIFISPLED---IYFVTELL--GTDLHRLLTSRPLEKQFIQYFLYQILRG 120

Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H  GV+HRDLKP N L    +EN  LK  DFGL+    P  Q    V + YY APE
Sbjct: 121 LKYVHSAGVVHRDLKPSNILI---NENCDLKICDFGLARIQDP--QMTGYVSTRYYRAPE 175

Query: 255 VLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAE----------------TEEGIAHAII 296
           ++   + Y  E+D+WSAG I   +L G P F  +                 ++ I     
Sbjct: 176 IMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICS 235

Query: 297 RGKIDF-----ERDPWP------KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
              + F     +R+P P           A +L++ ML  +P  R++  E L +P++ 
Sbjct: 236 ENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLA 292

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score =  108 bits (272), Expect = 2e-26
 Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 33/272 (12%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKI---AKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
            ELG G  G+  +     TG+  A K I     E ++ +I      RE++I+      P 
Sbjct: 7   GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQI-----LRELDILHKC-NSPY 60

Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRI--VNKGHYTERAAAAVGKTILRIVKVCHEN 201
           IV +  A+ +   I + ME  +GG L D+I    +G   ER    +   +L+ +   HE 
Sbjct: 61  IVGFYGAFYNNGDISICMEYMDGGSL-DKILKEVQGRIPERILGKIAVAVLKGLTYLHEK 119

Query: 202 -GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI----VGSPYYMAPEVL 256
             ++HRD+KP N L    +   Q+K  DFG+S     G+    +    VG+  YMAPE +
Sbjct: 120 HKIIHRDVKPSNILV---NSRGQIKLCDFGVS-----GQLVNSLAKTFVGTSSYMAPERI 171

Query: 257 RRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIA-----HAIIRGKIDFERDPWPKV 310
           + N Y  + D+WS G+ +  L  G  P+  E +           I+       R P  K 
Sbjct: 172 QGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE--PPPRLPSGKF 229

Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           S + ++ V   L  +P  R + +E+LE+P+IK
Sbjct: 230 SPDFQDFVNLCLIKDPRERPSYKELLEHPFIK 261

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score =  109 bits (273), Expect = 2e-26
 Identities = 85/272 (31%), Positives = 130/272 (47%), Gaps = 26/272 (9%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM-----RHLPK--H 141
           LG+G FG    C    TG+ YACKK+ K+++K        +R+ E M     + L K   
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIK--------KRKGEAMALNEKQILEKVNS 59

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTILRIVKVCH 199
             +V+   AYE KDA+ LV+ L  GG+L   I N G+  + E  A      I   ++  H
Sbjct: 60  RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLH 119

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              +++RDLKPEN L  D      ++  D GL++    GE     VG+  YMAPEV++  
Sbjct: 120 RERIVYRDLKPENILLDD---YGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNE 176

Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y    D W  G +IY ++ G  PF    E+     + R   + + +   K S+ A+ + 
Sbjct: 177 RYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSIC 236

Query: 319 KNMLDPNPYNRL-----TLEEVLENPWIKNDN 345
           + +L  +P  RL       EEV  +P+ +  N
Sbjct: 237 RQLLTKDPGFRLGCRGEGAEEVKAHPFFRTAN 268

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score =  108 bits (273), Expect = 3e-26
 Identities = 77/294 (26%), Positives = 131/294 (44%), Gaps = 43/294 (14%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K LG+G+ G         TG+ +A K + K+++     +  V  E EI+  L  HP + T
Sbjct: 7   KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL-DHPFLPT 65

Query: 147 YKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
              +++ +  + LVM+ C GGELF   +       +E  A      +L  ++  H  G++
Sbjct: 66  LYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIV 125

Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG----------------------EQFC 242
           +RDLKPEN L     E+  +   DF LS                            E F 
Sbjct: 126 YRDLKPENILL---HESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFS 182

Query: 243 EI--------VGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAH 293
           E         VG+  Y+APEV+  + +G  +D W+ G+++Y +L G  PF     +    
Sbjct: 183 EEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFS 242

Query: 294 AIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRL----TLEEVLENPWIKN 343
            I++ ++ F     P VS  A++L++ +L  +P  RL       E+ ++P+ + 
Sbjct: 243 NILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRG 294

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score =  108 bits (273), Expect = 5e-26
 Identities = 94/299 (31%), Positives = 135/299 (45%), Gaps = 49/299 (16%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           KY   K +GRG +GI       ET E  A KKIA       ID     RE++++RHL  H
Sbjct: 6   KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIAN-AFDNRIDAKRTLREIKLLRHL-DH 63

Query: 142 PNIVTYK--------EAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILR 193
            N++  K        EA+ D   +Y+V EL +  +L   I +    ++         +LR
Sbjct: 64  ENVIAIKDIMPPPHREAFND---VYIVYELMDT-DLHQIIRSSQTLSDDHCQYFLYQLLR 119

Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMA 252
            +K  H   V+HRDLKP N L    + N  LK  DFGL+    + G+   E V + +Y A
Sbjct: 120 GLKYIHSANVLHRDLKPSNLLL---NANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRA 176

Query: 253 PEVLRR--NYGPEIDVWSAGVIIYILLCGVPPF----------------WAETEEGI--- 291
           PE+L     Y   IDVWS G I   LL   P F                 + +EE +   
Sbjct: 177 PELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFI 236

Query: 292 ----AHAIIRG-----KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
               A   IR      +  F R  +P  +  A +L++ ML  +P  R+T+EE L +P++
Sbjct: 237 RNEKARRYIRSLPYTPRQSFAR-LFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYL 294

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score =  108 bits (272), Expect = 6e-26
 Identities = 90/300 (30%), Positives = 134/300 (44%), Gaps = 47/300 (15%)

Query: 83  YTFGKELGRGEFGITHQCFEIET--GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           Y   KELG+G +GI       ET   ET A KKI     K +I      RE++++RH   
Sbjct: 2   YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSK-KILAKRALRELKLLRHFRG 60

Query: 141 HPNIVTYKEA----YEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
           H NI    +       + + +YL  EL E  +L   I +    T+    +    IL  +K
Sbjct: 61  HKNITCLYDMDIVFPGNFNELYLYEELMEA-DLHQIIRSGQPLTDAHFQSFIYQILCGLK 119

Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG----EQF-CEIVGSPYYM 251
             H   V+HRDLKP N L    + + +LK  DFGL+  F         F  E V + +Y 
Sbjct: 120 YIHSANVLHRDLKPGNLLV---NADCELKICDFGLARGFSENPGENAGFMTEYVATRWYR 176

Query: 252 APEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----------------TEEGIAH 293
           APE++   ++Y   IDVWS G I+  LL   P F  +                 EE ++ 
Sbjct: 177 APEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSR 236

Query: 294 -------AIIRG-----KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
                    IR      K  FE   +P  +  A +L++ +L  +P  R+++EE LE+P++
Sbjct: 237 IGSPKAQNYIRSLPNIPKKPFESI-FPNANPLALDLLEKLLAFDPTKRISVEEALEHPYL 295

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score =  108 bits (271), Expect = 6e-26
 Identities = 82/255 (32%), Positives = 128/255 (50%), Gaps = 26/255 (10%)

Query: 87  KELGRGEFG---ITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVE--IMRHLPKH 141
           K LG+G FG   +  +    + G+ YA K + K  LK     D VR ++E  I+  +  H
Sbjct: 2   KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVR---DRVRTKMERDILAEV-NH 57

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           P IV    A++ +  +YL+++   GG+LF R+  +  +TE         +   +   H  
Sbjct: 58  PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL 117

Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FCEIVGSPYYMAPEVL- 256
           G+++RDLKPEN L     E   +K  DFGLS      E+    FC   G+  YMAPEV+ 
Sbjct: 118 GIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFC---GTVEYMAPEVVN 171

Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAK 315
           RR +    D WS GV+++ +L G  PF  +  +     I++ K+       P+ +S EA+
Sbjct: 172 RRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGM-----PQFLSPEAQ 226

Query: 316 ELVKNMLDPNPYNRL 330
            L++ +   NP NRL
Sbjct: 227 SLLRALFKRNPANRL 241

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score =  107 bits (270), Expect = 6e-26
 Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 48/288 (16%)

Query: 92  GEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAY 151
           G +G+ ++  + +TGE  A KK+  EK K    I  +R E+ I+  L +HPNIVT KE  
Sbjct: 16  GTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLR-EINILLKL-QHPNIVTVKEVV 73

Query: 152 --EDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDL 208
              + D IY+VME  E  +L   +   K  + +     +   +L  V   H+N ++HRDL
Sbjct: 74  VGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDL 132

Query: 209 KPENFLFADGSENSQLKAIDFGLSIFF-KPGEQFCEIVGSPYYMAPEVL--RRNYGPEID 265
           K  N L    +    LK  DFGL+  +  P + + ++V + +Y APE+L   + Y   ID
Sbjct: 133 KTSNLLL---NNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAID 189

Query: 266 VWSAGVIIYILLCGVPPF-----------------------WAETEEGIAHAIIRGKIDF 302
           +WS G I   LL   P F                       W    E +  A    K  F
Sbjct: 190 MWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSE-LPGA---KKKTF 245

Query: 303 ERDPWPKVSKEAK---------ELVKNMLDPNPYNRLTLEEVLENPWI 341
            + P+ ++ K+           +L+  +L  +P  R++ E+ L++P+ 
Sbjct: 246 TKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score =  106 bits (265), Expect = 1e-25
 Identities = 78/265 (29%), Positives = 130/265 (49%), Gaps = 18/265 (6%)

Query: 86  GKELGRGEFGITHQCFEIETGETYACKKIA--KEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           GK LG+G FG  + C++++TG   A K++    E  +T  ++  +  E++++++L +H  
Sbjct: 7   GKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-QHER 65

Query: 144 IVTYKEAYEDK--DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           IV Y     D+    + + ME   GG + D++   G  TE       + IL  +   H N
Sbjct: 66  IVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN 125

Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFG----LSIFFKPGEQFCEIVGSPYYMAPEVLR 257
            ++HRD+K  N L  D + N +L   DFG    L      G     + G+PY+M+PEV+ 
Sbjct: 126 MIVHRDIKGANIL-RDSAGNVKLG--DFGASKRLQTICMSGTGIRSVTGTPYWMSPEVIS 182

Query: 258 -RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAK 315
              YG + DVWS G  +  +L   PP WAE E     AI +          P  +S+ A+
Sbjct: 183 GEGYGRKADVWSLGCTVVEMLTEKPP-WAEYEA--MAAIFKIATQPTNPQLPSHISEHAR 239

Query: 316 ELVKNMLDPNPYNRLTLEEVLENPW 340
           + +  +      +R + EE+L +P+
Sbjct: 240 DFLGCIF-VEARHRPSAEELLRHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score =  106 bits (265), Expect = 1e-25
 Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 28/279 (10%)

Query: 73  NPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
           NP E      +   + +G G +G  ++   + TGE  A K I   KL+   D   V++E+
Sbjct: 6   NPQE-----DFELIQRIGSGTYGDVYKARNVNTGELAAIKVI---KLEPGEDFAVVQQEI 57

Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
            +M+   KH NIV Y  +Y  +D +++ ME C GG L D     G  +E   A V +  L
Sbjct: 58  IMMKDC-KHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETL 116

Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-EQFCEIVGSPYYM 251
           + +   H  G MHRD+K  N L  D   N  +K  DFG+S        +    +G+PY+M
Sbjct: 117 QGLYYLHSKGKMHRDIKGANILLTD---NGHVKLADFGVSAQITATIAKRKSFIGTPYWM 173

Query: 252 APEVL----RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
           APEV     +  Y    D+W+ G+    L    PP +      +    +  K +F+    
Sbjct: 174 APEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMF--DLHPMRALFLMTKSNFQP--- 228

Query: 308 PKVSKEAK------ELVKNMLDPNPYNRLTLEEVLENPW 340
           PK+  + K        VK  L  NP  R T E++L++P+
Sbjct: 229 PKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score =  107 bits (270), Expect = 1e-25
 Identities = 80/270 (29%), Positives = 131/270 (48%), Gaps = 25/270 (9%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK--HPNIVT 146
           LGRG FG        +TGE YA K + K  +    +++ +  E  I        HP +V 
Sbjct: 7   LGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVN 66

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
               ++ +D +  VME   GG+L   I +   ++E  A      ++  ++  HEN +++R
Sbjct: 67  LFACFQTEDHVCFVMEYAAGGDLMMHI-HTDVFSEPRAVFYAACVVLGLQYLHENKIVYR 125

Query: 207 DLKPENFLF-ADGSENSQLKAIDFGLSI----FFKPGEQFCEIVGSPYYMAPEVL-RRNY 260
           DLK +N L   +G     +K  DFGL      F      FC   G+P ++APEVL   +Y
Sbjct: 126 DLKLDNLLLDTEG----FVKIADFGLCKEGMGFGDRTSTFC---GTPEFLAPEVLTETSY 178

Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
              +D W  GV+IY +L G  PF  + EE +  +I+  ++ + R     +S+EA  +++ 
Sbjct: 179 TRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR----FLSREAISIMRR 234

Query: 321 MLDPNPYNRL-----TLEEVLENPWIKNDN 345
           +L  NP  RL       E+V + P+ ++ N
Sbjct: 235 LLRRNPERRLGSGEKDAEDVKKQPFFRDIN 264

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score =  107 bits (269), Expect = 1e-25
 Identities = 74/250 (29%), Positives = 128/250 (51%), Gaps = 17/250 (6%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K LG+G FG         T E +A K + K+ +  + D++    E  ++    +HP +  
Sbjct: 1   KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTH 60

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
               ++ K+ ++ VME   GG+L   I + G + E  A      I+  ++  H+ G+++R
Sbjct: 61  LFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYR 120

Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FCEIVGSPYYMAPEVLR-RNYG 261
           DLK +N L     ++  +K  DFG+      GE     FC   G+P Y+APE+L+ + Y 
Sbjct: 121 DLKLDNVLL---DKDGHIKIADFGMCKENMNGEGKASTFC---GTPDYIAPEILKGQKYN 174

Query: 262 PEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKELVKN 320
             +D WS GV++Y +L G  PF  E E+ +  +I+      +R  +P+ +SKEAK+ +  
Sbjct: 175 ESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN-----DRPHFPRWISKEAKDCLSK 229

Query: 321 MLDPNPYNRL 330
           + + +P  RL
Sbjct: 230 LFERDPTKRL 239

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score =  106 bits (266), Expect = 1e-25
 Identities = 81/265 (30%), Positives = 128/265 (48%), Gaps = 12/265 (4%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           LG+G FG    C    TG+ YACKK+ K+++K          E +I+  +     +V+  
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSR-FVVSLA 66

Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTILRIVKVCHENGVMHR 206
            AYE KDA+ LV+ L  GG+L   I + G   + E  A      I   ++  H+  +++R
Sbjct: 67  YAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYR 126

Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEID 265
           DLKPEN L  D   +  ++  D GL++    G+     VG+  YMAPEV++   Y    D
Sbjct: 127 DLKPENILLDD---HGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPD 183

Query: 266 VWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPN 325
            W+ G ++Y ++ G  PF    ++     + R   + + +   K S +A+ L K +L  +
Sbjct: 184 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKD 243

Query: 326 PYNRL-----TLEEVLENPWIKNDN 345
           P  RL        EV E+P  K  N
Sbjct: 244 PKERLGCQGGGAREVKEHPLFKQIN 268

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score =  106 bits (266), Expect = 1e-25
 Identities = 85/278 (30%), Positives = 131/278 (47%), Gaps = 38/278 (13%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKE---KLKTEIDIDDVRREVEIMRHLPKHPNIV 145
           LG G  G   +C    TG  +A K I  +    L+ +I      RE+EI +   K P IV
Sbjct: 9   LGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQI-----LRELEINKSC-KSPYIV 62

Query: 146 TYKEAYEDK--DAIYLVMELCEGGELFDRIVNK-----GHYTERAAAAVGKTILRIVKVC 198
            Y  A+ D+   +I + ME CEGG L D I  K     G   E+    + +++L+ +   
Sbjct: 63  KYYGAFLDESSSSIGIAMEYCEGGSL-DSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYL 121

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE----QFCEIVGSPYYMAPE 254
           H   ++HRD+KP N L    +   Q+K  DFG+S     GE          G+ +YMAPE
Sbjct: 122 HSRKIIHRDIKPSNILL---TRKGQVKLCDFGVS-----GELVNSLAGTFTGTSFYMAPE 173

Query: 255 VLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIA-----HAIIRGKI-DFERDPW 307
            ++ + Y    DVWS G+ +  +     PF  E E  +        I+     + + +P 
Sbjct: 174 RIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPG 233

Query: 308 PKV--SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
             +  S+E K+ +K  L+ +P  R T  ++LE+PWIK 
Sbjct: 234 NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKA 271

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score =  106 bits (265), Expect = 1e-25
 Identities = 80/281 (28%), Positives = 132/281 (46%), Gaps = 39/281 (13%)

Query: 86  GKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---------EVEIMR 136
           G+ +G+G +G  +    + TGE  A K++  E   T     D R+         E+E ++
Sbjct: 6   GELIGKGTYGRVYLALNVTTGEMMAVKQV--ELPATIAGRHDSRQKDMVKALRSEIETLK 63

Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
            L  H NIV Y      ++ + + +E   GG +   +   G + E+      + +L  + 
Sbjct: 64  DL-DHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLA 122

Query: 197 VCHENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLS-----IFFKPGEQFCEIVGSPYY 250
             H  G++HRDLK +N L  ADG      K  DFG+S     I+    +Q   + GS ++
Sbjct: 123 YLHSKGILHRDLKADNLLVDADGI----CKISDFGISKKSDDIY--DNDQNMSMQGSVFW 176

Query: 251 MAPEVL---RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER--- 304
           MAPEV+    + Y  ++D+WS G ++  +  G  P W+  EE IA A+   K+  +R   
Sbjct: 177 MAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRP-WS-DEEAIA-AMF--KLGNKRSAP 231

Query: 305 ----DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
               D    +S  A + +      NP NR T  E+L++P+I
Sbjct: 232 PIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score =  106 bits (267), Expect = 2e-25
 Identities = 72/244 (29%), Positives = 122/244 (50%), Gaps = 10/244 (4%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           +G+G FG   Q  + +T   YA K I K  + +  ++     E  ++  +   P IV  K
Sbjct: 1   IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV-NCPFIVPLK 59

Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDL 208
            +++  + +YLV+    GGELF  +  +G +    A      +L  ++  H+  V++RDL
Sbjct: 60  FSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDL 119

Query: 209 KPENFLFADGSENSQLKAIDFGL-SIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDV 266
           KPEN L  D   +  L   DFGL  +  K  ++     G+P Y+APE+L    Y   +D 
Sbjct: 120 KPENILL-DYQGHIAL--CDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDW 176

Query: 267 WSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNP 326
           W+ GV++Y +L G+PPF+ E    +   I++  + F         ++AK+L+  +L  +P
Sbjct: 177 WTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDG----FDRDAKDLLIGLLSRDP 232

Query: 327 YNRL 330
             RL
Sbjct: 233 TRRL 236

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score =  106 bits (265), Expect = 2e-25
 Identities = 83/288 (28%), Positives = 126/288 (43%), Gaps = 44/288 (15%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKI---AKEKL-KTEIDIDDVRREVEIMRHLPKHP 142
           ++LG G +   ++     TGE  A K+I   A+E    T I      RE+ +M+ L KH 
Sbjct: 6   EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAI------REISLMKEL-KHE 58

Query: 143 NIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           NIV   +    ++ + LV E  +    +  D    +G        +    +L+ +  CHE
Sbjct: 59  NIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE 118

Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL--R 257
           N V+HRDLKP+N L    ++  +LK  DFGL+  F  P   F   V + +Y AP+VL   
Sbjct: 119 NRVLHRDLKPQNLLI---NKRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGS 175

Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR------------------GK 299
           R Y   ID+WS G I+  ++ G P F     E     I R                   K
Sbjct: 176 RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYK 235

Query: 300 IDFERDP-------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
             F R P       +P       +L+  +L  NP  R++  + L++PW
Sbjct: 236 PTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPW 283

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score =  106 bits (268), Expect = 2e-25
 Identities = 96/335 (28%), Positives = 146/335 (43%), Gaps = 55/335 (16%)

Query: 76  EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           + +IL KY   ++LG+G +GI  +  +  T E  A KKI  +  +   D     RE+  +
Sbjct: 2   DKHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIF-DAFRNATDAQRTFREIMFL 60

Query: 136 RHLPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGK 189
           + L  HPNIV      K A  DKD IYLV E  E     D   ++      +     +  
Sbjct: 61  QELGDHPNIVKLLNVIK-AENDKD-IYLVFEYMET----DLHAVIRANILEDVHKRYIMY 114

Query: 190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ------FCE 243
            +L+ +K  H   V+HRDLKP N L    + + ++K  DFGL+      E+        +
Sbjct: 115 QLLKALKYIHSGNVIHRDLKPSNILL---NSDCRVKLADFGLARSLSELEENPENPVLTD 171

Query: 244 IVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPF----------------WA 285
            V + +Y APE+L     Y   +D+WS G I+  +L G P F                  
Sbjct: 172 YVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGP 231

Query: 286 ETEEGI-------AHAIIRGKIDFERDP----WPKVSKEAKELVKNMLDPNPYNRLTLEE 334
            + E I       A  ++       R P     PK S +A +L+K +L  NP  RLT EE
Sbjct: 232 PSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEE 291

Query: 335 VLENPWIKN-DNHAPNVSLGGNVTSRI---KQFSI 365
            LE+P++    N +    L   +T  +    + S+
Sbjct: 292 ALEHPYVAQFHNPSDEPVLPYPITIPLDDNVKLSV 326

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score =  106 bits (267), Expect = 2e-25
 Identities = 74/256 (28%), Positives = 119/256 (46%), Gaps = 29/256 (11%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K +G+G FG          G+ YA K + K+ +  + +   +  E  ++    KHP +V 
Sbjct: 1   KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVG 60

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
              +++  D +Y V++   GGELF  +  +  + E  A      I   +   H   +++R
Sbjct: 61  LHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYR 120

Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ-------FCEIVGSPYYMAPEVLRRN 259
           DLKPEN L         +   DFGL    K G +       FC   G+P Y+APEVLR+ 
Sbjct: 121 DLKPENILLDS---QGHVVLTDFGLC---KEGIEHSKTTSTFC---GTPEYLAPEVLRKQ 171

Query: 260 -YGPEIDVWSAGVIIYILLCGVPPFW----AETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
            Y   +D W  G ++Y +L G+PPF+    AE  + I +  +R K        P +S  A
Sbjct: 172 PYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLK--------PNISVSA 223

Query: 315 KELVKNMLDPNPYNRL 330
           + L++ +L  +   RL
Sbjct: 224 RHLLEGLLQKDRTKRL 239

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score =  105 bits (264), Expect = 3e-25
 Identities = 88/301 (29%), Positives = 139/301 (46%), Gaps = 35/301 (11%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D+     ELG+G +G  ++     TG T A K+I  E    E   + +  E++I+ H   
Sbjct: 1   DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDIL-HKAV 57

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAV-GKTILRIVK--- 196
            P IV +  A+  + A+Y+ ME  + G L D++   G  TE     V  +    +VK   
Sbjct: 58  SPYIVDFYGAFFIEGAVYMCMEYMDAGSL-DKLYAGGVATEGIPEDVLRRITYAVVKGLK 116

Query: 197 -VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI----VGSPYYM 251
            +  E+ ++HRD+KP N L    + N Q+K  DFG+S     G     +    +G   YM
Sbjct: 117 FLKEEHNIIHRDVKPTNVLV---NGNGQVKLCDFGVS-----GNLVASLAKTNIGCQSYM 168

Query: 252 APEVLRR-------NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGI---AHAIIRGKID 301
           APE ++         Y  + DVWS G+ I  +  G  P+  ET   I     AI+ G  D
Sbjct: 169 APERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDG--D 226

Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIK 361
               P    S +A++ V   L+  P  R T  ++LE+PW+    +  +V +   VT  +K
Sbjct: 227 PPTLP-SGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKN-ADVDMAEWVTGALK 284

Query: 362 Q 362
           +
Sbjct: 285 R 285

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score =  104 bits (261), Expect = 5e-25
 Identities = 80/266 (30%), Positives = 124/266 (46%), Gaps = 30/266 (11%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           LG+G FG         TG+ YACKK+ K++LK +        E EI+  +   P IV   
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV-NSPFIVNLA 59

Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKG----------HYTERAAAAVGKTILRIVKVC 198
            A+E K  + LVM L  GG+L   I N G          HY+    A +   IL +    
Sbjct: 60  YAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYS----AQITCGILHL---- 111

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR 258
           H   +++RD+KPEN L  D       +  D GL++  K G+   +  G+  YMAPE+L+ 
Sbjct: 112 HSMDIVYRDMKPENVLLDD---QGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKE 168

Query: 259 N-YGPEIDVWSAGVIIYILLCGVPPFWAETE----EGIAHAIIRGKIDFERDPWPKVSKE 313
             Y   +D ++ G  IY ++ G  PF    E    E +    +  ++ FE       ++E
Sbjct: 169 EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQ---NFTEE 225

Query: 314 AKELVKNMLDPNPYNRLTLEEVLENP 339
           +K++ +  L   P +RL   E  ++P
Sbjct: 226 SKDICRLFLAKKPEDRLGSREKNDDP 251

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score =  104 bits (260), Expect = 5e-25
 Identities = 75/249 (30%), Positives = 121/249 (48%), Gaps = 15/249 (6%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIA--KEKLKTEIDIDDVRREVEIMRHLPK 140
           +  GK LG+G FG  + C++ +TG   A K++    E  +T  +++ +  E++++++L  
Sbjct: 4   WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-L 62

Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
           H  IV Y     D  +  + + ME   GG + D++ + G  TE       + IL  V   
Sbjct: 63  HERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYL 122

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK----PGEQFCEIVGSPYYMAPE 254
           H N ++HRD+K  N L  D   N +L   DFG S   +     G     + G+PY+M+PE
Sbjct: 123 HSNMIVHRDIKGANIL-RDSVGNVKLG--DFGASKRLQTICLSGTGMKSVTGTPYWMSPE 179

Query: 255 VLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           V+    YG + D+WS G  +  +L   PP WAE E   A   I  +      P P VS  
Sbjct: 180 VISGEGYGRKADIWSVGCTVVEMLTEKPP-WAEFEAMAAIFKIATQPTNPVLP-PHVSDH 237

Query: 314 AKELVKNML 322
            ++ +K + 
Sbjct: 238 CRDFLKRIF 246

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score =  104 bits (260), Expect = 6e-25
 Identities = 66/255 (25%), Positives = 109/255 (42%), Gaps = 12/255 (4%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           +G+G FG+  +         YA K+I   K+    + ++   E  ++  L     I+ Y 
Sbjct: 8   IGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRR-EREEAIDEARVLAKL-DSSYIIRYY 65

Query: 149 EAYEDKDAIYLVMELCEGGELFDRI--VNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
           E++ DK  + +VME  E G+L   +         E         IL  +   H   ++HR
Sbjct: 66  ESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHR 125

Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYYMAPEVLR-RNYGPEI 264
           D+K  N           +K  D G++        F   IVG+PYY++PE+   + Y  + 
Sbjct: 126 DIKSLNLFL---DAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKS 182

Query: 265 DVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDP 324
           DVW+ GV++Y    G  PF A  +  +   IIRG   F        S++  +L+   L  
Sbjct: 183 DVWALGVVLYECCTGKHPFDANNQGALILKIIRGV--FPPVSQM-YSQQLAQLIDQCLTK 239

Query: 325 NPYNRLTLEEVLENP 339
           +   R    ++L NP
Sbjct: 240 DYRQRPDTFQLLRNP 254

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score =  104 bits (261), Expect = 7e-25
 Identities = 71/298 (23%), Positives = 123/298 (41%), Gaps = 52/298 (17%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD------VRREVEIMR 136
           Y    E+G G +G  ++  ++ TG   A KK+        + + +        RE+ +++
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTGRFVALKKVR-------VPLSEEGIPLSTLREIALLK 53

Query: 137 HLPK--HPNIV-----TYKEAYEDKDAIYLVMELCEG--GELFDRIVNKGHYTERAAAAV 187
            L    HPNIV      +    + +  + LV E  +        +    G         +
Sbjct: 54  QLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPG-LPPETIKDL 112

Query: 188 GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS 247
            + +LR V   H + ++HRDLKP+N L    + + Q+K  DFGL+  +        +V +
Sbjct: 113 MRQLLRGVDFLHSHRIVHRDLKPQNILV---TSDGQVKIADFGLARIYSFEMALTSVVVT 169

Query: 248 PYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAII---------- 296
            +Y APEVL + +Y   +D+WS G I   L    P F   +E      I           
Sbjct: 170 LWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEE 229

Query: 297 --------------RGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
                              F +   P++ +E  +L+K ML  NP+ R++  E L++P+
Sbjct: 230 WPRNVSLPRSSFPSYTPRSF-KSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPY 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score =  103 bits (259), Expect = 8e-25
 Identities = 76/274 (27%), Positives = 124/274 (45%), Gaps = 25/274 (9%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIA---KEKLKTEIDIDDVRREVEIMRHLP 139
           +T G+ LG+G +G T  C     G+  A K++       L  E + + ++ EV++++ L 
Sbjct: 2   WTKGEVLGKGAYG-TVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL- 59

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           KH NIV Y     D + I + ME   GG +   +   G   E       K IL  V   H
Sbjct: 60  KHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLH 119

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFG-------LSIFFKPGEQFCEIVGSPYYMA 252
            N V+HRD+K  N +      N  +K IDFG       + +          + G+PY+MA
Sbjct: 120 NNCVVHRDIKGNNVMLM---PNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMA 176

Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV- 310
           PEV+  + YG + D+WS G  ++ +  G PP  A  +   A   I       R   P++ 
Sbjct: 177 PEVINESGYGRKSDIWSIGCTVFEMATGKPP-LASMDRLAAMFYIGA----HRGLMPRLP 231

Query: 311 ---SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
              S  A + V + L  + + R +  ++L + ++
Sbjct: 232 DSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score =  103 bits (259), Expect = 8e-25
 Identities = 73/269 (27%), Positives = 123/269 (45%), Gaps = 17/269 (6%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIA---KEKLKTEIDIDDVRREVEIMRHLP 139
           +  G++LG G F   +Q  +++TG   A K++        + E  ++ +R+E+ +M  L 
Sbjct: 2   WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL- 60

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
            HP+I+    A  +     L +E   GG +   +   G + E       + +LR +   H
Sbjct: 61  NHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLH 120

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-----FFKPGEQFCEIVGSPYYMAPE 254
           EN ++HRD+K  N L    S   +L+  DFG +          GE   +++G+  +MAPE
Sbjct: 121 ENQIIHRDVKGANLLI--DSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPE 178

Query: 255 VLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP---KV 310
           VLR   YG   DVWS G +I  +    PP W   +     A+I  KI            +
Sbjct: 179 VLRGEQYGRSCDVWSVGCVIIEMATAKPP-WNAEKHSNHLALIF-KIASATTAPSIPEHL 236

Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENP 339
           S   +++    L+  P +R    E+L++P
Sbjct: 237 SPGLRDVTLRCLELQPEDRPPSRELLKHP 265

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score =  103 bits (257), Expect = 2e-24
 Identities = 81/265 (30%), Positives = 124/265 (46%), Gaps = 12/265 (4%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           LG+G FG    C    TG+ YACKK+ K+++K          E  I+  +     +V+  
Sbjct: 8   LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-NSRFVVSLA 66

Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTILRIVKVCHENGVMHR 206
            AYE KDA+ LV+ +  GG+L   I N G+  + E+ A      +   ++      +++R
Sbjct: 67  YAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYR 126

Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEID 265
           DLKPEN L  D      ++  D GL++    GE     VG+  YMAPEV+    Y    D
Sbjct: 127 DLKPENILLDD---RGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPD 183

Query: 266 VWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPN 325
            W  G +IY ++ G  PF    E      + R   + + +   K S++AK + + +L  N
Sbjct: 184 WWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKN 243

Query: 326 PYNRLTLE-----EVLENPWIKNDN 345
           P  RL         V ++P  KN N
Sbjct: 244 PKERLGCRGNGAAGVKQHPIFKNIN 268

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score =  102 bits (257), Expect = 3e-24
 Identities = 82/295 (27%), Positives = 140/295 (47%), Gaps = 45/295 (15%)

Query: 81  DKY-TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIM 135
           +KY   G  +G G +G+  +C   ETG+  A KK     L++E D   V+    RE+ ++
Sbjct: 1   EKYENLGL-VGEGSYGMVMKCKHKETGQIVAIKKF----LESE-DDKMVKKIAMREIRML 54

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
           + L +H N+V   E +  K  +YLV E  +   L D         E         ILR +
Sbjct: 55  KQL-RHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGI 113

Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPE 254
           + CH + ++HRD+KPEN L    S++  +K  DFG +     PGE + + V + +Y APE
Sbjct: 114 EFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPE 170

Query: 255 VLRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAII--------RGKIDFER 304
           +L  +  YG  +D+W+ G ++  +L G P F  +++    + II        R +  F++
Sbjct: 171 LLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQK 230

Query: 305 DP-------------------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
           +P                   +PK+S    +L K  L  +P +R +  ++L + +
Sbjct: 231 NPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score =  104 bits (260), Expect = 3e-24
 Identities = 86/276 (31%), Positives = 130/276 (47%), Gaps = 14/276 (5%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + Y   K +GRG FG         T + YA K ++K ++    D      E +IM     
Sbjct: 43  EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FAN 101

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
            P +V    A++D   +Y+VME   GG+L + + N     + A     + +L +  + H 
Sbjct: 102 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAI-HS 160

Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEI-VGSPYYMAPEVLRR 258
            G +HRD+KP+N L     ++  LK  DFG  +   K G   C+  VG+P Y++PEVL+ 
Sbjct: 161 MGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 217

Query: 259 N-----YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
                 YG E D WS GV +Y +L G  PF+A++  G    I+  K          +SKE
Sbjct: 218 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKE 277

Query: 314 AKELVKNMLDPNP--YNRLTLEEVLENPWIKNDNHA 347
           AK L+   L        R  +EE+  + + KND  A
Sbjct: 278 AKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWA 313

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score =  103 bits (257), Expect = 4e-24
 Identities = 77/260 (29%), Positives = 123/260 (47%), Gaps = 15/260 (5%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           +E+G G FG  +   ++ T E  A KK++    ++     D+ +EV+ ++ + KHPN + 
Sbjct: 31  REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI-KHPNSIE 89

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
           YK  Y  +   +LVME C G       V+K    E   AA+    L+ +   H + ++HR
Sbjct: 90  YKGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHR 149

Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL----RRNYGP 262
           D+K  N L    +E  Q+K  DFG +    P   F   VG+PY+MAPEV+       Y  
Sbjct: 150 DIKAGNILL---TEPGQVKLADFGSASIASPANSF---VGTPYWMAPEVILAMDEGQYDG 203

Query: 263 EIDVWSAGVIIYILLCGVPP-FWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNM 321
           ++DVWS G+    L    PP F       + H         + + W   S   +  V + 
Sbjct: 204 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEW---SDYFRNFVDSC 260

Query: 322 LDPNPYNRLTLEEVLENPWI 341
           L   P +R T EE+L++ ++
Sbjct: 261 LQKIPQDRPTSEELLKHMFV 280

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score =  103 bits (257), Expect = 5e-24
 Identities = 77/271 (28%), Positives = 125/271 (46%), Gaps = 19/271 (7%)

Query: 81  DKYTFGKELGRGEFG-ITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           + + F + LG G FG +    ++ E     A K+  K K+  +  +D V  E +I+ ++ 
Sbjct: 30  EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI- 88

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
            HP  V    +++D+  +YLV+E   GGE F  +     +           I+ I +   
Sbjct: 89  NHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQ 148

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR- 258
              +++RDLKPEN L     ++  +K  DFG +       +   + G+P Y+APE+L   
Sbjct: 149 SLNIVYRDLKPENLLL---DKDGFIKMTDFGFAKVVD--TRTYTLCGTPEYIAPEILLNV 203

Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +G   D W+ G+ IY +L G PPF+A     I   I+ G I F     PK +    K L
Sbjct: 204 GHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYF-----PKFLDNNCKHL 258

Query: 318 VKNMLDPNPYNRL-----TLEEVLENPWIKN 343
           +K +L  +   R        + V E+PW  N
Sbjct: 259 MKKLLSHDLTKRYGNLKKGAQNVKEHPWFGN 289

Length = 340

>gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

 Score = 98.2 bits (245), Expect = 6e-24
 Identities = 50/150 (33%), Positives = 82/150 (54%), Gaps = 5/150 (3%)

Query: 380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGL 439
            L ++Q+ ++K+ F + D D +G +   EL   L  +G   S+ ++  L E  D  GN  
Sbjct: 13  QLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEID-AGNET 71

Query: 440 LSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNG-DQT 497
           +   EF+T MSV LKR   ++ L +AF+ FDK+  G+I + EL+ VL   + G    D+ 
Sbjct: 72  VDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVL--KSLGERLSDEE 129

Query: 498 IRDILRDVDLDRDGRISFEEFKAMMTSGAD 527
           +  +L++ D D DG I +EEFK ++     
Sbjct: 130 VEKLLKEYDEDGDGEIDYEEFKKLIKDSPT 159

Length = 160

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score =  103 bits (258), Expect = 6e-24
 Identities = 83/275 (30%), Positives = 135/275 (49%), Gaps = 18/275 (6%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + Y   K +GRG FG         + + YA K ++K ++    D      E +IM     
Sbjct: 43  EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FAN 101

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
            P +V    A++D   +Y+VME   GG+L + + N     E+ A      ++  +   H 
Sbjct: 102 SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHS 160

Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-KPGEQFCEI-VGSPYYMAPEVLRR 258
            G++HRD+KP+N L     ++  LK  DFG  +   + G   C+  VG+P Y++PEVL+ 
Sbjct: 161 MGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKS 217

Query: 259 N-----YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAII--RGKIDFERDPWPKVS 311
                 YG E D WS GV ++ +L G  PF+A++  G    I+  +  ++F  D   ++S
Sbjct: 218 QGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPED--VEIS 275

Query: 312 KEAKELVKNMLDPNP--YNRLTLEEVLENPWIKND 344
           K AK L+   L        R  +EE+ ++P+ KND
Sbjct: 276 KHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score =  102 bits (254), Expect = 7e-24
 Identities = 77/262 (29%), Positives = 117/262 (44%), Gaps = 15/262 (5%)

Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           E+G G FG  +      T E  A KK++    +T     D+ +EV+ ++ L KHPN + Y
Sbjct: 28  EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-KHPNTIEY 86

Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRD 207
           K  Y  +   +LVME C G       V+K    E   AA+    L+ +   H + ++HRD
Sbjct: 87  KGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRD 146

Query: 208 LKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL----RRNYGPE 263
           +K  N L    +E  Q+K  DFG +    P   F   VG+PY+MAPEV+       Y  +
Sbjct: 147 IKAGNILL---TEPGQVKLADFGSASKSSPANSF---VGTPYWMAPEVILAMDEGQYDGK 200

Query: 264 IDVWSAGVIIYILLCGVPP-FWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNML 322
           +DVWS G+    L    PP F       + H         + + W   +   +  V   L
Sbjct: 201 VDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEW---TDSFRGFVDYCL 257

Query: 323 DPNPYNRLTLEEVLENPWIKND 344
              P  R    E+L + +++ D
Sbjct: 258 QKIPQERPASAELLRHDFVRRD 279

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score =  101 bits (252), Expect = 7e-24
 Identities = 78/273 (28%), Positives = 141/273 (51%), Gaps = 34/273 (12%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           +G G +G  ++   ++TG+  A K +      T  + +++++E+ +++    H NI TY 
Sbjct: 14  VGNGTYGQVYKGRHVKTGQLAAIKVMDV----TGDEEEEIKQEINMLKKYSHHRNIATYY 69

Query: 149 EAYEDK------DAIYLVMELCEGGELFDRIVN-KGH-YTERAAAAVGKTILRIVKVCHE 200
            A+  K      D ++LVME C  G + D I N KG+   E   A + + ILR +   H+
Sbjct: 70  GAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ 129

Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-KPGEQFCEIVGSPYYMAPEVLRRN 259
           + V+HRD+K +N L    +EN+++K +DFG+S    +   +    +G+PY+MAPEV+  +
Sbjct: 130 HKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 186

Query: 260 YGPEI------DVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV--- 310
             P+       D+WS G+    +  G PP          H  +R      R+P P++   
Sbjct: 187 ENPDATYDFKSDLWSLGITAIEMAEGAPPLCD------MHP-MRALFLIPRNPAPRLKSK 239

Query: 311 --SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
             SK+ +  +++ L  N   R T E+++++P+I
Sbjct: 240 KWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score =  101 bits (254), Expect = 1e-23
 Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 15/253 (5%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           + F   LG+G FG         T E YA K + K+ +  + D++    E  ++    K P
Sbjct: 2   FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPP 61

Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
            +      ++  D +Y VME   GG+L   I   G + E  A      I   +   H  G
Sbjct: 62  FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRG 121

Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLS----IFFKPGEQFCEIVGSPYYMAPEVLR- 257
           +++RDLK +N +         +K  DFG+     +       FC   G+P Y+APE++  
Sbjct: 122 IIYRDLKLDNVML---DSEGHIKIADFGMCKEHMVDGVTTRTFC---GTPDYIAPEIIAY 175

Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
           + YG  +D W+ GV++Y +L G PPF  E E+ +  +I+   + + +     +SKEA  +
Sbjct: 176 QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSI 231

Query: 318 VKNMLDPNPYNRL 330
            K ++  +P  RL
Sbjct: 232 CKGLMTKHPSKRL 244

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score =  102 bits (256), Expect = 1e-23
 Identities = 80/304 (26%), Positives = 130/304 (42%), Gaps = 53/304 (17%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K +G G FG      +++T   YA K + K  +        V+ E +I+     +  +V 
Sbjct: 7   KTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAE-ADNEWVVK 65

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
              +++DKD +Y VM+   GG++   ++  G + E  A      +   ++  H+ G +HR
Sbjct: 66  LYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHR 125

Query: 207 DLKPENFLFADGSENSQLKAIDFGL---------SIFFKPG------------------- 238
           D+KP+N L      +  +K  DFGL         S +++ G                   
Sbjct: 126 DIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDR 182

Query: 239 -------------EQFC---EIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVP 281
                         Q C    +VG+P Y+APEVL R  Y    D WS GVI+Y +L G P
Sbjct: 183 CRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQP 242

Query: 282 PFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRL---TLEEVLEN 338
           PF A+T       +I  +         K+S+EA +L+   L     +RL     +E+  +
Sbjct: 243 PFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILR-LCCGAEDRLGKNGADEIKAH 301

Query: 339 PWIK 342
           P+ K
Sbjct: 302 PFFK 305

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score =  101 bits (254), Expect = 1e-23
 Identities = 84/309 (27%), Positives = 131/309 (42%), Gaps = 62/309 (20%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKI---------AKEKLKTEIDIDDVRRE 131
            +Y   + +G G +G+     +  +G+  A KKI         AK  L          RE
Sbjct: 5   SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTL----------RE 54

Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDA----IYLVMELCEGGELFDRIVNKGHYTERAAAAV 187
           ++I+RH  KH NI+  ++      A    +Y+VM+L E  +L   I +    TE      
Sbjct: 55  LKILRHF-KHDNIIAIRDILRPPGADFKDVYVVMDLMES-DLHHIIHSDQPLTEEHIRYF 112

Query: 188 GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL--SIFFKPGEQ---FC 242
              +LR +K  H   V+HRDLKP N L    +E+ +L+  DFG+   +   P E      
Sbjct: 113 LYQLLRGLKYIHSANVIHRDLKPSNLLV---NEDCELRIGDFGMARGLSSSPTEHKYFMT 169

Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVI---------------------IYILLCG 279
           E V + +Y APE+L     Y   ID+WS G I                     + + + G
Sbjct: 170 EYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLG 229

Query: 280 VPP--FWAETEEGIAHAIIRGKIDFERDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
            P                I+     +  PW    PK S EA +L+  ML  +P  R+T+E
Sbjct: 230 SPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVE 289

Query: 334 EVLENPWIK 342
           + L++P++ 
Sbjct: 290 QALQHPFLA 298

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score =  100 bits (249), Expect = 1e-23
 Identities = 73/260 (28%), Positives = 128/260 (49%), Gaps = 18/260 (6%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L  +   K++GRG+F   ++   +  G   A KK+    L       D  +E+++++ L 
Sbjct: 1   LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL- 59

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILR-IVKVC 198
            HPN++ Y  ++ + + + +V+EL + G+L   I    H+ ++      KT+ +  V++C
Sbjct: 60  NHPNVIKYYASFIEDNELNIVLELADAGDLSRMI---KHFKKQKRLIPEKTVWKYFVQLC 116

Query: 199 ------HENGVMHRDLKPEN-FLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYY 250
                 H   VMHRD+KP N F+ A G     +K  D GL  FF         +VG+PYY
Sbjct: 117 SALEHMHSRRVMHRDIKPANVFITATGV----VKLGDLGLGRFFSSKTTAAHSLVGTPYY 172

Query: 251 MAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
           M+PE +  N Y  + D+WS G ++Y +     PF+ +     +      + D+   P   
Sbjct: 173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDH 232

Query: 310 VSKEAKELVKNMLDPNPYNR 329
            S+E ++LV   ++P+P  R
Sbjct: 233 YSEELRQLVNMCINPDPEKR 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score =  101 bits (252), Expect = 1e-23
 Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 19/265 (7%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           +E+G G FG  +   ++ T E  A KK++    ++     D+ +EV  ++ L +HPN + 
Sbjct: 21  REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL-RHPNTIE 79

Query: 147 YKEAYEDKDAIYLVMELCEG--GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
           YK  Y  +   +LVME C G   ++ +  V+K    E   AA+    L+ +   H +  +
Sbjct: 80  YKGCYLREHTAWLVMEYCLGSASDILE--VHKKPLQEVEIAAICHGALQGLAYLHSHERI 137

Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL----RRNY 260
           HRD+K  N L    +E   +K  DFG +    P   F   VG+PY+MAPEV+       Y
Sbjct: 138 HRDIKAGNILL---TEPGTVKLADFGSASLVSPANSF---VGTPYWMAPEVILAMDEGQY 191

Query: 261 GPEIDVWSAGVIIYILLCGVPP-FWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK 319
             ++DVWS G+    L    PP F       + H           + W   S   +  V 
Sbjct: 192 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDW---SDYFRNFVD 248

Query: 320 NMLDPNPYNRLTLEEVLENPWIKND 344
           + L   P +R + EE+L++ ++  +
Sbjct: 249 SCLQKIPQDRPSSEELLKHRFVLRE 273

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score =  100 bits (250), Expect = 1e-23
 Identities = 79/273 (28%), Positives = 140/273 (51%), Gaps = 34/273 (12%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           +G G +G  ++   ++TG+  A K +      TE + ++++ E+ +++    H NI TY 
Sbjct: 24  VGNGTYGQVYKGRHVKTGQLAAIKVMDV----TEDEEEEIKLEINMLKKYSHHRNIATYY 79

Query: 149 EAYEDK------DAIYLVMELCEGGELFDRIVN-KGH-YTERAAAAVGKTILRIVKVCHE 200
            A+  K      D ++LVME C  G + D + N KG+   E   A + + ILR +   H 
Sbjct: 80  GAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHA 139

Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-KPGEQFCEIVGSPYYMAPEVLRRN 259
           + V+HRD+K +N L    +EN+++K +DFG+S    +   +    +G+PY+MAPEV+  +
Sbjct: 140 HKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 196

Query: 260 YGPEI------DVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV--- 310
             P+       D+WS G+    +  G PP          H  +R      R+P PK+   
Sbjct: 197 ENPDATYDYRSDIWSLGITAIEMAEGAPPLCD------MHP-MRALFLIPRNPPPKLKSK 249

Query: 311 --SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
             SK+  + ++  L  N  +R + E++L++P+I
Sbjct: 250 KWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional

 Score = 96.4 bits (240), Expect = 2e-23
 Identities = 50/149 (33%), Positives = 93/149 (62%), Gaps = 4/149 (2%)

Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 2   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61

Query: 438 GLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-GD 495
           G +   EF+T M+  +K   +++ + +AF+ FD++ +GFI   EL+ V+   N G    D
Sbjct: 62  GTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMT--NLGEKLTD 119

Query: 496 QTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           + + +++R+ D+D DG+I++EEF  MM S
Sbjct: 120 EEVDEMIREADVDGDGQINYEEFVKMMMS 148

Length = 149

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 99.7 bits (248), Expect = 2e-23
 Identities = 67/215 (31%), Positives = 109/215 (50%), Gaps = 14/215 (6%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIA--KEKLKTEIDIDDVRREVEIMRHLPK 140
           +  GK LGRG FG  + C++ +TG   A K++    +  +T  +++ +  E++++++L +
Sbjct: 4   WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-R 62

Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
           H  IV Y     D  +  + + +E   GG + D++   G  TE       + IL+ V   
Sbjct: 63  HDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYL 122

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLS----IFFKPGEQFCEIVGSPYYMAPE 254
           H N ++HRD+K  N L  D + N +L   DFG S         G     + G+PY+M+PE
Sbjct: 123 HSNMIVHRDIKGANIL-RDSAGNVKLG--DFGASKRIQTICMSGTGIKSVTGTPYWMSPE 179

Query: 255 VLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
           V+    YG + DVWS    +  +L   PP WAE E
Sbjct: 180 VISGEGYGRKADVWSVACTVVEMLTEKPP-WAEYE 213

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score =  100 bits (250), Expect = 2e-23
 Identities = 85/284 (29%), Positives = 130/284 (45%), Gaps = 40/284 (14%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           +G G +G+  +C   ET E  A KK    +   E+  +   RE++++R L K  NIV  K
Sbjct: 9   VGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVK-ETTLRELKMLRTL-KQENIVELK 66

Query: 149 EAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
           EA+  +  +YLV E  E    EL + + N G   E+  + + + I + +  CH+N ++HR
Sbjct: 67  EAFRRRGKLYLVFEYVEKNMLELLEEMPN-GVPPEKVRSYIYQLI-KAIHWCHKNDIVHR 124

Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGE--QFCEIVGSPYYMAPEVLR-RNYGPE 263
           D+KPEN L    S N  LK  DFG +     G    + E V + +Y +PE+L    YG  
Sbjct: 125 DIKPENLLI---SHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKA 181

Query: 264 IDVWSAGVIIYILLCGVPPFWAETE----------------------------EGIAHAI 295
           +D+WS G I+  L  G P F  E+E                             G+    
Sbjct: 182 VDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPA 241

Query: 296 IRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENP 339
           +      ER     +S    +L+KN+L  NP +R   E+ L +P
Sbjct: 242 VNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHP 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 99.8 bits (249), Expect = 4e-23
 Identities = 86/288 (29%), Positives = 132/288 (45%), Gaps = 34/288 (11%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           + + KY    ++G+G FG   +    +T +  A KK+  E  K    I  +R E++I++ 
Sbjct: 9   DEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALR-EIKILQL 67

Query: 138 LPKHPNIVTYKE-------AYE-DKDAIYLVMELCE---GGELFDRIVNKGHYTERAAAA 186
           L KH N+V   E        Y   K + YLV E CE    G L ++ V    +T      
Sbjct: 68  L-KHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVK---FTLSEIKK 123

Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-----QF 241
           V K +L  +   H N ++HRD+K  N L    +++  LK  DFGL+  F   +     ++
Sbjct: 124 VMKMLLNGLYYIHRNKILHRDMKAANILI---TKDGILKLADFGLARAFSLSKNSKPNRY 180

Query: 242 CEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAI--IR 297
              V + +Y  PE+L   R+YGP ID+W AG I+  +    P     TE+     I  + 
Sbjct: 181 TNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLC 240

Query: 298 GKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           G I    + WP V K   EL K M  P    R   E +   P++K+ +
Sbjct: 241 GSIT--PEVWPGVDK--LELFKKMELPQGQKRKVKERLK--PYVKDPH 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 98.1 bits (244), Expect = 6e-23
 Identities = 68/265 (25%), Positives = 132/265 (49%), Gaps = 13/265 (4%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           +Y   K++G G FG  +        E    K+I   K+  + + +  ++EV ++  + KH
Sbjct: 1   RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVK-EKEASKKEVILLAKM-KH 58

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH---YTERAAAAVGKTILRIVKVC 198
           PNIVT+  ++++   +++VME C+GG+L  RI N+     ++E    +    I   +K  
Sbjct: 59  PNIVTFFASFQENGRLFIVMEYCDGGDLMKRI-NRQRGVLFSEDQILSWFVQISLGLKHI 117

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI-VGSPYYMAPEVLR 257
           H+  ++HRD+K +N   +     ++L   DFG++       +     VG+PYY++PE+ +
Sbjct: 118 HDRKILHRDIKSQNIFLSKNGMVAKLG--DFGIARQLNDSMELAYTCVGTPYYLSPEICQ 175

Query: 258 -RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            R Y  + D+WS G ++Y L     PF       +   I +G         P  S++ + 
Sbjct: 176 NRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYF---APISPNFSRDLRS 232

Query: 317 LVKNMLDPNPYNRLTLEEVLENPWI 341
           L+  +   +P +R ++  +L+ P++
Sbjct: 233 LISQLFKVSPRDRPSITSILKRPFL 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 98.0 bits (245), Expect = 6e-23
 Identities = 76/282 (26%), Positives = 114/282 (40%), Gaps = 55/282 (19%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACK---KIAKEKLKTEIDIDDVRREVEIMRHLPK 140
             GK+LG G FG  ++      GE    K   K  KE   +E + ++   E  IM+ L  
Sbjct: 2   ELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEG-ASEEEREEFLEEASIMKKL-S 59

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC-- 198
           HPNIV         + +Y+V E   GG+L D +   G            T+  ++++   
Sbjct: 60  HPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKL---------TLKDLLQMALQ 110

Query: 199 --------HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
                        +HRDL   N L    +EN  +K  DFGLS          +I    YY
Sbjct: 111 IAKGMEYLESKNFVHRDLAARNCLV---TENLVVKISDFGLSR---------DIYEDDYY 158

Query: 251 ------------MAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAII 296
                       MAPE L+   +  + DVWS GV+++ I   G  P+   + E +   + 
Sbjct: 159 RKRGGGKLPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLE 218

Query: 297 RGKIDFERDPWPKV-SKEAKELVKNMLDPNPYNRLTLEEVLE 337
            G     R P P+    E  EL+      +P +R T  E++E
Sbjct: 219 DG----YRLPRPENCPDELYELMLQCWAYDPEDRPTFSELVE 256

Length = 258

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score =  100 bits (250), Expect = 7e-23
 Identities = 85/309 (27%), Positives = 132/309 (42%), Gaps = 57/309 (18%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K LG G FG      +++T   YA K + K+ +     +  V+ E +I+     +  +V 
Sbjct: 7   KTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAE-ADNEWVVR 65

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
              +++DKD +Y VM+   GG++   ++  G + E  A      +   V+  H+ G +HR
Sbjct: 66  LYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHR 125

Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFF------------------------------- 235
           D+KP+N L      +  +K  DFGL   F                               
Sbjct: 126 DIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPAN 182

Query: 236 -------KPGE-------QFC---EIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILL 277
                  KP E       Q C    +VG+P Y+APEV LR  Y    D WS GVI+Y +L
Sbjct: 183 CRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 242

Query: 278 CGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRL---TLEE 334
            G PPF A+T       +I  +      P  K+S EA +L+  +    P +RL     +E
Sbjct: 243 VGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLCR-GPEDRLGKNGADE 301

Query: 335 VLENPWIKN 343
           +  +P+ K 
Sbjct: 302 IKAHPFFKT 310

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 98.2 bits (244), Expect = 8e-23
 Identities = 70/268 (26%), Positives = 132/268 (49%), Gaps = 18/268 (6%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L  +   K++GRG+F   ++   +   +  A KK+   ++       D  +E+++++ L 
Sbjct: 1   LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL- 59

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILR-IVKVC 198
            HPN++ Y +++ + + + +V+EL + G+L   I    ++ ++      +T+ +  V++C
Sbjct: 60  NHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIK---YFKKQKRLIPERTVWKYFVQLC 116

Query: 199 ------HENGVMHRDLKPEN-FLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYY 250
                 H   VMHRD+KP N F+ A G     +K  D GL  FF         +VG+PYY
Sbjct: 117 SAVEHMHSRRVMHRDIKPANVFITATG----VVKLGDLGLGRFFSSKTTAAHSLVGTPYY 172

Query: 251 MAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
           M+PE +  N Y  + D+WS G ++Y +     PF+ +     +      + D+   P   
Sbjct: 173 MSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEH 232

Query: 310 VSKEAKELVKNMLDPNPYNRLTLEEVLE 337
            S++ +ELV   + P+P  R  +  V +
Sbjct: 233 YSEKLRELVSMCIYPDPDQRPDIGYVHQ 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 98.9 bits (246), Expect = 9e-23
 Identities = 71/256 (27%), Positives = 119/256 (46%), Gaps = 21/256 (8%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           + F   LG+G FG         T E YA K + K+ +  + D++    E  ++    K P
Sbjct: 2   FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPP 61

Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
            +      ++  D +Y VME   GG+L  +I   G + E  A      I   +   H  G
Sbjct: 62  FLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKG 121

Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGL-------SIFFKPGEQFCEIVGSPYYMAPEV 255
           +++RDLK +N +         +K  DFG+        +  K    FC   G+P Y+APE+
Sbjct: 122 IIYRDLKLDNVML---DSEGHIKIADFGMCKENMWDGVTTK---TFC---GTPDYIAPEI 172

Query: 256 LR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           +  + YG  +D W+ GV++Y +L G  PF  E E+ +  +I+   + + +     +SKEA
Sbjct: 173 IAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEA 228

Query: 315 KELVKNMLDPNPYNRL 330
             + K ++  +P  RL
Sbjct: 229 VAICKGLMTKHPGKRL 244

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 99.0 bits (246), Expect = 1e-22
 Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 18/253 (7%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           +GRG +         +T   YA K + KE +  + DID V+ E  +      HP +V   
Sbjct: 3   IGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 62

Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDL 208
             ++ +  ++ V+E   GG+L   +  +    E  A      I   +   HE G+++RDL
Sbjct: 63  SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDL 122

Query: 209 KPENFLFADGSENSQLKAIDFGL-SIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDV 266
           K +N L         +K  D+G+     +PG+      G+P Y+APE+LR  +YG  +D 
Sbjct: 123 KLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDW 179

Query: 267 WSAGVIIYILLCGVPPF---------WAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
           W+ GV+++ ++ G  PF            TE+ +   I+  +I   R     +S +A  +
Sbjct: 180 WALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAASV 235

Query: 318 VKNMLDPNPYNRL 330
           +K+ L+ +P  RL
Sbjct: 236 LKSFLNKDPKERL 248

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 97.2 bits (242), Expect = 1e-22
 Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 20/263 (7%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           LG+G +GI +   ++ T    A K+I +   +    +  +  E+ +  +L KH NIV Y 
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEIPE---RDSRYVQPLHEEIALHSYL-KHRNIVQYL 71

Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKG---HYTERAAAAVGKTILRIVKVCHENGVMH 205
            +  +     + ME   GG L   + +K       E+      K IL  +K  H+N ++H
Sbjct: 72  GSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVH 131

Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYYMAPEVL---RRNYG 261
           RD+K +N L    S    +K  DFG S          E   G+  YMAPEV+    R YG
Sbjct: 132 RDIKGDNVLVNTYS--GVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYG 189

Query: 262 PEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD--PWPK-VSKEAKELV 318
              D+WS G  I  +  G PPF    E G   A +  K+   +     P+ +S EAK  +
Sbjct: 190 APADIWSLGCTIVEMATGKPPF---IELGEPQAAMF-KVGMFKIHPEIPESLSAEAKNFI 245

Query: 319 KNMLDPNPYNRLTLEEVLENPWI 341
               +P+P  R +  ++L++P++
Sbjct: 246 LRCFEPDPDKRASAHDLLQDPFL 268

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 98.1 bits (244), Expect = 2e-22
 Identities = 69/250 (27%), Positives = 126/250 (50%), Gaps = 17/250 (6%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K LG+G FG          GE +A K + K+ +  + D++    E  ++    ++P +  
Sbjct: 1   KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTH 60

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
               ++ K+ ++ VME   GG+L   I +KG +    A      I+  ++  H  G+++R
Sbjct: 61  LYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYR 120

Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FCEIVGSPYYMAPEVLR-RNYG 261
           DLK +N +      +  +K  DFG+      G+     FC   G+P Y+APE+L+   Y 
Sbjct: 121 DLKLDNVML---DRDGHIKIADFGMCKENVFGDNRASTFC---GTPDYIAPEILQGLKYT 174

Query: 262 PEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP-WPKVSKEAKELVKN 320
             +D WS GV++Y +L G  PF  + E+ +  +I   ++D    P W  ++KE+K++++ 
Sbjct: 175 FSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESI---RVDTPHYPRW--ITKESKDILEK 229

Query: 321 MLDPNPYNRL 330
           + + +P  RL
Sbjct: 230 LFERDPTRRL 239

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 97.8 bits (243), Expect = 2e-22
 Identities = 64/202 (31%), Positives = 98/202 (48%), Gaps = 11/202 (5%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           +E+G G FG  +   ++   E  A KK++    ++     D+ +EV  ++ L +HPN + 
Sbjct: 21  REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQ 79

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
           Y+  Y  +   +LVME C G       V+K    E   AAV    L+ +   H + ++HR
Sbjct: 80  YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 139

Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL----RRNYGP 262
           D+K  N L    SE   +K  DFG +    P   F   VG+PY+MAPEV+       Y  
Sbjct: 140 DVKAGNILL---SEPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQYDG 193

Query: 263 EIDVWSAGVIIYILLCGVPPFW 284
           ++DVWS G+    L    PP +
Sbjct: 194 KVDVWSLGITCIELAERKPPLF 215

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 96.2 bits (239), Expect = 3e-22
 Identities = 73/279 (26%), Positives = 133/279 (47%), Gaps = 38/279 (13%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT--EIDIDDVR--------RE 131
           +Y   + LG+G FG  +   +         K +A+E+LK   EI + ++         +E
Sbjct: 1   RYILQQRLGKGSFGTVYLVKDK--------KAVAEERLKVLKEIPVGELNPNETVQANQE 52

Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH----YTERAAAAV 187
            +++  L  HP IV +  ++ ++DA  ++ E CEG +L  ++    H     +E      
Sbjct: 53  AQLLSKL-DHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEW 111

Query: 188 GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI--- 244
              +L  V   H+  ++HRDLK +N       +N+ LK  DFG+S         C++   
Sbjct: 112 FIQLLLGVHYMHQRRILHRDLKAKNIFL----KNNLLKIGDFGVSRLLMGS---CDLATT 164

Query: 245 -VGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF 302
             G+PYYM+PE L+ + Y  + D+WS G I+Y + C    F  +    +   I+ G    
Sbjct: 165 FTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPS 224

Query: 303 ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
             + +    ++   ++++ML+ +P  R +  E+L NP+I
Sbjct: 225 LPETYS---RQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 97.5 bits (243), Expect = 4e-22
 Identities = 84/329 (25%), Positives = 133/329 (40%), Gaps = 72/329 (21%)

Query: 76  EGNILDKYTF-GKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD------- 127
             +I ++Y   G  LG G +G   + ++  TG+  A KK+   ++  ++  D        
Sbjct: 3   SFSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCG 62

Query: 128 ----VRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA 183
                 RE++IM  + KH NI+   + Y + D I LVM++    +L   +  K   TE  
Sbjct: 63  IHFTTLRELKIMNEI-KHENIMGLVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQ 120

Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS----------- 232
              +   IL  + V H+   MHRDL P N            K  DFGL+           
Sbjct: 121 VKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGI---CKIADFGLARRYGYPPYSDT 177

Query: 233 ----IFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAE 286
                  +  E+    V + +Y APE+L     Y   +D+WS G I   LL G P F  E
Sbjct: 178 LSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGE 237

Query: 287 TEEGIAHAIIR--GKIDF-----ERDPWPKVSK------------------------EAK 315
            E       I   G+I         D WP+  K                        +A 
Sbjct: 238 NE-------IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAI 290

Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIKND 344
           +L++++L  NP  R++ +E L++ + K+D
Sbjct: 291 DLLQSLLKLNPLERISAKEALKHEYFKSD 319

Length = 335

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 97.0 bits (241), Expect = 5e-22
 Identities = 70/271 (25%), Positives = 121/271 (44%), Gaps = 25/271 (9%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K +G+G FG          G+ YA K + K+ +    +   +  E  ++    KHP +V 
Sbjct: 1   KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVG 60

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
              +++  + +Y V++   GGELF  +  +  + E  A      I   +   H   +++R
Sbjct: 61  LHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYR 120

Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMAPEVLRRN 259
           DLKPEN L         +   DFGL    K G         FC   G+P Y+APEV+R+ 
Sbjct: 121 DLKPENILL---DSQGHVVLTDFGLC---KEGIAQSDTTTTFC---GTPEYLAPEVIRKQ 171

Query: 260 -YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   +D W  G ++Y +L G+PPF+      +   I+   +       P  S  A  ++
Sbjct: 172 PYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR----PGASLTAWSIL 227

Query: 319 KNMLDPNPYNRL----TLEEVLENPWIKNDN 345
           + +L+ +   RL       E+ E+P+ ++ +
Sbjct: 228 EELLEKDRQRRLGAKEDFLEIQEHPFFESLS 258

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 97.0 bits (242), Expect = 7e-22
 Identities = 80/298 (26%), Positives = 135/298 (45%), Gaps = 46/298 (15%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D+Y     +G G +G     F+ +TG   A KK++    ++ I      RE+ +++H+  
Sbjct: 15  DRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLS-RPFQSAIHAKRTYRELRLLKHM-D 72

Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + ED   +YLV  L  G +L + IV     ++     +   ILR 
Sbjct: 73  HENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADL-NNIVKCQKLSDDHIQFLVYQILRG 130

Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H  G++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 131 LKYIHSAGIIHRDLKPSNIAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 185

Query: 255 VL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----------------TEEGI----- 291
           ++    +Y   +D+WS G I+  LL G   F                    EE +     
Sbjct: 186 IMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISS 245

Query: 292 --AHAIIRG-----KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
             A   I+      K DF ++ +   +  A +L++ ML  +P  R+T  E L +P++ 
Sbjct: 246 ESARNYIQSLPQMPKKDF-KEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLA 302

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 95.9 bits (238), Expect = 1e-21
 Identities = 70/252 (27%), Positives = 117/252 (46%), Gaps = 18/252 (7%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           +GRG +         +  + YA K + KE +  + DID V+ E  +      +P +V   
Sbjct: 3   IGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLH 62

Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDL 208
             ++    ++LV+E   GG+L   +  +    E  A      I   +   HE G+++RDL
Sbjct: 63  SCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDL 122

Query: 209 KPENFLF-ADGSENSQLKAIDFGL-SIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEID 265
           K +N L  ADG     +K  D+G+      PG+      G+P Y+APE+LR   YG  +D
Sbjct: 123 KLDNVLLDADG----HIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVD 178

Query: 266 VWSAGVIIYILLCGVPPF-------WAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            W+ GV+++ ++ G  PF          TE+ +   I+   I   R     +S +A  ++
Sbjct: 179 WWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPR----FLSVKASHVL 234

Query: 319 KNMLDPNPYNRL 330
           K  L+ +P  RL
Sbjct: 235 KGFLNKDPKERL 246

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 94.5 bits (235), Expect = 2e-21
 Identities = 73/250 (29%), Positives = 125/250 (50%), Gaps = 14/250 (5%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN-IVTY 147
           LG+G FG    C    TG+ YACKK+ K++LK     +    E  I+  +  H   IV+ 
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV--HSRFIVSL 58

Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGH----YTERAAAAVGKTILRIVKVCHENGV 203
             A++ K  + LVM +  GG+L   I N       + E  A      I+  ++  H+  +
Sbjct: 59  AYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRI 118

Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYYMAPEVLR-RNYG 261
           ++RDLKPEN L  +   +  ++  D GL++  K G+   +   G+P +MAPE+L+   Y 
Sbjct: 119 IYRDLKPENVLLDN---DGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYD 175

Query: 262 PEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP-KVSKEAKELVKN 320
             +D ++ GV +Y ++    PF A  E+ + +  ++ +I  +   +P K S  +K   + 
Sbjct: 176 FSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRILNDSVTYPDKFSPASKSFCEA 234

Query: 321 MLDPNPYNRL 330
           +L  +P  RL
Sbjct: 235 LLAKDPEKRL 244

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 96.6 bits (240), Expect = 2e-21
 Identities = 76/285 (26%), Positives = 122/285 (42%), Gaps = 55/285 (19%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K LG G FG      +++T   YA K + K+ +     +  V+ E +I+     +  +V 
Sbjct: 7   KTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAE-ADNEWVVK 65

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
              +++DKD +Y VM+   GG++   ++    + E  A      +   ++  H+ G +HR
Sbjct: 66  LYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHR 125

Query: 207 DLKPENFLF-ADGSENSQLKAIDFGL---------SIFFKPG------------------ 238
           D+KP+N L   DG     +K  DFGL         S +++ G                  
Sbjct: 126 DIKPDNILIDLDG----HIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVS 181

Query: 239 ------------------EQFC---EIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYIL 276
                              Q C    +VG+P Y+APEV LR+ Y    D WS GVI++ +
Sbjct: 182 NCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEM 241

Query: 277 LCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNM 321
           L G PPF A T       +I  +      P  K+S EA +L+  +
Sbjct: 242 LVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKL 286

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 95.7 bits (238), Expect = 2e-21
 Identities = 73/273 (26%), Positives = 127/273 (46%), Gaps = 26/273 (9%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           +GRG +         +T   YA K I KE +  + DID V+ E  +      HP +V   
Sbjct: 3   IGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLH 62

Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDL 208
             ++ +  ++ V+E   GG+L   +  +    E  A      I   +   HE G+++RDL
Sbjct: 63  SCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDL 122

Query: 209 KPENFLF-ADGSENSQLKAIDFGL-SIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEID 265
           K +N L  A+G     +K  D+G+     +PG+      G+P Y+APE+LR  +YG  +D
Sbjct: 123 KLDNVLLDAEG----HIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVD 178

Query: 266 VWSAGVIIYILLCGVPPF---------WAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            W+ GV+++ ++ G  PF            TE+ +   I+  +I   R     +S +A  
Sbjct: 179 WWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKASS 234

Query: 317 LVKNMLDPNPYNRL------TLEEVLENPWIKN 343
           ++K  L+ +P  RL         ++  +P+ +N
Sbjct: 235 VLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN 267

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 93.8 bits (233), Expect = 2e-21
 Identities = 72/274 (26%), Positives = 129/274 (47%), Gaps = 21/274 (7%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKI------AKEKLKTEIDIDDVRREVEIM 135
           K+  G  +G G FG  +      +GE  A K++      A  K +    +D + RE+ ++
Sbjct: 1   KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALL 60

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
           + L +H NIV Y  +  D D + + +E   GG +   + N G + E       + IL+ +
Sbjct: 61  KEL-QHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGL 119

Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-------IFFKPGEQFCEIVGSP 248
              H  G++HRD+K  N L  +      +K  DFG+S       +  K       + GS 
Sbjct: 120 NYLHNRGIIHRDIKGANILVDN---KGGIKISDFGISKKLEANSLSTKTNGARPSLQGSV 176

Query: 249 YYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
           ++MAPEV+++  Y  + D+WS G ++  +L G  PF   T+     AI +   +   +  
Sbjct: 177 FWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ---LQAIFKIGENASPEIP 233

Query: 308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
             +S EA + ++   + +   R T  E+L++P++
Sbjct: 234 SNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 95.5 bits (237), Expect = 3e-21
 Identities = 77/276 (27%), Positives = 123/276 (44%), Gaps = 43/276 (15%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D +   K +GRG FG      + +TG  YA K + K  +  +  +  +R E +I+     
Sbjct: 1   DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVE-AD 59

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAA-AVGKTILRIVKVCH 199
              +V    +++DK  +YL+ME   GG++   ++ K   +E A    + +T+L I  + H
Sbjct: 60  GAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAI-H 118

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--------------PGEQFC--- 242
           + G +HRD+KP+N L         +K  DFGL    K              P   F    
Sbjct: 119 QLGFIHRDIKPDNLLL---DAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQN 175

Query: 243 -------------------EIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPP 282
                                VG+P Y+APEV ++  Y    D WS GVI+Y +L G PP
Sbjct: 176 MNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235

Query: 283 FWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
           F +ET +     ++  K      P   +S++AK+L+
Sbjct: 236 FCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLI 271

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 93.5 bits (232), Expect = 3e-21
 Identities = 80/270 (29%), Positives = 134/270 (49%), Gaps = 18/270 (6%)

Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           ELG G FG  ++    ETG   A K I     K+E +++D   E++I+     HPNIV  
Sbjct: 12  ELGDGAFGKVYKAQNKETGVLAAAKVI---DTKSEEELEDYMVEIDILASC-DHPNIVKL 67

Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
            +A+  ++ +++++E C GG +   ++  +   TE     V K  L  +   HEN ++HR
Sbjct: 68  LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHR 127

Query: 207 DLKPENFLFA-DGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR------R 258
           DLK  N LF  DG     +K  DFG+S    +  ++    +G+PY+MAPEV+       R
Sbjct: 128 DLKAGNILFTLDGD----IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 183

Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y  + DVWS G+ +  +    PP        +   I + +      P  + S E K+ +
Sbjct: 184 PYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSEFKDFL 242

Query: 319 KNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
           K  L+ N   R T  ++L++P++  +++ P
Sbjct: 243 KKCLEKNVDARWTTTQLLQHPFVTVNSNKP 272

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 94.7 bits (235), Expect = 4e-21
 Identities = 74/270 (27%), Positives = 118/270 (43%), Gaps = 43/270 (15%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K +GRG FG      + +TG  YA K + K  +  +  +  +R E +I+        +V 
Sbjct: 7   KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVE-ADSLWVVK 65

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAA-AVGKTILRIVKVCHENGVMH 205
              +++DK  +YL+ME   GG++   ++ K   TE      + +T+L I  + H+ G +H
Sbjct: 66  MFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSI-HQLGFIH 124

Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF------------------------ 241
           RD+KP+N L         +K  DFGL    K   +                         
Sbjct: 125 RDIKPDNLLL---DSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRK 181

Query: 242 ------------CEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETE 288
                          VG+P Y+APEV  +  Y    D WS GVI+Y +L G PPF +ET 
Sbjct: 182 AETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETP 241

Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
           +     ++  K      P   +S++AK+L+
Sbjct: 242 QETYKKVMNWKETLIFPPEVPISEKAKDLI 271

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 94.3 bits (235), Expect = 5e-21
 Identities = 85/307 (27%), Positives = 131/307 (42%), Gaps = 56/307 (18%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAK-EK----LKTEIDIDDVRREV 132
           ++  +Y     +G G +G+        TG   A KKI+  E      +T        RE+
Sbjct: 2   DVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRT-------LREI 54

Query: 133 EIMRHLPKHPNIVTYK-----EAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAV 187
           +I+R   KH NI+         ++E  + +Y+V EL E  +L+ +++   H +       
Sbjct: 55  KILRRF-KHENIIGILDIIRPPSFESFNDVYIVQELMET-DLY-KLIKTQHLSNDHIQYF 111

Query: 188 GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE----QFCE 243
              ILR +K  H   V+HRDLKP N L    + N  LK  DFGL+    P         E
Sbjct: 112 LYQILRGLKYIHSANVLHRDLKPSNLLL---NTNCDLKICDFGLARIADPEHDHTGFLTE 168

Query: 244 IVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPF------------------ 283
            V + +Y APE++   + Y   ID+WS G I+  +L   P F                  
Sbjct: 169 YVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGT 228

Query: 284 -WAETEEGI----AHAIIRGKIDFERDPW----PKVSKEAKELVKNMLDPNPYNRLTLEE 334
              E    I    A   I+      + PW    P    +A +L+  ML  NP+ R+T+EE
Sbjct: 229 PSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEE 288

Query: 335 VLENPWI 341
            L +P++
Sbjct: 289 ALAHPYL 295

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 93.5 bits (232), Expect = 7e-21
 Identities = 68/248 (27%), Positives = 123/248 (49%), Gaps = 13/248 (5%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K LG+G FG         T + +A K + K+ +  + D++    E  ++    +HP +  
Sbjct: 1   KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 60

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
               ++ K+ ++ VME   GG+L   I +   +    A      I+  ++  H  G+++R
Sbjct: 61  LYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYR 120

Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCEIVGSPYYMAPEVLR-RNYGPEI 264
           DLK +N L      +  +K  DFG+      G+ + C   G+P Y+APE+L  + Y   +
Sbjct: 121 DLKLDNILL---DTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSV 177

Query: 265 DVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP-WPK-VSKEAKELVKNML 322
           D WS GV++Y +L G  PF    EE +  +I   ++D   +P +P+ +++EAK+++  + 
Sbjct: 178 DWWSFGVLLYEMLIGQSPFHGHDEEELFQSI---RMD---NPCYPRWLTREAKDILVKLF 231

Query: 323 DPNPYNRL 330
              P  RL
Sbjct: 232 VREPERRL 239

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 96.7 bits (240), Expect = 8e-21
 Identities = 96/311 (30%), Positives = 142/311 (45%), Gaps = 47/311 (15%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIA----KEKLKTEIDIDDVRREVEIM 135
           L++Y   K++G G FG         T E +  K I+    KE+ K+++ I     EV +M
Sbjct: 12  LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVI-----EVNVM 66

Query: 136 RHLPKHPNIVTYKEAYEDK--DAIYLVMELCEGGELFDRIVNK-----GHYTERAAAAVG 188
           R L KH NIV Y + + +K    +Y++ME C+ G+L  R + K     G   E A   + 
Sbjct: 67  REL-KHKNIVRYIDRFLNKANQKLYILMEFCDAGDL-SRNIQKCYKMFGKIEEHAIVDIT 124

Query: 189 KTILRIVKVCHE-----NG--VMHRDLKPENFLFADG----------SENSQLKAI---- 227
           + +L  +  CH      NG  V+HRDLKP+N   + G          + N   + I    
Sbjct: 125 RQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIG 184

Query: 228 DFGLSIFFKPGEQFCEIVGSPYYMAPEVL---RRNYGPEIDVWSAGVIIYILLCGVPPFW 284
           DFGLS            VG+PYY +PE+L    ++Y  + D+W+ G IIY L  G  PF 
Sbjct: 185 DFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFH 244

Query: 285 -AETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
            A     +   + RG       P    SKE   L+KN+L+ +   R +  + L    IKN
Sbjct: 245 KANNFSQLISELKRGP----DLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKN 300

Query: 344 DNHAPNVSLGG 354
                  + GG
Sbjct: 301 VGPPVGAAGGG 311

Length = 1021

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 93.2 bits (231), Expect = 1e-20
 Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 9/246 (3%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K +G+G FG           + YA K + K+ +  + +   +  E  ++    KHP +V 
Sbjct: 1   KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 60

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
              +++  D +Y V++   GGELF  +  +  + E  A      I   +   H   +++R
Sbjct: 61  LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 120

Query: 207 DLKPENFLFADGSENSQLKAIDFGL-SIFFKPGEQFCEIVGSPYYMAPEVLRRN-YGPEI 264
           DLKPEN L         +   DFGL     +         G+P Y+APEVL +  Y   +
Sbjct: 121 DLKPENILL---DSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTV 177

Query: 265 DVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDP 324
           D W  G ++Y +L G+PPF++     +   I+   +  +    P ++  A+ L++ +L  
Sbjct: 178 DWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHLLEGLLQK 233

Query: 325 NPYNRL 330
           +   RL
Sbjct: 234 DRTKRL 239

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 92.2 bits (229), Expect = 1e-20
 Identities = 82/299 (27%), Positives = 136/299 (45%), Gaps = 35/299 (11%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           +D+Y   +++G G +G+ ++  +  T ET A KKI  E+    +    +R E+ +++ + 
Sbjct: 1   MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIR-EISLLKEM- 58

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTE--RAAAAVGKTILRIVKV 197
           +H NIV  ++    +  +YLV E  +  +L   + +   + +  R        ILR +  
Sbjct: 59  QHGNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAY 117

Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL 256
           CH + V+HRDLKP+N L  D   N+ LK  DFGL+  F  P   F   V + +Y APE+L
Sbjct: 118 CHSHRVLHRDLKPQNLLI-DRRTNA-LKLADFGLARAFGIPVRTFTHEVVTLWYRAPEIL 175

Query: 257 --RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS--- 311
              R+Y   +D+WS G I   ++   P F  ++E      I R       + WP V+   
Sbjct: 176 LGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLP 235

Query: 312 ----------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
                                     +L+  ML  +P  R+T    LE+ + K+   AP
Sbjct: 236 DYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGDAP 294

Length = 294

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 90.9 bits (225), Expect = 2e-20
 Identities = 78/265 (29%), Positives = 123/265 (46%), Gaps = 23/265 (8%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y   + +G G +G  ++   + TGE  A K I   KL+   D   +++E+ +++   KH 
Sbjct: 11  YELIQRVGSGTYGDVYKARNLHTGELAAVKII---KLEPGDDFSLIQQEIFMVKEC-KHC 66

Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
           NIV Y  +Y  ++ +++ ME C GG L D     G  +E   A V +  L+ +   H  G
Sbjct: 67  NIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKG 126

Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-EQFCEIVGSPYYMAPEV--LRRN 259
            MHRD+K  N L  D   N  +K  DFG++        +    +G+PY+MAPEV  + +N
Sbjct: 127 KMHRDIKGANILLTD---NGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKN 183

Query: 260 --YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK-- 315
             Y    D+W+ G+    L    PP +      +    +  K +F+    PK+  + K  
Sbjct: 184 GGYNQLCDIWAVGITAIELAELQPPMF--DLHPMRALFLMSKSNFQP---PKLKDKTKWS 238

Query: 316 ----ELVKNMLDPNPYNRLTLEEVL 336
                 VK  L  NP  R T E +L
Sbjct: 239 STFHNFVKISLTKNPKKRPTAERLL 263

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 91.6 bits (228), Expect = 2e-20
 Identities = 80/314 (25%), Positives = 127/314 (40%), Gaps = 63/314 (20%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L  Y    +LG G FG  ++  +I+TG   A KKI     K    I  + RE++I++ L 
Sbjct: 7   LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITAL-REIKILKKL- 64

Query: 140 KHPNIVTYKE-AYE-------DKDAIYLVM-----ELCEGGELFDRIVNKGHYTERAAAA 186
           KHPN+V   + A E        + ++Y+V      +L   G L +  V     TE     
Sbjct: 65  KHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLS--GLLENPSV---KLTESQIKC 119

Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQ----- 240
               +L  +   HEN ++HRD+K  N L         LK  DFGL+  +  P        
Sbjct: 120 YMLQLLEGINYLHENHILHRDIKAANILI---DNQGILKIADFGLARPYDGPPPNPKGGG 176

Query: 241 ------FCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIA 292
                 +  +V + +Y  PE+L   R Y   +D+W  G +   +    P    +++    
Sbjct: 177 GGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQL 236

Query: 293 HAIIR--------------------GKIDFERDP------WPKVSKEAKELVKNMLDPNP 326
           H I +                    G   F   P      + K+  E  +L+  +L  +P
Sbjct: 237 HLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDP 296

Query: 327 YNRLTLEEVLENPW 340
           Y RLT  + LE+P+
Sbjct: 297 YKRLTASDALEHPY 310

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 92.2 bits (229), Expect = 2e-20
 Identities = 88/302 (29%), Positives = 131/302 (43%), Gaps = 47/302 (15%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           +Y   + +G+G +G+     +  TGE  A KKI  +  +   D   + RE++++R L +H
Sbjct: 1   RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKI-NDVFEHVSDATRILREIKLLRLL-RH 58

Query: 142 PNIVTYKEAY------EDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
           P+IV  K         E KD IY+V EL E  +L   I      T          +LR +
Sbjct: 59  PDIVEIKHIMLPPSRREFKD-IYVVFELMES-DLHQVIKANDDLTPEHHQFFLYQLLRAL 116

Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFK--PGEQF-CEIVGSPYYM 251
           K  H   V HRDLKP+N L    + + +LK  DFGL+ + F   P   F  + V + +Y 
Sbjct: 117 KYIHTANVFHRDLKPKNIL---ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR 173

Query: 252 APEV---LRRNYGPEIDVWSAGVIIYILLCGVPPF-------------------WAETEE 289
           APE+       Y P ID+WS G I   +L G P F                     ET  
Sbjct: 174 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETIS 233

Query: 290 GIAHAIIRGKIDFER--------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
            + +   R  +   R          +P     A  L++ +L  +P +R T EE L +P+ 
Sbjct: 234 RVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYF 293

Query: 342 KN 343
           K 
Sbjct: 294 KG 295

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 91.8 bits (228), Expect = 3e-20
 Identities = 83/273 (30%), Positives = 136/273 (49%), Gaps = 30/273 (10%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K +GRG FG         TG+ YA K + K ++    +    R E +++ +  +   I  
Sbjct: 7   KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRW-ITN 65

Query: 147 YKEAYEDKDAIYLVMELCEGGELF-------DRIVNKGHYTERAAAAVGKTILRIVKVCH 199
              A++D++ +YLVM+   GG+L        DR+       + A   + + +L I  V H
Sbjct: 66  LHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPE-----DMARFYLAEMVLAIDSV-H 119

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFG--LSIFFKPGEQFCEIVGSPYYMAPEVLR 257
           + G +HRD+KP+N L     +N  ++  DFG  L +      Q    VG+P Y++PE+L+
Sbjct: 120 QLGYVHRDIKPDNVLL---DKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQ 176

Query: 258 R------NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW-PKV 310
                   YGPE D WS GV +Y +L G  PF+AE+       I+  K  F+  P    V
Sbjct: 177 AMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDV 236

Query: 311 SKEAKELVKNMLDPNPYNRL---TLEEVLENPW 340
           S+EAK+L++ ++   P  RL    L++  ++P+
Sbjct: 237 SEEAKDLIRRLICS-PETRLGRNGLQDFKDHPF 268

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 90.8 bits (226), Expect = 5e-20
 Identities = 67/227 (29%), Positives = 106/227 (46%), Gaps = 24/227 (10%)

Query: 82  KYTFGKELGRGEFGITHQCFEIE--TGETYACKKIAKEKLKTE-IDIDDVRREVEIMRHL 138
           KY     +GRG +G  ++        G+ YA KK   +K +   I     R E+ ++R L
Sbjct: 1   KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACR-EIALLREL 59

Query: 139 PKHPNIVTYKEAY-EDKD-AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI-- 194
            KH N+V+  E + E  D ++YL+ +  E  +L+  I  K H   +  +     +  +  
Sbjct: 60  -KHENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQII--KFHRQAKRVSIPPSMVKSLLW 115

Query: 195 -----VKVCHENGVMHRDLKPEN-FLFADGSENSQLKAIDFGLS-IFFKPGEQFCE---I 244
                V   H N V+HRDLKP N  +  +G E   +K  D GL+ +F  P +   +   +
Sbjct: 116 QILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPV 175

Query: 245 VGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEE 289
           V + +Y APE+L   R+Y   ID+W+ G I   LL   P F     +
Sbjct: 176 VVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAK 222

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 92.8 bits (230), Expect = 6e-20
 Identities = 70/216 (32%), Positives = 104/216 (48%), Gaps = 24/216 (11%)

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVN--KGH--YTERAAAAVGKTILRIV 195
            H  IV + + ++  D + L+ME   GG+L  +I    K H  + E     +   I+  +
Sbjct: 123 DHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLAL 182

Query: 196 KVCHENGVMHRDLKPEN-FLFADGSENSQLKAIDFGLS------IFFKPGEQFCEIVGSP 248
              H   +MHRDLK  N FL   G     +K  DFG S      +       FC   G+P
Sbjct: 183 DEVHSRKMMHRDLKSANIFLMPTGI----IKLGDFGFSKQYSDSVSLDVASSFC---GTP 235

Query: 249 YYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
           YY+APE+  R+ Y  + D+WS GVI+Y LL    PF   ++  I   ++ GK     DP+
Sbjct: 236 YYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKY----DPF 291

Query: 308 P-KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           P  VS   K L+  +L  NP  R T +++L   ++K
Sbjct: 292 PCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLK 327

Length = 478

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 89.1 bits (222), Expect = 7e-20
 Identities = 73/269 (27%), Positives = 121/269 (44%), Gaps = 28/269 (10%)

Query: 87  KELGRGEFGITHQC-FEIETGETY--ACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           K+LG G FG  ++   + + G+T   A K + KE   +E +  D  +E  +M+ L  HPN
Sbjct: 1   KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTL-KED-ASEEERKDFLKEARVMKKL-GHPN 57

Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAV--GKTILRIVK-VC-- 198
           +V       +++ +YLV+E  EGG+L D +            +    K +L     +   
Sbjct: 58  VVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKG 117

Query: 199 ----HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP---YYM 251
                    +HRDL   N L     E+  +K  DFGLS      + + +  G      +M
Sbjct: 118 MEYLASKKFVHRDLAARNCLV---GEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWM 174

Query: 252 APEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
           APE L+   +  + DVWS GV+++ I   G  P+   + E +   + +G     R P P+
Sbjct: 175 APESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGY----RLPKPE 230

Query: 310 -VSKEAKELVKNMLDPNPYNRLTLEEVLE 337
               E  EL+ +    +P +R T  E++E
Sbjct: 231 YCPDELYELMLSCWQLDPEDRPTFSELVE 259

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 90.0 bits (223), Expect = 1e-19
 Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 9/204 (4%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K +G+G FG          G  YA K + K+ +  + + + +  E  ++    KHP +V 
Sbjct: 1   KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVG 60

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
              +++  + +Y V++   GGELF  +  +  + E  A      +   +   H   +++R
Sbjct: 61  LHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYR 120

Query: 207 DLKPENFLFADGSENSQLKAI--DFGL-SIFFKPGEQFCEIVGSPYYMAPEVLRRN-YGP 262
           DLKPEN L      +SQ   +  DFGL     +P E      G+P Y+APEVLR+  Y  
Sbjct: 121 DLKPENILL-----DSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDR 175

Query: 263 EIDVWSAGVIIYILLCGVPPFWAE 286
            +D W  G ++Y +L G+PPF++ 
Sbjct: 176 TVDWWCLGAVLYEMLYGLPPFYSR 199

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 89.0 bits (221), Expect = 1e-19
 Identities = 83/296 (28%), Positives = 128/296 (43%), Gaps = 50/296 (16%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD------VRREVEIM 135
           KY   +++G G +G   +    ET E  A K++        +D DD        RE+ ++
Sbjct: 1   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV-------RLDDDDEGVPSSALREICLL 53

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILR 193
           + L KH NIV   +       + LV E C+    + FD     G        +    +L+
Sbjct: 54  KEL-KHKNIVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSC--NGDIDPEIVKSFMFQLLK 110

Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMA 252
            +  CH + V+HRDLKP+N L    ++N +LK  DFGL+  F  P   +   V + +Y  
Sbjct: 111 GLAFCHSHNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVRCYSAEVVTLWYRP 167

Query: 253 PEVL--RRNYGPEIDVWSAGVIIYILL-CGVPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
           P+VL   + Y   ID+WSAG I   L   G P F     +     I R       + WP 
Sbjct: 168 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPG 227

Query: 310 VSK-------------------------EAKELVKNMLDPNPYNRLTLEEVLENPW 340
           VSK                           ++L++N+L  NP  R++ EE L++P+
Sbjct: 228 VSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPY 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 89.8 bits (223), Expect = 2e-19
 Identities = 82/307 (26%), Positives = 128/307 (41%), Gaps = 64/307 (20%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIA---KEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           + LG G  G+     + +  +  A KKI     + +K  +      RE++I+R L  H N
Sbjct: 11  RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHAL------REIKIIRRL-DHDN 63

Query: 144 IVTYKEAYEDK--------------DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGK 189
           IV   E                   +++Y+V E  E       ++ +G  +E  A     
Sbjct: 64  IVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETD--LANVLEQGPLSEEHARLFMY 121

Query: 190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FCEIV 245
            +LR +K  H   V+HRDLKP N      +E+  LK  DFGL+    P         E +
Sbjct: 122 QLLRGLKYIHSANVLHRDLKPANVFI--NTEDLVLKIGDFGLARIVDPHYSHKGYLSEGL 179

Query: 246 GSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------EGIAHAI 295
            + +Y +P +L    NY   ID+W+AG I   +L G P F    E        E +   +
Sbjct: 180 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESV--PV 237

Query: 296 IRGKIDFE--------------------RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEV 335
           +R +   E                    RD  P V+ EA + ++ +L  NP +RLT EE 
Sbjct: 238 VREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEA 297

Query: 336 LENPWIK 342
           L +P++ 
Sbjct: 298 LMHPYMS 304

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 88.7 bits (220), Expect = 2e-19
 Identities = 82/289 (28%), Positives = 130/289 (44%), Gaps = 42/289 (14%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKI---AKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
            +LG G  G   +   I TG   A K +   AK  ++ +I      RE++IM    + P 
Sbjct: 11  SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQI-----LRELQIMHEC-RSPY 64

Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK----VCH 199
           IV++  A+ +++ I + ME  + G L DRI  K          +GK  + +V+    + +
Sbjct: 65  IVSFYGAFLNENNICMCMEFMDCGSL-DRIYKK--GGPIPVEILGKIAVAVVEGLTYLYN 121

Query: 200 ENGVMHRDLKPENFLFADGSENS--QLKAIDFGLSIFFKPGEQFCEI----VGSPYYMAP 253
            + +MHRD+KP N L      NS  Q+K  DFG+S     GE    I    VG+  YM+P
Sbjct: 122 VHRIMHRDIKPSNILV-----NSRGQIKLCDFGVS-----GELINSIADTFVGTSTYMSP 171

Query: 254 EVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF----ERDPWP 308
           E ++   Y  + DVWS G+ I  L  G  PF     +        G +D      ++P P
Sbjct: 172 ERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPP 231

Query: 309 KV-----SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSL 352
           ++      ++ ++ V   L  +P  R T +++   P       A NV L
Sbjct: 232 RLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALRASNVDL 280

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 88.5 bits (220), Expect = 2e-19
 Identities = 78/298 (26%), Positives = 123/298 (41%), Gaps = 68/298 (22%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLK-----TEIDIDDVRREVEIMRHLPKHPN 143
           +G G +G+ ++  +  TGE  A KKI  E        T I      RE+ +++ L  HPN
Sbjct: 7   IGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAI------REISLLKEL-NHPN 59

Query: 144 IVTYKEAYEDKDAIYLV-----------MELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
           IV   +    ++ +YLV           M+      L   ++    Y           +L
Sbjct: 60  IVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQ----------LL 109

Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYM 251
           + +  CH + V+HRDLKP+N L         LK  DFGL+  F  P   +   V + +Y 
Sbjct: 110 QGIAYCHSHRVLHRDLKPQNLLI---DREGALKLADFGLARAFGVPVRTYTHEVVTLWYR 166

Query: 252 APEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR--GKIDFERDPW 307
           APE+L   R Y   +D+WS G I   ++   P F  ++E      I R  G  D   D W
Sbjct: 167 APEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPD--EDVW 224

Query: 308 PKVSK-------------------------EAKELVKNMLDPNPYNRLTLEEVLENPW 340
           P V+                          +  +L+  ML  +P  R++ +  L++P+
Sbjct: 225 PGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPY 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 87.8 bits (217), Expect = 3e-19
 Identities = 72/265 (27%), Positives = 129/265 (48%), Gaps = 20/265 (7%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           +T  + +G+G FG   +  +  T +  A K I  E+   E +I+D+++E+ ++      P
Sbjct: 6   FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQC-DSP 62

Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
            +  Y  +Y     ++++ME   GG   D ++  G + E   A + K IL+ +   H   
Sbjct: 63  YVTKYYGSYLKGTKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEILKGLDYLHSEK 121

Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCEIVGSPYYMAPEVLRRN-Y 260
            +HRD+K  N L    SE   +K  DFG++      + +    VG+P++MAPEV++++ Y
Sbjct: 122 KIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAY 178

Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV----SKEAKE 316
             + D+WS G+    L  G PP          H  +R      ++  P +    SK  KE
Sbjct: 179 DSKADIWSLGITAIELAKGEPP------NSDMHP-MRVLFLIPKNNPPTLTGEFSKPFKE 231

Query: 317 LVKNMLDPNPYNRLTLEEVLENPWI 341
            +   L+ +P  R T +E+L++ +I
Sbjct: 232 FIDACLNKDPSFRPTAKELLKHKFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 87.4 bits (216), Expect = 5e-19
 Identities = 75/268 (27%), Positives = 130/268 (48%), Gaps = 20/268 (7%)

Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           ELG G FG  ++    ETG   A K I   + K+E +++D   E+EI+     HP IV  
Sbjct: 19  ELGDGAFGKVYKAKNKETGALAAAKVI---ETKSEEELEDYMVEIEILATC-NHPYIVKL 74

Query: 148 KEAYEDKDAIYLVMELCEGGELFDRI---VNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
             A+     +++++E C GG + D I   +++G  TE     + + +L  ++  H   ++
Sbjct: 75  LGAFYWDGKLWIMIEFCPGGAV-DAIMLELDRG-LTEPQIQVICRQMLEALQYLHSMKII 132

Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR------ 257
           HRDLK  N L    + +  +K  DFG+S    K  ++    +G+PY+MAPEV+       
Sbjct: 133 HRDLKAGNVLL---TLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKD 189

Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
             Y  + D+WS G+ +  +    PP        +   I + +      P  K S E ++ 
Sbjct: 190 TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQP-SKWSMEFRDF 248

Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           +K  LD +P  R +  ++LE+P++ +  
Sbjct: 249 LKTALDKHPETRPSAAQLLEHPFVSSVT 276

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 86.3 bits (213), Expect = 9e-19
 Identities = 74/265 (27%), Positives = 130/265 (49%), Gaps = 20/265 (7%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           +T  + +G+G FG  ++  +  T E  A K I  E+   E +I+D+++E+ ++      P
Sbjct: 6   FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQC-DSP 62

Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
            I  Y  +Y     ++++ME   GG   D ++  G   E   A + + IL+ +   H   
Sbjct: 63  YITRYYGSYLKGTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSER 121

Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCEIVGSPYYMAPEVLRRN-Y 260
            +HRD+K  N L    SE   +K  DFG++      + +    VG+P++MAPEV++++ Y
Sbjct: 122 KIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 178

Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV----SKEAKE 316
             + D+WS G+    L  G PP          H  +R      ++  P +    SK  KE
Sbjct: 179 DFKADIWSLGITAIELAKGEPPN------SDLHP-MRVLFLIPKNSPPTLEGQYSKPFKE 231

Query: 317 LVKNMLDPNPYNRLTLEEVLENPWI 341
            V+  L+ +P  R T +E+L++ +I
Sbjct: 232 FVEACLNKDPRFRPTAKELLKHKFI 256

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 86.4 bits (214), Expect = 1e-18
 Identities = 72/285 (25%), Positives = 125/285 (43%), Gaps = 38/285 (13%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 6   EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 61

Query: 145 VTYKEAYEDKDAIYLVME-LCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGV 203
           V   +    ++ +YLV E L +  + F               +    +L+ +  CH + V
Sbjct: 62  VKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRV 121

Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--RNY 260
           +HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   + Y
Sbjct: 122 LHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 178

Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS--------- 311
              +D+WS G I   ++     F  ++E      I R     +   WP V+         
Sbjct: 179 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSF 238

Query: 312 ----------------KEAKELVKNMLDPNPYNRLTLEEVLENPW 340
                           ++ ++L+  ML  +P  R++ +  L +P+
Sbjct: 239 PKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPF 283

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 86.3 bits (213), Expect = 1e-18
 Identities = 70/261 (26%), Positives = 128/261 (49%), Gaps = 12/261 (4%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           +T  +++G+G FG   +  +  T +  A K I  E+   E +I+D+++E+ ++      P
Sbjct: 6   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQC-DSP 62

Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
            +  Y  +Y     ++++ME   GG   D ++  G   E   A + + IL+ +   H   
Sbjct: 63  YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEK 121

Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCEIVGSPYYMAPEVLRRN-Y 260
            +HRD+K  N L    SE+ ++K  DFG++      + +    VG+P++MAPEV++++ Y
Sbjct: 122 KIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 178

Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
             + D+WS G+    L  G PP        +   I +         +   SK  KE V+ 
Sbjct: 179 DSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNY---SKPLKEFVEA 235

Query: 321 MLDPNPYNRLTLEEVLENPWI 341
            L+  P  R T +E+L++ +I
Sbjct: 236 CLNKEPSFRPTAKELLKHKFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 86.0 bits (213), Expect = 1e-18
 Identities = 77/302 (25%), Positives = 129/302 (42%), Gaps = 51/302 (16%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD------VRREVEI 134
           D Y   +++G G +G  ++  +  TG+  A KK       T +++D+        RE+ +
Sbjct: 1   DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKK-------TRLEMDEEGIPPTALREISL 53

Query: 135 MRHLPKHPNIV-----TYKEAYEDKDAIYLVME-LCEGGELFDRIVNKGHYTERAAAAVG 188
           ++ L +   IV      + E    K ++YLV E L    + F     +G      A  + 
Sbjct: 54  LQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIK 113

Query: 189 KTILRIVK---VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEI 244
             + +++K    CH++GVMHRDLKP+N L     +   LK  D GL   F  P + +   
Sbjct: 114 SFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK--QKGLLKIADLGLGRAFSIPVKSYTHE 171

Query: 245 VGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF 302
           + + +Y APEVL    +Y   +D+WS G I   +    P F  ++E      I +     
Sbjct: 172 IVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTP 231

Query: 303 ERDPWPKVSK------------------------EAKELVKNMLDPNPYNRLTLEEVLEN 338
               WP VSK                        E  +L++ ML  +P  R++ +  L +
Sbjct: 232 TEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291

Query: 339 PW 340
           P+
Sbjct: 292 PY 293

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 85.2 bits (211), Expect = 2e-18
 Identities = 73/289 (25%), Positives = 128/289 (44%), Gaps = 35/289 (12%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
            YT  +++G G +G+ ++    +TG+  A KKI  E  +  +    +R E+ +++ L +H
Sbjct: 1   DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIR-EISLLKEL-QH 58

Query: 142 PNIVTYKEAYEDKDAIYLVMEL--CEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           PNIV  ++    +  +YL+ E    +  +  D +    +       +    IL+ +  CH
Sbjct: 59  PNIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH 118

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL-- 256
              V+HRDLKP+N L  +      +K  DFGL+  F  P   +   V + +Y APEVL  
Sbjct: 119 SRRVLHRDLKPQNLLIDN---KGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLG 175

Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS----- 311
              Y   +D+WS G I   +    P F  ++E      I R       D WP V+     
Sbjct: 176 SPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDY 235

Query: 312 --------------------KEAKELVKNMLDPNPYNRLTLEEVLENPW 340
                               ++  +L++ ML  +P  R++ ++ L +P+
Sbjct: 236 KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPY 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 85.4 bits (211), Expect = 4e-18
 Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 32/261 (12%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D +   K +GRG FG         T   YA K + K ++    +    R E  ++ +   
Sbjct: 1   DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVN-GD 59

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELF-------DRIVNKGHYTERAAAAVGKTILR 193
              I T   A++D++ +YLVM+   GG+L        DR+       + A   + + +L 
Sbjct: 60  CQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPE-----DMARFYIAEMVLA 114

Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG--LSIFFKPGEQFCEIVGSPYYM 251
           I  + H+   +HRD+KP+N L      N  ++  DFG  L +      Q    VG+P Y+
Sbjct: 115 IHSI-HQLHYVHRDIKPDNVLL---DMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYI 170

Query: 252 APEVLRR------NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD 305
           +PE+L+        YGPE D WS GV +Y +L G  PF+AE+       I+  +   ER 
Sbjct: 171 SPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHE---ERF 227

Query: 306 PWPK----VSKEAKELVKNML 322
            +P     VS+EAK+L++ ++
Sbjct: 228 QFPSHITDVSEEAKDLIQRLI 248

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 84.6 bits (209), Expect = 4e-18
 Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 24/269 (8%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH---PNIV 145
           +GRG FG  + C + +TG+ YA K + K+++K +        E  IM  L      P IV
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNE-RIMLSLVSTGDCPFIV 60

Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMH 205
               A+   D +  +++L  GG+L   +   G ++E         I+  ++  H   V++
Sbjct: 61  CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVY 120

Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFF---KPGEQFCEIVGSPYYMAPEVLRRN--Y 260
           RDLKP N L     E+  ++  D GL+  F   KP       VG+  YMAPEVL++   Y
Sbjct: 121 RDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS----VGTHGYMAPEVLQKGVAY 173

Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP-KVSKEAKELVK 319
               D +S G +++ LL G  PF     +   H I R  +    +  P   S E + L++
Sbjct: 174 DSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTLTMAVE-LPDSFSPELRSLLE 231

Query: 320 NMLDPNPYNRLTL-----EEVLENPWIKN 343
            +L  +   RL       +EV E+P+ ++
Sbjct: 232 GLLQRDVNRRLGCLGRGAQEVKEHPFFRS 260

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 84.5 bits (209), Expect = 1e-17
 Identities = 82/318 (25%), Positives = 122/318 (38%), Gaps = 53/318 (16%)

Query: 42  PSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCF 101
           P  S    S S  AS               S P+    L +      +G G  G  ++  
Sbjct: 49  PPSSSSSSSSSSSASG--------------SAPSAAKSLSELERVNRIGSGAGGTVYKVI 94

Query: 102 EIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMRHLPKHPNIVTYKEAYEDKDAI 157
              TG  YA K I           D VR    RE+EI+R +  HPN+V   + ++    I
Sbjct: 95  HRPTGRLYALKVIYGNH------EDTVRRQICREIEILRDV-NHPNVVKCHDMFDHNGEI 147

Query: 158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFAD 217
            +++E  +GG L    +      E+  A V + IL  +   H   ++HRD+KP N L   
Sbjct: 148 QVLLEFMDGGSLEGTHIAD----EQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINS 203

Query: 218 GSENSQLKAIDFGLSIFFKPGEQFC-EIVGSPYYMAPEVLRRNY------GPEIDVWSAG 270
                 +K  DFG+S         C   VG+  YM+PE +  +       G   D+WS G
Sbjct: 204 A---KNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLG 260

Query: 271 VIIYILLCGVPPF-------WAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD 323
           V I     G  PF       WA     I  +           P    S+E +  +   L 
Sbjct: 261 VSILEFYLGRFPFGVGRQGDWASLMCAICMS------QPPEAP-ATASREFRHFISCCLQ 313

Query: 324 PNPYNRLTLEEVLENPWI 341
             P  R +  ++L++P+I
Sbjct: 314 REPAKRWSAMQLLQHPFI 331

Length = 353

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 85.7 bits (212), Expect = 1e-17
 Identities = 82/281 (29%), Positives = 126/281 (44%), Gaps = 32/281 (11%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           KY   + LG G  G       +  GE +A K +  E + +E D +  + EV  + +    
Sbjct: 33  KYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNC-DF 90

Query: 142 PNIVTYKEAYEDKDA--------IYLVMELCEGGELFDRIVNKGH----YTERAAAAVGK 189
            +IV   E +  KD         I LV++    G+L   I ++      + E  A  +  
Sbjct: 91  FSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFI 150

Query: 190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP------GEQFCE 243
            +L  V   H   ++HRD+K  N L      N  +K  DFG S  +        G  FC 
Sbjct: 151 QVLLAVHHVHSKHMIHRDIKSANILLC---SNGLVKLGDFGFSKMYAATVSDDVGRTFC- 206

Query: 244 IVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF 302
             G+PYY+APE+ RR  Y  + D++S GV++Y LL    PF  E  E + H  + G+   
Sbjct: 207 --GTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRY-- 262

Query: 303 ERDPWP-KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
             DP P  +S E +E+V  +L  +P  R +  ++L  P  K
Sbjct: 263 --DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICK 301

Length = 496

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 82.8 bits (204), Expect = 2e-17
 Identities = 77/284 (27%), Positives = 125/284 (44%), Gaps = 38/284 (13%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD-VRREVEIMRHLP 139
           D +   + +G+G +G   +    + G      K A + L    DID+ +  E  I++ L 
Sbjct: 18  DTWEIIETIGKGTYGKVFKVLNKKNGS-----KAAVKILDPIHDIDEEIEAEYNILKALS 72

Query: 140 KHPNIVT-----YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
            HPN+V      YK+  ++ D ++LV+ELC GG + D +       ER    +   IL  
Sbjct: 73  DHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHE 132

Query: 195 ----VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCEIVGSPY 249
               ++  H N  +HRD+K  N L         +K +DFG+S        +    VG+P+
Sbjct: 133 ALMGLQHLHVNKTIHRDVKGNNILLTTE---GGVKLVDFGVSAQLTSTRLRRNTSVGTPF 189

Query: 250 YMAPEV------LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE 303
           +MAPEV      L   Y    DVWS G+    L  G PP  A+         +R      
Sbjct: 190 WMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPL-ADLHP------MRALFKIP 242

Query: 304 RDPWPKV------SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           R+P P +      S E  + ++  L  +   R T+ ++L++ +I
Sbjct: 243 RNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 83.6 bits (206), Expect = 2e-17
 Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 17/207 (8%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 17  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 74

Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L   G   + IV     T+     +   ILR 
Sbjct: 75  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 132

Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 133 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 187

Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 188 IMLNWMHYNQTVDIWSVGCIMAELLTG 214

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 82.4 bits (203), Expect = 2e-17
 Identities = 70/247 (28%), Positives = 116/247 (46%), Gaps = 11/247 (4%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH---PNIV 145
           +GRG FG  + C + +TG+ YA K + K+++K +   + +     IM  L      P IV
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLVSTGDCPFIV 60

Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMH 205
               A+   D +  +++L  GG+L   +   G ++E+        I+  ++  H   V++
Sbjct: 61  CMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVY 120

Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRN--YGPE 263
           RDLKP N L     E+  ++  D GL+  F   +     VG+  YMAPEVL++   Y   
Sbjct: 121 RDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGTAYDSS 176

Query: 264 IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD 323
            D +S G +++ LL G  PF     +   H I R  +    +     S E K L++ +L 
Sbjct: 177 ADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTLTVNVELPDSFSPELKSLLEGLLQ 235

Query: 324 PNPYNRL 330
            +   RL
Sbjct: 236 RDVSKRL 242

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 82.8 bits (204), Expect = 3e-17
 Identities = 71/249 (28%), Positives = 120/249 (48%), Gaps = 20/249 (8%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K +GRG FG           + +A K + K ++    +    R E +++ +   +  I T
Sbjct: 7   KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDNQWITT 65

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMH 205
              A++D++ +YLVM+   GG+L   +   +    E  A      ++  +   H+   +H
Sbjct: 66  LHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVH 125

Query: 206 RDLKPENFLFADGSENSQLKAIDFG--LSIFFKPGEQFCEIVGSPYYMAPEVL------R 257
           RD+KP+N L      N  ++  DFG  L +      Q    VG+P Y++PE+L      +
Sbjct: 126 RDIKPDNILM---DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGK 182

Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP----KVSKE 313
             YGPE D WS GV +Y +L G  PF+AE+       I+  K   ER  +P     VS++
Sbjct: 183 GKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK---ERFQFPAQVTDVSED 239

Query: 314 AKELVKNML 322
           AK+L++ ++
Sbjct: 240 AKDLIRRLI 248

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 81.6 bits (201), Expect = 4e-17
 Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 44/288 (15%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVE----IMR 136
           D +   + +G+G +G  ++    + G   A K +          I DV  E+E    I++
Sbjct: 22  DTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDP--------ISDVDEEIEAEYNILQ 73

Query: 137 HLPKHPNIVTYKEAYEDKD-----AIYLVMELCEGG---ELFDRIVNKGHYTERAAAA-V 187
            LP HPN+V +   +   D      ++LV+ELC GG   EL   ++  G   + A  + +
Sbjct: 74  SLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYI 133

Query: 188 GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCEIVG 246
               L  ++  H N ++HRD+K  N L    +    +K +DFG+S        +    VG
Sbjct: 134 LYGALLGLQHLHNNRIIHRDVKGNNILL---TTEGGVKLVDFGVSAQLTSTRLRRNTSVG 190

Query: 247 SPYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI 300
           +P++MAPEV+        +Y    DVWS G+    L  G PP +        H  ++   
Sbjct: 191 TPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFD------MHP-VKTLF 243

Query: 301 DFERDPWP------KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
              R+P P      K  +     +   L  +   R ++  +LE+P+IK
Sbjct: 244 KIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 79.5 bits (197), Expect = 2e-16
 Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 53/260 (20%)

Query: 105 TGETYACKKIAKEKLKTEIDIDDVRREVEIMRH--LPKHPNIVTYKEAYEDKDAIYLVME 162
           T + +  K I  +              +E M H  +  +PN +    +        L+M+
Sbjct: 40  TQKLFVQKIIKAKNF----------NAIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMD 89

Query: 163 LCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC------HENGVMHRDLKPENFLFA 216
             + G+LFD +  +G  +E       +    I ++       H++ ++H D+K EN L+ 
Sbjct: 90  YIKDGDLFDLLKKEGKLSEA------EVKKIIRQLVEALNDLHKHNIIHNDIKLENVLY- 142

Query: 217 DGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY-------YMAPE-VLRRNYGPEIDVWS 268
           D +++ ++   D+GL          C+I+G+P        Y +PE +   NY    D W+
Sbjct: 143 DRAKD-RIYLCDYGL----------CKIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWA 191

Query: 269 AGVIIYILLCGVPPFWAETEEGIA----HAIIRGKIDFERDPWPKVSKEAKELVKNMLDP 324
            GV+ Y LL G  PF  + +E +         + K+ F +     VSK A + V++ML  
Sbjct: 192 VGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIK----NVSKNANDFVQSMLKY 247

Query: 325 NPYNRL-TLEEVLENPWIKN 343
           N   RL    E++++P++K 
Sbjct: 248 NINYRLTNYNEIIKHPFLKI 267

Length = 267

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 79.4 bits (196), Expect = 3e-16
 Identities = 82/315 (26%), Positives = 130/315 (41%), Gaps = 54/315 (17%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
            ELG G  G+  +     +G   A K I  E +K  I  + + RE++++ H    P IV 
Sbjct: 7   GELGAGNGGVVTKVLHRPSGLIMARKLIHLE-IKPAIR-NQIIRELKVL-HECNSPYIVG 63

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHEN-GVM 204
           +  A+     I + ME  +GG L D+++ K G   E     +   +LR +    E   +M
Sbjct: 64  FYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIM 122

Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI----VGSPYYMAPEVLRRN- 259
           HRD+KP N L    +   ++K  DFG+S     G+    +    VG+  YM+PE L+   
Sbjct: 123 HRDVKPSNILV---NSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTH 174

Query: 260 YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIA-----------------------HAII 296
           Y  + D+WS G+ +  +  G  P      + +                            
Sbjct: 175 YTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSP 234

Query: 297 RGKIDFE------RDPWPKV-----SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           R    FE       +P PK+     S E ++ V   L  NP  R  L+E+ ++P+IK   
Sbjct: 235 RPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAE 294

Query: 346 HAPNVSLGGNVTSRI 360
               V   G V S +
Sbjct: 295 L-EEVDFAGWVCSTM 308

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 78.9 bits (194), Expect = 4e-16
 Identities = 69/240 (28%), Positives = 108/240 (45%), Gaps = 19/240 (7%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK----TEIDIDDVRREVEIM 135
           L+ Y    +LG G +    +     T    A K+I  E  +    T I      REV ++
Sbjct: 4   LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAI------REVSLL 57

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGK-TILRI 194
           ++L KH NIVT  +    +  + LV E  +  +L   + N G+        +    +LR 
Sbjct: 58  KNL-KHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRG 115

Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAP 253
           +  CH+  ++HRDLKP+N L    +E  +LK  DFGL+     P + +   V + +Y  P
Sbjct: 116 LSYCHKRKILHRDLKPQNLLI---NEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPP 172

Query: 254 EVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
           +VL     Y   ID+W  G I+Y +  G P F   T +   H I R       + WP ++
Sbjct: 173 DVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGIT 232

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 79.2 bits (195), Expect = 5e-16
 Identities = 79/295 (26%), Positives = 137/295 (46%), Gaps = 47/295 (15%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           +YT  K++G G +G      +  TGE  A KK+++   ++EI      RE+ +++H+ +H
Sbjct: 16  RYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSR-PFQSEIFAKRAYRELTLLKHM-QH 73

Query: 142 PNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
            N++      T   + ++    YLVM   +      +I+     +E     +   +L  +
Sbjct: 74  ENVIGLLDVFTSAVSGDEFQDFYLVMPYMQTD--LQKIMGH-PLSEDKVQYLVYQMLCGL 130

Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
           K  H  G++HRDLKP N      +E+ +LK +DFGL+       +    V + +Y APEV
Sbjct: 131 KYIHSAGIIHRDLKPGNLAV---NEDCELKILDFGLA--RHADAEMTGYVVTRWYRAPEV 185

Query: 256 LRR--NYGPEIDVWSAGVIIYILLCGV-----------------------PPFWAETEEG 290
           +    +Y   +D+WS G I+  +L G                        P F  + E+ 
Sbjct: 186 ILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDK 245

Query: 291 IAHAIIRG-----KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
            A + I+      + DF    +PK S +A +L++ ML+ +   RLT  E LE+P+
Sbjct: 246 AAKSYIKSLPKYPRKDFST-LFPKASPQAVDLLEKMLELDVDKRLTATEALEHPY 299

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 77.5 bits (191), Expect = 6e-16
 Identities = 66/266 (24%), Positives = 114/266 (42%), Gaps = 29/266 (10%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIA----KEKLKTEIDIDDVRREVEIMRHLP 139
           TF KELG G+FG+ H       G+      +A    +E   +E   DD   E ++M  L 
Sbjct: 7   TFLKELGSGQFGVVH------LGKWRGKIDVAIKMIREGAMSE---DDFIEEAKVMMKL- 56

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVC 198
            HPN+V        +  I++V E    G L + +   KG         +   +   ++  
Sbjct: 57  SHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYL 116

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEV 255
             NG +HRDL   N L   G +N  +K  DFGL+ +    +Q+    G+ +   +  PEV
Sbjct: 117 ESNGFIHRDLAARNCLV--GEDNV-VKVSDFGLARYVL-DDQYTSSQGTKFPVKWAPPEV 172

Query: 256 LRRN-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV-SK 312
              + +  + DVWS GV+++ +   G  P+   +   +  ++  G     R   PK+   
Sbjct: 173 FDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGY----RLYRPKLAPT 228

Query: 313 EAKELVKNMLDPNPYNRLTLEEVLEN 338
           E   ++ +     P +R   +++L  
Sbjct: 229 EVYTIMYSCWHEKPEDRPAFKKLLSQ 254

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 77.7 bits (191), Expect = 1e-15
 Identities = 59/186 (31%), Positives = 88/186 (47%), Gaps = 9/186 (4%)

Query: 130 REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVG- 188
           REV +++ L KH NIVT  +      ++ LV E  +  +L   + + G+        +  
Sbjct: 53  REVSLLKDL-KHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFL 110

Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGS 247
             ILR +  CH   V+HRDLKP+N L    +E  +LK  DFGL+     P + +   V +
Sbjct: 111 YQILRGLAYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSVPTKTYSNEVVT 167

Query: 248 PYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD 305
            +Y  P+VL     Y  +ID+W  G I + +  G P F   T E   H I R       +
Sbjct: 168 LWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEE 227

Query: 306 PWPKVS 311
            WP +S
Sbjct: 228 TWPGIS 233

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 77.8 bits (191), Expect = 2e-15
 Identities = 54/199 (27%), Positives = 100/199 (50%), Gaps = 17/199 (8%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV--- 145
           +G G +G     ++    +  A KK+++   ++ I      RE+ +++H+ KH N++   
Sbjct: 23  VGSGAYGSVCSAYDTRLRQKVAVKKLSR-PFQSLIHARRTYRELRLLKHM-KHENVIGLL 80

Query: 146 ---TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
              T   + E+ + +YLV  L   G   + IV     ++     +   +LR +K  H  G
Sbjct: 81  DVFTPATSIENFNEVYLVTNLM--GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAG 138

Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR--NY 260
           ++HRDLKP N      +E+ +L+ +DFGL+   +  ++    V + +Y APE++    +Y
Sbjct: 139 IIHRDLKPSNVAV---NEDCELRILDFGLA--RQADDEMTGYVATRWYRAPEIMLNWMHY 193

Query: 261 GPEIDVWSAGVIIYILLCG 279
              +D+WS G I+  LL G
Sbjct: 194 NQTVDIWSVGCIMAELLKG 212

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 76.9 bits (189), Expect = 2e-15
 Identities = 76/293 (25%), Positives = 126/293 (43%), Gaps = 50/293 (17%)

Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK--HPNIV 145
           E+G G +G  ++  +  +G   A K +  +  +  + +  VR EV +++ L    HPNIV
Sbjct: 7   EIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVR-EVALLKRLEAFDHPNIV 65

Query: 146 TYKE----AYEDKDA-IYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
              +    +  D++  + LV E  +       D++   G   E     + +  LR +   
Sbjct: 66  RLMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLM-RQFLRGLDFL 124

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV-LR 257
           H N ++HRDLKPEN L   G    Q+K  DFGL+  +        +V + +Y APEV L+
Sbjct: 125 HANCIVHRDLKPENILVTSG---GQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQ 181

Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE------RDPW---- 307
             Y   +D+WS G I   +    P F   +E     A   GKI F+       D W    
Sbjct: 182 STYATPVDMWSVGCIFAEMFRRKPLFCGNSE-----ADQLGKI-FDLIGLPPEDDWPRDV 235

Query: 308 -------------------PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
                              P++ +   +L+  ML  NP+ R++    L++P+ 
Sbjct: 236 TLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 76.7 bits (189), Expect = 2e-15
 Identities = 80/308 (25%), Positives = 121/308 (39%), Gaps = 68/308 (22%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK----TEIDIDDVRREVEIM 135
           L+ Y    +LG G +   ++     TG+  A K+I  E  +    T I      RE  ++
Sbjct: 4   LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAI------REASLL 57

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKT----- 190
           + L KH NIVT  +    K  + LV E  +         +   Y +     +        
Sbjct: 58  KDL-KHANIVTLHDIIHTKKTLTLVFEYLD--------TDLKQYMDDCGGGLSMHNVRLF 108

Query: 191 ---ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL----SIFFKPGEQFCE 243
              +LR +  CH+  V+HRDLKP+N L    SE  +LK  DFGL    S+   P + +  
Sbjct: 109 LFQLLRGLAYCHQRRVLHRDLKPQNLLI---SERGELKLADFGLARAKSV---PSKTYSN 162

Query: 244 IVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAIIRGKI 300
            V + +Y  P+VL     Y   +D+W  G I Y +  G P F   T+ E   H I R   
Sbjct: 163 EVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLG 222

Query: 301 DFERDPWPKVSK----------------------------EAKELVKNMLDPNPYNRLTL 332
               + WP VS                               +EL    L   P  R++ 
Sbjct: 223 TPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISA 282

Query: 333 EEVLENPW 340
            E +++P+
Sbjct: 283 AEAMKHPY 290

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 76.8 bits (189), Expect = 4e-15
 Identities = 75/303 (24%), Positives = 122/303 (40%), Gaps = 74/303 (24%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K +G+G FG      + +TG+ YA K + K ++  +  +  V+ E +++      P +V+
Sbjct: 7   KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAE-SDSPWVVS 65

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAA-AVGKTILRIVKVCHENGVMH 205
              +++D   +YL+ME   GG+L   ++    ++E      + + +L I  V H+ G +H
Sbjct: 66  LYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAV-HKLGFIH 124

Query: 206 RDLKPENFLF-ADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP----------- 253
           RD+KP+N L    G     +K  DFGLS  F           S YY              
Sbjct: 125 RDIKPDNILIDRGG----HIKLSDFGLSTGFHKQHD------SAYYQKLLQGKSNKNRID 174

Query: 254 --------------------EVLRRN--------------YGPEI----------DVWSA 269
                                  ++N                PEI          D WS 
Sbjct: 175 NRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234

Query: 270 GVIIYILLCGVPPFWAETEEGIAHAII--RGKIDFERDPWPKVSKEAKELVKNMLDPNPY 327
           G I++  L G PPF +E        II  R  + F  D    +S EA++L++ ++  N  
Sbjct: 235 GAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDD--IHLSVEAEDLIRRLIT-NAE 291

Query: 328 NRL 330
           NRL
Sbjct: 292 NRL 294

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|185503 PTZ00183, PTZ00183, centrin; Provisional

 Score = 72.4 bits (178), Expect = 5e-15
 Identities = 44/145 (30%), Positives = 80/145 (55%), Gaps = 4/145 (2%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L +DQ  +I++ F + DTD +G +  +ELK  +  +G +    ++K ++   D DG+G +
Sbjct: 11  LTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKI 70

Query: 441 SCDEFV-TMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-GDQTI 498
             +EF+  M+  L      + + +AFR FD +++G I +  LK V  E   G    D+ +
Sbjct: 71  DFEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKE--LGETITDEEL 128

Query: 499 RDILRDVDLDRDGRISFEEFKAMMT 523
           ++++ + D + DG IS EEF  +M 
Sbjct: 129 QEMIDEADRNGDGEISEEEFYRIMK 153

Length = 158

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 75.8 bits (186), Expect = 8e-15
 Identities = 70/295 (23%), Positives = 129/295 (43%), Gaps = 44/295 (14%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D+Y   K++G G +G      +  TG   A KK+ +   ++E+      RE+ +++H+ K
Sbjct: 15  DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYR-PFQSELFAKRAYRELRLLKHM-K 72

Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + +     YLVM     G    +++     +E     +   +L+ 
Sbjct: 73  HENVIGLLDVFTPDLSLDRFHDFYLVMPFM--GTDLGKLMKHEKLSEDRIQFLVYQMLKG 130

Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H  G++HRDLKP N      +E+ +LK +DFGL+   +   +    V + +Y APE
Sbjct: 131 LKYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGLA--RQTDSEMTGYVVTRWYRAPE 185

Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCGVP-----------------------PFWAETEE 289
           V+    +Y   +D+WS G I+  +L G P                        F  + + 
Sbjct: 186 VILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQS 245

Query: 290 GIAHAIIRGKIDFERDPW----PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
             A   ++    F +  +    P  +  A  +++ ML  +  +R+T  E L +P+
Sbjct: 246 EDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPY 300

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 77.6 bits (191), Expect = 8e-15
 Identities = 60/242 (24%), Positives = 100/242 (41%), Gaps = 25/242 (10%)

Query: 104 ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA-IYLVME 162
            TG   A K +  +  + E      RRE  +   L  HPNIV   ++ E     ++ V E
Sbjct: 1   MTGHEVAIKLLRTDAPEEEHQRARFRRETALCARL-YHPNIVALLDSGEAPPGLLFAVFE 59

Query: 163 LCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV---CHENGVMHRDLKPENFLFADGS 219
              G  L + +   G      A   G+ +L+++      H  G++HRDLKP+N + +   
Sbjct: 60  YVPGRTLREVLAADGAL---PAGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVSQTG 116

Query: 220 ENSQLKAIDFGLSIFFKPGEQFC---------EIVGSPYYMAPEVLR-RNYGPEIDVWSA 269
                K +DFG+     PG +           E++G+P Y APE LR     P  D+++ 
Sbjct: 117 VRPHAKVLDFGIGTLL-PGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAW 175

Query: 270 GVIIYILLCGVPPFWAETEEGIAHAIIR--GKIDFERDPWPKVSKEAKELVKNMLDPNPY 327
           G+I    L G           +A  + +    +D    PW        ++++  L+ +P 
Sbjct: 176 GLIFLECLTGQR---VVQGASVAEILYQQLSPVDVSLPPWIA-GHPLGQVLRKALNKDPR 231

Query: 328 NR 329
            R
Sbjct: 232 QR 233

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 74.7 bits (183), Expect = 1e-14
 Identities = 82/297 (27%), Positives = 125/297 (42%), Gaps = 42/297 (14%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK----TEIDIDDVRREVEIM 135
           L+ Y    +LG G +   ++     T    A K+I  E  +    T I      REV ++
Sbjct: 5   LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAI------REVSLL 58

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILR 193
           + L KH NIVT  +    + ++ LV E  +    +  D   N  +            +LR
Sbjct: 59  KDL-KHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNSINM--HNVKLFLFQLLR 115

Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL----SIFFKPGEQFCEIVGSPY 249
            +  CH   V+HRDLKP+N L    +E  +LK  DFGL    SI   P + +   V + +
Sbjct: 116 GLNYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSI---PTKTYSNEVVTLW 169

Query: 250 YMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
           Y  P++L    +Y  +ID+W  G I Y +  G P F   T E   H I R       + W
Sbjct: 170 YRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETW 229

Query: 308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNV-SLGGNVTSRIKQF 363
           P +    +    N      Y +   + +         NHAP + S G  + S++ QF
Sbjct: 230 PGILSNEEFKSYN------YPKYRADCLH--------NHAPRLDSDGAELLSKLLQF 272

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 73.8 bits (181), Expect = 1e-14
 Identities = 54/199 (27%), Positives = 93/199 (46%), Gaps = 15/199 (7%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
            + T  +E+G G+FG+    + +E  +  A K I +E   +E   +D   E ++M  L  
Sbjct: 4   SELTLVQEIGSGQFGLVWLGYWLEKRKV-AIKTI-REGAMSE---EDFIEEAQVMMKL-S 57

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCH 199
           HP +V       ++  I LV E  E G L D +   +G +++     +   +   +    
Sbjct: 58  HPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLE 117

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVL 256
            + V+HRDL   N L     EN  +K  DFG++ F    +Q+    G+ +   + +PEV 
Sbjct: 118 SSNVIHRDLAARNCLV---GENQVVKVSDFGMTRFVL-DDQYTSSTGTKFPVKWSSPEVF 173

Query: 257 R-RNYGPEIDVWSAGVIIY 274
               Y  + DVWS GV+++
Sbjct: 174 SFSKYSSKSDVWSFGVLMW 192

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein

 Score = 73.9 bits (182), Expect = 2e-14
 Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 30/220 (13%)

Query: 84  TFGKELGRGEFGIT------HQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
                +G+    +       H+     T    A KKI  +    E D+  +++E+   R 
Sbjct: 1   ELLTLIGKCFEDLMIVHLAKHKP----TNTLVAVKKINLDSCSKE-DLKLLQQEIITSRQ 55

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYT----ERAAAAVGKTILR 193
           L +HPNI+ Y  ++     +Y+V  L   G   D +  K H+     E A A + K +L 
Sbjct: 56  L-QHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL--KTHFPEGLPELAIAFILKDVLN 112

Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP----- 248
            +   H  G +HR +K  + L   G     L  + + +S   K G++   +   P     
Sbjct: 113 ALDYIHSKGFIHRSVKASHILL-SGDGKVVLSGLRYSVS-MIKHGKRQRVVHDFPKSSVK 170

Query: 249 --YYMAPEVLRRN---YGPEIDVWSAGVIIYILLCGVPPF 283
              +++PEVL++N   Y  + D++S G+    L  G  PF
Sbjct: 171 NLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPF 210

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 67.6 bits (166), Expect = 2e-14
 Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 1/63 (1%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
           L +AFR FDK+  G I  DELK  L     G + ++ I +++R+VD D DG+I FEEF  
Sbjct: 2   LREAFRLFDKDGDGTISADELKAALKSLGEGLS-EEEIDEMIREVDKDGDGKIDFEEFLE 60

Query: 521 MMT 523
           +M 
Sbjct: 61  LMA 63

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 73.5 bits (180), Expect = 2e-14
 Identities = 74/295 (25%), Positives = 120/295 (40%), Gaps = 56/295 (18%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDID-DVRREVEIMRHLPKHPNIV 145
           ++LG G +   ++      G+  A K I+   +KTE  +     RE  +++ L KH NIV
Sbjct: 11  EKLGEGSYATVYKGISRINGQLVALKVIS---MKTEEGVPFTAIREASLLKGL-KHANIV 66

Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMH 205
              +    K+ +  V E          I + G             +LR +   H   ++H
Sbjct: 67  LLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILH 126

Query: 206 RDLKPENFLFADGSENSQLKAIDFGL----SIFFKPGEQFCEIVGSPYYMAPEVL--RRN 259
           RDLKP+N L    S   +LK  DFGL    SI   P + +   V + +Y  P+VL    +
Sbjct: 127 RDLKPQNLLI---SYLGELKLADFGLARAKSI---PSQTYSSEVVTLWYRPPDVLLGATD 180

Query: 260 YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE------RDPWPKVSK- 312
           Y   +D+W AG I   +L G P F      G++    + +  +        D WP VSK 
Sbjct: 181 YSSALDIWGAGCIFIEMLQGQPAF-----PGVSDVFEQLEKIWTVLGVPTEDTWPGVSKL 235

Query: 313 ---------------------------EAKELVKNMLDPNPYNRLTLEEVLENPW 340
                                      +A++L   ML   P +R++ ++ L +P+
Sbjct: 236 PNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPY 290

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 74.0 bits (182), Expect = 3e-14
 Identities = 77/271 (28%), Positives = 119/271 (43%), Gaps = 60/271 (22%)

Query: 110 ACKKIAKE-KLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGE 168
           +CK++ +E K+      D+V   ++I+    + P+I  ++E       IY+V EL +  +
Sbjct: 42  SCKRVFRELKMLCFFKHDNVLSALDIL----QPPHIDPFEE-------IYVVTELMQS-D 89

Query: 169 LFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID 228
           L   IV+    +          ILR +K  H  G++HRD+KP N L    + N  LK  D
Sbjct: 90  LHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV---NSNCVLKICD 146

Query: 229 FGLSIFFKPGEQFCEI---VGSPYYMAPEVL--RRNYGPEIDVWSAGVI----------- 272
           FGL+   +P E    +   V + YY APE+L   R+Y   +D+WS G I           
Sbjct: 147 FGLARVEEPDES-KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILF 205

Query: 273 -----------IYILLCGVPPFWAET---EEGIAHAIIRGKIDFERDPWPKV-------- 310
                      I  LL G P   A     E   AH I+RG     + P   V        
Sbjct: 206 QAQSPIQQLDLITDLL-GTPSLEAMRSACEGARAH-ILRGP---HKPPSLPVLYTLSSQA 260

Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           + EA  L+  ML  +P  R++  + L +P++
Sbjct: 261 THEAVHLLCRMLVFDPDKRISAADALAHPYL 291

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 72.8 bits (178), Expect = 8e-14
 Identities = 80/322 (24%), Positives = 140/322 (43%), Gaps = 55/322 (17%)

Query: 66  QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI 125
           Q  SV    +   +L +Y   K +G G  GI    F+   G   A KK+++   + +   
Sbjct: 6   QFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR-PFQNQTHA 64

Query: 126 DDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY 179
               RE+ +++ +  H NI+      T +++ E+   +YLVMEL +      ++++    
Sbjct: 65  KRAYRELVLLKCV-NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDAN--LCQVIHMELD 121

Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
            ER +  + + +L  +K  H  G++HRDLKP N +      +  LK +DFGL+       
Sbjct: 122 HERMSYLLYQ-MLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTACTNF 177

Query: 240 QFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPF--------WAETEEG 290
                V + YY APEV L   Y   +D+WS G I+  L+ G   F        W +  E 
Sbjct: 178 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQ 237

Query: 291 IA----------HAIIRGKIDFERDPWPKVS---------------------KEAKELVK 319
           +              +R  ++  R  +P +S                      +A++L+ 
Sbjct: 238 LGTPSAEFMNRLQPTVRNYVE-NRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLS 296

Query: 320 NMLDPNPYNRLTLEEVLENPWI 341
            ML  +P  R++++E L +P+I
Sbjct: 297 KMLVIDPDKRISVDEALRHPYI 318

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 71.7 bits (176), Expect = 8e-14
 Identities = 63/213 (29%), Positives = 88/213 (41%), Gaps = 32/213 (15%)

Query: 84  TFGKELGRGEFGITHQC-FEIETGETYACKKIAKEKLKT---EIDIDDVRREVEIMRHLP 139
            F K+LG G FG    C ++     T    ++A + L     E    D  RE+EI+R L 
Sbjct: 7   KFIKQLGEGHFGKVELCRYDPLGDNTGE--QVAVKSLNHSGEEQHRSDFEREIEILRTL- 63

Query: 140 KHPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVG-KTILRI-V 195
            H NIV YK   E     ++ L+ME    G L         Y +R    +  K +L    
Sbjct: 64  DHENIVKYKGVCEKPGGRSLRLIMEYLPSGSL-------RDYLQRHRDQINLKRLLLFSS 116

Query: 196 KVC------HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVG 246
           ++C           +HRDL   N L         +K  DFGL+      + +    E   
Sbjct: 117 QICKGMDYLGSQRYIHRDLAARNILV---ESEDLVKISDFGLAKVLPEDKDYYYVKEPGE 173

Query: 247 SP-YYMAPEVLR-RNYGPEIDVWSAGVIIYILL 277
           SP ++ APE LR   +    DVWS GV +Y L 
Sbjct: 174 SPIFWYAPECLRTSKFSSASDVWSFGVTLYELF 206

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 71.3 bits (175), Expect = 1e-13
 Identities = 69/286 (24%), Positives = 114/286 (39%), Gaps = 51/286 (17%)

Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           E+G G  G  ++    +TG   A K++ +   K E     +  +++++      P IV  
Sbjct: 22  EIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENK--RILMDLDVVLKSHDCPYIVKC 79

Query: 148 KEAYEDKDAIYLVMEL----CEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH---- 199
              +     +++ MEL     +  +L  RI  +G   E      GK  + IVK  H    
Sbjct: 80  YGYFITDSDVFICMELMSTCLD--KLLKRI--QGPIPEDIL---GKMTVAIVKALHYLKE 132

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL--- 256
           ++GV+HRD+KP N L      +  +K  DFG+S      +      G   YMAPE +   
Sbjct: 133 KHGVIHRDVKPSNILL---DASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPP 189

Query: 257 --RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRG-KIDFE------RDPW 307
                Y    DVWS G+ +  L  G  P+             +  K +FE      ++  
Sbjct: 190 DPNPKYDIRADVWSLGISLVELATGQFPY-------------KNCKTEFEVLTKILQEEP 236

Query: 308 PKV------SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHA 347
           P +      S +    V   L  +   R    E+L++P+I+    A
Sbjct: 237 PSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYETA 282

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 72.4 bits (177), Expect = 2e-13
 Identities = 64/218 (29%), Positives = 99/218 (45%), Gaps = 31/218 (14%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y  G  +G G FG+ ++   I+T E  A KK+ +       D     RE+ IM++L  H 
Sbjct: 68  YKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQ-------DPQYKNRELLIMKNL-NHI 119

Query: 143 NIVTYKEAY------EDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAA-------AV 187
           NI+  K+ Y      +++  I+L + +    E   + V+K   HY     A         
Sbjct: 120 NIIFLKDYYYTECFKKNEKNIFLNVVM----EFIPQTVHKYMKHYARNNHALPLFLVKLY 175

Query: 188 GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS 247
              + R +   H   + HRDLKP+N L    +    LK  DFG +     G++    + S
Sbjct: 176 SYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHT--LKLCDFGSAKNLLAGQRSVSYICS 233

Query: 248 PYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPF 283
            +Y APE++    NY   ID+WS G II  ++ G P F
Sbjct: 234 RFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIF 271

Length = 440

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 69.4 bits (170), Expect = 3e-13
 Identities = 67/264 (25%), Positives = 115/264 (43%), Gaps = 31/264 (11%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEI-DIDDVRREVEIMRHLPKHP 142
             G  +G+GEFG      ++  G  Y  +K+A + LK +         E  +M  L +HP
Sbjct: 9   KLGATIGKGEFG------DVMLG-DYRGQKVAVKCLKDDSTAAQAFLAEASVMTTL-RHP 60

Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC---- 198
           N+V         + +Y+V E    G L D + ++G    RA   + + +   + VC    
Sbjct: 61  NLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRG----RAVITLAQQLGFALDVCEGME 116

Query: 199 --HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY-YMAPEV 255
              E   +HRDL   N L    SE+   K  DFGL+   K   Q  +    P  + APE 
Sbjct: 117 YLEEKNFVHRDLAARNVLV---SEDLVAKVSDFGLA---KEASQGQDSGKLPVKWTAPEA 170

Query: 256 LRRN-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           LR   +  + DVWS G++++ I   G  P+     + +   + +G   +  +       E
Sbjct: 171 LREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKG---YRMEAPEGCPPE 227

Query: 314 AKELVKNMLDPNPYNRLTLEEVLE 337
             +++K+  + +P  R T +++ E
Sbjct: 228 VYKVMKDCWELDPAKRPTFKQLRE 251

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 70.9 bits (173), Expect = 4e-13
 Identities = 76/321 (23%), Positives = 136/321 (42%), Gaps = 53/321 (16%)

Query: 66  QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI 125
           Q  SV    +   +L +Y   K +G G  GI    ++       A KK+++   + +   
Sbjct: 2   QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 60

Query: 126 DDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY 179
               RE+ +M+ +  H NI+      T +++ E+   +YLVMEL +      +++     
Sbjct: 61  KRAYRELVLMKCV-NHKNIISLLNVFTPQKSLEEFQDVYLVMELMDAN--LCQVIQMELD 117

Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
            ER +  + + +  I K  H  G++HRDLKP N +      +  LK +DFGL+       
Sbjct: 118 HERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSF 173

Query: 240 QFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII---------------------YILL 277
                V + YY APEV L   Y   +D+WS G I+                      I  
Sbjct: 174 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233

Query: 278 CGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SKEAKELVKN 320
            G P P + +  +      +  +  +    +PK+                + +A++L+  
Sbjct: 234 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSK 293

Query: 321 MLDPNPYNRLTLEEVLENPWI 341
           ML  +P  R++++E L++P+I
Sbjct: 294 MLVIDPAKRISVDEALQHPYI 314

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 70.9 bits (174), Expect = 4e-13
 Identities = 86/331 (25%), Positives = 141/331 (42%), Gaps = 70/331 (21%)

Query: 66  QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI 125
           Q  SV    +   +L +Y   K +G G  GI    ++  TG+  A KK+++   +     
Sbjct: 1   QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSR-PFQNVTHA 59

Query: 126 DDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVME-----LCEGGELFDRIV 174
               RE+ +M+ L  H NI+      T +++ E+   +YLVME     LC+       ++
Sbjct: 60  KRAYRELVLMK-LVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQ-------VI 111

Query: 175 NKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF 234
                 ER +  + + +  I K  H  G++HRDLKP N +      +  LK +DFGL+  
Sbjct: 112 QMDLDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLA-- 165

Query: 235 FKPGEQF--CEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVI------------------- 272
              G  F     V + YY APEV L   Y   +D+WS G I                   
Sbjct: 166 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQ 225

Query: 273 ---IYILLCGVPP--FWAETEEGIAHAII-RGK---IDFER----DPWPKVSKE------ 313
              I   L G P   F +  +  + + +  R K     FE       +P  S+       
Sbjct: 226 WNKIIEQL-GTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKA 284

Query: 314 --AKELVKNMLDPNPYNRLTLEEVLENPWIK 342
             A++L+  ML  +P  R+++++ L++P+I 
Sbjct: 285 SQARDLLSKMLVIDPEKRISVDDALQHPYIN 315

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 71.3 bits (175), Expect = 7e-13
 Identities = 62/233 (26%), Positives = 94/233 (40%), Gaps = 43/233 (18%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           + +Y   + +G+G  G  +  ++       A KKI ++  +  +      RE +I   L 
Sbjct: 1   MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADL- 59

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFD--------RIVNKGHYTERAAAAVGKTI 191
            HP IV       D D +Y  M   EG  L            ++K    + +        
Sbjct: 60  IHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSV----GAF 115

Query: 192 LRI-VKVC------HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-------- 236
           L I  K+C      H  GV+HRDLKP+N L     E   +  +D+G +IF K        
Sbjct: 116 LSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGE---VVILDWGAAIFKKLEEEDLLD 172

Query: 237 -----PGEQFCE------IVGSPYYMAPEVLRRNYGPE-IDVWSAGVIIYILL 277
                    +        IVG+P YMAPE L      E  D+++ GVI+Y +L
Sbjct: 173 IDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQML 225

Length = 932

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 69.3 bits (169), Expect = 7e-13
 Identities = 76/322 (23%), Positives = 134/322 (41%), Gaps = 78/322 (24%)

Query: 86  GKELGRGEFGITHQCFEIETGET--YACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           G ++GRG +G  ++    +  +   YA K+I    +          RE+ ++R L KHPN
Sbjct: 6   GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMS-----ACREIALLREL-KHPN 59

Query: 144 IVTYKEAY--EDKDAIYLVMELCEGGELFDRIVNKGHYTERA-----------AAAVGKT 190
           +++ ++ +       ++L+ +  E  +L+  I  K H   +A             ++   
Sbjct: 60  VISLQKVFLSHADRKVWLLFDYAEH-DLWHII--KFHRASKANKKPVQLPRGMVKSLLYQ 116

Query: 191 ILRIVKVCHENGVMHRDLKPENFL-FADGSENSQLKAIDFGLSIFF----KPGEQFCEIV 245
           IL  +   H N V+HRDLKP N L   +G E  ++K  D G +  F    KP      +V
Sbjct: 117 ILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVV 176

Query: 246 GSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPF-------------------- 283
            + +Y APE+L   R+Y   ID+W+ G I   LL   P F                    
Sbjct: 177 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 236

Query: 284 ------------WAETEEGIAHAIIRGKIDFERDPWPKVS-------------KEAKELV 318
                       W + ++   H+ +    DF R+ +   S              +A  L+
Sbjct: 237 IFNVMGFPADKDWEDIKKMPEHSTLMK--DFRRNTYTNCSLIKYMEKHKVKPDSKAFHLL 294

Query: 319 KNMLDPNPYNRLTLEEVLENPW 340
           + +L  +P  R+T E+ +++P+
Sbjct: 295 QKLLTMDPIKRITSEQAMQDPY 316

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 68.3 bits (167), Expect = 9e-13
 Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 29/273 (10%)

Query: 73  NPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRRE 131
           NP+E       TF KELG G+FG+ H       G+  A  K+A + +    +  +D   E
Sbjct: 2   NPSE------LTFMKELGSGQFGVVH------LGKWRAQIKVAIKAINEGAMSEEDFIEE 49

Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKT 190
            ++M  L  HP +V        +  +Y+V E  E G L + +   +G  ++    ++ + 
Sbjct: 50  AKVMMKL-SHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQD 108

Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY- 249
           +   ++    N  +HRDL   N L    S    +K  DFG++ +    +++    G+ + 
Sbjct: 109 VCEGMEYLERNSFIHRDLAARNCLV---SSTGVVKVSDFGMTRYVL-DDEYTSSSGAKFP 164

Query: 250 --YMAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERD 305
             +  PEV   + Y  + DVWS GV+++ +   G  PF  ++   +   I RG     R 
Sbjct: 165 VKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRG----FRL 220

Query: 306 PWPKV-SKEAKELVKNMLDPNPYNRLTLEEVLE 337
             PK+ S    E++ +     P  R T  E+L 
Sbjct: 221 YRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 68.2 bits (167), Expect = 1e-12
 Identities = 65/242 (26%), Positives = 99/242 (40%), Gaps = 37/242 (15%)

Query: 84  TFGKELGRGEFGITHQ-CFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHLP 139
           T G+ +G G+FG  +Q  +     E  A   +A +  K         +   E  IMR   
Sbjct: 9   TLGRCIGEGQFGDVYQGVYMSPENEKIA---VAVKTCKNCTSPSVREKFLQEAYIMRQF- 64

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY--TERAAAAVGKTILRIVKV 197
            HP+IV       + + +++VMEL   GEL         Y    + +  +   IL   ++
Sbjct: 65  DHPHIVKLIGVITE-NPVWIVMELAPLGEL-------RSYLQVNKYSLDLASLILYSYQL 116

Query: 198 C------HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY- 249
                       +HRD+   N L +       +K  DFGLS + +    +    G  P  
Sbjct: 117 STALAYLESKRFVHRDIAARNVLVSS---PDCVKLGDFGLSRYLEDESYYKASKGKLPIK 173

Query: 250 YMAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPF-WAETEEGIAHAIIRGKIDFERDP 306
           +MAPE +  R +    DVW  GV ++ IL+ GV PF   +  + I   I  G    ER P
Sbjct: 174 WMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGR-IENG----ERLP 228

Query: 307 WP 308
            P
Sbjct: 229 MP 230

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 68.9 bits (168), Expect = 1e-12
 Identities = 63/226 (27%), Positives = 103/226 (45%), Gaps = 31/226 (13%)

Query: 86  GKELGRGEFGITHQCFEIETGET--YACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           G ++GRG +G  ++    +  +   YA K+I    +          RE+ ++R L KHPN
Sbjct: 6   GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMS-----ACREIALLREL-KHPN 59

Query: 144 IVTYKEAY--EDKDAIYLVMELCEGGELFDRIVNKGHYTERA-----------AAAVGKT 190
           ++  ++ +       ++L+ +  E  +L+  I  K H   +A             ++   
Sbjct: 60  VIALQKVFLSHSDRKVWLLFDYAEH-DLWHII--KFHRASKANKKPMQLPRSMVKSLLYQ 116

Query: 191 ILRIVKVCHENGVMHRDLKPENFL-FADGSENSQLKAIDFGLSIFF----KPGEQFCEIV 245
           IL  +   H N V+HRDLKP N L   +G E  ++K  D G +  F    KP      +V
Sbjct: 117 ILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVV 176

Query: 246 GSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEE 289
            + +Y APE+L   R+Y   ID+W+ G I   LL   P F    E+
Sbjct: 177 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 222

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 68.5 bits (167), Expect = 1e-12
 Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 14/195 (7%)

Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP--KHPNIV 145
           E+G G +G   +  +++ G  +   K  + +   E       REV ++RHL   +HPN+V
Sbjct: 8   EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 67

Query: 146 TYKE----AYEDKDA-IYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
              +    +  D++  + LV E  +       D++   G  TE     + + +LR +   
Sbjct: 68  RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ-LLRGLDFL 126

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV-LR 257
           H + V+HRDLKP+N L        Q+K  DFGL+  +        +V + +Y APEV L+
Sbjct: 127 HSHRVVHRDLKPQNILVTSS---GQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ 183

Query: 258 RNYGPEIDVWSAGVI 272
            +Y   +D+WS G I
Sbjct: 184 SSYATPVDLWSVGCI 198

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 62.2 bits (152), Expect = 2e-12
 Identities = 16/61 (26%), Positives = 38/61 (62%)

Query: 388 QIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVT 447
           ++++ F + D D +G ++ +ELK  L  +G+ +S+ ++  ++   D DG+G +  +EF+ 
Sbjct: 1   ELREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLE 60

Query: 448 M 448
           +
Sbjct: 61  L 61

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 67.5 bits (165), Expect = 2e-12
 Identities = 68/216 (31%), Positives = 96/216 (44%), Gaps = 43/216 (19%)

Query: 85  FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           F ++LG+G FG    C     +  TGE  A KK+      T   + D  RE+EI++ L +
Sbjct: 8   FIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---TAEHLRDFEREIEILKSL-Q 63

Query: 141 HPNIVTYKE-AYE-DKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
           H NIV YK   Y   +  + LVME    G L D +       +       K +L   ++C
Sbjct: 64  HDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHR-----KLLLYASQIC 118

Query: 199 H------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF----------KPGEQFC 242
                      +HRDL   N L    SEN ++K  DFGL+             +PGE   
Sbjct: 119 KGMEYLGSKRYVHRDLATRNILVE--SEN-RVKIGDFGLTKVLPQDKEYYKVREPGE--- 172

Query: 243 EIVGSP-YYMAPEVLRRN-YGPEIDVWSAGVIIYIL 276
               SP ++ APE L  + +    DVWS GV++Y L
Sbjct: 173 ----SPIFWYAPESLTESKFSVASDVWSFGVVLYEL 204

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 67.8 bits (165), Expect = 3e-12
 Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 15/208 (7%)

Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
           +L +Y   K +G G  GI    ++       A KK+++   + +       RE+ +M+ +
Sbjct: 22  VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV 80

Query: 139 PKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
             H NI+      T +++ E+   +Y+VMEL +      +++      ER +  + + + 
Sbjct: 81  -NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQMLC 137

Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
            I K  H  G++HRDLKP N +      +  LK +DFGL+            V + YY A
Sbjct: 138 GI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193

Query: 253 PEV-LRRNYGPEIDVWSAGVIIYILLCG 279
           PEV L   Y   +D+WS G I+  ++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 66.5 bits (162), Expect = 4e-12
 Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 18/203 (8%)

Query: 87  KELGRGEFGITHQC-FEIE---TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           ++LG G FG    C ++ E   TGE  A K +  E       I D+++E+EI+R+L  H 
Sbjct: 10  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNL-YHE 66

Query: 143 NIVTYKEAYEDK--DAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKVCH 199
           NIV YK    +   + I L+ME    G L + +  NK     +        I + +    
Sbjct: 67  NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLG 126

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI---VGSP-YYMAPEV 255
               +HRDL   N L    SE+ Q+K  DFGL+   +  +++  +   + SP ++ APE 
Sbjct: 127 SRQYVHRDLAARNVLVE--SEH-QVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPEC 183

Query: 256 L-RRNYGPEIDVWSAGVIIYILL 277
           L +  +    DVWS GV +Y LL
Sbjct: 184 LIQSKFYIASDVWSFGVTLYELL 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 65.6 bits (160), Expect = 9e-12
 Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 46/233 (19%)

Query: 85  FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI---DDVRREVEIMRHLPKH 141
           F +ELG G FG  ++       E  +   +A + LK   +     + R+E E+M  L +H
Sbjct: 9   FLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDL-QH 67

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI---------L 192
           PNIV        +    ++ E    G+L + +V    +++  A +  +T+         L
Sbjct: 68  PNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFL 127

Query: 193 RIV-------KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIV 245
            I        +    +  +HRDL   N L  +G     +K  DFGLS          +I 
Sbjct: 128 HIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGL---TVKISDFGLSR---------DIY 175

Query: 246 GSPYY------------MAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPFW 284
            + YY            M PE +L   +  E D+WS GV+++ I   G+ P++
Sbjct: 176 SADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYY 228

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 65.8 bits (160), Expect = 1e-11
 Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 16/211 (7%)

Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           ELG G  G+  +     +G   A +K+   ++K  I  + + RE++++ H    P IV +
Sbjct: 12  ELGAGNGGVVTKVQHKPSGLIMA-RKLIHLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 68

Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHR 206
             A+     I + ME  +GG L   +       E     V   +LR +    E + +MHR
Sbjct: 69  YGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHR 128

Query: 207 DLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPE 263
           D+KP N L    +   ++K  DFG+S  +       F   VG+  YM+PE L+  +Y  +
Sbjct: 129 DVKPSNILV---NSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQ 182

Query: 264 IDVWSAGVIIYILLCG---VPPFWAETEEGI 291
            D+WS G+ +  L  G   +PP  A+  E I
Sbjct: 183 SDIWSMGLSLVELAIGRYPIPPPDAKELEAI 213

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 65.1 bits (159), Expect = 1e-11
 Identities = 70/283 (24%), Positives = 126/283 (44%), Gaps = 39/283 (13%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIA-----KEKLKTEIDIDDVRREVEIM 135
           D     +ELGRG +G+  +   + TG   A K+I      +E+ +  +D+D   R V+  
Sbjct: 1   DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDC- 59

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKG-HYTERAAAAVGKTIL 192
                 P  VT+  A   +  +++ ME+ +    + + ++ +KG    E     +  +I+
Sbjct: 60  ------PYTVTFYGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIV 113

Query: 193 RIVKVCHEN-GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           + ++  H    V+HRD+KP N L    + N Q+K  DFG+S +           G   YM
Sbjct: 114 KALEYLHSKLSVIHRDVKPSNVLI---NRNGQVKLCDFGISGYLVDSVAKTIDAGCKPYM 170

Query: 252 APEVL-----RRNYGPEIDVWSAGVIIYILLCGVPPF--WAETEEGIAHAIIRGKIDFER 304
           APE +     ++ Y  + DVWS G+ +  L  G  P+  W    + +   +         
Sbjct: 171 APERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVV--------E 222

Query: 305 DPWPKV-----SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           +P P++     S E ++ V   L  N   R    E+L++P+ +
Sbjct: 223 EPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFE 265

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 64.7 bits (158), Expect = 2e-11
 Identities = 69/270 (25%), Positives = 109/270 (40%), Gaps = 36/270 (13%)

Query: 87  KELGRGEFGITHQCFEIETGETY---ACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           K+LG G FG+  +     +G      A K +  +KL ++I +DD  +E  IM  L  H N
Sbjct: 1   KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKL-SDI-MDDFLKEAAIMHSL-DHEN 57

Query: 144 IVT-YKEAYEDKDAIYLVMELCEGGELFDRI--VNKGHYTERAAAAVGKTILRIVKVC-- 198
           ++  Y         + +V EL   G L DR+     GH+       +       V++   
Sbjct: 58  LIRLYGVVLTHP--LMMVTELAPLGSLLDRLRKDALGHFL------ISTLCDYAVQIANG 109

Query: 199 ----HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF---CEIVGSPY-Y 250
                    +HRDL   N L A    + ++K  DFGL       E      E +  P+ +
Sbjct: 110 MRYLESKRFIHRDLAARNILLA---SDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAW 166

Query: 251 MAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWP 308
            APE LR R +    DVW  GV ++ +   G  P+   +   I   I +     ER   P
Sbjct: 167 CAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEG---ERLERP 223

Query: 309 K-VSKEAKELVKNMLDPNPYNRLTLEEVLE 337
           +   ++   ++      NP +R T   + E
Sbjct: 224 EACPQDIYNVMLQCWAHNPADRPTFAALRE 253

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 62.8 bits (153), Expect = 6e-11
 Identities = 52/204 (25%), Positives = 73/204 (35%), Gaps = 31/204 (15%)

Query: 87  KELGRGEFGITHQCFEIETGE---TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           KELG G FG   +   +         A K + +E +       +  RE  +M  L  HP 
Sbjct: 1   KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAA--GKKEFLREASVMAQL-DHPC 57

Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGV 203
           IV      +  + + LVMEL   G L   +  +          +   +   +        
Sbjct: 58  IVRLIGVCKG-EPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHF 116

Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR---RNY 260
           +HRDL   N L  +     Q K  DFG+S             GS YY A    R   + Y
Sbjct: 117 VHRDLAARNVLLVN---RHQAKISDFGMSRALGA--------GSDYYRATTAGRWPLKWY 165

Query: 261 GPEI----------DVWSAGVIIY 274
            PE           DVWS GV ++
Sbjct: 166 APECINYGKFSSKSDVWSYGVTLW 189

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 63.5 bits (154), Expect = 6e-11
 Identities = 62/229 (27%), Positives = 100/229 (43%), Gaps = 29/229 (12%)

Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           DK T GK LG G FG  +  +   I+  +      +A + LK   TE D+ D+  E+E+M
Sbjct: 15  DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 74

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
           + + KH NI+    A      +Y+++E    G L + +                V     
Sbjct: 75  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQM 134

Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           T +   +    + R ++       +HRDL   N L    +EN+ +K  DFGL+      +
Sbjct: 135 TFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDVNNID 191

Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 192 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 240

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 62.4 bits (152), Expect = 9e-11
 Identities = 72/264 (27%), Positives = 110/264 (41%), Gaps = 40/264 (15%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIV 145
           ++LG G+FG      E+  G       +A + LK   +D  D   E +IM+ L +HP ++
Sbjct: 12  RKLGAGQFG------EVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKL-RHPKLI 64

Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKG-------HYTERAA-AAVGKTILRIVKV 197
                   ++ IY+V EL + G L + +              + AA  A G   L     
Sbjct: 65  QLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYL----- 119

Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPE 254
                 +HRDL   N L     EN+  K  DFGL+   K    +    G+ +   + APE
Sbjct: 120 -EAQNYIHRDLAARNVLVG---ENNICKVADFGLARVIKEDI-YEAREGAKFPIKWTAPE 174

Query: 255 VLRRN-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK 312
               N +  + DVWS G+++  I+  G  P+   T   +   + +G     R P P    
Sbjct: 175 AALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY----RMPCP--PG 228

Query: 313 EAKELVKNMLD---PNPYNRLTLE 333
             KEL   MLD    +P +R T E
Sbjct: 229 CPKELYDIMLDCWKEDPDDRPTFE 252

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 62.5 bits (152), Expect = 1e-10
 Identities = 62/225 (27%), Positives = 92/225 (40%), Gaps = 37/225 (16%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRH 137
           +  +FGK LG G FG   +       ++ A  K+A + LK      +   +  E++IM H
Sbjct: 35  NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSH 94

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG----------HYTERAAAAV 187
           L  H NIV    A      I ++ E C  G+L + +  K            ++ + A   
Sbjct: 95  LGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAK-- 152

Query: 188 GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL-------SIFFKPGEQ 240
           G   L   K C     +HRDL   N L   G     +K  DFGL       S +   G  
Sbjct: 153 GMAFLA-SKNC-----IHRDLAARNVLLTHG---KIVKICDFGLARDIMNDSNYVVKGNA 203

Query: 241 FCEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVPPF 283
              +     +MAPE +    Y  E DVWS G++++ I   G  P+
Sbjct: 204 RLPV----KWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPY 244

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair

 Score = 57.0 bits (138), Expect = 1e-10
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 468 FDKNQSGFIEVDELKEVLLEDNAGPNG---DQTIRDILRDVDLDRDGRISFEEFKAMM 522
            DK+  G+I+V+EL+++L            ++ I     ++D D DGRISFEEF   M
Sbjct: 3   LDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60

Length = 60

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 62.7 bits (152), Expect = 1e-10
 Identities = 63/230 (27%), Positives = 103/230 (44%), Gaps = 17/230 (7%)

Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           ELG G  G+  +     +G   A K I  E +K  I  + + RE++++ H    P IV +
Sbjct: 12  ELGAGNGGVVFKVSHKPSGLIMARKLIHLE-IKPAIR-NQIIRELQVL-HECNSPYIVGF 68

Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHR 206
             A+     I + ME  +GG L   +   G   E+    V   +++ +    E + +MHR
Sbjct: 69  YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 128

Query: 207 DLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPE 263
           D+KP N L    +   ++K  DFG+S  +       F   VG+  YM+PE L+  +Y  +
Sbjct: 129 DVKPSNILV---NSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQ 182

Query: 264 IDVWSAGVIIYILLCG----VPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
            D+WS G+ +  +  G     PP   E E      +     + E  P P+
Sbjct: 183 SDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPR 232

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 61.7 bits (150), Expect = 1e-10
 Identities = 68/279 (24%), Positives = 113/279 (40%), Gaps = 48/279 (17%)

Query: 87  KELGRGEFGITHQCF----EIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
             LGRGEFG          E E GET    K A +K K E    + RRE+++ R L  H 
Sbjct: 11  TTLGRGEFGEVFLAKAKGIEEEGGETLVLVK-ALQKTKDENLQSEFRRELDMFRKL-SHK 68

Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGEL--FDRIVNKGHYTERAAAAVGKTILRIV-KVCH 199
           N+V       + +  Y+++E  + G+L  F R         +      K  + +  ++  
Sbjct: 69  NVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIAL 128

Query: 200 ------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY--- 250
                     +HRDL   N L    S   ++K     LS          ++  S YY   
Sbjct: 129 GMDHLSNARFVHRDLAARNCLV---SSQREVKVSLLSLSK---------DVYNSEYYKLR 176

Query: 251 --------MAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKI 300
                   +APE ++ + +  + DVWS GV+++ +   G  PF+  ++E + + +  GK+
Sbjct: 177 NALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKL 236

Query: 301 DFERDPWPKVSKEAKELVKNML---DPNPYNRLTLEEVL 336
           +      P        L K M      NP +R +  E++
Sbjct: 237 E-----LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELV 270

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 63.7 bits (155), Expect = 2e-10
 Identities = 35/101 (34%), Positives = 59/101 (58%), Gaps = 10/101 (9%)

Query: 244 IVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF 302
           I+G+P Y+APE+L  + +GP +D W+ GV ++  L G+PPF  ET + +   I+   I  
Sbjct: 540 ILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDI-- 597

Query: 303 ERDPWP----KVSKEAKELVKNMLDPNPYNRLTLEEVLENP 339
              PWP    K+S  A+  ++ +L  +P  R  L+E+ ++P
Sbjct: 598 ---PWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHP 635

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 61.8 bits (150), Expect = 2e-10
 Identities = 74/282 (26%), Positives = 121/282 (42%), Gaps = 39/282 (13%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDID-DVRREVEIMRHLPKHPNIVTY 147
           LG G  G  ++ + + T    A K I    L   +++   +  E+EI+      P I+ +
Sbjct: 9   LGHGNGGTVYKAYHLLTRRILAVKVIP---LDITVELQKQIMSELEILYKCDS-PYIIGF 64

Query: 148 KEAYEDKDAIYLVMELCEGGEL--FDRIVNKGHYTERAAAAV--GKTILRIVKVCHENGV 203
             A+  ++ I +  E  +GG L  + +I    H   R A AV  G T L  +K+      
Sbjct: 65  YGAFFVENRISICTEFMDGGSLDVYRKIPE--HVLGRIAVAVVKGLTYLWSLKI------ 116

Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE-----IVGSPYYMAPE-VLR 257
           +HRD+KP N L    +   Q+K  DFG+S       Q         VG+  YMAPE +  
Sbjct: 117 LHRDVKPSNMLV---NTRGQVKLCDFGVS------TQLVNSIAKTYVGTNAYMAPERISG 167

Query: 258 RNYGPEIDVWSAGVIIYILLCG---VPPFWAETEEGIAHAIIRGKIDFE--RDPWPKVSK 312
             YG   DVWS G+    L  G    P         +   +++  +D +    P  + S+
Sbjct: 168 EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSE 227

Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWIK--NDNHAPNVSL 352
           +    +   +   P  R   E ++++P+I   ND +A  VS+
Sbjct: 228 KFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDGNAEVVSM 269

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 61.5 bits (149), Expect = 2e-10
 Identities = 69/249 (27%), Positives = 107/249 (42%), Gaps = 51/249 (20%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L K T G+ +G GEFG   Q      GE Y  +K+A + +K ++       E  +M  L 
Sbjct: 5   LQKLTLGEIIGEGEFGAVLQ------GE-YTGQKVAVKNIKCDVTAQAFLEETAVMTKL- 56

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
            H N+V         + +Y+VMEL   G L + +  +G    RA  +V + +   + V  
Sbjct: 57  HHKNLVRLLGVIL-HNGLYIVMELMSKGNLVNFLRTRG----RALVSVIQLLQFSLDVAE 111

Query: 200 ------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY-YMA 252
                    ++HRDL   N L    SE+   K  DFGL+   + G    +    P  + A
Sbjct: 112 GMEYLESKKLVHRDLAARNILV---SEDGVAKVSDFGLA---RVGSMGVDNSKLPVKWTA 165

Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
           PE L+   +  + DVWS GV+++ +                         + R P+PK+S
Sbjct: 166 PEALKHKKFSSKSDVWSYGVLLWEVF-----------------------SYGRAPYPKMS 202

Query: 312 -KEAKELVK 319
            KE KE V+
Sbjct: 203 LKEVKECVE 211

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 61.3 bits (149), Expect = 2e-10
 Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 58/278 (20%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHLPKHPN 143
           +++G+G FG      ++  G      ++A +  ++ +  D  R+   E EI++    HPN
Sbjct: 1   EKIGKGNFG------DVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQY-DHPN 53

Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE--N 201
           IV        K  IY+VMEL  GG L         +  +    +  T+ +++++  +   
Sbjct: 54  IVKLIGVCVQKQPIYIVMELVPGGSLLT-------FLRKKKNRL--TVKKLLQMSLDAAA 104

Query: 202 GVM--------HRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---- 249
           G+         HRDL   N L     EN+ LK  DFG+S   +  E     V        
Sbjct: 105 GMEYLESKNCIHRDLAARNCLV---GENNVLKISDFGMS---REEEGGIYTVSDGLKQIP 158

Query: 250 --YMAPEVLRRNYG---PEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFE 303
             + APE L  NYG    E DVWS G++++     G  P+      G+++   R +I+  
Sbjct: 159 IKWTAPEAL--NYGRYTSESDVWSYGILLWETFSLGDTPY-----PGMSNQQTRERIESG 211

Query: 304 -RDPWPKVSKEAKELVKNML---DPNPYNRLTLEEVLE 337
            R P P++  E  E+ + ML     +P NR +  E+  
Sbjct: 212 YRMPAPQLCPE--EIYRLMLQCWAYDPENRPSFSEIYN 247

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 61.5 bits (149), Expect = 2e-10
 Identities = 77/285 (27%), Positives = 119/285 (41%), Gaps = 52/285 (18%)

Query: 87  KELGRGEFG-ITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           + LG G FG ++  C++     TGE  A K + +E    + +    ++E+ I++ L  H 
Sbjct: 10  RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTL-YHE 66

Query: 143 NIVTYKEAYEDK--DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC-- 198
           NIV YK    ++    + L+ME    G L D       Y  +    + + +L   ++C  
Sbjct: 67  NIVKYKGCCSEQGGKGLQLIMEYVPLGSLRD-------YLPKHKLNLAQLLLFAQQICEG 119

Query: 199 ----HENGVMHRDLKPENFLFADGSENSQLKAI-DFGLSIFFKPGEQFCEIV---GSP-Y 249
               H    +HRDL   N L     +N +L  I DFGL+     G ++  +     SP +
Sbjct: 120 MAYLHSQHYIHRDLAARNVLL----DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 175

Query: 250 YMAPEVLRRN-YGPEIDVWSAGVIIYILL--CG---VPPFWAETEEGIAHAII------- 296
           + A E L+ N +    DVWS GV +Y LL  C     PP   E   G     +       
Sbjct: 176 WYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIE 235

Query: 297 ---RGKIDFERDPWPK-VSKEAKELVKNMLDPNPYNRLTLEEVLE 337
              RG     R P PK   +E   L+KN  +     R T   ++ 
Sbjct: 236 LLERG----MRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 61.2 bits (148), Expect = 2e-10
 Identities = 78/268 (29%), Positives = 110/268 (41%), Gaps = 47/268 (17%)

Query: 89  LGRGEFGITHQCFEIETG----ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNI 144
           LG+G FG      E+  G    +T    K  KE L  E+ I  +  E  I++    HPNI
Sbjct: 3   LGKGNFG------EVFKGTLKDKTPVAVKTCKEDLPQELKIKFLS-EARILKQY-DHPNI 54

Query: 145 VTYKEAYEDKDAIYLVMELCEGGELF-------DRIVNKGHYTERAAAAVGKTILRIVKV 197
           V        +  IY+VMEL  GG+         D +  K        AA G   L   K 
Sbjct: 55  VKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLES-KN 113

Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS------IFFKPGEQFCEIVGSPYYM 251
           C     +HRDL   N L     EN+ LK  DFG+S      I+   G +   I     + 
Sbjct: 114 C-----IHRDLAARNCLVG---ENNVLKISDFGMSRQEDDGIYSSSGLKQIPI----KWT 161

Query: 252 APEVLRRNYG---PEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
           APE L  NYG    E DVWS G++++     GV P+   T +     + +G   +     
Sbjct: 162 APEAL--NYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG---YRMSCP 216

Query: 308 PKVSKEAKELVKNMLDPNPYNRLTLEEV 335
            K   +  ++++   D  P NR    E+
Sbjct: 217 QKCPDDVYKVMQRCWDYKPENRPKFSEL 244

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 61.2 bits (148), Expect = 3e-10
 Identities = 77/302 (25%), Positives = 124/302 (41%), Gaps = 52/302 (17%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDID-DVRREVEIMRHLP 139
           D Y   ++LG G +   ++      G+  A K I   +L+ E        RE  +++ L 
Sbjct: 5   DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVI---RLQEEEGTPFTAIREASLLKGL- 60

Query: 140 KHPNIVTYKEAYEDKDAIYLVME-----LCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           KH NIV   +    K+ + LV E     LC+     D+  + G             +LR 
Sbjct: 61  KHANIVLLHDIIHTKETLTLVFEYVHTDLCQ---YMDK--HPGGLHPENVKLFLFQLLRG 115

Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAP 253
           +   H+  ++HRDLKP+N L +D  E   LK  DFGL+     P   +   V + +Y  P
Sbjct: 116 LSYIHQRYILHRDLKPQNLLISDTGE---LKLADFGLARAKSVPSHTYSNEVVTLWYRPP 172

Query: 254 EVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA--------------------ETEEGI 291
           +VL     Y   +D+W  G I   ++ GV  F                      +T  G+
Sbjct: 173 DVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGV 232

Query: 292 AHAIIRGKID-FE-------RDPWPKVS--KEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
            H++   K + F        R  W K+S    A++L   +L   P NRL+ +  L + + 
Sbjct: 233 -HSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYF 291

Query: 342 KN 343
            +
Sbjct: 292 SD 293

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 60.3 bits (146), Expect = 4e-10
 Identities = 67/273 (24%), Positives = 106/273 (38%), Gaps = 46/273 (16%)

Query: 89  LGRGEFGITHQCFEI-ETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRHLPKHPNI 144
           LG G FG  ++       G      ++A + L+   T+ +  +  +E  +M +   HPNI
Sbjct: 3   LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNF-NHPNI 61

Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKT-----------ILR 193
           V         +  Y++MEL EGG+L         Y   A                   L 
Sbjct: 62  VKLLGVCLLNEPQYIIMELMEGGDLL-------SYLRDARVERFGPPLLTLKELLDICLD 114

Query: 194 IVKVCH---ENGVMHRDLKPENFLFA--DGSENSQLKAIDFGLS-------IFFKPGEQF 241
           + K C    +   +HRDL   N L +      +  +K  DFGL+        + K GE  
Sbjct: 115 VAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGL 174

Query: 242 CEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVPPFWAETE-EGIAHAIIRG 298
             +     +MAPE L    +  + DVWS GV+++ IL  G  P+ A    E + H    G
Sbjct: 175 LPV----RWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGG 230

Query: 299 KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLT 331
           ++            +  +L+ N    +P  R T
Sbjct: 231 RL----QKPENCPDKIYQLMTNCWAQDPSERPT 259

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 60.8 bits (147), Expect = 7e-10
 Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 35/211 (16%)

Query: 73  NPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
             A  +IL+ +T G E      G    C + +T E    K   +    TE          
Sbjct: 90  EKAGFSILETFTPGAE------GFAFACIDNKTCEHVVIKAGQRGGTATE---------A 134

Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
            I+R +  HP+I+  K  +       L++   +  +L+  +  K +       A+ +++L
Sbjct: 135 HILRAI-NHPSIIQLKGTFTYNKFTCLILPRYKT-DLYCYLAAKRNIAICDILAIERSVL 192

Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY-- 250
           R ++  HEN ++HRD+K EN +F +   +  L   DFG + F  P     +I  + YY  
Sbjct: 193 RAIQYLHENRIIHRDIKAEN-IFINHPGDVCLG--DFGAACF--P----VDINANKYYGW 243

Query: 251 ------MAPEVLRRN-YGPEIDVWSAGVIIY 274
                  APE+L R+ YGP +D+WSAG++++
Sbjct: 244 AGTIATNAPELLARDPYGPAVDIWSAGIVLF 274

Length = 391

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 59.5 bits (144), Expect = 9e-10
 Identities = 59/260 (22%), Positives = 114/260 (43%), Gaps = 23/260 (8%)

Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           +LG G++G  ++    +   T A K + ++ ++    +++  +E  +M+ + KHPN+V  
Sbjct: 13  KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME----VEEFLKEAAVMKEI-KHPNLVQL 67

Query: 148 KEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHENGVMH 205
                 +   Y++ E    G L D  R  N+          +   I   ++   +   +H
Sbjct: 68  LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 127

Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRN-YG 261
           RDL   N L     EN  +K  DFGLS     G+ +    G+ +   + APE L  N + 
Sbjct: 128 RDLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFS 183

Query: 262 PEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID--FERDPWPKVSKEAKELV 318
            + DVW+ GV+++ I   G+ P+      GI  + +   ++  +  +       +  EL+
Sbjct: 184 IKSDVWAFGVLLWEIATYGMSPY-----PGIDLSQVYELLEKGYRMERPEGCPPKVYELM 238

Query: 319 KNMLDPNPYNRLTLEEVLEN 338
           +     NP +R +  E+ + 
Sbjct: 239 RACWQWNPSDRPSFAEIHQA 258

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 58.9 bits (143), Expect = 2e-09
 Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 32/214 (14%)

Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           E+GRG FG  ++     +G   A K+I     + E     +  +++++      P IV +
Sbjct: 11  EIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQK--RLLMDLDVVMRSSDCPYIVKF 68

Query: 148 KEA-YEDKDAIYLVMELCEGG-ELFDRIV---NKGHYTERAAAAVGKTILRIVKVCH--- 199
             A + + D  ++ MEL +   + F + V    K    E     +GK  +  VK  +   
Sbjct: 69  YGALFREGDC-WICMELMDISLDKFYKYVYEVLKSVIPEEI---LGKIAVATVKALNYLK 124

Query: 200 -ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI-----VGSPYYMAP 253
            E  ++HRD+KP N L  D + N  +K  DFG+S     G+    I      G   YMAP
Sbjct: 125 EELKIIHRDVKPSNILL-DRNGN--IKLCDFGIS-----GQLVDSIAKTRDAGCRPYMAP 176

Query: 254 EVL----RRNYGPEIDVWSAGVIIYILLCGVPPF 283
           E +    R  Y    DVWS G+ +Y +  G  P+
Sbjct: 177 ERIDPSARDGYDVRSDVWSLGITLYEVATGKFPY 210

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 58.9 bits (142), Expect = 2e-09
 Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 29/229 (12%)

Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           D+   GK LG G FG  +  +   ++  +     K+A + LK   TE D+ D+  E+E+M
Sbjct: 18  DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 77

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-----------VNKGHYTERAA 184
           + + KH NI+    A      +Y+++E    G L + +            N     E   
Sbjct: 78  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQL 137

Query: 185 A-----AVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           +     +    + R ++       +HRDL   N L    +E++ +K  DFGL+      +
Sbjct: 138 SFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 194

Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 195 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 243

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 59.3 bits (143), Expect = 2e-09
 Identities = 59/229 (25%), Positives = 101/229 (44%), Gaps = 31/229 (13%)

Query: 82  KYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMR 136
           + T GK LG G FG  +  +   I+  +      +A + LK   T+ D+ D+  E+E+M+
Sbjct: 13  RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMK 72

Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGEL---------------FD--RIVNKGHY 179
            + KH NI+    A      +Y+++E    G L               FD  ++  +   
Sbjct: 73  MIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEE-QL 131

Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           T +   +    + R ++       +HRDL   N L    +E++ +K  DFGL+      +
Sbjct: 132 TFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLV---TEDNVMKIADFGLARDVHNID 188

Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 189 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPY 237

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 57.7 bits (139), Expect = 3e-09
 Identities = 62/233 (26%), Positives = 98/233 (42%), Gaps = 42/233 (18%)

Query: 87  KELGRGEFGITHQCF--EIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNI 144
           + +GRG FG   + F   +    T    K  +E L  ++      +E  I++    HPNI
Sbjct: 1   ERIGRGNFG---EVFSGRLRADNTPVAVKSCRETLPPDLK-AKFLQEARILKQY-SHPNI 55

Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV-------KV 197
           V        K  IY+VMEL +GG+    +  +G   +       K ++++V       + 
Sbjct: 56  VRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKV------KELIQMVENAAAGMEY 109

Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP--------Y 249
                 +HRDL   N L    +E + LK  DFG+S      E+   +  S          
Sbjct: 110 LESKHCIHRDLAARNCLV---TEKNVLKISDFGMS-----REEEDGVYASTGGMKQIPVK 161

Query: 250 YMAPEVLRRNYG---PEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           + APE L  NYG    E DVWS G++++     G  P+   + +    AI +G
Sbjct: 162 WTAPEAL--NYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG 212

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 57.8 bits (140), Expect = 4e-09
 Identities = 62/237 (26%), Positives = 96/237 (40%), Gaps = 45/237 (18%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMR 136
            D+ T GK LG G FG   +   +          +A + LK   TE D+ D+  E+E+M+
Sbjct: 11  RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMK 70

Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFD----------------RIVNKGHYT 180
            + KH NI+        +  +Y+V+E    G L D                    +   T
Sbjct: 71  MIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLT 130

Query: 181 ERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ 240
           ++   +    + R ++       +HRDL   N L    +E+  +K  DFGL+        
Sbjct: 131 QKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV---TEDHVMKIADFGLAR------- 180

Query: 241 FCEIVGSPYY------------MAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
             +I    YY            MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 181 --DIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPY 235

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 58.0 bits (140), Expect = 7e-09
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 7/94 (7%)

Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---F 241
            AV + +L  +   H  G++HRD+K EN +  +G E+  L   DFG + F +        
Sbjct: 263 TAVARQLLSAIDYIHGEGIIHRDIKTEN-VLVNGPEDICLG--DFGAACFARGSWSTPFH 319

Query: 242 CEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIY 274
             I G+    APEVL  + Y P +D+WSAG++I+
Sbjct: 320 YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIF 353

Length = 461

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 56.2 bits (135), Expect = 1e-08
 Identities = 72/277 (25%), Positives = 118/277 (42%), Gaps = 38/277 (13%)

Query: 84  TFGKELGRGEFG-ITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
            F   +G G FG +     + +  +  A  K+ KE   +E D  D   E+E++  L  HP
Sbjct: 5   KFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKE-FASENDHRDFAGELEVLCKLGHHP 63

Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFD-----RIVN------KGHYTERAAAAVGKTI 191
           NI+    A E++  +Y+ +E    G L D     R++       K H T  A+    + +
Sbjct: 64  NIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGT--ASTLTSQQL 121

Query: 192 LRI-------VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC-- 242
           L+        ++   E   +HRDL   N L  +   N   K  DFGLS     GE+    
Sbjct: 122 LQFASDVATGMQYLSEKQFIHRDLAARNVLVGE---NLASKIADFGLS----RGEEVYVK 174

Query: 243 EIVGS-PY-YMAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           + +G  P  +MA E L  + Y  + DVWS GV+++ I+  G  P+   T   +   + +G
Sbjct: 175 KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 234

Query: 299 KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEV 335
              +  +       E  EL++      PY R    ++
Sbjct: 235 ---YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQI 268

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 56.8 bits (137), Expect = 2e-08
 Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 4/153 (2%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++++   K + RG FG  +   +    + YA K + K  +  +  +  V+ E + +  L 
Sbjct: 3   IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALA-LS 61

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           K P IV    + +  + +YLVME   GG++   +   G++ E  A      +   +   H
Sbjct: 62  KSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLH 121

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLS 232
            +G++HRDLKP+N L    S    +K  DFGLS
Sbjct: 122 RHGIIHRDLKPDNMLI---SNEGHIKLTDFGLS 151

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 55.3 bits (133), Expect = 2e-08
 Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 16/221 (7%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           TF KELG G+FG+    +    G+     K+ KE   +E   D+   E ++M  L  H  
Sbjct: 7   TFLKELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMKL-SHEK 60

Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA-AAVGKTILRIVKVCHENG 202
           +V        +  IY+V E    G L + +   G   + +    + K +   +       
Sbjct: 61  LVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQ 120

Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR- 258
            +HRDL   N L  D      +K  DFGLS +    +++   VGS +   +  PEVL   
Sbjct: 121 FIHRDLAARNCLVDD---QGCVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLLYS 176

Query: 259 NYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
            +  + DVW+ GV+++ +   G  P+           + +G
Sbjct: 177 KFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQG 217

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 55.5 bits (134), Expect = 2e-08
 Identities = 66/301 (21%), Positives = 114/301 (37%), Gaps = 71/301 (23%)

Query: 80  LDKYTFGKELGRGEFGITH--QCFEIETGETYACKKIAKEKLKTEIDID---DVRREVEI 134
            D     +ELG G FG     +C+ +E       + +A + LK     D   D  RE E+
Sbjct: 4   RDTIVLKRELGEGAFGKVFLGECYHLEPEN--DKELVAVKTLKETASNDARKDFEREAEL 61

Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGEL----------FDRIVNKGHYTER-- 182
           + +  +H NIV +     + D   +V E  E G+L             + +         
Sbjct: 62  LTNF-QHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELT 120

Query: 183 -----------AAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL 231
                      A+  V       V         HRDL   N L      +  +K  DFG+
Sbjct: 121 LSQLLQIAVQIASGMVYLASQHFV---------HRDLATRNCLVGY---DLVVKIGDFGM 168

Query: 232 SIFFKPGEQFCEIVGSPYY------------MAPE-VLRRNYGPEIDVWSAGVIIY-ILL 277
           S          ++  + YY            M PE ++ R +  E DVWS GV+++ I  
Sbjct: 169 SR---------DVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFT 219

Query: 278 CGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV-SKEAKELVKNMLDPNPYNRLTLEEVL 336
            G  P++  + E +   I +G++  +R   P+    E  +++      +P  R+ ++++ 
Sbjct: 220 YGKQPWYGLSNEEVIECITQGRL-LQR---PRTCPSEVYDIMLGCWKRDPQQRINIKDIH 275

Query: 337 E 337
           E
Sbjct: 276 E 276

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 55.7 bits (134), Expect = 2e-08
 Identities = 57/229 (24%), Positives = 99/229 (43%), Gaps = 29/229 (12%)

Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           D+   GK LG G FG  +  + + I+         +A + LK   T+ D+ D+  E+E+M
Sbjct: 12  DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELM 71

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGEL---------------FDRI-VNKGHY 179
           + + KH NI+        +  +Y+++E    G L               FD   V +   
Sbjct: 72  KLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQL 131

Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           + +   +    + R ++       +HRDL   N L     E++ +K  DFGL+      +
Sbjct: 132 SFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVT---EDNVMKIADFGLARGVHDID 188

Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS G++++ I   G  P+
Sbjct: 189 YYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPY 237

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 54.5 bits (131), Expect = 3e-08
 Identities = 55/228 (24%), Positives = 91/228 (39%), Gaps = 25/228 (10%)

Query: 105 TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELC 164
           T +T+  K + K    +   +  +   V         PN+V   +    +D+++LV++  
Sbjct: 17  TQQTFILKGLRKSSEYSRERLTIIPHCV---------PNMVCLHKYIVSEDSVFLVLQHA 67

Query: 165 EGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQL 224
           EGG+L+  I    +  E         ++  +   H  G++ RDL P N L  D   + QL
Sbjct: 68  EGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILL-DDRGHIQL 126

Query: 225 KAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPE-IDVWSAGVIIYILLCGVPPF 283
                  S + +  +          Y APEV   +   E  D WS G I++ LL G    
Sbjct: 127 TY----FSRWSEVEDSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLV 182

Query: 284 WAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKELVKNMLDPNPYNRL 330
                    H  +           P+ VS+EA+ L++ +L  NP  RL
Sbjct: 183 ECHPSGINTHTTLN---------IPEWVSEEARSLLQQLLQFNPTERL 221

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 55.7 bits (134), Expect = 3e-08
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 4/97 (4%)

Query: 182 RAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF 241
             A  + K IL  ++  H   ++HRD+K EN    D     Q+   D G + F      F
Sbjct: 157 DQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIND---VDQVCIGDLGAAQFPVVAPAF 213

Query: 242 CEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILL 277
             + G+    APEVL R+ Y  + D+WSAG++++ +L
Sbjct: 214 LGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEML 250

Length = 357

>gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair

 Score = 49.8 bits (120), Expect = 3e-08
 Identities = 19/53 (35%), Positives = 31/53 (58%)

Query: 400 KNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL 452
           + G +T EELK  L ++G  +S+ +V +L    D DG+G +S +EF  +   L
Sbjct: 1   EKGLITREELKRALALLGISLSEEEVDILFREFDTDGDGKISFEEFCVLLQRL 53

Length = 53

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 54.4 bits (131), Expect = 4e-08
 Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 28/204 (13%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE--IDIDDVRREVEIMRHLPK 140
           +T  ++LG G FG      E+  G      ++A + LK++  +   D ++EV+ ++ L +
Sbjct: 8   FTLERKLGSGYFG------EVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRL-R 60

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELF-------DRIVNKGHYTERAA-AAVGKTIL 192
           H ++++        + +Y++ EL E G L         +++      + A   A G   L
Sbjct: 61  HKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYL 120

Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY-YM 251
                  E   +HRDL   N L     E+   K  DFGL+   K           PY + 
Sbjct: 121 E------EQNSIHRDLAARNILVG---EDLVCKVADFGLARLIKEDVYLSSDKKIPYKWT 171

Query: 252 APEVL-RRNYGPEIDVWSAGVIIY 274
           APE      +  + DVWS G+++Y
Sbjct: 172 APEAASHGTFSTKSDVWSFGILLY 195

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 54.2 bits (130), Expect = 4e-08
 Identities = 55/194 (28%), Positives = 82/194 (42%), Gaps = 11/194 (5%)

Query: 87  KELGRGEFG-ITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV 145
            ELG G FG +    ++++  E     KI K         D++ RE  +M+ L  +P IV
Sbjct: 1   GELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQL-DNPYIV 59

Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMH 205
                 E  ++  LVMEL E G L   +    H TE+    +   +   +K   E   +H
Sbjct: 60  RMIGICE-AESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVH 118

Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS---PY-YMAPEVLR-RNY 260
           RDL   N L          K  DFGLS      E + +       P  + APE +    +
Sbjct: 119 RDLAARNVLLV---TQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKF 175

Query: 261 GPEIDVWSAGVIIY 274
             + DVWS GV+++
Sbjct: 176 SSKSDVWSFGVLMW 189

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 54.3 bits (130), Expect = 5e-08
 Identities = 65/270 (24%), Positives = 106/270 (39%), Gaps = 34/270 (12%)

Query: 89  LGRGEFGITHQCFEIETG-ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           +G G FG   +    + G    A  K  KE   ++ D  D   E+E++  L  HPNI+  
Sbjct: 3   IGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNIINL 61

Query: 148 KEAYEDKDAIYLVMELCEGGELFD-----RIVNKGHYTER----AAAAVGKTILRI---- 194
             A E +  +YL +E    G L D     R++            A+    + +L      
Sbjct: 62  LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 121

Query: 195 ---VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS----IFFKPGEQFCEIVGS 247
              +    +   +HRDL   N L     EN   K  DFGLS    ++ K       +   
Sbjct: 122 ARGMDYLSQKQFIHRDLAARNILVG---ENYVAKIADFGLSRGQEVYVKKTMGRLPV--- 175

Query: 248 PYYMAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERD 305
             +MA E L  + Y    DVWS GV+++ I+  G  P+   T   +   + +G   +  +
Sbjct: 176 -RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YRLE 231

Query: 306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEV 335
                  E  +L++      PY R +  ++
Sbjct: 232 KPLNCDDEVYDLMRQCWREKPYERPSFAQI 261

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 54.2 bits (130), Expect = 5e-08
 Identities = 55/196 (28%), Positives = 90/196 (45%), Gaps = 29/196 (14%)

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           +G+GEFG      ++  G+ Y   K+A + +K +        E  +M  L +H N+V   
Sbjct: 14  IGKGEFG------DVMLGD-YRGNKVAVKCIKNDATAQAFLAEASVMTQL-RHSNLVQLL 65

Query: 149 EA-YEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI-VKVC------HE 200
               E+K  +Y+V E    G L D + ++G      +   G  +L+  + VC        
Sbjct: 66  GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-----SVLGGDCLLKFSLDVCEAMEYLEA 120

Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY-YMAPEVLR-R 258
           N  +HRDL   N L    SE++  K  DFGL+   K      +    P  + APE LR +
Sbjct: 121 NNFVHRDLAARNVLV---SEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREK 174

Query: 259 NYGPEIDVWSAGVIIY 274
            +  + DVWS G++++
Sbjct: 175 KFSTKSDVWSFGILLW 190

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 53.8 bits (129), Expect = 6e-08
 Identities = 67/229 (29%), Positives = 98/229 (42%), Gaps = 30/229 (13%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
           K +G GEFG      E+ +G      K    +A + LK   TE    D   E  IM    
Sbjct: 10  KVIGAGEFG------EVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQF- 62

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
            HPNI+  +        + +V E  E G L D  + K  G +T      + + I   +K 
Sbjct: 63  DHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DAFLRKHDGQFTVIQLVGMLRGIASGMKY 121

Query: 198 CHENGVMHRDLKPENFLFADGSENSQL--KAIDFGLSIFFK--PGEQFCEIVGS-PY-YM 251
             + G +HRDL   N L      NS L  K  DFGLS   +  P   +    G  P  + 
Sbjct: 122 LSDMGYVHRDLAARNILV-----NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 176

Query: 252 APEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           APE +  R +    DVWS G++++ ++  G  P+W  + + +  AI  G
Sbjct: 177 APEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG 225

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 54.5 bits (131), Expect = 8e-08
 Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 35/213 (16%)

Query: 106 GETYACKKIAKEK-----LKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV 160
           GE + C K   E+     +K         RE++I++ +  H  I+    AY  K  + +V
Sbjct: 106 GEVFVCTKHGDEQRKKVIVKAVTGGKTPGREIDILKTI-SHRAIINLIHAYRWKSTVCMV 164

Query: 161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSE 220
           M   +  +LF  +   G      A  + + +L  +   H  G++HRD+K EN +F D  E
Sbjct: 165 MPKYKC-DLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTEN-IFLDEPE 222

Query: 221 NSQLKAIDFGLSIFFKPGEQFCEIVGSPY------------YMAPEVLRRN-YGPEIDVW 267
           N+ L   DFG +         C++   P               +PE+L  + Y  + D+W
Sbjct: 223 NAVLG--DFGAA---------CKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIW 271

Query: 268 SAGVIIYILLCGVPPFWAETEEGIAH---AIIR 297
           SAG++++ +       + +  +  +    +IIR
Sbjct: 272 SAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIR 304

Length = 392

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 53.5 bits (128), Expect = 1e-07
 Identities = 71/282 (25%), Positives = 116/282 (41%), Gaps = 50/282 (17%)

Query: 87  KELGRGEFG--ITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNI 144
           +ELG G FG     +C+ +   +      +   K  T     D +RE E++ +L +H +I
Sbjct: 11  RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL-QHEHI 69

Query: 145 VTYKEAYEDKDAIYLVMELCEGGEL--FDR-------IVNKGHYTERAAAAVGKTILRIV 195
           V +     D D + +V E  + G+L  F R       I+  G   +         +L I 
Sbjct: 70  VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 129

Query: 196 KVCHENGV-------MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
                  V       +HRDL   N L      N  +K  DFG+S          ++  + 
Sbjct: 130 SQIASGMVYLASQHFVHRDLATRNCLVGA---NLLVKIGDFGMSR---------DVYSTD 177

Query: 249 YY------------MAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHA 294
           YY            M PE ++ R +  E DVWS GVI++ I   G  P++  +   +   
Sbjct: 178 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIEC 237

Query: 295 IIRGKIDFERDPWPKV-SKEAKELVKNMLDPNPYNRLTLEEV 335
           I +G++  ER   P+V  KE  +++       P  RL ++E+
Sbjct: 238 ITQGRV-LER---PRVCPKEVYDIMLGCWQREPQQRLNIKEI 275

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 52.3 bits (126), Expect = 2e-07
 Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 34/204 (16%)

Query: 86  GKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNI 144
            ++LG G+FG      E+  G      K+A + LK   +  +   +E +IM+ L +H  +
Sbjct: 11  ERKLGAGQFG------EVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKL-RHDKL 63

Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVN-KGHYTE-------RAAAAVGKTILRIVK 196
           V       +++ IY+V E    G L D + + +G            A  A G   L    
Sbjct: 64  VQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE--- 120

Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAP 253
                  +HRDL   N L     EN   K  DFGL+   +  E +    G+ +   + AP
Sbjct: 121 ---SRNYIHRDLAARNILV---GENLVCKIADFGLARLIEDDE-YTAREGAKFPIKWTAP 173

Query: 254 EVLRRNYGP---EIDVWSAGVIIY 274
           E    NYG    + DVWS G+++ 
Sbjct: 174 EAA--NYGRFTIKSDVWSFGILLT 195

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 52.3 bits (126), Expect = 2e-07
 Identities = 62/224 (27%), Positives = 94/224 (41%), Gaps = 21/224 (9%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRHLPKHPN 143
           K +G GEFG   +      G+      +A + LK   ++    D   E  IM     HPN
Sbjct: 10  KVIGGGEFGEVCRGRLKLPGKK--EIDVAIKTLKAGSSDKQRLDFLTEASIMGQF-DHPN 66

Query: 144 IVTYKEAYEDKDAIYLVMELCEGGEL--FDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           I+  +        + ++ E  E G L  F R  N G +T      + + I   +K   E 
Sbjct: 67  IIRLEGVVTKSRPVMIITEYMENGSLDKFLR-ENDGKFTVGQLVGMLRGIASGMKYLSEM 125

Query: 202 GVMHRDLKPENFLFADGSENSQL--KAIDFGLSIFFKPGEQFCEIVG--SPY-YMAPEVL 256
             +HRDL   N L      NS L  K  DFGLS   +  E      G   P  + APE +
Sbjct: 126 NYVHRDLAARNILV-----NSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAI 180

Query: 257 R-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
             R +    DVWS G++++ ++  G  P+W  + + +  A+  G
Sbjct: 181 AYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDG 224

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 32/144 (22%), Positives = 54/144 (37%), Gaps = 18/144 (12%)

Query: 95  GITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH----PNIVTYKEA 150
           G+T++ + + T +      + K    +     D  REV I++ L +     P ++     
Sbjct: 9   GLTNRVYLLGTKDE---DYVLK-INPSREKGADREREVAILQLLARKGLPVPKVLAS--- 61

Query: 151 YEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKP 210
            E     YL+ME  EG  L +         +   A     +L  +       + H DL P
Sbjct: 62  GESDGWSYLLMEWIEGETLDEV----SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHP 117

Query: 211 ENFLFADGSENSQLKAIDFGLSIF 234
            N L  DG     L  ID+  + +
Sbjct: 118 GNILVDDG---KILGIIDWEYAGY 138

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 51.0 bits (122), Expect = 5e-07
 Identities = 75/270 (27%), Positives = 116/270 (42%), Gaps = 40/270 (14%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIV 145
           K+LG G+FG      E+  G      K+A + LK   +  +    E  +M+ L +HP +V
Sbjct: 12  KKLGAGQFG------EVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQL-QHPRLV 64

Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTE-----RAAAAVGKTILRIVKVCH 199
               A   ++ IY++ E  E G L D +   +G           AA + + +  I     
Sbjct: 65  RL-YAVVTQEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFI----E 119

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVL 256
               +HRDL+  N L    SE    K  DFGL+   +  E +    G+ +   + APE +
Sbjct: 120 RKNYIHRDLRAANILV---SETLCCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI 175

Query: 257 RRNYGP---EIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VS 311
             NYG    + DVWS G+++  I+  G  P+   T   +   + RG     R P P    
Sbjct: 176 --NYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGY----RMPRPDNCP 229

Query: 312 KEAKELVKNMLDPNPYNRLTLE---EVLEN 338
           +E  EL++      P  R T E    VLE+
Sbjct: 230 EELYELMRLCWKEKPEERPTFEYLRSVLED 259

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 50.7 bits (121), Expect = 9e-07
 Identities = 72/302 (23%), Positives = 122/302 (40%), Gaps = 53/302 (17%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKK------------IAKEKLKTEIDID-- 126
            + TF ++LG G+FG  H C E E  E +  K             +A + L+ + + +  
Sbjct: 5   KRLTFKEKLGEGQFGEVHLC-EAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNAR 63

Query: 127 -DVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGEL---FDRIVNKGHYTER 182
            D  +E++IM  L K PNI+         D + ++ E  E G+L     R   +    + 
Sbjct: 64  NDFLKEIKIMSRL-KDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKA 122

Query: 183 AAAAVGKTILRIVKVCHENGV--------MHRDLKPENFLFADGSENSQLKAIDFGLSIF 234
               +  + L  +     +G+        +HRDL   N L     +N  +K  DFG+S  
Sbjct: 123 DVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVG---KNYTIKIADFGMSRN 179

Query: 235 FKPGEQFCEIVGSPY----YMAPE-VLRRNYGPEIDVWSAGVIIY--ILLCGVPPFWAET 287
              G+ +  I G       +M+ E +L   +    DVW+ GV ++  + LC   P+   +
Sbjct: 180 LYSGDYY-RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLS 238

Query: 288 EEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHA 347
           +E     +I    +F RD           L K  L P+   +L L     + W +N    
Sbjct: 239 DE----QVIENTGEFFRD-----QGRQVYLPKPALCPDSLYKLML-----SCWRRNAKER 284

Query: 348 PN 349
           P+
Sbjct: 285 PS 286

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 50.5 bits (120), Expect = 1e-06
 Identities = 55/243 (22%), Positives = 98/243 (40%), Gaps = 42/243 (17%)

Query: 87  KELGRGEFG--ITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNI 144
           +ELG G FG     +C+ +   +      +   K  ++    D  RE E++ +L +H +I
Sbjct: 11  RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHI 69

Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG-------------HYTERAAAAVGKTI 191
           V +     + D + +V E  + G+L   +   G               T+     + + I
Sbjct: 70  VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQI 129

Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY- 250
              +        +HRDL   N L     EN  +K  DFG+S          ++  + YY 
Sbjct: 130 AAGMVYLASQHFVHRDLATRNCLVG---ENLLVKIGDFGMSR---------DVYSTDYYR 177

Query: 251 -----------MAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIR 297
                      M PE ++ R +  E DVWS GV+++ I   G  P++  +   +   I +
Sbjct: 178 VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ 237

Query: 298 GKI 300
           G++
Sbjct: 238 GRV 240

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 50.4 bits (120), Expect = 1e-06
 Identities = 67/278 (24%), Positives = 106/278 (38%), Gaps = 40/278 (14%)

Query: 85  FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHLPKH 141
           F   +G G FG   Q  +    +       A +++K     DD R    E+E++  L  H
Sbjct: 11  FQDVIGEGNFG---QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 67

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAA---------------- 185
           PNI+    A E +  +YL +E    G L D  + K    E   A                
Sbjct: 68  PNIINLLGACEHRGYLYLAIEYAPHGNLLD-FLRKSRVLETDPAFAIANSTASTLSSQQL 126

Query: 186 -AVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS----IFFKPGEQ 240
                 + R +    +   +HRDL   N L     EN   K  DFGLS    ++ K    
Sbjct: 127 LHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYVAKIADFGLSRGQEVYVKKTMG 183

Query: 241 FCEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
              +     +MA E L  + Y    DVWS GV+++ I+  G  P+   T   +   + +G
Sbjct: 184 RLPV----RWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG 239

Query: 299 KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVL 336
              +  +       E  +L++      PY R +  ++L
Sbjct: 240 ---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 274

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 3/54 (5%)

Query: 472 QSGFIEVDELKEVLLEDNAGPN-GDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           + G I  +ELK  L     G +  ++ +  + R+ D D DG+ISFEEF  ++  
Sbjct: 1   EKGLITREELKRAL--ALLGISLSEEEVDILFREFDTDGDGKISFEEFCVLLQR 52

Length = 53

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 49.7 bits (119), Expect = 2e-06
 Identities = 57/215 (26%), Positives = 88/215 (40%), Gaps = 18/215 (8%)

Query: 85  FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID---IDDVRREVEIMRHLPKH 141
             K LG G FG  ++   I  GE      +A + L+ E       ++  E  +M  +  H
Sbjct: 11  KIKVLGSGAFGTVYKGVWIPEGEK-VKIPVAIKVLREETSPKANKEILDEAYVMASV-DH 68

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHE 200
           P++V           + L+ +L   G L D + N K +   +        I + +    E
Sbjct: 69  PHVVRLLGICLSS-QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEE 127

Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPE-VL 256
             ++HRDL   N L         +K  DFGL+      E+     G      +MA E +L
Sbjct: 128 KRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESIL 184

Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGI 291
            R Y  + DVWS GV ++ L+     F A+  EGI
Sbjct: 185 HRIYTHKSDVWSYGVTVWELMT----FGAKPYEGI 215

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 49.6 bits (118), Expect = 2e-06
 Identities = 60/239 (25%), Positives = 96/239 (40%), Gaps = 46/239 (19%)

Query: 82  KYTFGKELGRGEFGITHQCFEIE----TGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
               GK LG GEFG   +          G T    K+ KE   +  ++ D+  E  +++ 
Sbjct: 1   NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKEN-ASSSELRDLLSEFNLLKQ 59

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGEL--FDRIVNK------GHYTERA------ 183
           +  HP+++    A      + L++E  + G L  F R   K      G    R       
Sbjct: 60  V-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDN 118

Query: 184 ----AAAVGKTILRIVKVCH------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLS- 232
               A  +G  I    ++        E  ++HRDL   N L A+G    ++K  DFGLS 
Sbjct: 119 PDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEG---RKMKISDFGLSR 175

Query: 233 ------IFFKPGEQFCEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVPPF 283
                  + K  +    +     +MA E L  + Y  + DVWS GV+++ I+  G  P+
Sbjct: 176 DVYEEDSYVKRSKGRIPV----KWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 230

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 48.9 bits (116), Expect = 3e-06
 Identities = 54/248 (21%), Positives = 98/248 (39%), Gaps = 44/248 (17%)

Query: 80  LDKYTFGKELGRGEFGITHQ--CFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           L    F +ELG   FG  ++   F    GE      I   K K E  + +  +   +MR 
Sbjct: 4   LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRS 63

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI------ 191
             +HPNIV        +  + ++   C   +L + +V +  +++  +    KT+      
Sbjct: 64  RLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEP 123

Query: 192 ---LRIV-------KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF 241
              + IV       +    + V+H+DL   N L  D      +K  D GL         F
Sbjct: 124 ADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD---KLNVKISDLGL---------F 171

Query: 242 CEIVGSPYY------------MAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPFWAET 287
            E+  + YY            M+PE ++   +  + D+WS GV+++ +   G+ P+   +
Sbjct: 172 REVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS 231

Query: 288 EEGIAHAI 295
            + +   I
Sbjct: 232 NQDVIEMI 239

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|237847 PRK14879, PRK14879, serine/threonine protein kinase; Provisional

 Score = 47.2 bits (113), Expect = 6e-06
 Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 17/110 (15%)

Query: 129 RREVEIMRHLPKH----PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
           RRE  IM    K     P +        +   I  VME  EG  L D ++N         
Sbjct: 47  RREARIMSRARKAGVNVPAVY---FVDPENFII--VMEYIEGEPLKD-LINSN---GMEE 97

Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF 234
             + + I R+V   H  G++H DL   N + + G    ++  IDFGL+ F
Sbjct: 98  LELSREIGRLVGKLHSAGIIHGDLTTSNMILSGG----KIYLIDFGLAEF 143

Length = 211

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 47.7 bits (113), Expect = 6e-06
 Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 23/222 (10%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIV 145
           K+LG G+FG      E+  G      K+A + LK   + +     E  +M+ L +H  +V
Sbjct: 12  KKLGAGQFG------EVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTL-QHDKLV 64

Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGV 203
                   ++ IY++ E    G L D + +   G             I   +        
Sbjct: 65  RLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY 124

Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRNY 260
           +HRDL+  N L    SE+   K  DFGL+   +  E +    G+ +   + APE +  N+
Sbjct: 125 IHRDLRAANVLV---SESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI--NF 178

Query: 261 GP---EIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           G    + DVWS G+++Y I+  G  P+   +   +  A+ RG
Sbjct: 179 GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG 220

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair

 Score = 43.1 bits (102), Expect = 9e-06
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 4/59 (6%)

Query: 394 YMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKM----LMEAADVDGNGLLSCDEFVTM 448
            ++D D +G +  EEL+  L  +G K++D +V+          D DG+G +S +EF+  
Sbjct: 1   KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEA 59

Length = 60

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 47.6 bits (113), Expect = 9e-06
 Identities = 66/264 (25%), Positives = 106/264 (40%), Gaps = 55/264 (20%)

Query: 85  FGKELGRGEFGITHQC--------------FEIETGETY--ACKKIAKEKLKTEIDIDDV 128
           F ++LG G+FG  H C              F +  G     A K +  +  K   +  D 
Sbjct: 9   FKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARN--DF 66

Query: 129 RREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA-- 186
            +EV+I+  L K PNI+       D+D + ++ E  E G+L ++ ++  H  ++      
Sbjct: 67  LKEVKILSRL-KDPNIIRLLGVCVDEDPLCMITEYMENGDL-NQFLSSHHLDDKEENGND 124

Query: 187 ------------------VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID 228
                             V   I   +K       +HRDL   N L     EN  +K  D
Sbjct: 125 AVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVG---ENLTIKIAD 181

Query: 229 FGLSIFFKPGEQFCEIVGSPY----YMAPE-VLRRNYGPEIDVWSAGVIIY--ILLCGVP 281
           FG+S     G+ +  I G       +MA E +L   +    DVW+ GV ++  ++LC   
Sbjct: 182 FGMSRNLYAGDYY-RIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ 240

Query: 282 PFWAETEEGIAHAIIRGKIDFERD 305
           P+   T+E     +I    +F RD
Sbjct: 241 PYGELTDE----QVIENAGEFFRD 260

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 47.2 bits (112), Expect = 1e-05
 Identities = 70/283 (24%), Positives = 123/283 (43%), Gaps = 35/283 (12%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEI----DIDDVRREVEIMRHL 138
           +T G+ LG+GEFG   +        ++  +K+A + LK +I    DI++  RE   M+  
Sbjct: 1   FTLGRMLGKGEFGSVREAQLKSEDGSF--QKVAVKMLKADIFSSSDIEEFLREAACMKEF 58

Query: 139 PKHPNI-----VTYKEAYEDKDAIYLV-MELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
             HPN+     V+ +   + +  I +V +   + G+L   ++      E       +T++
Sbjct: 59  -DHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLL-MSRIGEEPFTLPLQTLV 116

Query: 193 R-IVKVC------HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIV 245
           R ++ +            +HRDL   N +     EN  +   DFGLS     G+ + +  
Sbjct: 117 RFMIDIASGMEYLSSKNFIHRDLAARNCMLN---ENMTVCVADFGLSKKIYSGDYYRQGC 173

Query: 246 GSPY---YMAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKI 300
            S     ++A E L  N Y    DVW+ GV ++ I+  G  P+       I + +I+G  
Sbjct: 174 ASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG-- 231

Query: 301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLT---LEEVLENPW 340
           +  + P P   ++  EL+     P P  R +   L + LE  W
Sbjct: 232 NRLKQP-PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELIW 273

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 46.7 bits (111), Expect = 1e-05
 Identities = 63/248 (25%), Positives = 93/248 (37%), Gaps = 46/248 (18%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKE---KLKT------EIDIDDVRRE 131
           D  T  + LG G FG      E+  G        A E    +KT      E D  D   E
Sbjct: 6   DSITLLRALGHGAFG------EVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLME 59

Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             IM     H NIV       ++   ++++EL  GG+L   +       ER ++   K +
Sbjct: 60  ALIMSKF-NHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDL 118

Query: 192 LR----IVKVCH---ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI 244
           L     + K C    EN  +HRD+   N L          K  DFG++          +I
Sbjct: 119 LFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMAR---------DI 169

Query: 245 VGSPYY------------MAPEV-LRRNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEG 290
             + YY            M PE  L   +  + DVWS GV+++ I   G  P+   T + 
Sbjct: 170 YRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE 229

Query: 291 IAHAIIRG 298
           +   +  G
Sbjct: 230 VMEFVTGG 237

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 46.1 bits (109), Expect = 2e-05
 Identities = 60/225 (26%), Positives = 92/225 (40%), Gaps = 22/225 (9%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRHLPKHPN 143
           K +G GEFG   +      G       +A + LK   TE    D   E  IM     H N
Sbjct: 11  KVIGAGEFGEVFRGILKMPGRKEV--AVAIKTLKPGYTEKQRQDFLSEASIMGQF-SHHN 67

Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIV--NKGHYTERAAAAVGKTILRIVKVCHEN 201
           I+  +          ++ E  E G L D+ +  + G ++      + + I   +K   + 
Sbjct: 68  IIRLEGVVTKFKPAMIITEYMENGAL-DKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM 126

Query: 202 GVMHRDLKPENFLFADGSENSQL--KAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAPEV 255
             +HRDL   N L      NS L  K  DFGLS   +  P   +    G  P  + APE 
Sbjct: 127 NYVHRDLAARNILV-----NSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEA 181

Query: 256 LR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           +  R +    DVWS G++++ ++  G  P+W  +   +  AI  G
Sbjct: 182 IAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDG 226

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 46.7 bits (111), Expect = 3e-05
 Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 46/209 (22%)

Query: 80  LDKYTFGKELGRGEFGITHQCF----EIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
            D +  GK+LG G FG+ ++      + +    Y  KK A E    EI +++      + 
Sbjct: 131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKK-ATEYGAVEIWMNE-----RVR 184

Query: 136 RHLPKHPNIVTYKEAY------EDKDAIYLVMELCEGGE-LFDRIVNKGH-YT------- 180
           R  P   +   +   +      + +D  +LV    EG   L D + +K   Y        
Sbjct: 185 RACPN--SCADFVYGFLEPVSSKKEDEYWLVWRY-EGESTLADLMQSKEFPYNVEPYLLG 241

Query: 181 ---------ERAAAAVGKTILRIVKVC----HENGVMHRDLKPENFLFADGSENSQLKAI 227
                    ER    +  TI+R +       H  G++HRD+KP+N +F++GS     K I
Sbjct: 242 KVQDLPKGLERENKIIQ-TIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSG--SFKII 298

Query: 228 DFGLSIFFKPGEQFC--EIVGSPYYMAPE 254
           D G +   + G  +   E +  P Y APE
Sbjct: 299 DLGAAADLRVGINYIPKEFLLDPRYAAPE 327

Length = 566

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 45.7 bits (108), Expect = 3e-05
 Identities = 52/209 (24%), Positives = 87/209 (41%), Gaps = 19/209 (9%)

Query: 86  GKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK----- 140
            K LG G FG  H+   I  G++    KI    +KT  D    +   EI  H+       
Sbjct: 12  LKLLGSGVFGTVHKGIWIPEGDSI---KIPV-AIKTIQDRSGRQTFQEITDHMLAMGSLD 67

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCH 199
           H  IV          ++ LV +L   G L D +  ++     +        I + +    
Sbjct: 68  HAYIVRLLGICPGA-SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLE 126

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPE-V 255
           E+ ++HR+L   N L      +S ++  DFG++    P ++   + E      +MA E +
Sbjct: 127 EHRMVHRNLAARNILL---KSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESI 183

Query: 256 LRRNYGPEIDVWSAGVIIYILLC-GVPPF 283
           L   Y  + DVWS GV ++ ++  G  P+
Sbjct: 184 LFGRYTHQSDVWSYGVTVWEMMSYGAEPY 212

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|197492 smart00054, EFh, EF-hand, calcium binding motif

 Score = 40.4 bits (96), Expect = 3e-05
 Identities = 11/27 (40%), Positives = 18/27 (66%)

Query: 498 IRDILRDVDLDRDGRISFEEFKAMMTS 524
           +++  R  D D DG+I FEEFK ++ +
Sbjct: 2   LKEAFRLFDKDGDGKIDFEEFKDLLKA 28

EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions. Length = 29

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 45.3 bits (107), Expect = 4e-05
 Identities = 53/195 (27%), Positives = 82/195 (42%), Gaps = 15/195 (7%)

Query: 88  ELGRGEFGITHQ-CFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           ELG G FG   +  +++   +     K+ K +   +   D++ RE EIM  L  +P IV 
Sbjct: 2   ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNE-NEKSVRDEMMREAEIMHQL-DNPYIVR 59

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMH 205
                E  +A+ LVME+  GG L   +  K    T      +   +   +K       +H
Sbjct: 60  MIGVCE-AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVH 118

Query: 206 RDLKPENFLFADGSENSQLKAI-DFGLSIFFKPGEQFCEIVGS---PY-YMAPE-VLRRN 259
           RDL   N L      N     I DFGLS      + + +   +   P  + APE +  R 
Sbjct: 119 RDLAARNVLLV----NQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRK 174

Query: 260 YGPEIDVWSAGVIIY 274
           +    DVWS G+ ++
Sbjct: 175 FSSRSDVWSYGITMW 189

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|205383 pfam13202, EF_hand_3, EF hand

 Score = 40.3 bits (96), Expect = 4e-05
 Identities = 10/25 (40%), Positives = 17/25 (68%)

Query: 498 IRDILRDVDLDRDGRISFEEFKAMM 522
           ++D+ R  D + DG+IS EE K ++
Sbjct: 1   LKDLFRQFDTNGDGKISKEELKRLL 25

Length = 25

>gnl|CDD|185503 PTZ00183, PTZ00183, centrin; Provisional

 Score = 43.5 bits (103), Expect = 5e-05
 Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 7/90 (7%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
           + +AF  FD + SG I+  ELK  +      P   + I+ ++ DVD D  G+I FEEF  
Sbjct: 19  IREAFDLFDTDGSGTIDPKELKVAMRSLGFEPK-KEEIKQMIADVDKDGSGKIDFEEFLD 77

Query: 521 MMTSGADWKMASRQYSRAMMSALSIKLFKD 550
           +MT     K+  R     ++ A    LF D
Sbjct: 78  IMTK----KLGERDPREEILKAFR--LFDD 101

Length = 158

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 45.6 bits (108), Expect = 5e-05
 Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 3/102 (2%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR---REVEIMRH 137
           D   FGK LG G FG   +      G+     ++A + LK     D+      E++I+ H
Sbjct: 38  DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSH 97

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY 179
           L +H NIV    A      + ++ E C  G+L + +  K   
Sbjct: 98  LGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAET 139

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 45.0 bits (106), Expect = 5e-05
 Identities = 70/261 (26%), Positives = 114/261 (43%), Gaps = 33/261 (12%)

Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIVT 146
           +LG+G FG      E+  G      K+A + LK   +  +   +E +IM+ L +H  +V 
Sbjct: 13  KLGQGCFG------EVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKL-RHDKLVP 65

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVN-KGHYTE-----RAAAAVGKTILRIVKVCHE 200
              A   ++ IY+V E    G L D +    G Y +       AA +   +  I ++ + 
Sbjct: 66  LY-AVVSEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNY- 123

Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPE-VL 256
              +HRDL+  N L  D   N   K  DFGL+   +  E +    G+ +   + APE  L
Sbjct: 124 ---IHRDLRAANILVGD---NLVCKIADFGLARLIEDNE-YTARQGAKFPIKWTAPEAAL 176

Query: 257 RRNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA- 314
              +  + DVWS G+++  L+  G  P+       +   + RG     R P P+   E+ 
Sbjct: 177 YGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGY----RMPCPQGCPESL 232

Query: 315 KELVKNMLDPNPYNRLTLEEV 335
            EL+K     +P  R T E +
Sbjct: 233 HELMKLCWKKDPDERPTFEYI 253

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|226168 COG3642, COG3642, Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

 Score = 44.2 bits (105), Expect = 6e-05
 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 11/82 (13%)

Query: 153 DKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPEN 212
           D D   +VME  EG  L D         E A   + + + R+V   H+ G++H DL   N
Sbjct: 70  DPDNGLIVMEYIEGELLKD-------ALEEARPDLLREVGRLVGKLHKAGIVHGDLTTSN 122

Query: 213 FLFADGSENSQLKAIDFGLSIF 234
            + + G    ++  IDFGL  F
Sbjct: 123 IILSGG----RIYFIDFGLGEF 140

Length = 204

>gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain

 Score = 43.5 bits (103), Expect = 6e-05
 Identities = 24/104 (23%), Positives = 37/104 (35%), Gaps = 18/104 (17%)

Query: 181 ERAAAAVGKTILRIVKVCHENGVMHRDLKPEN-FLFADGSENSQLKAIDFGLSIFFKPGE 239
           E    AV    L  ++  H        L   +  L  DGS   +                
Sbjct: 16  EEEIWAVCLQCLGALRELHRQAKSGNILLTWDGLLKLDGSVAFKTPEQSRP--------- 66

Query: 240 QFCEIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPP 282
                   PY+MAPEV+  ++Y  + D++S G+ +Y  L    P
Sbjct: 67  -------DPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELP 103

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176

>gnl|CDD|236586 PRK09605, PRK09605, bifunctional UGMP family protein/serine/threonine protein kinase; Validated

 Score = 45.3 bits (108), Expect = 7e-05
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 12/80 (15%)

Query: 153 DKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPEN 212
           D +   +VME   G +L D +             VG+ + ++    H+ G++H DL   N
Sbjct: 407 DPEEKTIVMEYIGGKDLKDVL----EGNPELVRKVGEIVAKL----HKAGIVHGDLTTSN 458

Query: 213 FLFADGSENSQLKAIDFGLS 232
           F+  D     +L  IDFGL 
Sbjct: 459 FIVRDD----RLYLIDFGLG 474

Length = 535

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 44.2 bits (104), Expect = 8e-05
 Identities = 65/282 (23%), Positives = 117/282 (41%), Gaps = 53/282 (18%)

Query: 88  ELGRGEFGITH--QCFEI--ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           ELG G FG     +C  +  E  +     K  KE   +E    D +RE E++  L +H +
Sbjct: 12  ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVL-QHQH 68

Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH----YTERAAAAVGK-TILRIVKVC 198
           IV +     +   + +V E    G+L   + + G            A G+ T+ +++ + 
Sbjct: 69  IVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIA 128

Query: 199 HE--NGVM--------HRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
            +  +G++        HRDL   N L     +   +K  DFG+S          +I  + 
Sbjct: 129 SQIASGMVYLASLHFVHRDLATRNCLVG---QGLVVKIGDFGMSR---------DIYSTD 176

Query: 249 YY------------MAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHA 294
           YY            M PE +L R +  E D+WS GV+++ I   G  P++  +       
Sbjct: 177 YYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIEC 236

Query: 295 IIRGKIDFERDPWPKV-SKEAKELVKNMLDPNPYNRLTLEEV 335
           I +G+ + ER   P+    E   +++      P  R+ ++++
Sbjct: 237 ITQGR-ELER---PRTCPPEVYAIMQGCWQREPQQRMVIKDI 274

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 45.1 bits (106), Expect = 9e-05
 Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 5/73 (6%)

Query: 186 AVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIV 245
            V + +L  ++  H  G++HRD+KPEN L    + + Q+K IDFG ++    G  F  + 
Sbjct: 313 GVMRQVLTGLRKLHRIGIVHRDIKPENLLV---TVDGQVKIIDFGAAVDMCTGINFNPLY 369

Query: 246 G--SPYYMAPEVL 256
           G   P Y  PE L
Sbjct: 370 GMLDPRYSPPEEL 382

Length = 507

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 44.3 bits (104), Expect = 9e-05
 Identities = 60/289 (20%), Positives = 117/289 (40%), Gaps = 51/289 (17%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---------- 130
           +K T  +ELG+G FG+ ++            K + K++ +T + I  V            
Sbjct: 6   EKITMSRELGQGSFGMVYEGI---------AKGVVKDEPETRVAIKTVNEAASMRERIEF 56

Query: 131 --EVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVG 188
             E  +M+    H ++V             ++MEL   G+L   + +     E       
Sbjct: 57  LNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAP 115

Query: 189 KTILRIVKVCHE----------NGVMHRDLKPENFLFADGSENSQLKAIDFGLS------ 232
            ++ +++++  E          N  +HRDL   N + A   E+  +K  DFG++      
Sbjct: 116 PSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVKIGDFGMTRDIYET 172

Query: 233 -IFFKPGEQFCEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEE 289
             + K G+    +     +M+PE L+   +    DVWS GV+++ I      P+   + E
Sbjct: 173 DYYRKGGKGLLPV----RWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE 228

Query: 290 GIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN 338
            +   ++ G +  + D  P +     EL++     NP  R +  E++ +
Sbjct: 229 QVLRFVMEGGLLDKPDNCPDM---LFELMRMCWQYNPKMRPSFLEIISS 274

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|200946 pfam00036, efhand, EF hand

 Score = 39.4 bits (93), Expect = 9e-05
 Identities = 11/27 (40%), Positives = 19/27 (70%)

Query: 498 IRDILRDVDLDRDGRISFEEFKAMMTS 524
           +++  ++ D D DG+ISFEEFK ++  
Sbjct: 2   LKEAFKEFDKDGDGKISFEEFKELLKK 28

The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 44.1 bits (104), Expect = 1e-04
 Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 15/103 (14%)

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPY----YMAP 253
           E   +HRDL   N L     EN  +K  DFGLS  I+      + +   +      +M P
Sbjct: 148 ERKFVHRDLATRNCLV---GENMVVKIADFGLSRNIY---SADYYKASENDAIPIRWMPP 201

Query: 254 E-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPFWAET-EEGIAH 293
           E +    Y  E DVW+ GV+++ I   G+ P++    EE I +
Sbjct: 202 ESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYY 244

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|234331 TIGR03724, arch_bud32, Kae1-associated kinase Bud32

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 30/109 (27%), Positives = 39/109 (35%), Gaps = 22/109 (20%)

Query: 129 RREVEIMRHLPKH----PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERA 183
           R E  ++    K     P +        D D   +VME  EG  L D I           
Sbjct: 45  RNEARLLSRARKAGVNTPVVYDV-----DPDNKTIVMEYIEGKPLKDVIEEGNDELLREI 99

Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS 232
              VGK         H+ G++H DL   N +  D     +L  IDFGL 
Sbjct: 100 GRLVGK--------LHKAGIVHGDLTTSNIIVRDD----KLYLIDFGLG 136

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine [Unknown function, General]. Length = 199

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 43.8 bits (103), Expect = 1e-04
 Identities = 69/260 (26%), Positives = 112/260 (43%), Gaps = 33/260 (12%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIV 145
           K+LG G+FG      E+  G      K+A + LK   +  +    E +IM+ L +H  +V
Sbjct: 12  KKLGNGQFG------EVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKL-RHDKLV 64

Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVN-KGHYTE-----RAAAAVGKTILRIVKVCH 199
               A   ++ IY+V E    G L D + + +G   +       AA V   +  I ++ +
Sbjct: 65  QLY-AVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY 123

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPE-V 255
               +HRDL+  N L  DG      K  DFGL+   +  E +    G+ +   + APE  
Sbjct: 124 ----IHRDLRSANILVGDG---LVCKIADFGLARLIEDNE-YTARQGAKFPIKWTAPEAA 175

Query: 256 LRRNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           L   +  + DVWS G+++  L+  G  P+       +   + RG     R P P+    +
Sbjct: 176 LYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY----RMPCPQDCPIS 231

Query: 315 -KELVKNMLDPNPYNRLTLE 333
             EL+      +P  R T E
Sbjct: 232 LHELMLQCWKKDPEERPTFE 251

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 44.2 bits (104), Expect = 1e-04
 Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 3/101 (2%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEI---DIDDVRREVEIMRH 137
           D    G+ LG G FG   +        + +  K+A + LK+     +   +  E++IM H
Sbjct: 37  DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSH 96

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH 178
           L  H NIV    A      IY++ E C  G+L D +    H
Sbjct: 97  LGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKH 137

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 42.7 bits (100), Expect = 3e-04
 Identities = 57/239 (23%), Positives = 99/239 (41%), Gaps = 38/239 (15%)

Query: 85  FGKELGRGEFGITHQCFEIE----------TGETYACKKIAKEKLKTEIDI---DDVRRE 131
             ++LG G+FG  H C E E                   +A + L+ ++     +D  +E
Sbjct: 9   LKEKLGEGQFGEVHLC-EAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKE 67

Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAA----AV 187
           ++IM  L K+PNI+         D + ++ E  E G+L   +  +   +    A    +V
Sbjct: 68  IKIMSRL-KNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSV 126

Query: 188 GKTILRIVKVCHENGV--------MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
               L  + V   +G+        +HRDL   N L  +   +  +K  DFG+S     G+
Sbjct: 127 SIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGN---HYTIKIADFGMSRNLYSGD 183

Query: 240 QFCEIVGSPY----YMAPE-VLRRNYGPEIDVWSAGVIIY--ILLCGVPPFWAETEEGI 291
            +  I G       +MA E +L   +    DVW+ GV ++    LC   P+   ++E +
Sbjct: 184 YY-RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQV 241

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 43.5 bits (102), Expect = 3e-04
 Identities = 34/92 (36%), Positives = 51/92 (55%), Gaps = 8/92 (8%)

Query: 186 AVGKTILRIVKVCHENGVMHRDLKPEN-FLFADGSENSQLKAIDFGLSIFF-KPGEQF-C 242
           A+ K +L  V+  H+  ++HRD+K EN FL  DG     +   DFG ++ F K  E F  
Sbjct: 271 AIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGK----IVLGDFGTAMPFEKEREAFDY 326

Query: 243 EIVGSPYYMAPEVLRRNYGPEI-DVWSAGVII 273
             VG+    +PE+L  +   EI D+WS G+I+
Sbjct: 327 GWVGTVATNSPEILAGDGYCEITDIWSCGLIL 358

Length = 501

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 43.0 bits (101), Expect = 3e-04
 Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 24/195 (12%)

Query: 105 TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELC 164
           TGE    ++I  E    E+ +  ++ E+ + + L  HPNIV Y+  +   + +++V    
Sbjct: 24  TGEYVTVRRINLEACTNEM-VTFLQGELHVSK-LFNHPNIVPYRATFIADNELWVVTSFM 81

Query: 165 EGGELFDRIVNKGHYT----ERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLF-ADGS 219
             G   D I    H+     E A A + + +L+ +   H  G +HR +K  + L   DG 
Sbjct: 82  AYGSAKDLICT--HFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGK 139

Query: 220 EN-SQLKAIDFGLSIFFKPGEQFCEIVGSPYY-------MAPEVLRRN---YGPEIDVWS 268
              S L++    LS+    G++   +   P Y       ++PEVL++N   Y  + D++S
Sbjct: 140 VYLSGLRSN---LSM-INHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYS 195

Query: 269 AGVIIYILLCGVPPF 283
            G+    L  G  PF
Sbjct: 196 VGITACELANGHVPF 210

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 42.3 bits (100), Expect = 4e-04
 Identities = 54/239 (22%), Positives = 88/239 (36%), Gaps = 51/239 (21%)

Query: 84  TFGKELGRGEFGITHQCF-----------EIETGETYACKKIAKEKLKTEIDI---DDVR 129
            F ++LG G+FG  H C              E     A   +A + L+ +      +D  
Sbjct: 8   NFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFL 67

Query: 130 REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGK 189
           +EV+I+  L   PNI            + ++ME  E G+L         + ++  A    
Sbjct: 68  KEVKILSRL-SDPNIARLLGVCTVDPPLCMIMEYMENGDL-------NQFLQKHVAETSG 119

Query: 190 TILRIVKVCHENGV------------------MHRDLKPENFLFADGSENSQLKAIDFGL 231
                  +     +                  +HRDL   N L     +N  +K  DFG+
Sbjct: 120 LACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLV---GKNYTIKIADFGM 176

Query: 232 SIFFKPGEQFCEIVGSP----YYMAPE-VLRRNYGPEIDVWSAGVIIY-IL-LCGVPPF 283
           S      + +  + G       +MA E VL   +  + DVW+ GV ++ IL LC   P+
Sbjct: 177 SRNLYSSD-YYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPY 234

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|215520 PLN02964, PLN02964, phosphatidylserine decarboxylase

 Score = 42.5 bits (100), Expect = 6e-04
 Identities = 17/55 (30%), Positives = 35/55 (63%)

Query: 390 KQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDE 444
           +++  ++D D++G L+F E  D +   G  V+    + L +AAD++G+G+++ DE
Sbjct: 182 RRILAIVDYDEDGQLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDE 236

Length = 644

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 41.2 bits (96), Expect = 8e-04
 Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 24/222 (10%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIV 145
           K+LG G+FG      E+         K+A + +K   + ++    E  +M+ L +H  +V
Sbjct: 12  KKLGAGQFG------EVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLV 64

Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAV--GKTILRIVKVCHENGV 203
               A   K+ IY++ E    G L D + +     +     +     I   +    +   
Sbjct: 65  KL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY 123

Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRNY 260
           +HRDL+  N L    S +   K  DFGL+   +  E +    G+ +   + APE +  N+
Sbjct: 124 IHRDLRAANILV---SASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI--NF 177

Query: 261 GP---EIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           G    + DVWS G+++  I+  G  P+   +   +  A+ RG
Sbjct: 178 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG 219

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 41.4 bits (97), Expect = 9e-04
 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 4/93 (4%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           D+   GK LGRG FG   Q       ++ +C+ +A + LK   T  +   +  E++I+ H
Sbjct: 7   DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIH 66

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVM-ELCEGGEL 169
           +  H N+V    A        +V+ E C+ G L
Sbjct: 67  IGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNL 99

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain

 Score = 36.0 bits (84), Expect = 0.001
 Identities = 9/30 (30%), Positives = 19/30 (63%)

Query: 388 QIKQMFYMMDTDKNGDLTFEELKDGLNMIG 417
           ++++ F + D D +G ++ EEL+  L  +G
Sbjct: 1   ELREAFKLFDKDGDGYISAEELRKALRSLG 30

Length = 30

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 40.7 bits (95), Expect = 0.002
 Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 30/216 (13%)

Query: 88  ELGRGEFGIT--HQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV 145
           E+GRG   +T  +      TG T    +I   +  TE  +  ++ EV ++ H  +HPNI+
Sbjct: 5   EIGRGFCNLTSVYLARHTPTG-TLVTVRITDLENCTEEHLKALQNEV-VLSHFFRHPNIM 62

Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL----RIVKVCHEN 201
           T    +     ++++      G      + K ++ E  + A+   IL    R +   H+N
Sbjct: 63  TSWTVFTTGSWLWVISPFMAYGSA--NSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN 120

Query: 202 GVMHRDLKPENFLFA-DGSENSQLKAIDFGLSIFF---KPGEQFCEIVGSPYY------- 250
           G +HR++K  + L + DG     L ++  GLS  +   + G++   +   P +       
Sbjct: 121 GYIHRNIKASHILISGDG-----LVSLS-GLSHLYSLVRNGQKAKVVYDFPQFSTSVLPW 174

Query: 251 MAPEVLRRN---YGPEIDVWSAGVIIYILLCGVPPF 283
           ++PE+LR++   Y  + D++S G+    L  G  PF
Sbjct: 175 LSPELLRQDLYGYNVKSDIYSVGITACELATGRVPF 210

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 40.4 bits (94), Expect = 0.002
 Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 8/85 (9%)

Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPY-YMAPE-VLRRN 259
           +HRDL   N L    SEN+ +K  DFGL+  I+  P          P  +MAPE +  + 
Sbjct: 196 IHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKV 252

Query: 260 YGPEIDVWSAGVIIY-ILLCGVPPF 283
           Y  + DVWS GV+++ I   G  P+
Sbjct: 253 YTTQSDVWSFGVLLWEIFSLGASPY 277

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 40.4 bits (94), Expect = 0.002
 Identities = 59/243 (24%), Positives = 97/243 (39%), Gaps = 21/243 (8%)

Query: 79  ILDKYTFGKE--LGRGEFGITHQCFEIETGETYACK---KIAKEKLKTEIDIDDVRREVE 133
           IL +  F K   LG G FG  ++   I  GE        K  +E    + +  ++  E  
Sbjct: 3   ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKAN-KEILDEAY 61

Query: 134 IMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTIL 192
           +M  +  +P++            + L+ +L   G L D +  +K +   +        I 
Sbjct: 62  VMASV-DNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 119

Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY--- 249
           + +    E  ++HRDL   N L         +K  DFGL+      E+     G      
Sbjct: 120 KGMNYLEERRLVHRDLAARNVLVKT---PQHVKITDFGLAKLLGADEKEYHAEGGKVPIK 176

Query: 250 YMAPE-VLRRNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPW 307
           +MA E +L R Y  + DVWS GV ++ L+  G  P+       I+  + +G    ER P 
Sbjct: 177 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG----ERLPQ 232

Query: 308 PKV 310
           P +
Sbjct: 233 PPI 235

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 40.4 bits (94), Expect = 0.002
 Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 18/144 (12%)

Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPY-YMAPE-VLRRN 259
           +HRDL   N L    SEN+ +K  DFGL+  I+  P          P  +MAPE +  R 
Sbjct: 201 IHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV 257

Query: 260 YGPEIDVWSAGVIIY-ILLCGVPPF-WAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
           Y  + DVWS GV+++ I   G  P+   + +E     +  G     R   P  +    E+
Sbjct: 258 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT----RMRAPDYT--TPEM 311

Query: 318 VKNMLD---PNPYNRLTLEEVLEN 338
            + MLD     P  R T  E++E+
Sbjct: 312 YQTMLDCWHGEPSQRPTFSELVEH 335

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|197477 smart00027, EH, Eps15 homology domain

 Score = 37.6 bits (88), Expect = 0.002
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 462 SQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAM 521
            Q FR  DKNQ G +   + K +LL   +G      +  I    D+D DG +  +EF   
Sbjct: 13  EQIFRSLDKNQDGTVTGAQAKPILL--KSGLP-QTLLAKIWNLADIDNDGELDKDEFALA 69

Query: 522 M 522
           M
Sbjct: 70  M 70

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences. Length = 96

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 39.8 bits (93), Expect = 0.002
 Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 25/261 (9%)

Query: 89  LGRGEFG-ITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR---REVEIMRHLPKHPNI 144
           +G+G FG + H       G+   C   A + L    D+++V    +E  IM+    HPN+
Sbjct: 3   IGKGHFGCVYHGTLIDSDGQKIHC---AVKSLNRITDLEEVEQFLKEGIIMKDF-SHPNV 58

Query: 145 VTYKEAYEDKDAIYLV-MELCEGGELFDRIVNKGHY-TERAAAAVGKTILRIVKVCHENG 202
           ++        +   LV +   + G+L + I ++ H  T +     G  + + ++      
Sbjct: 59  LSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKK 118

Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPY---YMAPEVLR 257
            +HRDL   N +     E+  +K  DFGL+  I+ K         G+     +MA E L+
Sbjct: 119 FVHRDLAARNCML---DESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQ 175

Query: 258 -RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA- 314
            + +  + DVWS GV+++ L+  G PP+       I   +++G+    R   P+   +  
Sbjct: 176 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGR----RLLQPEYCPDPL 231

Query: 315 KELVKNMLDPNPYNRLTLEEV 335
            E++ +   P P  R T  E+
Sbjct: 232 YEVMLSCWHPKPEMRPTFSEL 252

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|200946 pfam00036, efhand, EF hand

 Score = 35.1 bits (82), Expect = 0.003
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 388 QIKQMFYMMDTDKNGDLTFEELKDGLNMI 416
           ++K+ F   D D +G ++FEE K+ L  +
Sbjct: 1   ELKEAFKEFDKDGDGKISFEEFKELLKKL 29

The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29

>gnl|CDD|200946 pfam00036, efhand, EF hand

 Score = 34.7 bits (81), Expect = 0.003
 Identities = 12/25 (48%), Positives = 17/25 (68%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVL 485
           L +AF+ FDK+  G I  +E KE+L
Sbjct: 2   LKEAFKEFDKDGDGKISFEEFKELL 26

The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29

>gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain

 Score = 34.9 bits (81), Expect = 0.003
 Identities = 11/25 (44%), Positives = 18/25 (72%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVL 485
           L +AF+ FDK+  G+I  +EL++ L
Sbjct: 2   LREAFKLFDKDGDGYISAEELRKAL 26

Length = 30

>gnl|CDD|238131 cd00213, S-100, S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

 Score = 36.7 bits (86), Expect = 0.003
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 6/45 (13%)

Query: 479 DELKEVLLEDN-----AGPNGDQTIRDILRDVDLDRDGRISFEEF 518
            ELKE LLE             + +  I++D+D+++DG++ F+EF
Sbjct: 30  KELKE-LLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEF 73

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents the interaction site of S100 proteins with their target proteins. There is experimental evidence showing that many S100 proteins have multiple binding partners with diverse mode of interaction with different targets. In addition to S100 proteins (such as S100A1,-3,-4,-6,-7,-10,-11,and -13), this group includes the ''fused'' gene family, a group of calcium binding S100-related proteins. The ''fused'' gene family includes multifunctional epidermal differentiation proteins - profilaggrin, trichohyalin, repetin, hornerin, and cornulin; functionally these proteins are associated with keratin intermediate filaments and partially crosslinked to the cell envelope. These ''fused'' gene proteins contain N-terminal sequence with two Ca-binding EF-hands motif, which may be associated with calcium signaling in epidermal cells and autoprocessing in a calcium-dependent manner. In contrast to S100 proteins, "fused" gene family proteins contain an extraordinary high number of almost perfect peptide repeats with regular array of polar and charged residues similar to many known cell envelope proteins. Length = 88

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 39.4 bits (92), Expect = 0.004
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 16/89 (17%)

Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKP-----GEQFCEIVGSPYYMAPE-V 255
           +HRDL   N L    SEN+ +K  DFGL+  I+  P     G+    +     +MAPE +
Sbjct: 195 IHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGDARLPL----KWMAPESI 247

Query: 256 LRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
             + Y  + DVWS GV+++ I   G  P+
Sbjct: 248 FDKVYTTQSDVWSFGVLLWEIFSLGASPY 276

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 39.2 bits (91), Expect = 0.004
 Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 33/214 (15%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK----TEIDIDDVRREVEIMRHLP 139
             GK LG GEFG      E +  +  +  K+A + +K    T  +++D   E   M+   
Sbjct: 2   ALGKTLGEGEFG---SVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEF- 57

Query: 140 KHPNIV---------TYKEAYEDKDAIYLVMELCEGGEL-----FDRIVNKGHY-TERAA 184
            HPN++            E Y    +  +++   + G+L     + R+ +   Y   +  
Sbjct: 58  DHPNVMRLIGVCLQTVESEGYP---SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQML 114

Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE- 243
                 I   ++       +HRDL   N +    +EN  +   DFGLS     G+ + + 
Sbjct: 115 VKFMTDIASGMEYLSSKSFIHRDLAARNCML---NENMNVCVADFGLSKKIYNGDYYRQG 171

Query: 244 -IVGSPY-YMAPEVLR-RNYGPEIDVWSAGVIIY 274
            I   P  ++A E L  R Y  + DVWS GV ++
Sbjct: 172 RIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMW 205

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	586
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
KOG0695	593	consensus Serine/threonine protein kinase [Signal	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	100.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
KOG1290	590	consensus Serine/threonine protein kinase [Signal	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
KOG1027	903	consensus Serine/threonine protein kinase and endo	100.0
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	100.0
PLN03224	507	probable serine/threonine protein kinase; Provisio	100.0
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	100.0
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG1167	418	consensus Serine/threonine protein kinase of the C	100.0
KOG0576	829	consensus Mitogen-activated protein kinase kinase	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
KOG1152	772	consensus Signal transduction serine/threonine kin	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	100.0
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.98
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.97
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.97
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.96
PLN00181	793	protein SPA1-RELATED; Provisional	99.96
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.95
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.94
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.94
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.94
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.93
PRK09188	365	serine/threonine protein kinase; Provisional	99.93
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.93
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.93
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.93
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	99.93
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	99.91
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.91
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	99.9
KOG4223	325	consensus Reticulocalbin, calumenin, DNA supercoil	99.9
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.89
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.89
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.89
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	99.89
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.88
PRK12274	218	serine/threonine protein kinase; Provisional	99.88
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	99.87
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.86
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	99.86
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.85
PRK10345	210	hypothetical protein; Provisional	99.85
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.84
KOG0037	221	consensus Ca2+-binding protein, EF-Hand protein su	99.83
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.83
PTZ00184	149	calmodulin; Provisional	99.82
PTZ00183	158	centrin; Provisional	99.82
smart00090	237	RIO RIO-like kinase.	99.8
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.8
KOG0030	152	consensus Myosin essential light chain, EF-Hand pr	99.79
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.79
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.79
KOG0031	171	consensus Myosin regulatory light chain, EF-Hand p	99.78
PRK14879	211	serine/threonine protein kinase; Provisional	99.76
KOG0031	171	consensus Myosin regulatory light chain, EF-Hand p	99.76
KOG0030	152	consensus Myosin essential light chain, EF-Hand pr	99.74
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.73
KOG0037	221	consensus Ca2+-binding protein, EF-Hand protein su	99.73
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.72
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.71
PTZ00183	158	centrin; Provisional	99.71
KOG0034	187	consensus Ca2+/calmodulin-dependent protein phosph	99.69
PTZ00184	149	calmodulin; Provisional	99.68
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.68
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.68
KOG0044	193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	99.67
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.66
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.65
KOG0036	463	consensus Predicted mitochondrial carrier protein	99.61
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.61
KOG0036	463	consensus Predicted mitochondrial carrier protein	99.57
KOG4251	362	consensus Calcium binding protein [General functio	99.53
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.44
KOG0034	187	consensus Ca2+/calmodulin-dependent protein phosph	99.41
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.41
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.39
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.39
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.38
KOG1243	690	consensus Protein kinase [General function predict	99.38
KOG3087	229	consensus Serine/threonine protein kinase [General	99.36
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.35
PLN02964	644	phosphatidylserine decarboxylase	99.35
PLN02964	644	phosphatidylserine decarboxylase	99.34
KOG0044	193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	99.32
KOG4223	325	consensus Reticulocalbin, calumenin, DNA supercoil	99.31
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.3
KOG2643	489	consensus Ca2+ binding protein, contains EF-hand m	99.2
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	99.16
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	99.16
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	99.15
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	99.14
KOG0038	189	consensus Ca2+-binding kinase interacting protein	99.11
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.1
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	99.1
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	99.09
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	99.02
COG4248	637	Uncharacterized protein with protein kinase and he	98.97
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.97
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.95
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.93
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	98.93
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	98.93
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	98.92
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	98.92
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	98.92
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	98.88
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	98.85
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	98.85
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	98.84
cd00213	88	S-100 S-100: S-100 domain, which represents the la	98.82
cd00052	67	EH Eps15 homology domain; found in proteins implic	98.81
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.81
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.81
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.81

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.5e-62  Score=465.67  Aligned_cols=268  Identities=38%  Similarity=0.683  Sum_probs=245.7

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChh----cHHHHHHHHHHHHhCCCCCCeeEEEEEEE
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEI----DIDDVRREVEIMRHLPKHPNIVTYKEAYE  152 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~----~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~  152 (586)
                      ..+.+.|.+.+.||+|+||.|-+|..+.+|+.||||++.+.......    ....+.+|++||++| +|||||+++++|+
T Consensus       168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL-~HP~IV~~~d~f~  246 (475)
T KOG0615|consen  168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL-SHPNIVRIKDFFE  246 (475)
T ss_pred             chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc-CCCCEEEEeeeee
Confidence            34667899999999999999999999999999999999887665422    334578999999999 9999999999999


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          153 DKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       153 ~~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                      .++..||||||++||+|++.+..++.+.+...+.+++||+.|+.|||+.||+||||||+|||+..+.+...+||+|||+|
T Consensus       247 ~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlA  326 (475)
T KOG0615|consen  247 VPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLA  326 (475)
T ss_pred             cCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchh
Confidence            99999999999999999999999999999999999999999999999999999999999999977667789999999999


Q ss_pred             cccCCCCceecccCCccccchhhhhc----cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHH-HHHHHHhCccCCCCCCC
Q 043828          233 IFFKPGEQFCEIVGSPYYMAPEVLRR----NYGPEIDVWSAGVIIYILLCGVPPFWAETEEG-IAHAIIRGKIDFERDPW  307 (586)
Q Consensus       233 ~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~  307 (586)
                      +.......+.+.||||.|.|||++..    .+..++||||+||+||-+++|.+||.+..... +.+.|.++.+.|..+.|
T Consensus       327 K~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w  406 (475)
T KOG0615|consen  327 KVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQW  406 (475)
T ss_pred             hccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhh
Confidence            99888888889999999999999963    24558999999999999999999998765554 88999999999999999


Q ss_pred             CCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       308 ~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      ..++.++.+||.+||..||++|||++|+|+||||+...
T Consensus       407 ~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  407 DRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             hhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence            99999999999999999999999999999999999653

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=5.3e-61  Score=428.38  Aligned_cols=299  Identities=38%  Similarity=0.739  Sum_probs=275.6

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .+.++|.+.+.||+|.|++||+|.+..+|+.+|+|+|....+... ..+.+.+|+.|.+.| +|||||++.+.+...+..
T Consensus         8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~L-qHP~IvrL~~ti~~~~~~   85 (355)
T KOG0033|consen    8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKL-QHPNIVRLHDSIQEESFH   85 (355)
T ss_pred             ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhc-CCCcEeehhhhhccccee
Confidence            456789999999999999999999999999999999987766544 678899999999999 999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |||+|++.|++|..-+..+..++|..+-.+++||+.||.|||.+||||||+||+|+++.+.+...-+||+|||+|..+..
T Consensus        86 ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~  165 (355)
T KOG0033|consen   86 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND  165 (355)
T ss_pred             EEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC
Confidence            99999999999988887777789999999999999999999999999999999999999888888999999999999987


Q ss_pred             CCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      +..+...+|||.|||||++++ .|+..+|||+.|||||-|+.|.+||++.+...+.+.|+.+.+.++.+.|+.+++++++
T Consensus       166 g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~  245 (355)
T KOG0033|consen  166 GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKS  245 (355)
T ss_pred             ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHH
Confidence            788889999999999999974 7999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCccCCCCCCCccCCCccccchhhhhhhhhhhhhhhhhcc
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVA  378 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~  378 (586)
                      ||++||..||.+|+|+.|+|+|||+.+...-......+.+.+.+++|....+++..++.-+.
T Consensus       246 LvrrML~~dP~kRIta~EAL~HpWi~~r~~~As~~H~~dtvd~lrkfNarRKLKgavLtav~  307 (355)
T KOG0033|consen  246 LIRRMLTVNPKKRITADEALKHPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTVI  307 (355)
T ss_pred             HHHHHhccChhhhccHHHHhCCchhcchHHHHHHhhhHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            99999999999999999999999998765444444456778899999999999998877553

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.5e-57  Score=455.47  Aligned_cols=256  Identities=37%  Similarity=0.635  Sum_probs=243.4

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      .+|..++.||+|||+.||.+++..+|+.||+|+|++..+.+....+.+.+||+|.+.| +|||||+++++|++.+++|||
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L-~HpnIV~f~~~FEDs~nVYiv   96 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSL-KHPNIVQFYHFFEDSNNVYIV   96 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhc-CCCcEEeeeeEeecCCceEEE
Confidence            4799999999999999999999999999999999999888888889999999999999 999999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC-C
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-E  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~  239 (586)
                      .|+|+.++|..+++..+.++|.+++.+++||+.||.|||+++|+|||||..|+|+   +++.+|||+|||+|...... +
T Consensus        97 LELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL---~~~~~VKIgDFGLAt~le~~~E  173 (592)
T KOG0575|consen   97 LELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL---NENMNVKIGDFGLATQLEYDGE  173 (592)
T ss_pred             EEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee---cCcCcEEecccceeeeecCccc
Confidence            9999999999999999999999999999999999999999999999999999999   78889999999999988744 6


Q ss_pred             ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHH
Q 043828          240 QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV  318 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  318 (586)
                      ...+.||||.|.|||++. ..++..+||||+||+||.||+|++||...+-.+++..|....+.+|.    .+|.++++||
T Consensus       174 rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~----~ls~~A~dLI  249 (592)
T KOG0575|consen  174 RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS----HLSAEAKDLI  249 (592)
T ss_pred             ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc----ccCHHHHHHH
Confidence            778899999999999996 47899999999999999999999999999999999999999998876    5899999999


Q ss_pred             HHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          319 KNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       319 ~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .+||++||.+|||+++||.|+||+..
T Consensus       250 ~~lL~~~P~~Rpsl~~vL~h~Ff~~g  275 (592)
T KOG0575|consen  250 RKLLRPNPSERPSLDEVLDHPFFKSG  275 (592)
T ss_pred             HHHhcCCcccCCCHHHHhcCHhhhCC
Confidence            99999999999999999999999543

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-55  Score=442.78  Aligned_cols=321  Identities=55%  Similarity=0.948  Sum_probs=291.7

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      ..+...|++.+.||+|.||.||+|+++.+|+.+|+|++.+.........+.+.+|+.+|++|..|||||.++++|++...
T Consensus        31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~  110 (382)
T KOG0032|consen   31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDS  110 (382)
T ss_pred             ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCe
Confidence            45667899999999999999999999999999999999998877666678999999999999669999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCC-CCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSE-NSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~-~~~vkl~Dfg~a~~~  235 (586)
                      +++|||+|.||.|++.+... .+++..+..+++|++.++.|||+.||+||||||+|+|+..... .+.+|++|||++...
T Consensus       111 ~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~  189 (382)
T KOG0032|consen  111 VYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI  189 (382)
T ss_pred             EEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence            99999999999999999877 4999999999999999999999999999999999999976543 468999999999998


Q ss_pred             CCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          236 KPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       236 ~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      ..+......+|||.|+|||++. ..|+..+||||+||++|.|++|.+||++.+..+....+..+.+.|..++|+.++..+
T Consensus       190 ~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~a  269 (382)
T KOG0032|consen  190 KPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESA  269 (382)
T ss_pred             cCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHH
Confidence            8877788899999999999998 689999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCccCCCCCCCccCCCccccchhhhhhhhhhhhhhhhhcccCCchhhHhHHHHhhh
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFY  394 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~l~~~~~~~~~~~F~  394 (586)
                      ++||++||..||.+|+|+.++|+|||++.....+..........+.+++...+++++..++.....+.   +..++..|.
T Consensus       270 kd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  346 (382)
T KOG0032|consen  270 KDFIRKLLEFDPRKRLTAAQALQHPWIKSIGEATNIPLDISVLSRSKQFLSMSKLKKLALRVLAESLS---ISGLKEMFK  346 (382)
T ss_pred             HHHHHHhcccCcccCCCHHHHhcCccccCCcccccccccchhhhhHHHHHHHHHHHHHHHHHHhhhhh---HHHHHHHHH
Confidence            99999999999999999999999999998766666666666667777777777777766666665555   778888899


Q ss_pred             hccCCCC
Q 043828          395 MMDTDKN  401 (586)
Q Consensus       395 ~~D~~~~  401 (586)
                      .+|.+++
T Consensus       347 ~~~~~~~  353 (382)
T KOG0032|consen  347 LMDTDNN  353 (382)
T ss_pred             hhccccc
Confidence            9998876

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-55  Score=419.76  Aligned_cols=259  Identities=34%  Similarity=0.639  Sum_probs=240.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++++.||+|+||+||.|+.+.+++.||+|++.+..+....+.+...+|..||.++ +||.||+++..|++.+.+|+
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v-~hPFiv~l~ysFQt~~kLyl  102 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI-KHPFIVKLIYSFQTEEKLYL  102 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC-CCCcEeeeEEecccCCeEEE
Confidence            46899999999999999999999999999999999998877766778899999999998 99999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc-CCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-KPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~-~~~  238 (586)
                      |+||+.||.|+..|++.+.+++..++.++..|+.||.|||++|||||||||+|||+   +..|+++|+|||+|+.. ..+
T Consensus       103 Vld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL---d~~GHi~LtDFgL~k~~~~~~  179 (357)
T KOG0598|consen  103 VLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL---DEQGHIKLTDFGLCKEDLKDG  179 (357)
T ss_pred             EEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee---cCCCcEEEeccccchhcccCC
Confidence            99999999999999999999999999999999999999999999999999999999   78999999999999854 444


Q ss_pred             CceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          239 EQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                      ....+.|||+.|||||++. ..|+..+|+||||+++|+|++|.+||.+.+...+.++|.++....+..   .++.++++|
T Consensus       180 ~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~---~ls~~ardl  256 (357)
T KOG0598|consen  180 DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPG---YLSEEARDL  256 (357)
T ss_pred             CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCc---cCCHHHHHH
Confidence            5666789999999999986 579999999999999999999999999999999999999998544432   479999999


Q ss_pred             HHHccCCCCCCCC----CHHHHhcCCCccCCC
Q 043828          318 VKNMLDPNPYNRL----TLEEVLENPWIKNDN  345 (586)
Q Consensus       318 i~~~L~~dp~~Rp----s~~eil~hp~~~~~~  345 (586)
                      |+++|..||++|.    ++.+|-+||||...+
T Consensus       257 l~~LL~rdp~~RLg~~~d~~~ik~HpfF~~in  288 (357)
T KOG0598|consen  257 LKKLLKRDPRQRLGGPGDAEEIKRHPFFKGIN  288 (357)
T ss_pred             HHHHhccCHHHhcCCCCChHHhhcCcccccCC
Confidence            9999999999995    899999999999764

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=4.7e-55  Score=415.72  Aligned_cols=258  Identities=28%  Similarity=0.404  Sum_probs=229.4

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC-e
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD-A  156 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~-~  156 (586)
                      ....+.+.++.||+|..|+||+|+|+.|++.+|+|+|....  .+....++.+|+++++.. +||+||++|++|..+. .
T Consensus        76 i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~--~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~~~~~  152 (364)
T KOG0581|consen   76 ISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNI--DPALQKQILRELEILRSC-QSPYIVGFYGAFYSNGEE  152 (364)
T ss_pred             cCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccC--CHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEeCCce
Confidence            34567888999999999999999999999999999994432  455568899999999999 9999999999999999 4


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      ++|+||||+||+|.+.+...++++|.....++.++++||.|||+ ++||||||||+|||+   +..+.|||||||.+..+
T Consensus       153 isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLv---NskGeVKicDFGVS~~l  229 (364)
T KOG0581|consen  153 ISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLV---NSKGEVKICDFGVSGIL  229 (364)
T ss_pred             EEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeee---ccCCCEEeccccccHHh
Confidence            99999999999999999988999999999999999999999995 999999999999999   77899999999999887


Q ss_pred             CCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCC-----CHHHHHHHHHhCccCCCCCCCCC
Q 043828          236 KPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAE-----TEEGIAHAIIRGKIDFERDPWPK  309 (586)
Q Consensus       236 ~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~  309 (586)
                      ... ...+.+||..|||||.+.+ .|+.++||||||++++|+++|+.||...     ..-+++..|..+..+-.  +-..
T Consensus       230 vnS-~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~l--P~~~  306 (364)
T KOG0581|consen  230 VNS-IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRL--PEGE  306 (364)
T ss_pred             hhh-hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCC--Cccc
Confidence            655 5578899999999999985 7999999999999999999999999774     55677777776543221  1125


Q ss_pred             CCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          310 VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +|+++++||..||++||.+|||++|+++|||+++.
T Consensus       307 fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~  341 (364)
T KOG0581|consen  307 FSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKF  341 (364)
T ss_pred             CCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhc
Confidence            89999999999999999999999999999999865

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=7.3e-55  Score=417.63  Aligned_cols=264  Identities=36%  Similarity=0.662  Sum_probs=240.3

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ...++|.+.+.||+|+||+||+|+++.++..||||.|.+..+. ....+.+..||.+|+.| +|||||+++++.++++.+
T Consensus         7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~-~k~~e~L~~Ei~iLkel-~H~nIV~l~d~~~~~~~i   84 (429)
T KOG0595|consen    7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLN-KKLVELLLSEIKILKEL-KHPNIVRLLDCIEDDDFI   84 (429)
T ss_pred             cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccC-HHHHHHHHHHHHHHHhc-CCcceeeEEEEEecCCeE
Confidence            4567999999999999999999999999999999999887653 44567889999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCC---CceEEeecccccc
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSEN---SQLKAIDFGLSIF  234 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~---~~vkl~Dfg~a~~  234 (586)
                      |+|||||.||+|.++++..+.+++..++.++.||+.||++||+++||||||||+|||+......   ..+||+|||+|+.
T Consensus        85 ~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~  164 (429)
T KOG0595|consen   85 YLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARF  164 (429)
T ss_pred             EEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhh
Confidence            9999999999999999999999999999999999999999999999999999999999754222   6899999999999


Q ss_pred             cCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          235 FKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       235 ~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      +.++....+.||+|.|||||++. ++|+.|+|+||+|+|+|+|++|.+||...+..++...+.++....+..+ ..++..
T Consensus       165 L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~-~~~s~~  243 (429)
T KOG0595|consen  165 LQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLP-AELSNP  243 (429)
T ss_pred             CCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchh-hhccCc
Confidence            99888888999999999999995 7899999999999999999999999999999999998877765444332 346677


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +.+|+...|..+|..|.+..+-+.|+++...
T Consensus       244 ~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~  274 (429)
T KOG0595|consen  244 LRELLISLLQRNPKDRISFEDFFDHPFLAAN  274 (429)
T ss_pred             hhhhhhHHHhcCccccCchHHhhhhhhcccC
Confidence            8899999999999999999999999999764

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-54  Score=427.57  Aligned_cols=261  Identities=33%  Similarity=0.607  Sum_probs=241.7

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      -..+|.+++.||.|+|++|++|+++.+++.||||++.+..+..+.-.+-+..|-.+|.+|.+||.|++|+-.|+|+..+|
T Consensus        71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY  150 (604)
T KOG0592|consen   71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY  150 (604)
T ss_pred             ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence            34689999999999999999999999999999999998887777667788899999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      +|+||+++|+|.++|...+.+++.-++.++.+|+.||.|||++|||||||||+|||+   +.++++||.|||.|+.+.+.
T Consensus       151 FvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL---d~dmhikITDFGsAK~l~~~  227 (604)
T KOG0592|consen  151 FVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL---DKDGHIKITDFGSAKILSPS  227 (604)
T ss_pred             EEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE---cCCCcEEEeeccccccCChh
Confidence            999999999999999999999999999999999999999999999999999999999   78999999999999877532


Q ss_pred             Cc--------------eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCC
Q 043828          239 EQ--------------FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE  303 (586)
Q Consensus       239 ~~--------------~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~  303 (586)
                      ..              ..+++||..|.+||+|.. ..++.+|||+||||||+|+.|.+||.+.++--+.+.|+.-.+.|+
T Consensus       228 ~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp  307 (604)
T KOG0592|consen  228 QKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFP  307 (604)
T ss_pred             hccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCC
Confidence            11              145899999999999975 568899999999999999999999999999999999999999887


Q ss_pred             CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCCC
Q 043828          304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH  346 (586)
Q Consensus       304 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~  346 (586)
                      .    ..++.+++||+++|..||.+|+|++||.+||||.....
T Consensus       308 ~----~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw  346 (604)
T KOG0592|consen  308 E----GFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDW  346 (604)
T ss_pred             C----CCCHHHHHHHHHHHccCccccccHHHHhhCcccccCCh
Confidence            5    57899999999999999999999999999999987543

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=6.8e-55  Score=400.23  Aligned_cols=258  Identities=31%  Similarity=0.617  Sum_probs=242.4

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ..+++|++++.||.|+||.|.+++++.+|..||+|++.+..+-.....+...+|..+|+.+ .||+++++++.|.+.+++
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v-~~PFlv~l~~t~~d~~~l  119 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAV-SHPFLVKLYGTFKDNSNL  119 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhc-cCceeEEEEEeeccCCeE
Confidence            4568999999999999999999999999999999999988877766778899999999999 799999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      ||||||++||.|++++++.+++++..++.++.||+.||+|||+++|++|||||+|||+   +.+|.+||+|||+|+....
T Consensus       120 ymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl---D~~G~iKitDFGFAK~v~~  196 (355)
T KOG0616|consen  120 YMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL---DQNGHIKITDFGFAKRVSG  196 (355)
T ss_pred             EEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee---ccCCcEEEEeccceEEecC
Confidence            9999999999999999999999999999999999999999999999999999999999   7899999999999998764


Q ss_pred             CCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      .  ..+.||||.|+|||++. +.|+.++|+|||||++|||+.|.+||...++..+.++|..+++.||.    .+++++++
T Consensus       197 r--T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~----~fs~~~kd  270 (355)
T KOG0616|consen  197 R--TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPS----YFSSDAKD  270 (355)
T ss_pred             c--EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCc----ccCHHHHH
Confidence            4  67899999999999986 67999999999999999999999999999999999999999999985    57999999


Q ss_pred             HHHHccCCCCCCCC-----CHHHHhcCCCccCCC
Q 043828          317 LVKNMLDPNPYNRL-----TLEEVLENPWIKNDN  345 (586)
Q Consensus       317 li~~~L~~dp~~Rp-----s~~eil~hp~~~~~~  345 (586)
                      ||.++|+.|-.+|.     ...+|.+||||+...
T Consensus       271 Ll~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~  304 (355)
T KOG0616|consen  271 LLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD  304 (355)
T ss_pred             HHHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence            99999999999994     667999999999643

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.2e-53  Score=428.24  Aligned_cols=261  Identities=37%  Similarity=0.642  Sum_probs=242.2

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..+-|++++.||.|+.|.|.+|++..||+..|||+|.+...........+.+||-||+-| .||||+++|++|++..++|
T Consensus        10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi-~HpnVl~LydVwe~~~~ly   88 (786)
T KOG0588|consen   10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLI-EHPNVLRLYDVWENKQHLY   88 (786)
T ss_pred             cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHh-cCCCeeeeeeeeccCceEE
Confidence            346799999999999999999999999999999999887544444556789999999988 9999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      +|.||++||.|++++..++++++..++++++||+.|+.|||..+|+||||||+|+|+   +..++|||+|||+|..-.++
T Consensus        89 lvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLL---d~~~nIKIADFGMAsLe~~g  165 (786)
T KOG0588|consen   89 LVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLL---DVKNNIKIADFGMASLEVPG  165 (786)
T ss_pred             EEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhh---hcccCEeeeccceeecccCC
Confidence            999999999999999999999999999999999999999999999999999999999   56667999999999988888


Q ss_pred             CceecccCCccccchhhhhc-cC-CCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          239 EQFCEIVGSPYYMAPEVLRR-NY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~~-~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      .-..+.||+|+|.|||++.+ .| +.++||||+|||||.||+|..||.+.+...++.++.+|.+..|    ..+++++++
T Consensus       166 klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MP----s~Is~eaQd  241 (786)
T KOG0588|consen  166 KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMP----SNISSEAQD  241 (786)
T ss_pred             ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCC----CcCCHHHHH
Confidence            88889999999999999975 44 7899999999999999999999999999999999999998877    369999999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCccCCCCC
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWIKNDNHA  347 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~~~~~~~  347 (586)
                      ||++||..||.+|+|.+||++|||+.+....
T Consensus       242 LLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~  272 (786)
T KOG0588|consen  242 LLRRMLDVDPSTRITTEEILKHPFLSGYTSL  272 (786)
T ss_pred             HHHHHhccCccccccHHHHhhCchhhcCCCC
Confidence            9999999999999999999999999876543

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=5e-53  Score=417.81  Aligned_cols=264  Identities=33%  Similarity=0.564  Sum_probs=237.8

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .-.++|+++..||+|+||.||+|+.+.||..||+|++.+........++.++.|-.+|... ++|.||+|+..|++..++
T Consensus       138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~-ds~~vVKLyYsFQD~~~L  216 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV-DSPWVVKLYYSFQDKEYL  216 (550)
T ss_pred             CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc-CCCcEEEEEEEecCCCee
Confidence            3467999999999999999999999999999999999998877777788899999999995 999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      ||||||++||++..+|.+.+.+++..++.++.+++.|+.-+|+.|+|||||||+|+||   +..|++||+|||++.....
T Consensus       217 YLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLi---D~~GHiKLSDFGLs~gl~~  293 (550)
T KOG0605|consen  217 YLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLI---DAKGHIKLSDFGLSTGLDK  293 (550)
T ss_pred             EEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheee---cCCCCEeeccccccchhhh
Confidence            9999999999999999999999999999999999999999999999999999999999   7899999999999853210


Q ss_pred             ----------------------CC-c-------------------------eecccCCccccchhhhh-ccCCCcchHHH
Q 043828          238 ----------------------GE-Q-------------------------FCEIVGSPYYMAPEVLR-RNYGPEIDVWS  268 (586)
Q Consensus       238 ----------------------~~-~-------------------------~~~~~gt~~y~aPE~l~-~~~~~~~Diws  268 (586)
                                            .+ .                         ....+|||-|+|||++. ..|+..+|+||
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS  373 (550)
T KOG0605|consen  294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS  373 (550)
T ss_pred             hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence                                  00 0                         01358999999999986 46999999999


Q ss_pred             HHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCC---CHHHHhcCCCccCCC
Q 043828          269 AGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRL---TLEEVLENPWIKNDN  345 (586)
Q Consensus       269 lG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rp---s~~eil~hp~~~~~~  345 (586)
                      ||||+||||.|.+||.+.++.++..+|.+-...+..+.-..++.+++|||.+||. ||.+|.   .++||.+||||+...
T Consensus       374 LG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~  452 (550)
T KOG0605|consen  374 LGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVD  452 (550)
T ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCC
Confidence            9999999999999999999999999999877555555556788999999999999 999998   599999999999764


Q ss_pred             C
Q 043828          346 H  346 (586)
Q Consensus       346 ~  346 (586)
                      .
T Consensus       453 W  453 (550)
T KOG0605|consen  453 W  453 (550)
T ss_pred             c
Confidence            3

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.1e-54  Score=391.79  Aligned_cols=264  Identities=33%  Similarity=0.666  Sum_probs=244.6

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCC-----hhcHHHHHHHHHHHHhCCCCCCeeEEEEEE
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-----EIDIDDVRREVEIMRHLPKHPNIVTYKEAY  151 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~-----~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~  151 (586)
                      ..+..+|.-.+.||.|..++|.+|.++.+|..+|+|+|.......     ....+.-..|+.||+++.+||+|+++.++|
T Consensus        13 ~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~y   92 (411)
T KOG0599|consen   13 KGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVY   92 (411)
T ss_pred             hhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeec
Confidence            456678998999999999999999999999999999986432211     122455678999999999999999999999


Q ss_pred             EeCCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          152 EDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       152 ~~~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                      +.+..+++|+|.|+.|.|++++...-.+++...+.|++|++.|+.|||.++||||||||+|||+   +.+.++||+|||+
T Consensus        93 es~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl---ddn~~i~isDFGF  169 (411)
T KOG0599|consen   93 ESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL---DDNMNIKISDFGF  169 (411)
T ss_pred             cCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee---ccccceEEeccce
Confidence            9999999999999999999999998899999999999999999999999999999999999999   6778999999999


Q ss_pred             ccccCCCCceecccCCccccchhhhhc-------cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCC
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLRR-------NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER  304 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~~-------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~  304 (586)
                      |..+.+++.....||||+|+|||.++.       .|+..+|+|++|||||.|+.|.+|||.....-++..|+.+++.|..
T Consensus       170 a~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~s  249 (411)
T KOG0599|consen  170 ACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRS  249 (411)
T ss_pred             eeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCC
Confidence            999999999999999999999999852       4888999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          305 DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       305 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      +.|..+|...++||.+||+.||.+|.|++|+|.||||..
T Consensus       250 peWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q  288 (411)
T KOG0599|consen  250 PEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ  288 (411)
T ss_pred             cchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence            999999999999999999999999999999999999964

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=6.7e-54  Score=394.36  Aligned_cols=258  Identities=28%  Similarity=0.552  Sum_probs=223.9

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +++|+.+.++|+|+||+||+|+++.||+.||||++.... .++...+-..+||.+|++| +|||+|.++++|.....+++
T Consensus         1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqL-kH~NLVnLiEVFrrkrklhL   78 (396)
T KOG0593|consen    1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQL-KHENLVNLIEVFRRKRKLHL   78 (396)
T ss_pred             CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhc-ccchHHHHHHHHHhcceeEE
Confidence            468999999999999999999999999999999985443 2233345578999999999 99999999999999999999


Q ss_pred             EEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC-C
Q 043828          160 VMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-P  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~-~  237 (586)
                      |+|||+. ++.+.+.. ...+++..+..+++|++.|+.|||+++||||||||+|||+   ..++.+||||||+|+.+. +
T Consensus        79 VFE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILi---t~~gvvKLCDFGFAR~L~~p  154 (396)
T KOG0593|consen   79 VFEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILI---TQNGVVKLCDFGFARTLSAP  154 (396)
T ss_pred             Eeeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEE---ecCCcEEeccchhhHhhcCC
Confidence            9999976 55555554 4569999999999999999999999999999999999999   688999999999999887 7


Q ss_pred             CCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc---------------
Q 043828          238 GEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI---------------  300 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~---------------  300 (586)
                      ++.++..+.|.+|+|||.+-+  +|+..+||||+||++.||++|.+.|.+.+.-+.+..|.....               
T Consensus       155 gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~  234 (396)
T KOG0593|consen  155 GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPF  234 (396)
T ss_pred             cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCc
Confidence            888889999999999999865  799999999999999999999999999888776666643211               


Q ss_pred             ----CCCCC--------CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          301 ----DFERD--------PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       301 ----~~~~~--------~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                          .+|.+        .+++++.-+.+|+++||..||.+|++.+|+|.||||.+
T Consensus       235 F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~  289 (396)
T KOG0593|consen  235 FHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG  289 (396)
T ss_pred             eeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence                11111        24567888999999999999999999999999999954

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-52  Score=419.91  Aligned_cols=259  Identities=41%  Similarity=0.721  Sum_probs=235.4

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCCh--hcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE--IDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      ...++|.+++.||+|+||+|+.|.+..+|..||+|++.+......  ...+.+.+|+.+++.+..||||+++++++....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            345789999999999999999999999999999998777533211  244677899999999945999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCC-CceEEeecccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSEN-SQLKAIDFGLSIF  234 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~-~~vkl~Dfg~a~~  234 (586)
                      .+|+|||||.||+|++++.+.+++.|..++.+++||+.|++|||++||+||||||+|||+   +.+ +++||+|||++..
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENill---d~~~~~~Kl~DFG~s~~  170 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILL---DGNEGNLKLSDFGLSAI  170 (370)
T ss_pred             eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEe---cCCCCCEEEeccccccc
Confidence            999999999999999999999999999999999999999999999999999999999999   455 8999999999998


Q ss_pred             c-CCCCceecccCCccccchhhhhc-c-C-CCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          235 F-KPGEQFCEIVGSPYYMAPEVLRR-N-Y-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       235 ~-~~~~~~~~~~gt~~y~aPE~l~~-~-~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      . .......+.+||+.|+|||++.+ . | +.++||||+||+||.|++|..||...+...+...|.++.+.++..    +
T Consensus       171 ~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~----~  246 (370)
T KOG0583|consen  171 SPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSY----L  246 (370)
T ss_pred             cCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCC----c
Confidence            8 46667788999999999999975 4 6 578999999999999999999999999999999999998888753    4


Q ss_pred             -CHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          311 -SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       311 -~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                       |+++++||.+||..||.+|+|+.+++.||||+.
T Consensus       247 ~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  247 LSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             CCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence             999999999999999999999999999999997

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-52  Score=405.90  Aligned_cols=263  Identities=32%  Similarity=0.488  Sum_probs=228.1

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC-e
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD-A  156 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~-~  156 (586)
                      .++++|.++++||.|+||.||+|+.+.+|..||||++.+.-...+  .-.=.||+..|++|..|||||++.+++.+.+ .
T Consensus         7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~e--e~~nLREvksL~kln~hpniikL~Evi~d~~~~   84 (538)
T KOG0661|consen    7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWE--ECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI   84 (538)
T ss_pred             hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHH--HHHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence            456899999999999999999999999999999999976543321  1223579999999955999999999998887 9


Q ss_pred             EEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      +|+|||||+ .+|+++++.+ ..+++..++.|+.||++||+|+|++|+.|||+||+|||+   .....|||+|||+|+..
T Consensus        85 L~fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi---~~~~~iKiaDFGLARev  160 (538)
T KOG0661|consen   85 LYFVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILI---SGNDVIKIADFGLAREV  160 (538)
T ss_pred             EeeeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEe---cccceeEeccccccccc
Confidence            999999995 5999999864 569999999999999999999999999999999999999   55789999999999999


Q ss_pred             CCCCceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCc--------------
Q 043828          236 KPGEQFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK--------------  299 (586)
Q Consensus       236 ~~~~~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~--------------  299 (586)
                      .....++..+.|.+|+|||+|-  +.|+.+.||||+|||++|+++-++.|.+.++-+.+.+|..-.              
T Consensus       161 ~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~L  240 (538)
T KOG0661|consen  161 RSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNL  240 (538)
T ss_pred             ccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHH
Confidence            8888899999999999999985  569999999999999999999999999998887777765422              


Q ss_pred             -----cCCCCC-------CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCCC
Q 043828          300 -----IDFERD-------PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH  346 (586)
Q Consensus       300 -----~~~~~~-------~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~  346 (586)
                           +.++.-       ..+..+.++.+||.+||.+||.+||||.|+|+||||+....
T Consensus       241 a~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~  299 (538)
T KOG0661|consen  241 ASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRA  299 (538)
T ss_pred             HHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccccc
Confidence                 222211       12346889999999999999999999999999999987543

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.5e-50  Score=396.71  Aligned_cols=260  Identities=31%  Similarity=0.516  Sum_probs=229.8

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC--Ce
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK--DA  156 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~--~~  156 (586)
                      ..+.|+.+++||+|+||.||+|++..+|+.||+|+++.+..... ......+||.||++| +||||++|.+.....  ..
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~-~~~t~~REI~ILr~l-~HpNIikL~eivt~~~~~s  192 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEG-FPITAIREIKILRRL-DHPNIIKLEEIVTSKLSGS  192 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCc-chHHHHHHHHHHHhc-CCCcccceeeEEEecCCce
Confidence            35679999999999999999999999999999999988765443 345678899999999 999999999998876  78


Q ss_pred             EEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      +|||+|||+. +|.-++.. .-.+++.++..+++||+.||.|||.+||+|||||.+|||+   +.++.+||+|||+|+++
T Consensus       193 iYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi---dn~G~LKiaDFGLAr~y  268 (560)
T KOG0600|consen  193 IYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI---DNNGVLKIADFGLARFY  268 (560)
T ss_pred             EEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE---cCCCCEEeccccceeec
Confidence            9999999976 78777766 3479999999999999999999999999999999999999   78899999999999977


Q ss_pred             CCCC--ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCC---
Q 043828          236 KPGE--QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP---  308 (586)
Q Consensus       236 ~~~~--~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~---  308 (586)
                      ....  .++..+-|.+|+|||+|-+  .|+.++|+||+||||.||++|+++|.+.++.+.++.|.+.........|+   
T Consensus       269 ~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~k  348 (560)
T KOG0600|consen  269 TPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSK  348 (560)
T ss_pred             cCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcccccc
Confidence            6543  5677889999999999964  69999999999999999999999999999999999998765554444443   


Q ss_pred             ----------------------CCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          309 ----------------------KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       309 ----------------------~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                            .+++.+.+|+..||..||.+|.||.++|+|+||...
T Consensus       349 LP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~  406 (560)
T KOG0600|consen  349 LPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTE  406 (560)
T ss_pred             CCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccC
Confidence                                  246789999999999999999999999999999543

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-51  Score=377.08  Aligned_cols=269  Identities=40%  Similarity=0.718  Sum_probs=241.8

Q ss_pred             CCCcccCeeec-ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe-
Q 043828           76 EGNILDKYTFG-KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED-  153 (586)
Q Consensus        76 ~~~~~~~y~~~-~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~-  153 (586)
                      ...+.++|.+. ++||-|-.|.|..|.++.||+.+|+|++...        ...++|++..-..+.|||||.++++|+. 
T Consensus        56 ~~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs  127 (400)
T KOG0604|consen   56 EYSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENS  127 (400)
T ss_pred             cccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhh
Confidence            34567889988 5799999999999999999999999987432        4568899888888899999999999863 


Q ss_pred             ---CCeEEEEEeccCCCChHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEee
Q 043828          154 ---KDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID  228 (586)
Q Consensus       154 ---~~~~~iv~E~~~gg~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~D  228 (586)
                         ..++.||||.++||.|++.++.++.  ++|..+..|++||..|+.|||+.+|.||||||+|+|+.+...+..+||+|
T Consensus       128 ~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtD  207 (400)
T KOG0604|consen  128 YQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTD  207 (400)
T ss_pred             ccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecc
Confidence               4678999999999999999998765  99999999999999999999999999999999999998888889999999


Q ss_pred             cccccccCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCC----HHHHHHHHHhCccCCC
Q 043828          229 FGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAET----EEGIAHAIIRGKIDFE  303 (586)
Q Consensus       229 fg~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~~~~i~~~~~~~~  303 (586)
                      ||+|+.........+.+-||+|.|||++. ..|+..+|+||+||++|.|++|++||++..    ..++...|..+.+.||
T Consensus       208 fGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP  287 (400)
T KOG0604|consen  208 FGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFP  287 (400)
T ss_pred             cccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCC
Confidence            99999877666677788999999999997 579999999999999999999999998754    3567889999999999


Q ss_pred             CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCCCCCCccC
Q 043828          304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSL  352 (586)
Q Consensus       304 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~~~~~~~  352 (586)
                      .+.|..+|+.++++|+++|..+|.+|.|+.++++|||+......++..+
T Consensus       288 ~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~tpl  336 (400)
T KOG0604|consen  288 EPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQTPL  336 (400)
T ss_pred             ChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCCCCc
Confidence            9999999999999999999999999999999999999998766665544

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=1.1e-51  Score=407.81  Aligned_cols=255  Identities=31%  Similarity=0.570  Sum_probs=235.5

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +++|.+.+.||+|+||+||+|+.+.+.+.||+|.+.+... .+.+++.+.+|++|++.| +|||||.++++|+...++|+
T Consensus         1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr-~~k~l~~l~~ev~i~r~l-kHpniv~m~esfEt~~~~~v   78 (808)
T KOG0597|consen    1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR-NEKELKNLRQEVRILRSL-KHPNIVEMLESFETSAHLWV   78 (808)
T ss_pred             CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCC-chHHHHHHHHHHHHHHhc-CCcchhhHHHhhcccceEEE
Confidence            4689999999999999999999999999999999988753 345678899999999999 99999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |+|||.| +|+.++...+.++|+.+..++.+++.||.|||+++|+|||+||.|||+   ...+.+|+||||+|+.+..+.
T Consensus        79 Vte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl---~~~~~~KlcdFg~Ar~m~~~t  154 (808)
T KOG0597|consen   79 VTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL---EKGGTLKLCDFGLARAMSTNT  154 (808)
T ss_pred             Eehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee---cCCCceeechhhhhhhcccCc
Confidence            9999977 999999999999999999999999999999999999999999999999   788999999999999887654


Q ss_pred             c-eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          240 Q-FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       240 ~-~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                      . .+.+.|||.|||||++. +.|+..+|+||+|||+|||++|++||...+..++...|......++.    ..+..++.|
T Consensus       155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~----~~S~~f~nf  230 (808)
T KOG0597|consen  155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPS----TASSSFVNF  230 (808)
T ss_pred             eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcc----cccHHHHHH
Confidence            4 45678999999999997 47999999999999999999999999999999999998887665543    789999999


Q ss_pred             HHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          318 VKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       318 i~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +..+|.+||.+|.|..+++.|||.+..
T Consensus       231 l~gLL~kdP~~RltW~~Ll~HpF~k~~  257 (808)
T KOG0597|consen  231 LQGLLIKDPAQRLTWTDLLGHPFWKGK  257 (808)
T ss_pred             HHHHhhcChhhcccHHHHhcChHHhhh
Confidence            999999999999999999999999864

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=1e-50  Score=367.44  Aligned_cols=258  Identities=33%  Similarity=0.537  Sum_probs=227.8

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      .+|...++||+|.||+||+|++..+|+.||+|+|......+... -...+||+.|+.+ +||||+.++++|...+.+.||
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~-~talREIK~Lqel-~h~nIi~LiD~F~~~~~l~lV   79 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGIN-RTALREIKLLQEL-KHPNIIELIDVFPHKSNLSLV   79 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCcc-HHHHHHHHHHHHc-cCcchhhhhhhccCCCceEEE
Confidence            47899999999999999999999999999999998876665544 3567899999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC-
Q 043828          161 MELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-  238 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-  238 (586)
                      +||++. +|...++.+ ..++...+..++.+++.||+|||++.|+||||||.|+|+   +.++.+||+|||+|+...+. 
T Consensus        80 fEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLi---s~~g~lKiADFGLAr~f~~p~  155 (318)
T KOG0659|consen   80 FEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLI---SSDGQLKIADFGLARFFGSPN  155 (318)
T ss_pred             EEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEE---cCCCcEEeecccchhccCCCC
Confidence            999965 899888764 468999999999999999999999999999999999999   78899999999999987543 


Q ss_pred             CceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCC--------
Q 043828          239 EQFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP--------  308 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~--------  308 (586)
                      ......+-|.+|+|||.+-  +.|+..+||||.|||+.||+.|.+-|.+.+.-+.+..|.+.........||        
T Consensus       156 ~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY  235 (318)
T KOG0659|consen  156 RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDY  235 (318)
T ss_pred             cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccH
Confidence            3444558899999999985  579999999999999999999999999999988888887755544444444        


Q ss_pred             ----------------CCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          309 ----------------KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       309 ----------------~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                      ..+.++.||+.+||..||.+|+|+.|+|+|+||+..
T Consensus       236 ~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~  287 (318)
T KOG0659|consen  236 VKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSL  287 (318)
T ss_pred             HHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcC
Confidence                            346788999999999999999999999999999963

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-50  Score=408.35  Aligned_cols=259  Identities=29%  Similarity=0.542  Sum_probs=240.5

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      -.++|.++++||+|.||+|+++..+.+++.||||++++..+....+++....|..|+....+||.+++++..|++.+++|
T Consensus       366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~  445 (694)
T KOG0694|consen  366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF  445 (694)
T ss_pred             cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence            46799999999999999999999999999999999999998888889999999999998878999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC-C
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-P  237 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~-~  237 (586)
                      +||||+.||++. .++..+.+++..++.|+..++.||.|||++||||||||.+|||+   +..|++||+|||+++..- .
T Consensus       446 fvmey~~Ggdm~-~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL---D~eGh~kiADFGlcKe~m~~  521 (694)
T KOG0694|consen  446 FVMEYVAGGDLM-HHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL---DTEGHVKIADFGLCKEGMGQ  521 (694)
T ss_pred             EEEEecCCCcEE-EEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE---cccCcEEecccccccccCCC
Confidence            999999999954 34455789999999999999999999999999999999999999   788999999999998654 5


Q ss_pred             CCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      +....++||||.|||||++. ..|+.++|+|||||+||||+.|+.||.+.+++++...|......+|.    .+|.++..
T Consensus       522 g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~----~ls~ea~~  597 (694)
T KOG0694|consen  522 GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR----FLSKEAIA  597 (694)
T ss_pred             CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCC----cccHHHHH
Confidence            56677899999999999997 47999999999999999999999999999999999999999988875    58999999


Q ss_pred             HHHHccCCCCCCCCC-----HHHHhcCCCccCCC
Q 043828          317 LVKNMLDPNPYNRLT-----LEEVLENPWIKNDN  345 (586)
Q Consensus       317 li~~~L~~dp~~Rps-----~~eil~hp~~~~~~  345 (586)
                      +++++|.++|++|..     +++|..||||+...
T Consensus       598 il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~  631 (694)
T KOG0694|consen  598 IMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSID  631 (694)
T ss_pred             HHHHHhccCcccccCCCCCCchhhhhCCccccCC
Confidence            999999999999984     68999999999764

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-50  Score=390.14  Aligned_cols=264  Identities=32%  Similarity=0.642  Sum_probs=230.6

Q ss_pred             CCCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCC-----------hhcHHHHHHHHHHHHhCCCCCCe
Q 043828           76 EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-----------EIDIDDVRREVEIMRHLPKHPNI  144 (586)
Q Consensus        76 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~-----------~~~~~~~~~Ei~~l~~l~~hpnI  144 (586)
                      ....+++|++++.||+|.||.|.+|++..+++.||+|++.+..+..           ...++.+++||.||++| .||||
T Consensus        92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl-~H~nV  170 (576)
T KOG0585|consen   92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL-HHPNV  170 (576)
T ss_pred             cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc-CCcCe
Confidence            3456789999999999999999999999999999999998764422           23357899999999999 89999


Q ss_pred             eEEEEEEEeC--CeEEEEEeccCCCChHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCC
Q 043828          145 VTYKEAYEDK--DAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSEN  221 (586)
Q Consensus       145 v~l~~~~~~~--~~~~iv~E~~~gg~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~  221 (586)
                      |+|+++..+.  +.+|||+|||..|.+.. ...... +++.+++.|++.++.||.|||.+|||||||||+|+|+   +..
T Consensus       171 V~LiEvLDDP~s~~~YlVley~s~G~v~w-~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl---~~~  246 (576)
T KOG0585|consen  171 VKLIEVLDDPESDKLYLVLEYCSKGEVKW-CPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLL---SSD  246 (576)
T ss_pred             eEEEEeecCcccCceEEEEEeccCCcccc-CCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEE---cCC
Confidence            9999999765  67999999999998843 333344 9999999999999999999999999999999999999   677


Q ss_pred             CceEEeecccccccCC------CCceecccCCccccchhhhhcc-----CCCcchHHHHHHHHHHHhhCCCCCCCCCHHH
Q 043828          222 SQLKAIDFGLSIFFKP------GEQFCEIVGSPYYMAPEVLRRN-----YGPEIDVWSAGVIIYILLCGVPPFWAETEEG  290 (586)
Q Consensus       222 ~~vkl~Dfg~a~~~~~------~~~~~~~~gt~~y~aPE~l~~~-----~~~~~DiwslG~il~~ll~g~~pf~~~~~~~  290 (586)
                      ++|||+|||.+.....      .......+|||.|+|||.+.+.     .+.+.||||+||+||.|+.|+.||.+....+
T Consensus       247 g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~  326 (576)
T KOG0585|consen  247 GTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELE  326 (576)
T ss_pred             CcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHH
Confidence            9999999999886632      2234457899999999998641     3668899999999999999999999999999


Q ss_pred             HHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCCC
Q 043828          291 IAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH  346 (586)
Q Consensus       291 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~  346 (586)
                      +..+|.+..+.|+..+  .+.+.+++||.+||.+||++|+++.+|..|||......
T Consensus       327 l~~KIvn~pL~fP~~p--e~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~  380 (576)
T KOG0585|consen  327 LFDKIVNDPLEFPENP--EINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGD  380 (576)
T ss_pred             HHHHHhcCcccCCCcc--cccHHHHHHHHHHhhcChhheeehhhheecceeccCCC
Confidence            9999999999988763  68899999999999999999999999999999976543

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7.3e-52  Score=377.21  Aligned_cols=252  Identities=30%  Similarity=0.538  Sum_probs=220.3

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEE-EEEeCC-e
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKE-AYEDKD-A  156 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~-~~~~~~-~  156 (586)
                      .+.+|++++.||+|.||.||+|.+..+|..+|.|.|.-... +......+..|+.+|++| +|||||++++ .|..+. .
T Consensus        17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~m-d~k~rq~~v~Ei~lLkQL-~HpNIVqYy~~~f~~~~ev   94 (375)
T KOG0591|consen   17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMM-DAKARQDCVKEISLLKQL-NHPNIVQYYAHSFIEDNEV   94 (375)
T ss_pred             cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhc-cHHHHHHHHHHHHHHHhc-CCchHHHHHHHhhhccchh
Confidence            45689999999999999999999999999999999974443 344567889999999999 9999999998 454444 4


Q ss_pred             EEEEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHH--cC--ceeccCCCCceEeecCCCCCceEEee
Q 043828          157 IYLVMELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHE--NG--VMHRDLKPENFLFADGSENSQLKAID  228 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~--~~--ivHrDlkp~Nill~~~~~~~~vkl~D  228 (586)
                      ++||||||.+|+|...++.    +..+++..+|.++.|++.||.+||.  ..  |+||||||.||++   +.++.|||+|
T Consensus        95 lnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl---~~~gvvKLGD  171 (375)
T KOG0591|consen   95 LNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFL---TANGVVKLGD  171 (375)
T ss_pred             hHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEE---cCCCceeecc
Confidence            9999999999999988864    4569999999999999999999999  45  9999999999999   6889999999


Q ss_pred             cccccccCCCCc-eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCC
Q 043828          229 FGLSIFFKPGEQ-FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP  306 (586)
Q Consensus       229 fg~a~~~~~~~~-~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  306 (586)
                      ||+++....... ..+.+|||+||+||.+. .+|+.++||||+||++|||+.-++||.+.+-.++..+|.++.++.  -+
T Consensus       172 fGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~--~p  249 (375)
T KOG0591|consen  172 FGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPP--LP  249 (375)
T ss_pred             chhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCC--Cc
Confidence            999998865543 34689999999999997 579999999999999999999999999999999999999996542  22


Q ss_pred             CCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCcc
Q 043828          307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK  342 (586)
Q Consensus       307 ~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~  342 (586)
                      -..+|.++..||..|+..||..||+.     +|++.
T Consensus       250 ~~~YS~~l~~li~~ci~vd~~~RP~t-----~~~v~  280 (375)
T KOG0591|consen  250 DEHYSTDLRELINMCIAVDPEQRPDT-----VPYVQ  280 (375)
T ss_pred             HHHhhhHHHHHHHHHccCCcccCCCc-----chHHH
Confidence            24689999999999999999999987     55554

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-50  Score=402.18  Aligned_cols=258  Identities=33%  Similarity=0.552  Sum_probs=226.5

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      +.....|....+||+|+.|.||.++...+++.||+|++....-.   ..+-+.+|+.+|+.+ +|+|||++++.|...+.
T Consensus       269 ~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~---~keLilnEi~Vm~~~-~H~NiVnfl~Sylv~de  344 (550)
T KOG0578|consen  269 GDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP---KKELLLNEILVMRDL-HHPNIVNFLDSYLVGDE  344 (550)
T ss_pred             CChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC---chhhhHHHHHHHHhc-cchHHHHHHHHhcccce
Confidence            34456899999999999999999999999999999999876533   346789999999999 99999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|+||||++||+|.+.+.. ..++|.+++.|++.++.||.|||.+||+|||||.+|||+   ..++.+||+|||+|..+.
T Consensus       345 LWVVMEym~ggsLTDvVt~-~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL---~~~g~vKltDFGFcaqi~  420 (550)
T KOG0578|consen  345 LWVVMEYMEGGSLTDVVTK-TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILL---TMDGSVKLTDFGFCAQIS  420 (550)
T ss_pred             eEEEEeecCCCchhhhhhc-ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEe---ccCCcEEEeeeeeeeccc
Confidence            9999999999999887755 459999999999999999999999999999999999999   677889999999998876


Q ss_pred             CCC-ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHH-hCccCCCCCCCCCCCHH
Q 043828          237 PGE-QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAII-RGKIDFERDPWPKVSKE  313 (586)
Q Consensus       237 ~~~-~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~  313 (586)
                      ... ...+.+|||+|||||++. ..|++++||||||++++||+-|++||...++..-+..|. ++...+  ..+.++|+.
T Consensus       421 ~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~l--k~~~klS~~  498 (550)
T KOG0578|consen  421 EEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKL--KNPEKLSPE  498 (550)
T ss_pred             cccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCc--CCccccCHH
Confidence            544 556789999999999997 579999999999999999999999999766655444443 343333  345689999


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +++|+.+||..||.+|++|.|+|+||||+..
T Consensus       499 ~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a  529 (550)
T KOG0578|consen  499 LKDFLDRCLVVDVEQRASAKELLEHPFLKMA  529 (550)
T ss_pred             HHHHHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence            9999999999999999999999999999643

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.9e-50  Score=384.23  Aligned_cols=256  Identities=38%  Similarity=0.700  Sum_probs=242.3

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      +...+|++.+.||+|.||.|-+|++...|+.||||.|++..++.+.++-.+++||+||..| +||||+.+|++|+..+.+
T Consensus        50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL-NHPhII~IyEVFENkdKI  128 (668)
T KOG0611|consen   50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL-NHPHIIQIYEVFENKDKI  128 (668)
T ss_pred             chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc-CCCceeehhhhhcCCceE
Confidence            4556899999999999999999999899999999999999999999999999999999999 999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      .|||||..+|.|++++.+.+.+++..++.+++||+.|+.|||+++++|||||.+|||+   +.++++||+|||++..+..
T Consensus       129 vivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL---D~N~NiKIADFGLSNly~~  205 (668)
T KOG0611|consen  129 VIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL---DQNNNIKIADFGLSNLYAD  205 (668)
T ss_pred             EEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheee---cCCCCeeeeccchhhhhcc
Confidence            9999999999999999999999999999999999999999999999999999999999   7889999999999999888


Q ss_pred             CCceecccCCccccchhhhhc-cC-CCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLRR-NY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~~-~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      .....++||+|.|.+||++.+ .| ++.+|-|||||+||.|+.|..||.+.+...+...|.++.+.-+.     .+..+.
T Consensus       206 ~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~-----~PSdA~  280 (668)
T KOG0611|consen  206 KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPE-----TPSDAS  280 (668)
T ss_pred             ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCC-----CCchHH
Confidence            888889999999999999986 44 78899999999999999999999999999999999999886554     456789


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcCCCcc
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLENPWIK  342 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~hp~~~  342 (586)
                      -||+.||-.||.+|.|+.+|..|.|+.
T Consensus       281 gLIRwmLmVNP~RRATieDiAsHWWvN  307 (668)
T KOG0611|consen  281 GLIRWMLMVNPERRATIEDIASHWWVN  307 (668)
T ss_pred             HHHHHHHhcCcccchhHHHHhhhheee
Confidence            999999999999999999999999986

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=4.9e-49  Score=367.00  Aligned_cols=263  Identities=29%  Similarity=0.449  Sum_probs=226.8

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe--C
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED--K  154 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~--~  154 (586)
                      ....+.|+.+..|++|+||+||+|+++.|++.||+|+++.+.-+....+ ...+||.+|.++ +|||||.+-++...  -
T Consensus        72 Crsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPI-tsLREIniLl~~-~H~NIV~vkEVVvG~~~  149 (419)
T KOG0663|consen   72 CRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPI-TSLREINILLKA-RHPNIVEVKEVVVGSNM  149 (419)
T ss_pred             cccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcc-hhHHHHHHHHhc-CCCCeeeeEEEEecccc
Confidence            3456789999999999999999999999999999999987765444443 346799999999 79999999998764  3


Q ss_pred             CeEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          155 DAIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                      +.+|||||||+. +|..++.+- .++...++..++.|++.|++|||.++|+||||||+|+|+   ...|.+||+|||+|+
T Consensus       150 d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm---~~~G~lKiaDFGLAR  225 (419)
T KOG0663|consen  150 DKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLL---SHKGILKIADFGLAR  225 (419)
T ss_pred             ceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheee---ccCCcEEecccchhh
Confidence            679999999976 888888764 479999999999999999999999999999999999999   678999999999999


Q ss_pred             ccCCC-CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCC--
Q 043828          234 FFKPG-EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP--  308 (586)
Q Consensus       234 ~~~~~-~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~--  308 (586)
                      .+... ..++..+-|.+|+|||++-+  .|+.++|+||+|||+.||+++.+.|.+.+..+.+..|.+.........|+  
T Consensus       226 ~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~  305 (419)
T KOG0663|consen  226 EYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGY  305 (419)
T ss_pred             hhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCc
Confidence            88644 55677889999999999864  69999999999999999999999999999988888887643333332232  


Q ss_pred             --------------------------CCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          309 --------------------------KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       309 --------------------------~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                                                .++....+|+..+|..||.+|.||.|+|+|+||....
T Consensus       306 ~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P  368 (419)
T KOG0663|consen  306 SELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETP  368 (419)
T ss_pred             cccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCC
Confidence                                      1457889999999999999999999999999998743

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7e-49  Score=379.32  Aligned_cols=260  Identities=30%  Similarity=0.481  Sum_probs=229.7

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .+.|++.+.||.|..++||+|++..+++.||||++..+.....  .+.+++|+..|..+ +||||++++..|..++.+|+
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~--ld~l~kE~~~msl~-~HPNIv~~~~sFvv~~~LWv  101 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND--LDALRKEVQTMSLI-DHPNIVTYHCSFVVDSELWV  101 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh--HHHHHHHHHHhhhc-CCCCcceEEEEEEecceeEE
Confidence            3689999999999999999999999999999999998887654  68999999999988 99999999999999999999


Q ss_pred             EEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          160 VMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      ||.||.+|++.+++...  ..+.|..++.|.++++.||.|||++|.||||||+.|||+   +.+|.|||+|||.+..+-.
T Consensus       102 VmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi---~~dG~VkLadFgvsa~l~~  178 (516)
T KOG0582|consen  102 VMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILI---DSDGTVKLADFGVSASLFD  178 (516)
T ss_pred             eehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEE---cCCCcEEEcCceeeeeecc
Confidence            99999999999999863  459999999999999999999999999999999999999   7889999999998765432


Q ss_pred             C-Cc----eecccCCccccchhhhh---ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCC------C
Q 043828          238 G-EQ----FCEIVGSPYYMAPEVLR---RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF------E  303 (586)
Q Consensus       238 ~-~~----~~~~~gt~~y~aPE~l~---~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~------~  303 (586)
                      . ..    ..+.+|||.|||||++.   ..|+.|+||||||++..||.+|..||....+.+++..-.++..+.      +
T Consensus       179 ~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~  258 (516)
T KOG0582|consen  179 SGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLD  258 (516)
T ss_pred             cCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCC
Confidence            2 11    14568999999999965   369999999999999999999999999999888777666665532      2


Q ss_pred             CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       304 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      .+.....+..++.+|..||.+||++|||+.++|+|+||+...
T Consensus       259 ~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k  300 (516)
T KOG0582|consen  259 KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAK  300 (516)
T ss_pred             hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhcc
Confidence            222345778999999999999999999999999999998754

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=8.7e-49  Score=375.81  Aligned_cols=263  Identities=30%  Similarity=0.506  Sum_probs=237.9

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      -.+.|++++.||.|.-|+||+|....++..+|+|++.+..+.......++..|-+||..+ +||.++.||..|+.+...|
T Consensus        75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l-DHPFlPTLYa~fet~~~~c  153 (459)
T KOG0610|consen   75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL-DHPFLPTLYASFETDKYSC  153 (459)
T ss_pred             CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc-CCCccchhhheeeccceeE
Confidence            356899999999999999999999999999999999998887766678889999999999 9999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          159 LVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|||||+||+|..+++.+  +.+++..++.++..++.||+|||-.|||+|||||+|||+   .++|+|-|+||.++....
T Consensus       154 l~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILv---redGHIMLsDFDLS~~~~  230 (459)
T KOG0610|consen  154 LVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILV---REDGHIMLSDFDLSLRCP  230 (459)
T ss_pred             EEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEE---ecCCcEEeeeccccccCC
Confidence            999999999999888763  569999999999999999999999999999999999999   688999999999864321


Q ss_pred             C---------------------------------C-C-----------------------ceecccCCccccchhhhhc-
Q 043828          237 P---------------------------------G-E-----------------------QFCEIVGSPYYMAPEVLRR-  258 (586)
Q Consensus       237 ~---------------------------------~-~-----------------------~~~~~~gt~~y~aPE~l~~-  258 (586)
                      .                                 . .                       .....+||-.|+|||++++ 
T Consensus       231 ~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~  310 (459)
T KOG0610|consen  231 VSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGE  310 (459)
T ss_pred             CCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecC
Confidence            0                                 0 0                       1123589999999999985 


Q ss_pred             cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCC----HHH
Q 043828          259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLT----LEE  334 (586)
Q Consensus       259 ~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps----~~e  334 (586)
                      ..+.++|+|+|||++|||+.|..||.+.+..+++.+|......|+..+  .++..++|||+++|.+||++|..    |.|
T Consensus       311 GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~--~vs~~akDLIr~LLvKdP~kRlg~~rGA~e  388 (459)
T KOG0610|consen  311 GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEP--EVSSAAKDLIRKLLVKDPSKRLGSKRGAAE  388 (459)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCC--cchhHHHHHHHHHhccChhhhhccccchHH
Confidence            689999999999999999999999999999999999999999998875  78999999999999999999998    999


Q ss_pred             HhcCCCccCCCCC
Q 043828          335 VLENPWIKNDNHA  347 (586)
Q Consensus       335 il~hp~~~~~~~~  347 (586)
                      |.+||||++.+.+
T Consensus       389 IK~HpFF~gVnWa  401 (459)
T KOG0610|consen  389 IKRHPFFEGVNWA  401 (459)
T ss_pred             hhcCccccCCChh
Confidence            9999999987654

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.6e-50  Score=358.04  Aligned_cols=255  Identities=33%  Similarity=0.587  Sum_probs=238.5

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++++.||+|-||.||.|+.+.++..+|+|++-++.+.......++.+|++|-..| +||||+++|++|.+...+|+
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L-~hpnilrlY~~fhd~~riyL   99 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHL-RHPNILRLYGYFHDSKRIYL   99 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeeccc-CCccHHhhhhheeccceeEE
Confidence            47899999999999999999999999999999999998877776778999999999999 99999999999999999999


Q ss_pred             EEeccCCCChHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          160 VMELCEGGELFDRIV--NKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      ++||.++|+|+..|.  ...++++..++.+++|++.|+.|||.++|+||||||+|+|+   ...+.+||+|||-+...+ 
T Consensus       100 ilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLl---g~~~~lkiAdfGwsV~~p-  175 (281)
T KOG0580|consen  100 ILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAP-  175 (281)
T ss_pred             EEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhcc---CCCCCeeccCCCceeecC-
Confidence            999999999999998  56779999999999999999999999999999999999999   678899999999988765 


Q ss_pred             CCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      .....+.|||..|.+||+..+ .++..+|+|++|++.||++.|.+||...+..+....|.+..+.+|    ..++.++.|
T Consensus       176 ~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p----~~is~~a~d  251 (281)
T KOG0580|consen  176 SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP----STISGGAAD  251 (281)
T ss_pred             CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC----cccChhHHH
Confidence            555667899999999999974 689999999999999999999999999999999999999988887    468999999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      ||.+||.++|.+|.+..|++.|||+..
T Consensus       252 lI~~ll~~~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  252 LISRLLVKNPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             HHHHHhccCccccccHHHHhhhHHHHh
Confidence            999999999999999999999999964

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-49  Score=384.20  Aligned_cols=257  Identities=32%  Similarity=0.518  Sum_probs=216.2

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC--eEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD--AIY  158 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~--~~~  158 (586)
                      .+|..++.||+|+||.||++.+..+|..+|+|.+......   ..+.+.+|+.+|.+| +|||||++++......  .++
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~---~~~~l~~Ei~iL~~l-~~p~IV~~~G~~~~~~~~~~~   92 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP---TSESLEREIRILSRL-NHPNIVQYYGSSSSRENDEYN   92 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccch---hHHHHHHHHHHHHhC-CCCCEEeeCCccccccCeeeE
Confidence            4688999999999999999999999999999998766211   157799999999999 6999999999755444  699


Q ss_pred             EEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCC-CCceEEeecccccccC
Q 043828          159 LVMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSE-NSQLKAIDFGLSIFFK  236 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~-~~~vkl~Dfg~a~~~~  236 (586)
                      |+|||+++|+|.+++.+.+ .+++..++.+.+||+.||.|||++|||||||||+|||+   +. ++.+||+|||++....
T Consensus        93 i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl---~~~~~~~KlaDFG~a~~~~  169 (313)
T KOG0198|consen   93 IFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILL---DPSNGDVKLADFGLAKKLE  169 (313)
T ss_pred             eeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEE---eCCCCeEEeccCccccccc
Confidence            9999999999999999876 79999999999999999999999999999999999999   45 6899999999998765


Q ss_pred             C----CCceecccCCccccchhhhhccCC--CcchHHHHHHHHHHHhhCCCCCCC-CCHHHHHHHHHhCccCCCCCCCCC
Q 043828          237 P----GEQFCEIVGSPYYMAPEVLRRNYG--PEIDVWSAGVIIYILLCGVPPFWA-ETEEGIAHAIIRGKIDFERDPWPK  309 (586)
Q Consensus       237 ~----~~~~~~~~gt~~y~aPE~l~~~~~--~~~DiwslG~il~~ll~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~  309 (586)
                      .    ........||+.|||||++...+.  +++|||||||++.||+||.+||.. .......-.+...... | ...+.
T Consensus       170 ~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~-P-~ip~~  247 (313)
T KOG0198|consen  170 SKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSL-P-EIPDS  247 (313)
T ss_pred             cccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCC-C-CCCcc
Confidence            3    122345789999999999984433  489999999999999999999987 3333433444433321 2 22346


Q ss_pred             CCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCCC
Q 043828          310 VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH  346 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~  346 (586)
                      +|.++++||.+||..||.+||||.++|+|||.+....
T Consensus       248 ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  248 LSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             cCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence            8999999999999999999999999999999986543

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-49  Score=365.56  Aligned_cols=269  Identities=36%  Similarity=0.623  Sum_probs=239.4

Q ss_pred             CCcccCeeec-ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           77 GNILDKYTFG-KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        77 ~~~~~~y~~~-~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      +.+.+-|++. +.||+|+||.|-.|+...+|..||||+|.+..   .....++.+|++++.+..+|+||++++++|+++.
T Consensus        73 g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~---gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~  149 (463)
T KOG0607|consen   73 GKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP---GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT  149 (463)
T ss_pred             chHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCC---chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc
Confidence            4566677776 57999999999999999999999999998873   3446789999999999999999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      .+|+|||-|.||+|...|..+..+++..+..+++.|+.||.+||.+||.||||||+|||..+.+.-.-||||||.++..+
T Consensus       150 ~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~  229 (463)
T KOG0607|consen  150 RFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGI  229 (463)
T ss_pred             eEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999987666778999999987654


Q ss_pred             CCC--------CceecccCCccccchhhhh------ccCCCcchHHHHHHHHHHHhhCCCCCCCCC--------------
Q 043828          236 KPG--------EQFCEIVGSPYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPFWAET--------------  287 (586)
Q Consensus       236 ~~~--------~~~~~~~gt~~y~aPE~l~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------------  287 (586)
                      ..+        ....+.+|+..|||||+..      ..|+.++|.||||||||.|++|++||.+.-              
T Consensus       230 k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~  309 (463)
T KOG0607|consen  230 KLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRV  309 (463)
T ss_pred             ccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHH
Confidence            321        2345678999999999863      248999999999999999999999996531              


Q ss_pred             -HHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCCCCC
Q 043828          288 -EEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP  348 (586)
Q Consensus       288 -~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~~~  348 (586)
                       ...+.+.|..+.+.||...|-.+|.++++||..+|..|+.+|.++.++++|||++......
T Consensus       310 CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~ek  371 (463)
T KOG0607|consen  310 CQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPEK  371 (463)
T ss_pred             HHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchhc
Confidence             2467899999999999999999999999999999999999999999999999999865443

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-48  Score=370.32  Aligned_cols=263  Identities=32%  Similarity=0.522  Sum_probs=225.2

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe----
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED----  153 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~----  153 (586)
                      .+...|...+.||.|+||.|+.+.++.+|+.||+|++... +......++..+|+.+|+.+ +|+||+.+.+++..    
T Consensus        19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~-F~~~~~akRtlRElklLr~~-~HeNIi~l~di~~p~~~~   96 (359)
T KOG0660|consen   19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP-FENQIDAKRTLRELKLLRHL-RHENIIGLLDIFRPPSRD   96 (359)
T ss_pred             eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhh-hhchHHHHHHHHHHHHHHHh-cCCCcceEEeeccccccc
Confidence            4456777789999999999999999999999999999643 44566778899999999999 79999999999865    


Q ss_pred             -CCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          154 -KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       154 -~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                       -+.+|+|+|+| +-+|...++.+..+++..++.+++||+.||+|+|+-+|+||||||+|+++   +.+..+||+|||+|
T Consensus        97 ~f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~---n~~c~lKI~DFGLA  172 (359)
T KOG0660|consen   97 KFNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLL---NADCDLKICDFGLA  172 (359)
T ss_pred             ccceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheee---ccCCCEEeccccce
Confidence             35799999999 56899888888779999999999999999999999999999999999999   67788999999999


Q ss_pred             cccCC---CCceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhC---------
Q 043828          233 IFFKP---GEQFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRG---------  298 (586)
Q Consensus       233 ~~~~~---~~~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~---------  298 (586)
                      +....   ...++..+.|.+|+|||++.  ..|+.+.||||+|||+.||++|++.|.+.+.-..+..|..-         
T Consensus       173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l  252 (359)
T KOG0660|consen  173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDL  252 (359)
T ss_pred             eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHH
Confidence            98854   44557788999999999985  47999999999999999999999999887665554444321         


Q ss_pred             --------------ccCCCCC----CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCCC
Q 043828          299 --------------KIDFERD----PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH  346 (586)
Q Consensus       299 --------------~~~~~~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~  346 (586)
                                    ....+..    .+++.++.+.+|+.+||..||.+|+|++|+|.|||+.....
T Consensus       253 ~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hd  318 (359)
T KOG0660|consen  253 QKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHD  318 (359)
T ss_pred             HHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcC
Confidence                          1112222    24678999999999999999999999999999999987543

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=2.3e-47  Score=387.68  Aligned_cols=256  Identities=30%  Similarity=0.589  Sum_probs=228.7

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++.+.||+|+||.||+|++..+|+.||+|++.+.........+.+.+|+.+++++ +||||+++++++.+++.+|
T Consensus        16 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~   94 (329)
T PTZ00263         16 KLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL-SHPFIVNMMCSFQDENRVY   94 (329)
T ss_pred             CchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEcCCEEE
Confidence            357899999999999999999999999999999999876544444456788999999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      +||||++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++......
T Consensus        95 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~  171 (329)
T PTZ00263         95 FLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLL---DNKGHVKVTDFGFAKKVPDR  171 (329)
T ss_pred             EEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE---CCCCCEEEeeccCceEcCCC
Confidence            999999999999999988889999999999999999999999999999999999999   67789999999999876432


Q ss_pred             CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          239 EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                        .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+..+...++.    .++..+++|
T Consensus       172 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~----~~~~~~~~l  245 (329)
T PTZ00263        172 --TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN----WFDGRARDL  245 (329)
T ss_pred             --cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCC----CCCHHHHHH
Confidence              234579999999999864 5889999999999999999999999998888888888877655442    478899999


Q ss_pred             HHHccCCCCCCCCC-----HHHHhcCCCccCC
Q 043828          318 VKNMLDPNPYNRLT-----LEEVLENPWIKND  344 (586)
Q Consensus       318 i~~~L~~dp~~Rps-----~~eil~hp~~~~~  344 (586)
                      |.+||+.||.+||+     +++++.||||+..
T Consensus       246 i~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~  277 (329)
T PTZ00263        246 VKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA  277 (329)
T ss_pred             HHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence            99999999999997     7999999999864

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-47  Score=382.41  Aligned_cols=254  Identities=30%  Similarity=0.546  Sum_probs=226.7

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|++...........+.+.+|+.+++++ +||||+++++++.+...+|+|
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv   79 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV-SHPFIIRLFWTEHDQRFLYML   79 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC-CCCcHhhhHhhhccCCeEEEE
Confidence            4799999999999999999999999999999999765443333456788999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCc
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ  240 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~  240 (586)
                      |||+++|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++......  
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli---~~~~~~kl~Dfg~~~~~~~~--  154 (291)
T cd05612          80 MEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILL---DKEGHIKLTDFGFAKKLRDR--  154 (291)
T ss_pred             EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEEecCcchhccCC--
Confidence            9999999999999988889999999999999999999999999999999999999   56789999999998865432  


Q ss_pred             eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHH
Q 043828          241 FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK  319 (586)
Q Consensus       241 ~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  319 (586)
                      ....+||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+..+...++.    .++..+++||+
T Consensus       155 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~li~  230 (291)
T cd05612         155 TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR----HLDLYAKDLIK  230 (291)
T ss_pred             cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCc----cCCHHHHHHHH
Confidence            234579999999999864 5889999999999999999999999999888888888887765543    46889999999


Q ss_pred             HccCCCCCCCCC-----HHHHhcCCCccCC
Q 043828          320 NMLDPNPYNRLT-----LEEVLENPWIKND  344 (586)
Q Consensus       320 ~~L~~dp~~Rps-----~~eil~hp~~~~~  344 (586)
                      +||+.||.+||+     ++++++||||+..
T Consensus       231 ~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~  260 (291)
T cd05612         231 KLLVVDRTRRLGNMKNGADDVKNHRWFKSV  260 (291)
T ss_pred             HHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence            999999999995     9999999999854

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-48  Score=378.61  Aligned_cols=267  Identities=37%  Similarity=0.662  Sum_probs=243.1

Q ss_pred             CCCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           76 EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        76 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      .+.+.+-|.+.+.||+|.|++|-+|++.-+|..||||+|.+.++... ....+..|+..|+-+ +|||||++|++.....
T Consensus        13 DgkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~-st~hlfqEVRCMKLV-QHpNiVRLYEViDTQT   90 (864)
T KOG4717|consen   13 DGKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL-STGHLFQEVRCMKLV-QHPNIVRLYEVIDTQT   90 (864)
T ss_pred             ccceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchh-hhhHHHHHHHHHHHh-cCcCeeeeeehhcccc
Confidence            35667789999999999999999999999999999999998876543 345677899999877 9999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      .+|+|+|+-++|+|+++|..+ ..+.+..+..++.||+.|+.|||+..+|||||||+||.+.  ..-|.|||.|||++..
T Consensus        91 KlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF--EKlGlVKLTDFGFSNk  168 (864)
T KOG4717|consen   91 KLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF--EKLGLVKLTDFGFSNK  168 (864)
T ss_pred             eEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe--eecCceEeeecccccc
Confidence            999999999999999999764 5699999999999999999999999999999999999987  5678999999999999


Q ss_pred             cCCCCceecccCCccccchhhhhc-cC-CCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCH
Q 043828          235 FKPGEQFCEIVGSPYYMAPEVLRR-NY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       235 ~~~~~~~~~~~gt~~y~aPE~l~~-~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      +.++....+.||+..|.|||++-+ .| .+++||||||||||.|++|++||...+..+.+-.|+..++..|.    .++.
T Consensus       169 f~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPs----hvS~  244 (864)
T KOG4717|consen  169 FQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPS----HVSK  244 (864)
T ss_pred             CCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCch----hhhH
Confidence            999999999999999999999865 46 46799999999999999999999999999999999999887764    6899


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhcCCCccCCCCCCCc
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNV  350 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~~~~~  350 (586)
                      ++++||..||..||++|.|.++|..|+|++........
T Consensus       245 eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~sT  282 (864)
T KOG4717|consen  245 ECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGLST  282 (864)
T ss_pred             HHHHHHHHHHhcCchhhccHHHHhccccccCCCCCccc
Confidence            99999999999999999999999999999987654443

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=6.3e-47  Score=389.85  Aligned_cols=259  Identities=29%  Similarity=0.475  Sum_probs=222.6

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|+||+||+|.+..+++.||+|++.+...........+.+|+.++..+ +||||+++++.+.+...+|+|
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~-~~~~iv~~~~~~~~~~~~~lv   79 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEA-DSLWVVKMFYSFQDKLNLYLI   79 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCeEEEE
Confidence            4799999999999999999999999999999999875443344456788999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-  239 (586)
                      ||||+||+|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||+   +.++.+||+|||++....... 
T Consensus        80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi---~~~~~vkL~DFGla~~~~~~~~  156 (363)
T cd05628          80 MEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLL---DSKGHVKLSDFGLCTGLKKAHR  156 (363)
T ss_pred             EcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCCEEEeeccCccccccccc
Confidence            9999999999999988899999999999999999999999999999999999999   567899999999987542110 


Q ss_pred             -----------------------------------ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCC
Q 043828          240 -----------------------------------QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPF  283 (586)
Q Consensus       240 -----------------------------------~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf  283 (586)
                                                         .....+||+.|+|||++. ..++.++|||||||++|+|++|..||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf  236 (363)
T cd05628         157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF  236 (363)
T ss_pred             ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCC
Confidence                                               012357999999999986 46899999999999999999999999


Q ss_pred             CCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCC---CCCCHHHHhcCCCccCC
Q 043828          284 WAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPY---NRLTLEEVLENPWIKND  344 (586)
Q Consensus       284 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~---~Rps~~eil~hp~~~~~  344 (586)
                      .+.+..+....+.........++...+++++++||.+|+. +|.   .||+++|+++||||+..
T Consensus       237 ~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~  299 (363)
T cd05628         237 CSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV  299 (363)
T ss_pred             CCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence            9988888888877644333333334588999999999775 444   45899999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=3.9e-47  Score=385.09  Aligned_cols=250  Identities=32%  Similarity=0.571  Sum_probs=222.0

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG  166 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~g  166 (586)
                      +.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++++ +||||+++++++...+.+|+||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~~   79 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT-RHPFLTALKYSFQTHDRLCFVMEYANG   79 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence            4699999999999999999999999999876544444456778899999999 899999999999999999999999999


Q ss_pred             CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC-CCCceeccc
Q 043828          167 GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIV  245 (586)
Q Consensus       167 g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~~~~~~~~  245 (586)
                      |+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.... ........+
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll---~~~~~~kl~DfG~a~~~~~~~~~~~~~~  156 (323)
T cd05571          80 GELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFC  156 (323)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---CCCCCEEEeeCCCCcccccCCCccccee
Confidence            9999999888889999999999999999999999999999999999999   567899999999987532 223334567


Q ss_pred             CCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCC
Q 043828          246 GSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDP  324 (586)
Q Consensus       246 gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  324 (586)
                      ||+.|+|||++. ..++.++|||||||++|+|++|..||...+.......+..+...++    ..++.++.+||.+||..
T Consensus       157 gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~  232 (323)
T cd05571         157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTLSPEAKSLLAGLLKK  232 (323)
T ss_pred             cCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHccC
Confidence            999999999986 4689999999999999999999999999888888888777766554    35889999999999999


Q ss_pred             CCCCCC-----CHHHHhcCCCccCC
Q 043828          325 NPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       325 dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      ||++||     ++.++++||||...
T Consensus       233 dP~~R~~~~~~~~~~ll~h~~f~~~  257 (323)
T cd05571         233 DPKQRLGGGPEDAKEIMEHRFFASI  257 (323)
T ss_pred             CHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            999999     89999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=9e-47  Score=375.76  Aligned_cols=259  Identities=30%  Similarity=0.472  Sum_probs=218.2

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      .|++.+.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++++ +||||+++++++.+.+.+++||
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~iv~~~~~~~~~~~~~lv~   79 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-NSRFVVSLAYAYETKDALCLVL   79 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEEEEEccCCeEEEEE
Confidence            378899999999999999999999999999999876544333345678899999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          162 ELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       162 E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      ||+++|+|..++...  ..+++..+..++.|++.||.|||+.+|+||||||+|||+   +.++.+||+|||++.......
T Consensus        80 e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill---~~~~~~kl~Dfg~~~~~~~~~  156 (285)
T cd05631          80 TIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILL---DDRGHIRISDLGLAVQIPEGE  156 (285)
T ss_pred             EecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE---CCCCCEEEeeCCCcEEcCCCC
Confidence            999999998877643  368999999999999999999999999999999999999   567889999999998765544


Q ss_pred             ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHH
Q 043828          240 QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV  318 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  318 (586)
                      ......||+.|+|||++. ..++.++|||||||++|+|++|..||...........+..............++..+.+||
T Consensus       157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li  236 (285)
T cd05631         157 TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSIC  236 (285)
T ss_pred             eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHH
Confidence            455668999999999986 4689999999999999999999999987654322222222211122222346889999999


Q ss_pred             HHccCCCCCCCCC-----HHHHhcCCCccCC
Q 043828          319 KNMLDPNPYNRLT-----LEEVLENPWIKND  344 (586)
Q Consensus       319 ~~~L~~dp~~Rps-----~~eil~hp~~~~~  344 (586)
                      .+||+.||.+||+     ++++++||||...
T Consensus       237 ~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~  267 (285)
T cd05631         237 RMLLTKNPKERLGCRGNGAAGVKQHPIFKNI  267 (285)
T ss_pred             HHHhhcCHHHhcCCCCCCHHHHhcCHhhcCC
Confidence            9999999999997     8999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.3e-47  Score=390.05  Aligned_cols=259  Identities=31%  Similarity=0.538  Sum_probs=225.1

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|+||+||+|++..+|+.||+|++.+...........+.+|+.+++.+ +||||+++++++.+++.+|||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv   79 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-DNPWVVKLYYSFQDENYLYLI   79 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCeEEEE
Confidence            3799999999999999999999999999999999865443333456788999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-  239 (586)
                      ||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++....... 
T Consensus        80 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~~~  156 (364)
T cd05599          80 MEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLL---DAKGHIKLSDFGLCTGLKKSHR  156 (364)
T ss_pred             ECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEeecccceecccccc
Confidence            9999999999999888889999999999999999999999999999999999999   677899999999986542111 


Q ss_pred             --------------------------------------ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCC
Q 043828          240 --------------------------------------QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGV  280 (586)
Q Consensus       240 --------------------------------------~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~  280 (586)
                                                            .....+||+.|+|||++. ..++.++|||||||++|+|++|.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~  236 (364)
T cd05599         157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY  236 (364)
T ss_pred             ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCC
Confidence                                                  011246999999999986 46899999999999999999999


Q ss_pred             CCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCC---HHHHhcCCCccCC
Q 043828          281 PPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLT---LEEVLENPWIKND  344 (586)
Q Consensus       281 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps---~~eil~hp~~~~~  344 (586)
                      +||...+.......+......+..+....+++.+++||.+||. +|.+|++   +.+++.||||+..
T Consensus       237 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~  302 (364)
T cd05599         237 PPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV  302 (364)
T ss_pred             CCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence            9999988887777776654444433334689999999999997 9999998   9999999999864

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=8.4e-47  Score=384.40  Aligned_cols=256  Identities=29%  Similarity=0.524  Sum_probs=227.3

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCC-cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETG-ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~-~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ..++|++.+.||+|+||.||+|.+..++ ..||+|++.+.........+.+.+|+.+++.+ +||||+++++++.+.+.+
T Consensus        28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~  106 (340)
T PTZ00426         28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI-NHPFCVNLYGSFKDESYL  106 (340)
T ss_pred             ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCCcceEEEEEeCCEE
Confidence            3468999999999999999999876554 68999999766544444456788999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |+||||++||+|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.....
T Consensus       107 ~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~ikL~DFG~a~~~~~  183 (340)
T PTZ00426        107 YLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL---DKDGFIKMTDFGFAKVVDT  183 (340)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEecCCCCeecCC
Confidence            9999999999999999988889999999999999999999999999999999999999   5678999999999986543


Q ss_pred             CCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      .  ....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||...+.......+..+...++    +.++..+.+
T Consensus       184 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~  257 (340)
T PTZ00426        184 R--TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFP----KFLDNNCKH  257 (340)
T ss_pred             C--cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHH
Confidence            2  345679999999999864 588999999999999999999999999988888888887776554    357899999


Q ss_pred             HHHHccCCCCCCCC-----CHHHHhcCCCccCC
Q 043828          317 LVKNMLDPNPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       317 li~~~L~~dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      +|++||+.||.+|+     +++++++||||++.
T Consensus       258 li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~  290 (340)
T PTZ00426        258 LMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI  290 (340)
T ss_pred             HHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            99999999999995     89999999999864

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=7.3e-47  Score=359.94  Aligned_cols=259  Identities=29%  Similarity=0.473  Sum_probs=223.8

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCC-eeEEEEEEEeCC---
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN-IVTYKEAYEDKD---  155 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpn-Iv~l~~~~~~~~---  155 (586)
                      +..|..+++||+|+||+||+|+.+.+|+.||+|+++.+.-... .-....+|+.+|+.| +|+| ||.+++++...+   
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG-~P~taiREisllk~L-~~~~~iv~L~dv~~~~~~~~   87 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEG-VPSTAIREISLLKRL-SHANHIVRLHDVIHTSNNHR   87 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccC-CCchhhHHHHHHHHh-CCCcceEEEEeeeeeccccc
Confidence            5678999999999999999999999999999999987654322 235678899999999 8999 999999998877   


Q ss_pred             ---eEEEEEeccCCCChHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEee
Q 043828          156 ---AIYLVMELCEGGELFDRIVNKG----HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID  228 (586)
Q Consensus       156 ---~~~iv~E~~~gg~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~D  228 (586)
                         .+++|+||++ -+|..++....    .++...++.+++||+.||+|||+++|+||||||.|||+   +..+.+||+|
T Consensus        88 ~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi---~~~G~lKlaD  163 (323)
T KOG0594|consen   88 GIGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLI---SSSGVLKLAD  163 (323)
T ss_pred             ccceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEE---CCCCcEeeec
Confidence               8999999995 58988887644    57889999999999999999999999999999999999   6689999999


Q ss_pred             cccccccC-CCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCC
Q 043828          229 FGLSIFFK-PGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD  305 (586)
Q Consensus       229 fg~a~~~~-~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~  305 (586)
                      ||+|+... +.......++|.+|+|||++-+  .|+...||||+|||++||+++++.|.+.+..+.+..|.+-.......
T Consensus       164 FGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~  243 (323)
T KOG0594|consen  164 FGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEK  243 (323)
T ss_pred             cchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCcc
Confidence            99999776 4455777889999999999864  59999999999999999999999999999988888776543333333


Q ss_pred             CCC--------------------------CCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          306 PWP--------------------------KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       306 ~~~--------------------------~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .||                          ..++...+++.+||+.+|.+|.|++.+|.||||...
T Consensus       244 ~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~  308 (323)
T KOG0594|consen  244 DWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL  308 (323)
T ss_pred             CCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence            332                          234589999999999999999999999999999865

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-46  Score=383.84  Aligned_cols=258  Identities=32%  Similarity=0.512  Sum_probs=226.2

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|+||.||+|++..+|+.||+|++.+...........+.+|+.++..+ +||||+++++++...+.+|||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~lv   79 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTT-KSEWLVKLLYAFQDDEYLYLA   79 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhC-CCCCCccEEEEEEcCCEEEEE
Confidence            3799999999999999999999999999999999876544333456788999999999 799999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCc
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ  240 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~  240 (586)
                      |||++||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +..+.+||+|||++.....  .
T Consensus        80 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kL~Dfg~a~~~~~--~  154 (333)
T cd05600          80 MEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLI---DASGHIKLTDFGLSKGIVT--Y  154 (333)
T ss_pred             EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEEEeCcCCccccc--c
Confidence            9999999999999888889999999999999999999999999999999999999   5678999999999976543  2


Q ss_pred             eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCC----CCCCHHHH
Q 043828          241 FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW----PKVSKEAK  315 (586)
Q Consensus       241 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~----~~~~~~~~  315 (586)
                      .....||+.|+|||++. ..++.++|||||||++|+|++|..||...+..+....+......+..+.+    ..++.++.
T Consensus       155 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~  234 (333)
T cd05600         155 ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAW  234 (333)
T ss_pred             cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHH
Confidence            34567999999999986 46899999999999999999999999988888777776654333322222    25789999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +||.+||..+|.+||++.++++||||...
T Consensus       235 ~li~~~l~~~~~rr~s~~~ll~h~~~~~~  263 (333)
T cd05600         235 DLITKLINDPSRRFGSLEDIKNHPFFKEV  263 (333)
T ss_pred             HHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence            99999999999999999999999999864

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-49  Score=381.28  Aligned_cols=254  Identities=29%  Similarity=0.471  Sum_probs=224.9

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ..|+..+.||+|+||.||+|.+..+++.||+|++..+....  .++.++.|+.+|..+ ++|||.++|+.|..+..+||+
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~d--eIediqqei~~Ls~~-~~~~it~yygsyl~g~~Lwii   89 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAED--EIEDIQQEISVLSQC-DSPNITEYYGSYLKGTKLWII   89 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcch--hhHHHHHHHHHHHhc-CcchHHhhhhheeecccHHHH
Confidence            35788899999999999999999999999999998886544  468899999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCc
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ  240 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~  240 (586)
                      ||||.||++.+.+.....+.+..+.-++++++.|+.|||..+.+|||||+.|||+   ...+.+||+|||.+..+.....
T Consensus        90 Mey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~---s~~g~vkl~DfgVa~ql~~~~~  166 (467)
T KOG0201|consen   90 MEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILL---SESGDVKLADFGVAGQLTNTVK  166 (467)
T ss_pred             HHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeE---eccCcEEEEecceeeeeechhh
Confidence            9999999999999888778999999999999999999999999999999999999   5669999999999988765432


Q ss_pred             -eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHH
Q 043828          241 -FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV  318 (586)
Q Consensus       241 -~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  318 (586)
                       ..+++|||.|||||++.+ .|+.++||||||++.+||++|.+|+....+..++..|.+...+.   .-..+++.+++||
T Consensus       167 rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~---L~~~~S~~~kEFV  243 (467)
T KOG0201|consen  167 RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPR---LDGDFSPPFKEFV  243 (467)
T ss_pred             ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCc---cccccCHHHHHHH
Confidence             367899999999999985 79999999999999999999999998877754444443332221   1125789999999


Q ss_pred             HHccCCCCCCCCCHHHHhcCCCccC
Q 043828          319 KNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       319 ~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      ..||++||+.||||.++|+|+|+++
T Consensus       244 ~~CL~k~P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  244 EACLDKNPEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             HHHhhcCcccCcCHHHHhhhHHHHh
Confidence            9999999999999999999999997

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=2.3e-46  Score=388.13  Aligned_cols=259  Identities=28%  Similarity=0.479  Sum_probs=221.7

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      .|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.+++.+ +||||+++++++.+.+.+|+||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~l~~~~~~~~~~~lv~   80 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVM   80 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc-CCCCeeeeEEEEecCCEEEEEE
Confidence            589999999999999999999999999999999876544444556789999999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC---
Q 043828          162 ELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG---  238 (586)
Q Consensus       162 E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~---  238 (586)
                      |||+||+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+   +..+.+||+|||++......   
T Consensus        81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili---~~~~~~kL~DFGl~~~~~~~~~~  157 (381)
T cd05626          81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILI---DLDGHIKLTDFGLCTGFRWTHNS  157 (381)
T ss_pred             ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEE---CCCCCEEEeeCcCCccccccccc
Confidence            999999999999888889999999999999999999999999999999999999   56789999999987532100   


Q ss_pred             ---------------------------------------------CceecccCCccccchhhhh-ccCCCcchHHHHHHH
Q 043828          239 ---------------------------------------------EQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVI  272 (586)
Q Consensus       239 ---------------------------------------------~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~i  272 (586)
                                                                   ......+||+.|+|||++. ..++.++|||||||+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i  237 (381)
T cd05626         158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI  237 (381)
T ss_pred             ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence                                                         0012357999999999986 468999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHcc--CCCCCCCCCHHHHhcCCCccCC
Q 043828          273 IYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNML--DPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       273 l~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L--~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +|+|++|..||...+.......+.........+.+..+++++++||.+||  ..+|..||++++++.||||...
T Consensus       238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~  311 (381)
T cd05626         238 LFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV  311 (381)
T ss_pred             HHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence            99999999999988877766666654433444444578999999999955  4555569999999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=2.2e-46  Score=388.73  Aligned_cols=258  Identities=31%  Similarity=0.519  Sum_probs=223.9

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      .|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.+++.+ +||||+++++.+.+++.+|+||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~-~h~~iv~~~~~~~~~~~~~lv~   80 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVM   80 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC-CCCcCCeEEEEEEeCCEEEEEE
Confidence            589999999999999999999999999999999765443344456788999999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC---
Q 043828          162 ELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG---  238 (586)
Q Consensus       162 E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~---  238 (586)
                      |||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++......   
T Consensus        81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl---~~~g~~kL~DFGla~~~~~~~~~  157 (382)
T cd05625          81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDS  157 (382)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEeECCCCccccccccc
Confidence            999999999999888889999999999999999999999999999999999999   67789999999997532100   


Q ss_pred             ---------------------------------------------CceecccCCccccchhhhh-ccCCCcchHHHHHHH
Q 043828          239 ---------------------------------------------EQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVI  272 (586)
Q Consensus       239 ---------------------------------------------~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~i  272 (586)
                                                                   ......+||+.|+|||++. ..|+.++|||||||+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi  237 (382)
T cd05625         158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI  237 (382)
T ss_pred             cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence                                                         0012347999999999986 468999999999999


Q ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCC---HHHHhcCCCccCC
Q 043828          273 IYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLT---LEEVLENPWIKND  344 (586)
Q Consensus       273 l~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps---~~eil~hp~~~~~  344 (586)
                      +|+|++|.+||...+..+....+.........+....+++++.+||.+|+ .+|.+|++   ++++++||||+..
T Consensus       238 l~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~  311 (382)
T cd05625         238 LYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI  311 (382)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence            99999999999998887777777665555555555678999999999987 59999997   9999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.7e-46  Score=377.14  Aligned_cols=248  Identities=29%  Similarity=0.559  Sum_probs=220.0

Q ss_pred             eccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCCCC
Q 043828           89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGE  168 (586)
Q Consensus        89 lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~gg~  168 (586)
                      ||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++++ +||||+++++++...+.+|+||||+++|+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g~   79 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV-NCPFIVPLKFSFQSPEKLYLVLAFINGGE   79 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence            79999999999999999999999999765544444556788899999999 89999999999999999999999999999


Q ss_pred             hHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC-CCceecccCC
Q 043828          169 LFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP-GEQFCEIVGS  247 (586)
Q Consensus       169 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~gt  247 (586)
                      |.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++..... .......+||
T Consensus        80 L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt  156 (312)
T cd05585          80 LFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL---DYQGHIALCDFGLCKLNMKDDDKTNTFCGT  156 (312)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE---CCCCcEEEEECcccccCccCCCccccccCC
Confidence            99999888889999999999999999999999999999999999999   5678999999999875432 2233456799


Q ss_pred             ccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCC
Q 043828          248 PYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNP  326 (586)
Q Consensus       248 ~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp  326 (586)
                      +.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+....+......++    ..+++.+++||.+||..||
T Consensus       157 ~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dp  232 (312)
T cd05585         157 PEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFP----DGFDRDAKDLLIGLLSRDP  232 (312)
T ss_pred             cccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCC----CcCCHHHHHHHHHHcCCCH
Confidence            99999999864 689999999999999999999999999888888888877765554    3578999999999999999


Q ss_pred             CCCC---CHHHHhcCCCccCC
Q 043828          327 YNRL---TLEEVLENPWIKND  344 (586)
Q Consensus       327 ~~Rp---s~~eil~hp~~~~~  344 (586)
                      .+||   ++.++|.||||...
T Consensus       233 ~~R~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         233 TRRLGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             HHcCCCCCHHHHHcCCCcCCC
Confidence            9997   58999999999864

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=2.7e-46  Score=385.36  Aligned_cols=260  Identities=31%  Similarity=0.507  Sum_probs=226.4

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.+ +||||+++++++.+++.+|+
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~-~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA-NSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEEEE
Confidence            46899999999999999999999999999999999765443333445678899999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||||+||+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.......
T Consensus       121 v~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl---~~~~~~kL~DfG~~~~~~~~~  196 (370)
T cd05596         121 VMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMDANG  196 (370)
T ss_pred             EEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---cCCCCEEEEeccceeeccCCC
Confidence            9999999999988765 468999999999999999999999999999999999999   677899999999997654332


Q ss_pred             --ceecccCCccccchhhhhc-----cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCH
Q 043828          240 --QFCEIVGSPYYMAPEVLRR-----NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       240 --~~~~~~gt~~y~aPE~l~~-----~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                        .....+||+.|+|||++..     .++.++|||||||++|+|++|.+||.+.+.......+.........+....++.
T Consensus       197 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  276 (370)
T cd05596         197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISK  276 (370)
T ss_pred             cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCH
Confidence              2234679999999999853     378899999999999999999999999888888888877654444444456899


Q ss_pred             HHHHHHHHccCCCCCC--CCCHHHHhcCCCccCC
Q 043828          313 EAKELVKNMLDPNPYN--RLTLEEVLENPWIKND  344 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~--Rps~~eil~hp~~~~~  344 (586)
                      ++++||.+||+.+|.+  |+|++++++||||++.
T Consensus       277 ~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~  310 (370)
T cd05596         277 QAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND  310 (370)
T ss_pred             HHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence            9999999999999988  9999999999999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-46  Score=388.23  Aligned_cols=259  Identities=28%  Similarity=0.508  Sum_probs=220.7

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++++.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++.+ +||||+++++++.+...+|+|
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv   79 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES-DSPWVVSLYYSFQDAQYLYLI   79 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCeeEEE
Confidence            4799999999999999999999999999999999765443334456788999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-  239 (586)
                      ||||+||+|.+++.....+++..++.++.|++.||.|||++||+||||||+|||+   +.++.+||+|||++....... 
T Consensus        80 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll---~~~~~~kl~DfGla~~~~~~~~  156 (377)
T cd05629          80 MEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILI---DRGGHIKLSDFGLSTGFHKQHD  156 (377)
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEEeecccccccccccc
Confidence            9999999999999888889999999999999999999999999999999999999   567899999999986321100 


Q ss_pred             -----------------------------------------------ceecccCCccccchhhhh-ccCCCcchHHHHHH
Q 043828          240 -----------------------------------------------QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGV  271 (586)
Q Consensus       240 -----------------------------------------------~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~  271 (586)
                                                                     .....+||+.|+|||++. ..++.++|||||||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv  236 (377)
T cd05629         157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGA  236 (377)
T ss_pred             cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecch
Confidence                                                           001246999999999986 46899999999999


Q ss_pred             HHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCC---CCHHHHhcCCCccCC
Q 043828          272 IIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNR---LTLEEVLENPWIKND  344 (586)
Q Consensus       272 il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R---ps~~eil~hp~~~~~  344 (586)
                      ++|+|++|.+||...+.......+.........+....++.++++||.+||. +|.+|   +|+.+++.||||+..
T Consensus       237 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~  311 (377)
T cd05629         237 IMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV  311 (377)
T ss_pred             hhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence            9999999999999888877777766543333333334688999999999997 67765   599999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=1.8e-46  Score=388.70  Aligned_cols=258  Identities=29%  Similarity=0.503  Sum_probs=223.1

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+|+++ +||||+++++.+.+++.+|+||
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCEEEEEE
Confidence            799999999999999999999999999999999765443333456788999999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC---
Q 043828          162 ELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG---  238 (586)
Q Consensus       162 E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~---  238 (586)
                      |||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +..+.+||+|||+|......   
T Consensus        81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill---~~~~~ikL~DFG~a~~~~~~~~~  157 (376)
T cd05598          81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDS  157 (376)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEE---CCCCCEEEEeCCCCccccccccc
Confidence            999999999999888889999999999999999999999999999999999999   56789999999997422100   


Q ss_pred             -----------------------------------------CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHH
Q 043828          239 -----------------------------------------EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYIL  276 (586)
Q Consensus       239 -----------------------------------------~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~l  276 (586)
                                                               ......+||+.|+|||++.+ .++.++|||||||++|+|
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel  237 (376)
T cd05598         158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM  237 (376)
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence                                                     00113579999999999864 689999999999999999


Q ss_pred             hhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCC---CHHHHhcCCCccCC
Q 043828          277 LCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRL---TLEEVLENPWIKND  344 (586)
Q Consensus       277 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rp---s~~eil~hp~~~~~  344 (586)
                      ++|..||.+.+..+....+.........+.+..+++.+.+||.+|+ .+|.+|+   |+.++++||||+..
T Consensus       238 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~  307 (376)
T cd05598         238 LVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI  307 (376)
T ss_pred             hhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence            9999999998887777666655444444445678999999999987 5999999   99999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-46  Score=373.16  Aligned_cols=248  Identities=28%  Similarity=0.423  Sum_probs=215.5

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcE-EEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC-eEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGET-YACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD-AIY  158 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~-~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~-~~~  158 (586)
                      ....+.+.||.|+||+||++.+  .|.. +|+|++......... .+.+.+|+.+|.+| +|||||++++++.... .++
T Consensus        41 ~~l~~~~~iG~G~~g~V~~~~~--~g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l-~HpNIV~f~G~~~~~~~~~~  116 (362)
T KOG0192|consen   41 DELPIEEVLGSGSFGTVYKGKW--RGTDVVAVKIISDPDFDDES-RKAFRREASLLSRL-RHPNIVQFYGACTSPPGSLC  116 (362)
T ss_pred             HHhhhhhhcccCCceeEEEEEe--CCceeEEEEEecchhcChHH-HHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCceE
Confidence            4566677799999999999976  5666 999999876654443 67899999999999 9999999999999887 799


Q ss_pred             EEEeccCCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcC-ceeccCCCCceEeecCCCCC-ceEEeecccccc
Q 043828          159 LVMELCEGGELFDRIVN--KGHYTERAAAAVGKTILRIVKVCHENG-VMHRDLKPENFLFADGSENS-QLKAIDFGLSIF  234 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivHrDlkp~Nill~~~~~~~-~vkl~Dfg~a~~  234 (586)
                      |||||+++|+|.+++..  +..++...+..++.+|+.||.|||+++ ||||||||+|||+   +... ++||+|||+++.
T Consensus       117 iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv---~~~~~~~KI~DFGlsr~  193 (362)
T KOG0192|consen  117 IVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILV---DLKGKTLKIADFGLSRE  193 (362)
T ss_pred             EEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEE---cCCCCEEEECCCcccee
Confidence            99999999999999987  678999999999999999999999999 9999999999999   5665 999999999987


Q ss_pred             cCCC-CceecccCCccccchhhhhc---cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          235 FKPG-EQFCEIVGSPYYMAPEVLRR---NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       235 ~~~~-~~~~~~~gt~~y~aPE~l~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      .... .......||+.|||||++.+   .|+.++||||||+++|||+||..||......+....+.......+.+  ..+
T Consensus       194 ~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p--~~~  271 (362)
T KOG0192|consen  194 KVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIP--KEC  271 (362)
T ss_pred             eccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC--ccC
Confidence            6544 33444789999999999984   49999999999999999999999999998877777766555544333  238


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ++.+..||.+||..||.+||++.+++.
T Consensus       272 ~~~l~~l~~~CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  272 PPHLSSLMERCWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             CHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence            899999999999999999999999885

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=6.3e-47  Score=359.37  Aligned_cols=253  Identities=30%  Similarity=0.482  Sum_probs=216.9

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC--C---
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK--D---  155 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~--~---  155 (586)
                      =.|.-.+.+|.|+||+||+|....+++.+|||++-.+...       -.+|+.+|+.+ +|||||++.-+|...  .   
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~-------knrEl~im~~l-~HpNIV~L~~~f~~~~~~d~~   95 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY-------KNRELQIMRKL-DHPNIVRLLYFFSSSTESDEV   95 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc-------CcHHHHHHHhc-CCcCeeeEEEEEEecCCCchh
Confidence            4688899999999999999999999999999998655322       24699999988 999999999888632  2   


Q ss_pred             eEEEEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          156 AIYLVMELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                      ...+||||++. +|.+.++.    +.+++.-.++-+.+||++||+|||+.||+||||||.|+|++  ...+.+||||||.
T Consensus        96 ~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD--~~tg~LKicDFGS  172 (364)
T KOG0658|consen   96 YLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVD--PDTGVLKICDFGS  172 (364)
T ss_pred             HHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEc--CCCCeEEeccCCc
Confidence            45699999976 89888874    57799999999999999999999999999999999999996  5679999999999


Q ss_pred             ccccCCCCceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc---------
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI---------  300 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~---------  300 (586)
                      |+....++...+...|..|+|||.+-  ..|+.+.||||.||++.||+-|++.|.+.+...++..|.+...         
T Consensus       173 AK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~  252 (364)
T KOG0658|consen  173 AKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKS  252 (364)
T ss_pred             ceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence            99998888878888899999999985  4799999999999999999999999999888777766654111         


Q ss_pred             -----------CCCCCCC-----CCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          301 -----------DFERDPW-----PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       301 -----------~~~~~~~-----~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                 .+...+|     ..+++++.+|+.++|..+|.+|.++.|++.||||...
T Consensus       253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdel  312 (364)
T KOG0658|consen  253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDEL  312 (364)
T ss_pred             cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHh
Confidence                       1111122     3578999999999999999999999999999999754

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=7.6e-46  Score=369.68  Aligned_cols=255  Identities=27%  Similarity=0.425  Sum_probs=213.4

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +++|++.+.||.|+||+||+|.+..++..||+|++.......  ....+.+|+.+++.+ +||||+++++++.+.+.+|+
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l   80 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG--APCTAIREVSLLKNL-KHANIVTLHDIIHTERCLTL   80 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCC--cchhHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEEE
Confidence            468999999999999999999999999999999987543221  234677899999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||+++ +|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++......
T Consensus        81 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~DfG~~~~~~~~  156 (288)
T cd07871          81 VFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLI---NEKGELKLADFGLARAKSVP  156 (288)
T ss_pred             EEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEECcCcceeeccCC
Confidence            9999975 8988887643 57899999999999999999999999999999999999   56789999999998764322


Q ss_pred             -CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCC-------------
Q 043828          239 -EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF-------------  302 (586)
Q Consensus       239 -~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-------------  302 (586)
                       .......|++.|+|||++.+  .++.++||||+||++|+|++|.+||.+.+..+....+.......             
T Consensus       157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T cd07871         157 TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEE  236 (288)
T ss_pred             CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchh
Confidence             22334578999999999853  58899999999999999999999998887766655544321111             


Q ss_pred             ------CC-------CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          303 ------ER-------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       303 ------~~-------~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                            +.       ...+.++.++++||.+||+.||.+|||++|+|+||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             hhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence                  00       0123567899999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=4.9e-46  Score=377.59  Aligned_cols=250  Identities=30%  Similarity=0.562  Sum_probs=220.8

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG  166 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~g  166 (586)
                      +.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++.+ +||||+++++++...+.+|+||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~Ey~~~   79 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT-RHPFLTSLKYSFQTKDRLCFVMEYVNG   79 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCEEEEEEeCCCC
Confidence            4699999999999999999999999999876544444456788899999999 899999999999999999999999999


Q ss_pred             CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC-CCceeccc
Q 043828          167 GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP-GEQFCEIV  245 (586)
Q Consensus       167 g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~  245 (586)
                      |+|..++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++..... .......+
T Consensus        80 g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll---~~~~~~kL~DfG~~~~~~~~~~~~~~~~  156 (328)
T cd05593          80 GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLML---DKDGHIKITDFGLCKEGITDAATMKTFC  156 (328)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEE---CCCCcEEEecCcCCccCCCccccccccc
Confidence            9999999888889999999999999999999999999999999999999   5678999999999875422 22334567


Q ss_pred             CCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCC
Q 043828          246 GSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDP  324 (586)
Q Consensus       246 gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  324 (586)
                      ||+.|+|||++. ..++.++|||||||++|+|++|..||...+.......+......++    ..++.++.+||.+||.+
T Consensus       157 gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~  232 (328)
T cd05593         157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP----RTLSADAKSLLSGLLIK  232 (328)
T ss_pred             CCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCC----CCCCHHHHHHHHHHcCC
Confidence            999999999986 4689999999999999999999999998888877777776665544    35789999999999999


Q ss_pred             CCCCCC-----CHHHHhcCCCccCC
Q 043828          325 NPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       325 dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      ||.+||     ++.++++||||...
T Consensus       233 dP~~R~~~~~~~~~~il~h~~~~~~  257 (328)
T cd05593         233 DPNKRLGGGPDDAKEIMRHSFFTGV  257 (328)
T ss_pred             CHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            999997     89999999999764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=5.7e-46  Score=375.95  Aligned_cols=251  Identities=30%  Similarity=0.556  Sum_probs=221.1

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG  166 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~g  166 (586)
                      +.||+|+||+||+|++..+++.||+|++.+...........+..|+.++..+.+||||+++++++...+.+|+||||++|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999999999999999998765433444567778999998876899999999999999999999999999


Q ss_pred             CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC-CCCceeccc
Q 043828          167 GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIV  245 (586)
Q Consensus       167 g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~~~~~~~~  245 (586)
                      |+|..++.....+++..+..++.|++.||.|||++||+||||||+|||+   +.++.+||+|||++.... .........
T Consensus        81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli---~~~~~~kL~DfG~~~~~~~~~~~~~~~~  157 (320)
T cd05590          81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGIFNGKTTSTFC  157 (320)
T ss_pred             chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeeCCCCeecCcCCCcccccc
Confidence            9999999888889999999999999999999999999999999999999   567899999999987542 222334567


Q ss_pred             CCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCC
Q 043828          246 GSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDP  324 (586)
Q Consensus       246 gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  324 (586)
                      ||+.|+|||++. ..++.++|||||||++|+|++|..||...+...+...+......++    ..++.++.+||.+||+.
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~L~~  233 (320)
T cd05590         158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP----TWLSQDAVDILKAFMTK  233 (320)
T ss_pred             cCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHccc
Confidence            999999999986 4688999999999999999999999999998888888887765543    24789999999999999


Q ss_pred             CCCCCCCH------HHHhcCCCccCC
Q 043828          325 NPYNRLTL------EEVLENPWIKND  344 (586)
Q Consensus       325 dp~~Rps~------~eil~hp~~~~~  344 (586)
                      ||.+||++      ++++.||||+..
T Consensus       234 dP~~R~~~~~~~~~~~~~~h~~f~~~  259 (320)
T cd05590         234 NPTMRLGSLTLGGEEAILRHPFFKEL  259 (320)
T ss_pred             CHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence            99999998      999999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=6.7e-46  Score=381.99  Aligned_cols=261  Identities=31%  Similarity=0.500  Sum_probs=224.1

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++.+.||+|+||.||+|.+..+++.+|+|++.+...........+.+|+.+++.+ +||||+++++++.++..+|
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~  119 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFCAFQDDKYLY  119 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEE
Confidence            346899999999999999999999999999999999765443333445678899999998 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      +|||||+||+|.+++... .+++..+..++.||+.||.|||++||+||||||+|||+   +..+.+||+|||+|......
T Consensus       120 lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl---~~~~~~kL~DFG~a~~~~~~  195 (370)
T cd05621         120 MVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDET  195 (370)
T ss_pred             EEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEEecccceecccC
Confidence            999999999999988654 68999999999999999999999999999999999999   56789999999999876433


Q ss_pred             Cc--eecccCCccccchhhhhc-----cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCC
Q 043828          239 EQ--FCEIVGSPYYMAPEVLRR-----NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS  311 (586)
Q Consensus       239 ~~--~~~~~gt~~y~aPE~l~~-----~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  311 (586)
                      ..  ....+||+.|+|||++.+     .++.++||||+||++|+|++|..||...+.......+......+..+....++
T Consensus       196 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s  275 (370)
T cd05621         196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEIS  275 (370)
T ss_pred             CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCC
Confidence            22  235679999999999863     27889999999999999999999999988888888877655444333334679


Q ss_pred             HHHHHHHHHccCCCCCC--CCCHHHHhcCCCccCC
Q 043828          312 KEAKELVKNMLDPNPYN--RLTLEEVLENPWIKND  344 (586)
Q Consensus       312 ~~~~~li~~~L~~dp~~--Rps~~eil~hp~~~~~  344 (586)
                      ..++++|.+||..+|.+  |+|+.++++||||+..
T Consensus       276 ~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         276 KHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             HHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence            99999999999865544  8999999999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.8e-46  Score=383.82  Aligned_cols=259  Identities=35%  Similarity=0.602  Sum_probs=226.9

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|+||+||+|++..+|+.||+|++.+...........+.+|+.++..+ +||||+++++++.+++.+|+|
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv   79 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADA-DSPWIVKLYYSFQDEEHLYLV   79 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc-CCCCccchhhheecCCeEEEE
Confidence            4799999999999999999999999999999999876544434456788999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-  239 (586)
                      |||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++....... 
T Consensus        80 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~  156 (350)
T cd05573          80 MEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILI---DADGHIKLADFGLCKKMNKAKD  156 (350)
T ss_pred             EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEeecCCCCccCcccCc
Confidence            9999999999999888889999999999999999999999999999999999999   677899999999987654332 


Q ss_pred             -----------------------------ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHH
Q 043828          240 -----------------------------QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEE  289 (586)
Q Consensus       240 -----------------------------~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  289 (586)
                                                   ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...+..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~  236 (350)
T cd05573         157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ  236 (350)
T ss_pred             ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence                                         2234579999999999864 6899999999999999999999999998887


Q ss_pred             HHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCC-HHHHhcCCCccCC
Q 043828          290 GIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLT-LEEVLENPWIKND  344 (586)
Q Consensus       290 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps-~~eil~hp~~~~~  344 (586)
                      .....+......+..+....+++.+.+||.+||. ||.+||+ ++++++||||+..
T Consensus       237 ~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~  291 (350)
T cd05573         237 ETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI  291 (350)
T ss_pred             HHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence            7777777633333333334589999999999997 9999999 9999999999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=6e-46  Score=376.27  Aligned_cols=250  Identities=32%  Similarity=0.578  Sum_probs=221.0

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG  166 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~g  166 (586)
                      +.||+|+||.||+|.+..+|..||+|++.+...........+.+|+.+++.+ +||||+++++++...+.+|+||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~E~~~~   79 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVMEYANG   79 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCEEEEEEeCCCC
Confidence            4699999999999999999999999999876544444456778899999999 899999999999999999999999999


Q ss_pred             CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC-CCceeccc
Q 043828          167 GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP-GEQFCEIV  245 (586)
Q Consensus       167 g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~  245 (586)
                      |+|..++.....+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++..... ........
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  156 (323)
T cd05595          80 GELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFC  156 (323)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---cCCCCEEecccHHhccccCCCCcccccc
Confidence            9999999888889999999999999999999999999999999999999   5678999999999875322 22334567


Q ss_pred             CCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCC
Q 043828          246 GSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDP  324 (586)
Q Consensus       246 gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  324 (586)
                      ||+.|+|||++. +.++.++|||||||++|+|++|..||...+.......+......++    ..+++.+.+||.+||..
T Consensus       157 gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~  232 (323)
T cd05595         157 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKK  232 (323)
T ss_pred             CCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHccC
Confidence            999999999986 4689999999999999999999999999888888887777666554    35789999999999999


Q ss_pred             CCCCCC-----CHHHHhcCCCccCC
Q 043828          325 NPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       325 dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      ||.+||     ++.++++||||...
T Consensus       233 dP~~R~~~~~~~~~~~l~h~~~~~~  257 (323)
T cd05595         233 DPKQRLGGGPSDAKEVMEHRFFLSI  257 (323)
T ss_pred             CHHHhCCCCCCCHHHHHcCCCcCCC
Confidence            999998     99999999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=1.3e-45  Score=374.20  Aligned_cols=256  Identities=28%  Similarity=0.507  Sum_probs=224.8

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|++.+.||+|+||.||+|.+..+++.||+|++.+.........+.+..|+.++..+..|++|+++++++...+.+|+||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            58999999999999999999999999999999987654444445678889999999955567899999999999999999


Q ss_pred             eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC-CCCc
Q 043828          162 ELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQ  240 (586)
Q Consensus       162 E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~~~  240 (586)
                      ||++||+|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.... ....
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~~~  157 (324)
T cd05587          81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DAEGHIKIADFGMCKENIFGGKT  157 (324)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---cCCCCEEEeecCcceecCCCCCc
Confidence            999999999999888889999999999999999999999999999999999999   567899999999987532 2233


Q ss_pred             eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHH
Q 043828          241 FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK  319 (586)
Q Consensus       241 ~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  319 (586)
                      ....+||+.|+|||++.+ .++.++||||+||++|+|++|..||.+.+.......+......++    ..+++.+.++|.
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~  233 (324)
T cd05587         158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP----KSLSKEAVSICK  233 (324)
T ss_pred             eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHH
Confidence            345679999999999864 688999999999999999999999999988888888877665544    357899999999


Q ss_pred             HccCCCCCCCCCH-----HHHhcCCCccCC
Q 043828          320 NMLDPNPYNRLTL-----EEVLENPWIKND  344 (586)
Q Consensus       320 ~~L~~dp~~Rps~-----~eil~hp~~~~~  344 (586)
                      +||.+||.+|+++     +++++||||+..
T Consensus       234 ~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~  263 (324)
T cd05587         234 GLLTKHPAKRLGCGPTGERDIREHAFFRRI  263 (324)
T ss_pred             HHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            9999999999976     899999999864

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=7.8e-46  Score=381.43  Aligned_cols=259  Identities=30%  Similarity=0.514  Sum_probs=222.9

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.++..+ +||||+++++.+.+.+.+|+|
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~~~~~lv   79 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA-DGAWVVKMFYSFQDKRNLYLI   79 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEE
Confidence            4689999999999999999999999999999999865443344456788999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-  239 (586)
                      ||||+||+|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||+   +..+.+||+|||++....... 
T Consensus        80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli---~~~~~vkL~DfG~~~~~~~~~~  156 (360)
T cd05627          80 MEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLL---DAKGHVKLSDFGLCTGLKKAHR  156 (360)
T ss_pred             EeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE---CCCCCEEEeeccCCcccccccc
Confidence            9999999999999888889999999999999999999999999999999999999   567899999999986442110 


Q ss_pred             -----------------------------------ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCC
Q 043828          240 -----------------------------------QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPF  283 (586)
Q Consensus       240 -----------------------------------~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf  283 (586)
                                                         .....+||+.|+|||++. ..++.++|||||||++|+|++|.+||
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf  236 (360)
T cd05627         157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF  236 (360)
T ss_pred             cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCC
Confidence                                               012357999999999986 46899999999999999999999999


Q ss_pred             CCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCC---CHHHHhcCCCccCC
Q 043828          284 WAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRL---TLEEVLENPWIKND  344 (586)
Q Consensus       284 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rp---s~~eil~hp~~~~~  344 (586)
                      .+.+.......+.........++...++..+++||.+|+. ||.+|+   ++.++++||||++.
T Consensus       237 ~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~  299 (360)
T cd05627         237 CSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGV  299 (360)
T ss_pred             CCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCC
Confidence            9988888877777543333222333578999999999874 999998   58999999999874

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=5.5e-45  Score=374.08  Aligned_cols=257  Identities=26%  Similarity=0.409  Sum_probs=209.5

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ....+|++++.||+|+||.||+|++..+|+.||+|++....  .......+.+|+.+++.+ +||||+++++++...+.+
T Consensus        71 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~  147 (353)
T PLN00034         71 KSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDV-NHPNVVKCHDMFDHNGEI  147 (353)
T ss_pred             CCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhC-CCCCcceeeeEeccCCeE
Confidence            44578999999999999999999999999999999986543  223346788999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |+||||+++++|...    ....+..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.....
T Consensus       148 ~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~~~~kL~DfG~~~~~~~  220 (353)
T PLN00034        148 QVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLI---NSAKNVKIADFGVSRILAQ  220 (353)
T ss_pred             EEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE---cCCCCEEEcccccceeccc
Confidence            999999999998643    345788888999999999999999999999999999999   5678999999999986543


Q ss_pred             CC-ceecccCCccccchhhhhc------cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          238 GE-QFCEIVGSPYYMAPEVLRR------NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       238 ~~-~~~~~~gt~~y~aPE~l~~------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      .. ......||..|+|||++..      .++.++|||||||++|+|++|..||...........+..............+
T Consensus       221 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (353)
T PLN00034        221 TMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATA  300 (353)
T ss_pred             ccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCcc
Confidence            22 2334679999999998742      2356899999999999999999999743322222211111111122223467


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +.++++||.+||..||++|||+.|+|+||||...
T Consensus       301 ~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~  334 (353)
T PLN00034        301 SREFRHFISCCLQREPAKRWSAMQLLQHPFILRA  334 (353)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence            8999999999999999999999999999999865

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=6.1e-46  Score=377.88  Aligned_cols=259  Identities=31%  Similarity=0.476  Sum_probs=224.7

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|.+.+.||+|+||+||+|++..+|+.||+|++.+...........+.+|+.+++.+ +||||+++++++.+.+.+|+|
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~~~~i~~~~~~~~~~~~~~lv   79 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS-NSPWIPQLQYAFQDKDNLYLV   79 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCeEEEE
Confidence            3799999999999999999999999999999999876543344456788999999988 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||+++|+|.+++... ..+++..+..++.||+.||.|||+.+|+||||||+|||+   +..+.+||+|||++.......
T Consensus        80 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll---~~~~~~kL~Dfg~a~~~~~~~  156 (330)
T cd05601          80 MEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLI---DRTGHIKLADFGSAARLTANK  156 (330)
T ss_pred             ECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEE---CCCCCEEeccCCCCeECCCCC
Confidence            9999999999999875 679999999999999999999999999999999999999   677899999999998765433


Q ss_pred             ce--ecccCCccccchhhhh-------ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          240 QF--CEIVGSPYYMAPEVLR-------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       240 ~~--~~~~gt~~y~aPE~l~-------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      ..  ....||+.|+|||++.       ..++.++|||||||++|+|++|..||...+.......+.........+..+.+
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  236 (330)
T cd05601         157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKV  236 (330)
T ss_pred             ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCC
Confidence            22  2347999999999985       24778999999999999999999999988887777777665433323333568


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +..+.+||.+||. +|.+|||+.+++.||||...
T Consensus       237 ~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~  269 (330)
T cd05601         237 SSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI  269 (330)
T ss_pred             CHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence            9999999999998 99999999999999999864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=1.6e-45  Score=373.15  Aligned_cols=251  Identities=30%  Similarity=0.537  Sum_probs=221.5

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG  166 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~g  166 (586)
                      +.||+|+||.||+|++..+++.||+|++.+...........+..|+.++..+.+||||+++++++.+.+.+|+||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            46999999999999999999999999998765444444566778999998777899999999999999999999999999


Q ss_pred             CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC-CCceeccc
Q 043828          167 GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP-GEQFCEIV  245 (586)
Q Consensus       167 g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~  245 (586)
                      |+|..++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++..... ........
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  157 (321)
T cd05591          81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL---DAEGHCKLADFGMCKEGILNGVTTTTFC  157 (321)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeecccceecccCCccccccc
Confidence            9999999888889999999999999999999999999999999999999   5678999999999875432 22334567


Q ss_pred             CCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCC
Q 043828          246 GSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDP  324 (586)
Q Consensus       246 gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  324 (586)
                      ||+.|+|||++.+ .++.++|||||||++|+|++|..||...+.......+......++.    .++.++.+||.+||..
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~----~~~~~~~~ll~~~L~~  233 (321)
T cd05591         158 GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPV----WLSKEAVSILKAFMTK  233 (321)
T ss_pred             cCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHHhcc
Confidence            9999999999864 6899999999999999999999999999988888888877655442    4789999999999999


Q ss_pred             CCCCCC-------CHHHHhcCCCccCC
Q 043828          325 NPYNRL-------TLEEVLENPWIKND  344 (586)
Q Consensus       325 dp~~Rp-------s~~eil~hp~~~~~  344 (586)
                      ||.+||       ++.++++||||...
T Consensus       234 dp~~R~~~~~~~~~~~~~~~hp~~~~~  260 (321)
T cd05591         234 NPNKRLGCVASQGGEDAIKQHPFFKEI  260 (321)
T ss_pred             CHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence            999999       99999999999753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=1.8e-45  Score=373.84  Aligned_cols=251  Identities=28%  Similarity=0.531  Sum_probs=215.4

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG  166 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~g  166 (586)
                      +.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.++..+.+||||+++++++.+.+.+|+|||||+|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            46999999999999999999999999998765544445567889999999997899999999999999999999999999


Q ss_pred             CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc-CCCCceeccc
Q 043828          167 GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-KPGEQFCEIV  245 (586)
Q Consensus       167 g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~-~~~~~~~~~~  245 (586)
                      |+|..++...+.+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++... .........+
T Consensus        81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  157 (329)
T cd05588          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGIRPGDTTSTFC  157 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEECcCccccccccCCCcccccc
Confidence            9999999888889999999999999999999999999999999999999   56789999999998753 2233344568


Q ss_pred             CCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCC---------CHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          246 GSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAE---------TEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       246 gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~---------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      ||+.|+|||++.+ .++.++|||||||++|+|++|..||...         ........+......++    ..++..+.
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~  233 (329)
T cd05588         158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAS  233 (329)
T ss_pred             CCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC----CCCCHHHH
Confidence            9999999999864 6889999999999999999999999531         12233444555544433    35789999


Q ss_pred             HHHHHccCCCCCCCCC------HHHHhcCCCccCC
Q 043828          316 ELVKNMLDPNPYNRLT------LEEVLENPWIKND  344 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps------~~eil~hp~~~~~  344 (586)
                      +||.+||+.||.+|||      +.++++||||...
T Consensus       234 ~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~  268 (329)
T cd05588         234 SVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNI  268 (329)
T ss_pred             HHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence            9999999999999997      7899999999753

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=2.4e-45  Score=372.20  Aligned_cols=256  Identities=27%  Similarity=0.490  Sum_probs=226.1

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|.+.+.||+|+||.||+|++..+++.||+|++.+...........+..|..++..+..||+|+++++++...+.+|+||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            58899999999999999999999999999999987654444445567778888888877999999999999999999999


Q ss_pred             eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC-CCc
Q 043828          162 ELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP-GEQ  240 (586)
Q Consensus       162 E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~  240 (586)
                      ||+++|+|..++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++..... ...
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kL~DfG~~~~~~~~~~~  157 (323)
T cd05616          81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENMWDGVT  157 (323)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEE---CCCCcEEEccCCCceecCCCCCc
Confidence            999999999999888889999999999999999999999999999999999999   6678999999999875432 223


Q ss_pred             eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHH
Q 043828          241 FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK  319 (586)
Q Consensus       241 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  319 (586)
                      ....+||+.|+|||++. ..++.++|||||||++|+|++|..||...+...+...+......++.    .++.++.+||.
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~li~  233 (323)
T cd05616         158 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICK  233 (323)
T ss_pred             cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC----cCCHHHHHHHH
Confidence            34567999999999986 46899999999999999999999999999888888888877665543    57899999999


Q ss_pred             HccCCCCCCCCC-----HHHHhcCCCccCC
Q 043828          320 NMLDPNPYNRLT-----LEEVLENPWIKND  344 (586)
Q Consensus       320 ~~L~~dp~~Rps-----~~eil~hp~~~~~  344 (586)
                      +||+.||.+|++     ..++++||||+..
T Consensus       234 ~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~  263 (323)
T cd05616         234 GLMTKHPGKRLGCGPEGERDIKEHAFFRYI  263 (323)
T ss_pred             HHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence            999999999997     4899999999864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=3.1e-45  Score=377.49  Aligned_cols=260  Identities=32%  Similarity=0.499  Sum_probs=223.7

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.+.||+|+||.||+|.+..+++.+|+|++.+...........+.+|+.+++.+ +||||+++++++.++..+|+
T Consensus        42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~l  120 (371)
T cd05622          42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYM  120 (371)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEE
Confidence            47999999999999999999999999999999999765443333445678899999998 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||||+||+|.+++... .+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.......
T Consensus       121 v~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll---~~~~~ikL~DfG~a~~~~~~~  196 (371)
T cd05622         121 VMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEG  196 (371)
T ss_pred             EEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE---CCCCCEEEEeCCceeEcCcCC
Confidence            99999999999988654 58999999999999999999999999999999999999   567899999999998764322


Q ss_pred             --ceecccCCccccchhhhhc-----cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCH
Q 043828          240 --QFCEIVGSPYYMAPEVLRR-----NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       240 --~~~~~~gt~~y~aPE~l~~-----~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                        .....+||+.|+|||++..     .++.++|||||||++|+|++|..||...+.......+......+..+....++.
T Consensus       197 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  276 (371)
T cd05622         197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISK  276 (371)
T ss_pred             cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCH
Confidence              2235679999999999863     278899999999999999999999999988888888877654444444457899


Q ss_pred             HHHHHHHHccCCCCCC--CCCHHHHhcCCCccCC
Q 043828          313 EAKELVKNMLDPNPYN--RLTLEEVLENPWIKND  344 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~--Rps~~eil~hp~~~~~  344 (586)
                      .+++||.+||..++.+  |++++++++||||++.
T Consensus       277 ~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~  310 (371)
T cd05622         277 EAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  310 (371)
T ss_pred             HHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence            9999999999854443  7899999999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=3.2e-45  Score=369.80  Aligned_cols=251  Identities=26%  Similarity=0.489  Sum_probs=217.7

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG  166 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~g  166 (586)
                      +.||+|+||.||+|.+..+|+.||+|++.+..............|+.++..+.+||||+++++++.+.+.+|+||||++|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            46999999999999999999999999998754332334456777888888766899999999999999999999999999


Q ss_pred             CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC-CCceeccc
Q 043828          167 GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP-GEQFCEIV  245 (586)
Q Consensus       167 g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~  245 (586)
                      |+|..++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++..... .......+
T Consensus        81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (316)
T cd05620          81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVML---DRDGHIKIADFGMCKENVFGDNRASTFC  157 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEeCccCCCeecccCCCceeccC
Confidence            9999999888889999999999999999999999999999999999999   5678999999999875322 22334567


Q ss_pred             CCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCC
Q 043828          246 GSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDP  324 (586)
Q Consensus       246 gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  324 (586)
                      ||+.|+|||++. ..++.++|||||||++|+|++|..||...+.......+......++.    .++.++++||.+||..
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~  233 (316)
T cd05620         158 GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPR----WITKESKDILEKLFER  233 (316)
T ss_pred             CCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC----CCCHHHHHHHHHHccC
Confidence            999999999986 46899999999999999999999999998888887777665544332    4789999999999999


Q ss_pred             CCCCCCCH-HHHhcCCCccCC
Q 043828          325 NPYNRLTL-EEVLENPWIKND  344 (586)
Q Consensus       325 dp~~Rps~-~eil~hp~~~~~  344 (586)
                      ||.+||++ +++++||||+..
T Consensus       234 dP~~R~~~~~~~~~h~~f~~~  254 (316)
T cd05620         234 DPTRRLGVVGNIRGHPFFKTI  254 (316)
T ss_pred             CHHHcCCChHHHHcCCCcCCC
Confidence            99999998 589999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=3e-45  Score=365.42  Aligned_cols=256  Identities=31%  Similarity=0.469  Sum_probs=212.8

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|+||.||+|++..+++.||+|++...... ....+.+.+|+.+++.+ +||||+++++++..++.+|+|
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv   78 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN-EEVKETTLRELKMLRTL-KQENIVELKEAFRRRGKLYLV   78 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhhHHHHHHHHHhC-CCccccchhhhEecCCEEEEE
Confidence            3799999999999999999999999999999999765332 23346788899999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-  239 (586)
                      |||++++.+..+......+++..+..++.|++.||.|||+.+|+||||||+||++   +.++.+||+|||++....... 
T Consensus        79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~  155 (287)
T cd07848          79 FEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLI---SHNDVLKLCDFGFARNLSEGSN  155 (287)
T ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccCccccccccc
Confidence            9999987776555455679999999999999999999999999999999999999   567899999999998764322 


Q ss_pred             -ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccC----------------
Q 043828          240 -QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID----------------  301 (586)
Q Consensus       240 -~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~----------------  301 (586)
                       ......|++.|+|||++. ..++.++|||||||++|+|++|.+||.+.+.......+......                
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (287)
T cd07848         156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFH  235 (287)
T ss_pred             ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhc
Confidence             223457899999999986 46889999999999999999999999887665444333221100                


Q ss_pred             ---CCCC---------CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          302 ---FERD---------PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       302 ---~~~~---------~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                         ++..         .+..++..+.+||.+||++||++|||++++|+||||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         236 GLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             ccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence               0000         012367889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=1.2e-45  Score=374.68  Aligned_cols=250  Identities=32%  Similarity=0.579  Sum_probs=220.3

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG  166 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~g  166 (586)
                      +.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++.+ +||||+++++++...+.+|+||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~-~hp~i~~~~~~~~~~~~~~lv~E~~~~   79 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYANG   79 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            4699999999999999999999999999876544444456778899999999 899999999999999999999999999


Q ss_pred             CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeecCCCCCceEEeecccccccC-CCCceecc
Q 043828          167 GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEI  244 (586)
Q Consensus       167 g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~~~~~~~  244 (586)
                      |+|..++.....+++..+..++.||+.||.|||+ +||+||||||+|||+   +.++.+||+|||++.... ........
T Consensus        80 ~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~  156 (325)
T cd05594          80 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTF  156 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEE---CCCCCEEEecCCCCeecCCCCcccccc
Confidence            9999999888889999999999999999999997 799999999999999   567899999999987532 22333456


Q ss_pred             cCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccC
Q 043828          245 VGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD  323 (586)
Q Consensus       245 ~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~  323 (586)
                      .||+.|+|||++. ..++.++|||||||++|+|++|..||...+.......+......++.    .+++.+.+||.+||+
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~----~~~~~~~~li~~~L~  232 (325)
T cd05594         157 CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLSPEAKSLLSGLLK  232 (325)
T ss_pred             cCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCC----CCCHHHHHHHHHHhh
Confidence            7999999999986 46899999999999999999999999998888887777776665543    578999999999999


Q ss_pred             CCCCCCC-----CHHHHhcCCCccCC
Q 043828          324 PNPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       324 ~dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      .||.+|+     ++.++++||||.+.
T Consensus       233 ~dP~~R~~~~~~~~~~il~h~~~~~~  258 (325)
T cd05594         233 KDPKQRLGGGPDDAKEIMQHKFFAGI  258 (325)
T ss_pred             cCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence            9999997     99999999999863

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-46  Score=348.79  Aligned_cols=260  Identities=31%  Similarity=0.599  Sum_probs=241.3

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ..+++|..++.||+|.||.|-+|+.+.+|+.||+|+++++.+........-..|-.+|+.. +||.+..+-..|+..+.+
T Consensus       165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~-~HPFLt~LKYsFQt~drl  243 (516)
T KOG0690|consen  165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNC-RHPFLTSLKYSFQTQDRL  243 (516)
T ss_pred             eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhc-cCcHHHHhhhhhccCceE
Confidence            3578999999999999999999999999999999999998877666666777899999998 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc-cC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF-FK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~-~~  236 (586)
                      |+||||+.||.|+-.+.+...+++..++.+...|+.||.|||+++||+||||.+|.|+   +.+|++||.|||+++. +.
T Consensus       244 CFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL---DkDGHIKitDFGLCKE~I~  320 (516)
T KOG0690|consen  244 CFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL---DKDGHIKITDFGLCKEEIK  320 (516)
T ss_pred             EEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee---ccCCceEeeecccchhccc
Confidence            9999999999999999888899999999999999999999999999999999999999   7899999999999975 34


Q ss_pred             CCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          237 PGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      .+....+.||||.|+|||++. ..|+.++|+|.+||++|||++|+.||+..+...+...|..+.+.||.    .++++++
T Consensus       321 ~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr----~ls~eAk  396 (516)
T KOG0690|consen  321 YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR----TLSPEAK  396 (516)
T ss_pred             ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc----cCCHHHH
Confidence            456677899999999999997 47999999999999999999999999999999999999999999986    5899999


Q ss_pred             HHHHHccCCCCCCCC-----CHHHHhcCCCccCCC
Q 043828          316 ELVKNMLDPNPYNRL-----TLEEVLENPWIKNDN  345 (586)
Q Consensus       316 ~li~~~L~~dp~~Rp-----s~~eil~hp~~~~~~  345 (586)
                      .|+..+|.+||.+|.     .+.||.+|+||....
T Consensus       397 tLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~  431 (516)
T KOG0690|consen  397 TLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVD  431 (516)
T ss_pred             HHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCC
Confidence            999999999999998     789999999998754

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=3.3e-45  Score=370.17  Aligned_cols=251  Identities=31%  Similarity=0.557  Sum_probs=221.3

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG  166 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~g  166 (586)
                      +.||+|+||+||+|.+..+++.||+|++.+...........+.+|+.+++.+.+||||++++++++..+.+|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999999999999999998765444445567788999999887899999999999999999999999999


Q ss_pred             CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC-CCceeccc
Q 043828          167 GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP-GEQFCEIV  245 (586)
Q Consensus       167 g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~  245 (586)
                      |+|..++.....+++..+..++.||+.||.|||+++|+||||||+||++   +.++.+||+|||++..... .......+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (318)
T cd05570          81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL---DSEGHIKIADFGMCKEGILGGVTTSTFC  157 (318)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEE---CCCCcEEecccCCCeecCcCCCccccee
Confidence            9999999888889999999999999999999999999999999999999   5678999999999875322 22233457


Q ss_pred             CCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCC
Q 043828          246 GSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDP  324 (586)
Q Consensus       246 gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  324 (586)
                      ||+.|+|||++. ..++.++|||||||++|+|++|..||...+.......+......++    ..++..+.+||.+||..
T Consensus       158 g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~~  233 (318)
T cd05570         158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYP----RWLSKEAKSILKSFLTK  233 (318)
T ss_pred             cCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----CcCCHHHHHHHHHHccC
Confidence            999999999986 4689999999999999999999999998888888887777665543    35789999999999999


Q ss_pred             CCCCCCCH-----HHHhcCCCccCC
Q 043828          325 NPYNRLTL-----EEVLENPWIKND  344 (586)
Q Consensus       325 dp~~Rps~-----~eil~hp~~~~~  344 (586)
                      ||.+|||+     .++++||||+..
T Consensus       234 dP~~R~s~~~~~~~~ll~~~~~~~~  258 (318)
T cd05570         234 NPEKRLGCLPTGEQDIKGHPFFREI  258 (318)
T ss_pred             CHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            99999999     999999999864

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=3.7e-46  Score=370.57  Aligned_cols=257  Identities=34%  Similarity=0.554  Sum_probs=233.5

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe-EE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA-IY  158 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~-~~  158 (586)
                      +++|..++++|+|+||.+++++++..+..||+|.|........ .......|+.+++++ .|||||.+.+.|..++. ++
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~-~r~~A~~E~~lis~~-~hP~iv~y~ds~~~~~~~l~   80 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEP-ERRSAIQEMDLLSKL-LHPNIVEYKDSFEEDGQLLC   80 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCch-hhHHHHHHHHHHHhc-cCCCeeeeccchhcCCceEE
Confidence            5789999999999999999999999999999999987765543 334788899999998 99999999999999888 99


Q ss_pred             EEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          159 LVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      |||+||+||+|.+.+...  ..++++.+..|+.||+.|+.|||+++|+|||||+.||++   .....|||+|||+|+.+.
T Consensus        81 Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifl---tk~~~VkLgDfGlaK~l~  157 (426)
T KOG0589|consen   81 IVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFL---TKDKKVKLGDFGLAKILN  157 (426)
T ss_pred             EEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhc---cccCceeecchhhhhhcC
Confidence            999999999999999764  358999999999999999999999999999999999999   667788999999999988


Q ss_pred             CCC-ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          237 PGE-QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       237 ~~~-~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      +.. ...+.+|||.||+||++.+ +|+.++|||||||++|||++-+++|.+.+...+..+|.++.+..-.   ..++.++
T Consensus       158 ~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp---~~ys~el  234 (426)
T KOG0589|consen  158 PEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLP---SMYSSEL  234 (426)
T ss_pred             CchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCC---ccccHHH
Confidence            776 5667899999999999985 7999999999999999999999999999999999999998843322   4689999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +.||..||..+|..||++.++|.+|.+...
T Consensus       235 ~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~  264 (426)
T KOG0589|consen  235 RSLVKSMLRKNPEHRPSALELLRRPHLLRY  264 (426)
T ss_pred             HHHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence            999999999999999999999999998754

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=5.4e-45  Score=366.37  Aligned_cols=258  Identities=25%  Similarity=0.377  Sum_probs=208.6

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.+.||+|+||.||+|.+..+|+.||+|++.......  ....+.+|+.+++.+ +||||+++++++.+...+|+
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l   80 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG--TPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTL   80 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccc--cchhHHHHHHHHhhC-CCCCcCeEEEEEecCCeEEE
Confidence            368999999999999999999999999999999987543222  224567899999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC-
Q 043828          160 VMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP-  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~-  237 (586)
                      ||||+. ++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||+   +..+.+||+|||++..... 
T Consensus        81 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~  156 (303)
T cd07869          81 VFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLI---SDTGELKLADFGLARAKSVP  156 (303)
T ss_pred             EEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECCCCcceeccCC
Confidence            999995 577777765 3568999999999999999999999999999999999999   5678899999999875432 


Q ss_pred             CCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHhCccCCC-----------
Q 043828          238 GEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAIIRGKIDFE-----------  303 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~~~~~-----------  303 (586)
                      ........||+.|+|||++.+  .++.++||||+||++|+|++|..||.+... ......+........           
T Consensus       157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (303)
T cd07869         157 SHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP  236 (303)
T ss_pred             CccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcc
Confidence            222344678999999999853  578899999999999999999999987533 222222221100000           


Q ss_pred             ---CCC------------C--CCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          304 ---RDP------------W--PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       304 ---~~~------------~--~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                         ...            |  ..++..+++||.+||+.||.+|||+.|+|+||||+..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~  294 (303)
T cd07869         237 HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDL  294 (303)
T ss_pred             ccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccC
Confidence               000            0  1245689999999999999999999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=5.8e-45  Score=367.90  Aligned_cols=251  Identities=28%  Similarity=0.524  Sum_probs=217.1

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG  166 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~g  166 (586)
                      +.||+|+||+||+|.+..+++.||+|++.+.........+....|..++..+.+||||+++++++.....+|+||||++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            46999999999999999999999999998765433334456667888887666899999999999999999999999999


Q ss_pred             CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC-Cceeccc
Q 043828          167 GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-EQFCEIV  245 (586)
Q Consensus       167 g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~  245 (586)
                      |+|..++.....+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||++...... ......+
T Consensus        81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill---~~~~~~kL~Dfg~a~~~~~~~~~~~~~~  157 (316)
T cd05592          81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL---DKDGHIKIADFGMCKENMNGEGKASTFC  157 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEE---CCCCCEEEccCcCCeECCCCCCcccccc
Confidence            9999999888889999999999999999999999999999999999999   56789999999999764322 2334567


Q ss_pred             CCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCC
Q 043828          246 GSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDP  324 (586)
Q Consensus       246 gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  324 (586)
                      ||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+...+...+......++    ..++.++.+||.+||..
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~ll~~~l~~  233 (316)
T cd05592         158 GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFP----RWISKEAKDCLSKLFER  233 (316)
T ss_pred             CCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHccC
Confidence            9999999999864 689999999999999999999999999888888877766544333    35789999999999999


Q ss_pred             CCCCCCCH-HHHhcCCCccCC
Q 043828          325 NPYNRLTL-EEVLENPWIKND  344 (586)
Q Consensus       325 dp~~Rps~-~eil~hp~~~~~  344 (586)
                      ||.+||++ .++++||||+..
T Consensus       234 ~P~~R~~~~~~l~~h~~~~~~  254 (316)
T cd05592         234 DPTKRLGVDGDIRQHPFFRGI  254 (316)
T ss_pred             CHHHcCCChHHHHcCcccCCC
Confidence            99999986 588899999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=2.9e-45  Score=373.21  Aligned_cols=256  Identities=29%  Similarity=0.542  Sum_probs=215.8

Q ss_pred             CeeecceeccCCceEEEEEEEc---cCCcEEEEEEeeccccC-ChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           82 KYTFGKELGRGEFGITHQCFEI---ETGETYACKKIAKEKLK-TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~---~~~~~~avK~i~~~~~~-~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      +|++++.||+|+||+||+|++.   .+|+.||+|++.+.... .....+.+..|+.+++.+.+||||+++++++..++.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            5899999999999999999764   47899999999765332 2233456788999999997799999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |+||||+++|+|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.....
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili---~~~~~~kl~DfG~~~~~~~  157 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL---DSEGHVVLTDFGLSKEFLS  157 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEE---CCCCCEEEeeCcCCccccc
Confidence            9999999999999999888889999999999999999999999999999999999999   5678999999999876432


Q ss_pred             C--CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCC----CHHHHHHHHHhCccCCCCCCCCC
Q 043828          238 G--EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDPWPK  309 (586)
Q Consensus       238 ~--~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~----~~~~~~~~i~~~~~~~~~~~~~~  309 (586)
                      .  ......+||+.|+|||++.+  .++.++|||||||++|+|++|..||...    ....+...+......+    ...
T Consensus       158 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~----~~~  233 (332)
T cd05614         158 EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPF----PSF  233 (332)
T ss_pred             cCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCC----CCC
Confidence            2  22334679999999999864  4788999999999999999999999643    2333444444433322    245


Q ss_pred             CCHHHHHHHHHccCCCCCCCC-----CHHHHhcCCCccCC
Q 043828          310 VSKEAKELVKNMLDPNPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      ++..+.+||.+||..||++||     +++++++||||+..
T Consensus       234 ~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         234 IGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            889999999999999999999     88999999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=6.6e-45  Score=369.51  Aligned_cols=251  Identities=27%  Similarity=0.527  Sum_probs=214.7

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG  166 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~g  166 (586)
                      +.||+|+||.||+|++..+++.||+|++.+...........+.+|+.++.++.+||||+++++++...+.+|+||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            46999999999999999999999999998765555445567888999998887899999999999999999999999999


Q ss_pred             CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC-CCCceeccc
Q 043828          167 GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIV  245 (586)
Q Consensus       167 g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~~~~~~~~  245 (586)
                      |+|..++.....+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.... .........
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili---~~~~~~kL~DfG~~~~~~~~~~~~~~~~  157 (329)
T cd05618          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFC  157 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCCEEEeeCCccccccCCCCcccccc
Confidence            9999998888889999999999999999999999999999999999999   667899999999987532 233344567


Q ss_pred             CCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCC---------CCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          246 GSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWA---------ETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       246 gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~---------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      ||+.|+|||++.+ .++.++|||||||++|+|++|..||..         .........+......++    ..++..+.
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p----~~~~~~~~  233 (329)
T cd05618         158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAA  233 (329)
T ss_pred             CCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC----CCCCHHHH
Confidence            9999999999864 688999999999999999999999952         112233444455544443    35789999


Q ss_pred             HHHHHccCCCCCCCCC------HHHHhcCCCccCC
Q 043828          316 ELVKNMLDPNPYNRLT------LEEVLENPWIKND  344 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps------~~eil~hp~~~~~  344 (586)
                      +||.+||+.||.+||+      +.++++||||+..
T Consensus       234 ~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~  268 (329)
T cd05618         234 SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  268 (329)
T ss_pred             HHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence            9999999999999998      5899999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=6.3e-45  Score=369.21  Aligned_cols=253  Identities=30%  Similarity=0.518  Sum_probs=219.1

Q ss_pred             eeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHH---hCCCCCCeeEEEEEEEeCCeEEE
Q 043828           83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMR---HLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~---~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      |++.+.||+|+||.||+|.+..+|+.||+|++.+.........+.+.+|+.++.   .+ +||||+++++++...+.+|+
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l-~hp~i~~~~~~~~~~~~~~l   79 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSE-RHPFLVNLFACFQTEDHVCF   79 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcccc-CCCChhceeeEEEcCCEEEE
Confidence            788999999999999999999999999999998664433334566777777654   45 79999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC-C
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP-G  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~  238 (586)
                      ||||++|++|..++.. ..+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++..... .
T Consensus        80 v~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill---~~~~~~kL~Dfg~~~~~~~~~  155 (324)
T cd05589          80 VMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLL---DTEGFVKIADFGLCKEGMGFG  155 (324)
T ss_pred             EEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE---CCCCcEEeCcccCCccCCCCC
Confidence            9999999999887754 579999999999999999999999999999999999999   5678999999999875332 2


Q ss_pred             CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          239 EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                      ......+|++.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+......++    ..++..+.+|
T Consensus       156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~l  231 (324)
T cd05589         156 DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYP----RFLSREAISI  231 (324)
T ss_pred             CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHH
Confidence            23345679999999999864 688999999999999999999999999888888888877765544    3578999999


Q ss_pred             HHHccCCCCCCCC-----CHHHHhcCCCccCC
Q 043828          318 VKNMLDPNPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       318 i~~~L~~dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      |.+||..||.+||     ++.++++||||++.
T Consensus       232 i~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~  263 (324)
T cd05589         232 MRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI  263 (324)
T ss_pred             HHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence            9999999999999     79999999999864

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=1e-44  Score=365.93  Aligned_cols=251  Identities=26%  Similarity=0.472  Sum_probs=217.2

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG  166 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~g  166 (586)
                      +.||+|+||+||+|.+..+++.||+|++.+..............|..++..+.+||||+++++++.+.+.+|+||||++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            46999999999999999999999999998764332333456677888888766899999999999999999999999999


Q ss_pred             CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC-CCceeccc
Q 043828          167 GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP-GEQFCEIV  245 (586)
Q Consensus       167 g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~  245 (586)
                      |+|..++.....+++..+..++.|++.||.|||++||+||||||+|||+   +.++.+||+|||++..... ........
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (316)
T cd05619          81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILL---DTDGHIKIADFGMCKENMLGDAKTCTFC  157 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE---CCCCCEEEccCCcceECCCCCCceeeec
Confidence            9999999887889999999999999999999999999999999999999   5678999999999875322 22334567


Q ss_pred             CCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCC
Q 043828          246 GSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDP  324 (586)
Q Consensus       246 gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  324 (586)
                      ||+.|+|||++.+ .++.++||||+||++|+|++|..||...+.......+......++    ..++..+++||.+||..
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~~  233 (316)
T cd05619         158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP----RWLTREAKDILVKLFVR  233 (316)
T ss_pred             CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHHHHHHHHhcc
Confidence            9999999999864 689999999999999999999999999888887777766554333    24789999999999999


Q ss_pred             CCCCCCCHH-HHhcCCCccCC
Q 043828          325 NPYNRLTLE-EVLENPWIKND  344 (586)
Q Consensus       325 dp~~Rps~~-eil~hp~~~~~  344 (586)
                      ||.+||++. +++.||||+..
T Consensus       234 ~P~~R~~~~~~l~~h~~~~~~  254 (316)
T cd05619         234 EPERRLGVKGDIRQHPFFREI  254 (316)
T ss_pred             CHhhcCCChHHHHcCcccCCC
Confidence            999999996 99999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9e-45  Score=361.37  Aligned_cols=259  Identities=31%  Similarity=0.488  Sum_probs=218.6

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      .|++.+.||+|+||+||++.+..+++.||+|++.............+.+|+.+++.+ +||||+++++++..++.+|+||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~   79 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVL   79 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc-CCCCEeeeeeeecCCCeEEEEE
Confidence            488999999999999999999999999999999765544333345677899999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          162 ELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       162 E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      ||+++|+|.+++...  ..+++..+..++.|++.||.|||+.||+||||||+||++   +.++.++|+|||++.......
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~~  156 (285)
T cd05605          80 TLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILL---DDYGHIRISDLGLAVEIPEGE  156 (285)
T ss_pred             eccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEE---CCCCCEEEeeCCCceecCCCC
Confidence            999999998887653  458999999999999999999999999999999999999   567899999999998765444


Q ss_pred             ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHH
Q 043828          240 QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV  318 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  318 (586)
                      ......|++.|+|||++. ..++.++||||+||++|+|++|..||.+.........+..............++..+.+||
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  236 (285)
T cd05605         157 TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSIC  236 (285)
T ss_pred             ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHH
Confidence            444567999999999986 4688899999999999999999999987665443333322222222222346889999999


Q ss_pred             HHccCCCCCCCC-----CHHHHhcCCCccCC
Q 043828          319 KNMLDPNPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       319 ~~~L~~dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      .+||..||.+||     +++++++||||...
T Consensus       237 ~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05605         237 RQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA  267 (285)
T ss_pred             HHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence            999999999999     99999999999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=1.2e-44  Score=366.74  Aligned_cols=256  Identities=27%  Similarity=0.501  Sum_probs=224.3

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|++.+.||+|+||.||+|.+..+|+.||+|++.+.........+.+..|+.++..+.+||+|+++++++.+.+.+|+||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            47888999999999999999999999999999987654334445667889999998866788999999999999999999


Q ss_pred             eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC-Cc
Q 043828          162 ELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-EQ  240 (586)
Q Consensus       162 E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~~  240 (586)
                      ||++||+|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++...... ..
T Consensus        81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill---~~~~~ikL~Dfg~~~~~~~~~~~  157 (323)
T cd05615          81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVML---DSEGHIKIADFGMCKEHMVDGVT  157 (323)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEeccccccccCCCCcc
Confidence            999999999999888889999999999999999999999999999999999999   56789999999998754322 22


Q ss_pred             eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHH
Q 043828          241 FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK  319 (586)
Q Consensus       241 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  319 (586)
                      .....||+.|+|||++. ..++.++||||+||++|+|++|..||.+.+.......+......++    ..++..+.+++.
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~  233 (323)
T cd05615         158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP----KSLSKEAVSICK  233 (323)
T ss_pred             ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----ccCCHHHHHHHH
Confidence            33467999999999986 4689999999999999999999999999988888888887766544    357899999999


Q ss_pred             HccCCCCCCCCC-----HHHHhcCCCccCC
Q 043828          320 NMLDPNPYNRLT-----LEEVLENPWIKND  344 (586)
Q Consensus       320 ~~L~~dp~~Rps-----~~eil~hp~~~~~  344 (586)
                      +||.++|.+|++     ..++++||||+..
T Consensus       234 ~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~  263 (323)
T cd05615         234 GLMTKHPSKRLGCGPEGERDIREHAFFRRI  263 (323)
T ss_pred             HHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence            999999999997     5799999999864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=1.4e-44  Score=380.14  Aligned_cols=254  Identities=28%  Similarity=0.434  Sum_probs=208.2

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC-----
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK-----  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~-----  154 (586)
                      ..+|++++.||+|+||.||+|++..+++.||+|++....       ....+|+.+|+.+ +||||++++++|...     
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l-~h~niv~l~~~~~~~~~~~~  136 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNL-NHINIIFLKDYYYTECFKKN  136 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhc-CCCCCcceeeeEeecccccC
Confidence            468999999999999999999999999999999885432       2345799999999 899999999887532     


Q ss_pred             ---CeEEEEEeccCCCChHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEe
Q 043828          155 ---DAIYLVMELCEGGELFDRIV----NKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI  227 (586)
Q Consensus       155 ---~~~~iv~E~~~gg~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~  227 (586)
                         ..+++||||+++ +|.+++.    ....+++..++.++.||+.||.|||++||+||||||+|||++  ...+.+||+
T Consensus       137 ~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~--~~~~~vkL~  213 (440)
T PTZ00036        137 EKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLID--PNTHTLKLC  213 (440)
T ss_pred             CCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEc--CCCCceeee
Confidence               257899999975 6766654    346799999999999999999999999999999999999994  234579999


Q ss_pred             ecccccccCCCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCc------
Q 043828          228 DFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK------  299 (586)
Q Consensus       228 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~------  299 (586)
                      |||+|.............||+.|+|||++.+  .|+.++|||||||++|+|++|.+||.+.+.......+....      
T Consensus       214 DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~  293 (440)
T PTZ00036        214 DFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTED  293 (440)
T ss_pred             ccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence            9999987765555556788999999999753  58999999999999999999999999877665555443311      


Q ss_pred             -----------cCCCCCC--------CCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          300 -----------IDFERDP--------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       300 -----------~~~~~~~--------~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                 +.++...        ....+.++++||.+||.+||.+|||+.|+|.||||...
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~  357 (440)
T PTZ00036        294 QLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDL  357 (440)
T ss_pred             HHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence                       1111100        12367899999999999999999999999999999764

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.2e-44  Score=369.75  Aligned_cols=258  Identities=31%  Similarity=0.476  Sum_probs=210.9

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC-----Ce
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK-----DA  156 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~-----~~  156 (586)
                      +|++.+.||+|+||.||+|++..+|..||+|++..... .......+.+|+.+++.+ +||||+++++++...     ..
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~   78 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE-HVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREFKD   78 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc-cchhHHHHHHHHHHHHhC-CCCCEeeecceEeccCCCCCce
Confidence            58999999999999999999999999999999864322 222345688999999999 899999999988543     35


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|+|||||. ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++....
T Consensus        79 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kL~Dfg~~~~~~  154 (338)
T cd07859          79 IYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA---NADCKLKICDFGLARVAF  154 (338)
T ss_pred             EEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEccCccccccc
Confidence            899999995 6899999888889999999999999999999999999999999999999   677899999999987543


Q ss_pred             CCC----ceecccCCccccchhhhh---ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHh------------
Q 043828          237 PGE----QFCEIVGSPYYMAPEVLR---RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR------------  297 (586)
Q Consensus       237 ~~~----~~~~~~gt~~y~aPE~l~---~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~------------  297 (586)
                      ...    ......||+.|+|||++.   ..++.++|||||||++|+|++|.+||.+.+.......+..            
T Consensus       155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (338)
T cd07859         155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISR  234 (338)
T ss_pred             cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence            211    123467999999999985   3688999999999999999999999987654332221111            


Q ss_pred             ---------------CccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          298 ---------------GKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       298 ---------------~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                                     .........++.+++.+.+||.+||..||++|||++++|+||||+...
T Consensus       235 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~  297 (338)
T cd07859         235 VRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLA  297 (338)
T ss_pred             hhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcC
Confidence                           000000112346788999999999999999999999999999998643

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-44  Score=366.23  Aligned_cols=260  Identities=29%  Similarity=0.500  Sum_probs=220.0

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.++..+ +||||+++++++.+++.+|+|
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv   79 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG-DRRWITNLHYAFQDENNLYLV   79 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCceEEEEecCCeEEEE
Confidence            4799999999999999999999999999999999865444444456788999999998 999999999999999999999


Q ss_pred             EeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||++||+|.+++.. ...+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||++.......
T Consensus        80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~~  156 (331)
T cd05597          80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLL---DKNGHIRLADFGSCLRLLADG  156 (331)
T ss_pred             EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEE---CCCCCEEEEECCceeecCCCC
Confidence            999999999999976 4579999999999999999999999999999999999999   567899999999987654332


Q ss_pred             c--eecccCCccccchhhhh------ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCC-CCCCCC
Q 043828          240 Q--FCEIVGSPYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER-DPWPKV  310 (586)
Q Consensus       240 ~--~~~~~gt~~y~aPE~l~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~  310 (586)
                      .  ....+||+.|+|||++.      +.++.++||||+||++|+|++|..||...+..+....+......+.. ...+.+
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  236 (331)
T cd05597         157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDV  236 (331)
T ss_pred             CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCC
Confidence            2  22356999999999985      24788999999999999999999999988877777776654332221 123458


Q ss_pred             CHHHHHHHHHccCCCCCC--CCCHHHHhcCCCccCC
Q 043828          311 SKEAKELVKNMLDPNPYN--RLTLEEVLENPWIKND  344 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~--Rps~~eil~hp~~~~~  344 (586)
                      +..+++||.+||..++.+  |+++.++++||||...
T Consensus       237 ~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~  272 (331)
T cd05597         237 SEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI  272 (331)
T ss_pred             CHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence            999999999998764443  7899999999999764

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-46  Score=365.96  Aligned_cols=260  Identities=34%  Similarity=0.603  Sum_probs=237.4

Q ss_pred             ccCeeec--ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           80 LDKYTFG--KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        80 ~~~y~~~--~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ..-|+|.  +.||.|.||+||-|++.++|+.||||+|.+..+.... .+++++|+.||+.+ .||.||.+.-.|+..+.+
T Consensus       561 stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kq-esqlR~EVaILq~l-~HPGiV~le~M~ET~erv  638 (888)
T KOG4236|consen  561 STVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQ-ESQLRNEVAILQNL-HHPGIVNLECMFETPERV  638 (888)
T ss_pred             HHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCch-HHHHHHHHHHHHhc-CCCCeeEEEEeecCCceE
Confidence            3446665  6899999999999999999999999999998876644 37899999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          158 YLVMELCEGGELFDRIV--NKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      ++|||-+.| ++.+.+.  +.+++++.....++.||+.||.|||.++|+|.||||+|||+.+.+....+||||||+|+.+
T Consensus       639 FVVMEKl~G-DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiI  717 (888)
T KOG4236|consen  639 FVVMEKLHG-DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARII  717 (888)
T ss_pred             EEEehhhcc-hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeec
Confidence            999999955 6656554  4688999999999999999999999999999999999999988788889999999999999


Q ss_pred             CCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          236 KPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       236 ~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      .+.....+.+|||.|+|||++. +.|+..-|+||.|||+|--++|..||..  .+++-..|.+..+-+|..+|..+++++
T Consensus       718 gEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE--dEdIndQIQNAaFMyPp~PW~eis~~A  795 (888)
T KOG4236|consen  718 GEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE--DEDINDQIQNAAFMYPPNPWSEISPEA  795 (888)
T ss_pred             chhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCC--ccchhHHhhccccccCCCchhhcCHHH
Confidence            8877778899999999999997 5799999999999999999999999954  356778889999999999999999999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +|||..+|+..-.+|.|++..|.|||++++
T Consensus       796 idlIn~LLqVkm~kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  796 IDLINNLLQVKMRKRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             HHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence            999999999999999999999999999975

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.4e-44  Score=366.44  Aligned_cols=251  Identities=34%  Similarity=0.593  Sum_probs=217.9

Q ss_pred             cceeccCCceEEEEEEEc---cCCcEEEEEEeeccccC-ChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           86 GKELGRGEFGITHQCFEI---ETGETYACKKIAKEKLK-TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        86 ~~~lG~G~~g~V~~~~~~---~~~~~~avK~i~~~~~~-~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      ++.||+|+||.||+|++.   .+++.||+|++.+.... .......+.+|+.+|+.+ +||||+++++++..++.+|+||
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv~   79 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV-KHPFIVDLIYAFQTGGKLYLIL   79 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC-CCCchhceeeEEecCCeEEEEE
Confidence            367999999999999864   47889999999765432 223345678899999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC-CCc
Q 043828          162 ELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP-GEQ  240 (586)
Q Consensus       162 E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~  240 (586)
                      ||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++..... ...
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~~~  156 (323)
T cd05584          80 EYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL---DAQGHVKLTDFGLCKESIHEGTV  156 (323)
T ss_pred             eCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEeeCcCCeecccCCCc
Confidence            999999999999888889999999999999999999999999999999999999   5678999999999875432 222


Q ss_pred             eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHH
Q 043828          241 FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK  319 (586)
Q Consensus       241 ~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  319 (586)
                      .....||+.|+|||++.+ .++.++|||||||++|+|++|..||...+.......+..+...++    +.+++.+.+||.
T Consensus       157 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~  232 (323)
T cd05584         157 THTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLP----PYLTPEARDLLK  232 (323)
T ss_pred             ccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHH
Confidence            334679999999999864 578899999999999999999999999888888888877765443    357899999999


Q ss_pred             HccCCCCCCCC-----CHHHHhcCCCccCC
Q 043828          320 NMLDPNPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       320 ~~L~~dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      +||.+||++||     ++.++++||||+..
T Consensus       233 ~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~  262 (323)
T cd05584         233 KLLKRNPSSRLGAGPGDAAEVQSHPFFRHV  262 (323)
T ss_pred             HHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence            99999999999     89999999999864

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=9.7e-45  Score=367.70  Aligned_cols=250  Identities=27%  Similarity=0.523  Sum_probs=215.7

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHH-HHhCCCCCCeeEEEEEEEeCCeEEEEEeccC
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI-MRHLPKHPNIVTYKEAYEDKDAIYLVMELCE  165 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~-l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~  165 (586)
                      +.||+|+||+||+|++..+|+.||+|++.+...........+..|..+ ++.+ +||||+++++++...+.+|+||||++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~   79 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTADKLYFVLDYVN   79 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC-CCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence            469999999999999999999999999987644333333455556554 5667 89999999999999999999999999


Q ss_pred             CCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC-CCceecc
Q 043828          166 GGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP-GEQFCEI  244 (586)
Q Consensus       166 gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~  244 (586)
                      +|+|..++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++..... .......
T Consensus        80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll---~~~~~~kl~Dfg~~~~~~~~~~~~~~~  156 (323)
T cd05575          80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGIEHSKTTSTF  156 (323)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE---CCCCcEEEeccCCCcccccCCCccccc
Confidence            99999999888889999999999999999999999999999999999999   5678999999999875322 2233456


Q ss_pred             cCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccC
Q 043828          245 VGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD  323 (586)
Q Consensus       245 ~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~  323 (586)
                      +||+.|+|||++.+ .++.++|||||||++|+|++|..||...+..+....+.......+    +.++..+.+||.+||+
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~  232 (323)
T cd05575         157 CGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLK----PNISVSARHLLEGLLQ  232 (323)
T ss_pred             cCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhh
Confidence            79999999999864 688999999999999999999999999888888888777655433    4578999999999999


Q ss_pred             CCCCCCCCH----HHHhcCCCccCC
Q 043828          324 PNPYNRLTL----EEVLENPWIKND  344 (586)
Q Consensus       324 ~dp~~Rps~----~eil~hp~~~~~  344 (586)
                      .||.+||++    .++++||||...
T Consensus       233 ~~p~~R~~~~~~~~~il~~~~~~~~  257 (323)
T cd05575         233 KDRTKRLGAKDDFLEIKNHVFFSSI  257 (323)
T ss_pred             cCHHhCCCCCCCHHHHHcCCCcCCC
Confidence            999999987    699999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=3.5e-44  Score=364.81  Aligned_cols=258  Identities=26%  Similarity=0.375  Sum_probs=217.3

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.+.||+|+||.||+|++..+|..+|+|++....  .......+.+|+.+++++ +||||+++++++..++.+++
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l   80 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISI   80 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEE
Confidence            368999999999999999999999999999999987642  223346789999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN-GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||+   +.++.+||+|||++......
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~  157 (331)
T cd06649          81 CMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDS  157 (331)
T ss_pred             EeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEE---cCCCcEEEccCccccccccc
Confidence            999999999999998888899999999999999999999986 69999999999999   56788999999998765332


Q ss_pred             CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc-----------------
Q 043828          239 EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI-----------------  300 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~-----------------  300 (586)
                       ......||+.|+|||++.+ .++.++|||||||++|+|++|..||......++...+.....                 
T Consensus       158 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (331)
T cd06649         158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPP  236 (331)
T ss_pred             -ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccc
Confidence             2334579999999999864 689999999999999999999999977665544332211100                 


Q ss_pred             ---------------------------CCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          301 ---------------------------DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       301 ---------------------------~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                                 ..+..+...++.++++||.+||.+||++|||+.++++||||+..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  307 (331)
T cd06649         237 GRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS  307 (331)
T ss_pred             cccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence                                       00111122467899999999999999999999999999999864

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=2.6e-44  Score=364.96  Aligned_cols=251  Identities=26%  Similarity=0.501  Sum_probs=215.0

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG  166 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~g  166 (586)
                      +.||+|+||.||+|.+..+++.||+|++.+.........+.+.+|+.++.++.+||||+++++++.+.+.+|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            46999999999999999999999999998765544455667889999999987899999999999999999999999999


Q ss_pred             CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc-CCCCceeccc
Q 043828          167 GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-KPGEQFCEIV  245 (586)
Q Consensus       167 g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~-~~~~~~~~~~  245 (586)
                      |+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++... .........+
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (327)
T cd05617          81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLL---DADGHIKLTDYGMCKEGLGPGDTTSTFC  157 (327)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---eCCCCEEEeccccceeccCCCCceeccc
Confidence            9999998888889999999999999999999999999999999999999   56788999999998753 2233345578


Q ss_pred             CCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCC-------CHHHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          246 GSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAE-------TEEGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       246 gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~-------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                      ||+.|+|||++. ..++.++|||||||++|+|++|..||...       ........+......++    ..++..+.++
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~l  233 (327)
T cd05617         158 GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIP----RFLSVKASHV  233 (327)
T ss_pred             CCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCC----CCCCHHHHHH
Confidence            999999999986 46889999999999999999999999532       22334444444433332    3578999999


Q ss_pred             HHHccCCCCCCCCC------HHHHhcCCCccCC
Q 043828          318 VKNMLDPNPYNRLT------LEEVLENPWIKND  344 (586)
Q Consensus       318 i~~~L~~dp~~Rps------~~eil~hp~~~~~  344 (586)
                      |.+||..||.+|++      +.++++||||+..
T Consensus       234 i~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~  266 (327)
T cd05617         234 LKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI  266 (327)
T ss_pred             HHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence            99999999999998      5799999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=4.7e-44  Score=380.33  Aligned_cols=259  Identities=21%  Similarity=0.317  Sum_probs=204.8

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCC-----CCCCeeEEEEEEEeC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP-----KHPNIVTYKEAYEDK  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-----~hpnIv~l~~~~~~~  154 (586)
                      .++|++.+.||+|+||+||+|.+..+++.||||++....    ........|+.+++.+.     +|++|++++++|...
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~  203 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE  203 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence            468999999999999999999999999999999986432    11234566777777761     345689999998764


Q ss_pred             -CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeecCC-------------
Q 043828          155 -DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHRDLKPENFLFADGS-------------  219 (586)
Q Consensus       155 -~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivHrDlkp~Nill~~~~-------------  219 (586)
                       .++|||||++ |++|.+++...+.+++..+..++.||+.||.|||+ .|||||||||+|||+....             
T Consensus       204 ~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~  282 (467)
T PTZ00284        204 TGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPP  282 (467)
T ss_pred             CceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCC
Confidence             5789999998 77999999888889999999999999999999998 5999999999999995321             


Q ss_pred             CCCceEEeecccccccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhC
Q 043828          220 ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRG  298 (586)
Q Consensus       220 ~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~  298 (586)
                      ....+||+|||.+....  ......+||+.|+|||++.+ .|+.++|||||||++|+|++|++||.+.+..+....+...
T Consensus       283 ~~~~vkl~DfG~~~~~~--~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~  360 (467)
T PTZ00284        283 DPCRVRICDLGGCCDER--HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKT  360 (467)
T ss_pred             CCceEEECCCCccccCc--cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            12359999999876432  22345689999999999864 6899999999999999999999999887765554443322


Q ss_pred             ccCCCCC------------------------------------CCC--CCCHHHHHHHHHccCCCCCCCCCHHHHhcCCC
Q 043828          299 KIDFERD------------------------------------PWP--KVSKEAKELVKNMLDPNPYNRLTLEEVLENPW  340 (586)
Q Consensus       299 ~~~~~~~------------------------------------~~~--~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~  340 (586)
                      ...++..                                    .+.  ..++.+.+||.+||..||.+|||++|+|+|||
T Consensus       361 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~  440 (467)
T PTZ00284        361 LGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPY  440 (467)
T ss_pred             cCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcc
Confidence            1111100                                    000  01356789999999999999999999999999


Q ss_pred             ccCCC
Q 043828          341 IKNDN  345 (586)
Q Consensus       341 ~~~~~  345 (586)
                      |....
T Consensus       441 ~~~~~  445 (467)
T PTZ00284        441 VLKYY  445 (467)
T ss_pred             ccccC
Confidence            98643

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=2.1e-44  Score=357.79  Aligned_cols=252  Identities=28%  Similarity=0.476  Sum_probs=208.9

Q ss_pred             eccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCCCC
Q 043828           89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGE  168 (586)
Q Consensus        89 lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~gg~  168 (586)
                      ||+|+||+||+|.+..+|+.||+|++.+.........+.+..|+.+++.+ +||||+++.+++..+..+|+||||+++|+
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~g~   79 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-HSRFIVSLAYAFQTKTDLCLVMTIMNGGD   79 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC-CCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence            79999999999999999999999999766544433446678899999999 99999999999999999999999999999


Q ss_pred             hHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-ceec
Q 043828          169 LFDRIVN----KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCE  243 (586)
Q Consensus       169 L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~  243 (586)
                      |..++..    ...+++..+..++.||+.||.|||+++|+||||||+||++   +.++.++|+|||++....... ....
T Consensus        80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~~~~~~~~~  156 (280)
T cd05608          80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLL---DNDGNVRISDLGLAVELKDGQSKTKG  156 (280)
T ss_pred             HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCccceecCCCCccccc
Confidence            9877743    3468999999999999999999999999999999999999   567889999999987654332 2234


Q ss_pred             ccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHcc
Q 043828          244 IVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNML  322 (586)
Q Consensus       244 ~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L  322 (586)
                      ..||+.|+|||++. ..++.++|||||||++|+|++|..||...........+.......+....+.++..+.+++.+||
T Consensus       157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  236 (280)
T cd05608         157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALL  236 (280)
T ss_pred             cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHh
Confidence            57899999999986 46889999999999999999999999765432222222222221122223468899999999999


Q ss_pred             CCCCCCCC-----CHHHHhcCCCccCC
Q 043828          323 DPNPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       323 ~~dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      +.||.+||     +++++++||||+..
T Consensus       237 ~~~P~~R~~~~~~~~~~~l~h~~~~~~  263 (280)
T cd05608         237 AKDPEKRLGFRDGNCDGLRTHPLFRDL  263 (280)
T ss_pred             cCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence            99999999     88999999999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=4.2e-44  Score=357.66  Aligned_cols=256  Identities=25%  Similarity=0.395  Sum_probs=209.2

Q ss_pred             cCeeecceeccCCceEEEEEEEcc-CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCC--CCCCeeEEEEEEE-----
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIE-TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP--KHPNIVTYKEAYE-----  152 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~-~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~--~hpnIv~l~~~~~-----  152 (586)
                      ++|++.+.||+|+||+||+|++.. +|+.+|+|++........ ....+.+|+.+++.+.  +||||+++++++.     
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~   79 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG-MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   79 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCC-chHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence            379999999999999999999854 467899999876543222 2245567888777663  6999999999885     


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecc
Q 043828          153 DKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG  230 (586)
Q Consensus       153 ~~~~~~iv~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg  230 (586)
                      ....+++||||++ ++|.+++...  ..+++..+..++.|++.||.|||++||+||||||+|||+   +.++.+||+|||
T Consensus        80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~---~~~~~~kl~Dfg  155 (290)
T cd07862          80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFG  155 (290)
T ss_pred             CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---cCCCCEEEcccc
Confidence            3456899999996 5898888653  458999999999999999999999999999999999999   567899999999


Q ss_pred             cccccCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCC----
Q 043828          231 LSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD----  305 (586)
Q Consensus       231 ~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~----  305 (586)
                      ++.............||+.|+|||++. ..++.++|||||||++|+|++|.+||.+.+..+....+..........    
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~  235 (290)
T cd07862         156 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR  235 (290)
T ss_pred             ceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchh
Confidence            998765544445567999999999985 468899999999999999999999999888777666665422111100    


Q ss_pred             -------------------CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          306 -------------------PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       306 -------------------~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                                         ..+.++..+++||.+||+.||++|||+.++|+||||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         236 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             hhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence                               113567889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7e-45  Score=369.99  Aligned_cols=250  Identities=30%  Similarity=0.546  Sum_probs=216.8

Q ss_pred             eccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCC--CCCCeeEEEEEEEeCCeEEEEEeccCC
Q 043828           89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP--KHPNIVTYKEAYEDKDAIYLVMELCEG  166 (586)
Q Consensus        89 lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~--~hpnIv~l~~~~~~~~~~~iv~E~~~g  166 (586)
                      ||+|+||+||+|++..+|+.||+|++.+..............|..++..+.  +||||+++++++.....+|+||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            799999999999999999999999997654433333445566777777654  799999999999999999999999999


Q ss_pred             CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC-CCceeccc
Q 043828          167 GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP-GEQFCEIV  245 (586)
Q Consensus       167 g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~~  245 (586)
                      |+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++..... .......+
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  157 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILL---DATGHIALCDFGLSKANLTDNKTTNTFC  157 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence            9999999888889999999999999999999999999999999999999   5678999999999875432 22334567


Q ss_pred             CCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccC
Q 043828          246 GSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD  323 (586)
Q Consensus       246 gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~  323 (586)
                      ||+.|+|||++.+  .++.++|||||||++|+|++|..||...+..+....+..+...++.   ..++..+.+||.+||.
T Consensus       158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~li~~~L~  234 (330)
T cd05586         158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPK---NVLSDEGRQFVKGLLN  234 (330)
T ss_pred             CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCC---ccCCHHHHHHHHHHcC
Confidence            9999999999863  4789999999999999999999999998888888888777665543   2478999999999999


Q ss_pred             CCCCCCC----CHHHHhcCCCccCC
Q 043828          324 PNPYNRL----TLEEVLENPWIKND  344 (586)
Q Consensus       324 ~dp~~Rp----s~~eil~hp~~~~~  344 (586)
                      +||.+||    ++.++++||||+..
T Consensus       235 ~~P~~R~~~~~~~~~ll~h~~~~~~  259 (330)
T cd05586         235 RNPQHRLGAHRDAVELKEHPFFADI  259 (330)
T ss_pred             CCHHHCCCCCCCHHHHhcCccccCC
Confidence            9999998    79999999999863

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=4.8e-44  Score=363.92  Aligned_cols=260  Identities=27%  Similarity=0.468  Sum_probs=220.8

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|+||.||++++..+++.+|+|++.+...........+..|+.++..+ +||||+++++++.+.+.+|+|
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv   79 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DNQWITTLHYAFQDENNLYLV   79 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCEEEEE
Confidence            4799999999999999999999999999999999764433333445678899999998 899999999999999999999


Q ss_pred             EeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||+++|+|.+++.. ...+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||++.......
T Consensus        80 ~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili---~~~~~~kL~DfG~a~~~~~~~  156 (332)
T cd05623          80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDG  156 (332)
T ss_pred             EeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---CCCCCEEEeecchheecccCC
Confidence            999999999999976 4678999999999999999999999999999999999999   567899999999987543322


Q ss_pred             c--eecccCCccccchhhhh------ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCC-CCCCC
Q 043828          240 Q--FCEIVGSPYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD-PWPKV  310 (586)
Q Consensus       240 ~--~~~~~gt~~y~aPE~l~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~  310 (586)
                      .  ....+||+.|+|||++.      ..++.++|||||||++|+|++|..||...+.......+......++.+ .+..+
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~  236 (332)
T cd05623         157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDV  236 (332)
T ss_pred             cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccC
Confidence            2  22357999999999985      347889999999999999999999999988888887777654433222 23468


Q ss_pred             CHHHHHHHHHccCCCCCC--CCCHHHHhcCCCccCC
Q 043828          311 SKEAKELVKNMLDPNPYN--RLTLEEVLENPWIKND  344 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~--Rps~~eil~hp~~~~~  344 (586)
                      +..+++||.+||..+|.+  |+++.++++||||.+.
T Consensus       237 s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~  272 (332)
T cd05623         237 SEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI  272 (332)
T ss_pred             CHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence            999999999999765544  6899999999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.4e-44  Score=363.89  Aligned_cols=259  Identities=36%  Similarity=0.627  Sum_probs=238.5

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      ......|.+...||+|.|++|.++++..+|..||+|.|.+....... ...+.+|+++|+.| +|||||+++.+.+....
T Consensus        52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~-~~k~~rev~imk~l-~HPnIvkl~~v~~t~~~  129 (596)
T KOG0586|consen   52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSK-RQKLGREVDIMKSL-NHPNIVKLFSVIETEAT  129 (596)
T ss_pred             cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHH-HHHHHHHHHHHHhc-CCcceeeeeeeeeecce
Confidence            34567899999999999999999999999999999999988766543 34589999999999 99999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|+||||+.+|.+++++.++++..+..+..++.|++.|++|||+++|||||||++|||+   +.+.++||+|||++..+.
T Consensus       130 lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL---~~~mnikIaDfgfS~~~~  206 (596)
T KOG0586|consen  130 LYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL---DENMNIKIADFGFSTFFD  206 (596)
T ss_pred             eEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccc---ccccceeeeccccceeec
Confidence            99999999999999999999999999999999999999999999999999999999999   677889999999999998


Q ss_pred             CCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          237 PGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      .+....+.+|++.|.|||++.+  .-++.+|+||+|+++|.|+.|.+||.+.+..+.......+++..+.    -++.++
T Consensus       207 ~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~----~ms~dc  282 (596)
T KOG0586|consen  207 YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPF----YMSCDC  282 (596)
T ss_pred             ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccc----eeechh
Confidence            8888889999999999999975  3478999999999999999999999999888888888888877665    378899


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ++||+++|.++|.+|++++++..|.|....
T Consensus       283 e~lLrk~lvl~Pskr~~~dqim~~~W~n~~  312 (596)
T KOG0586|consen  283 EDLLRKFLVLNPSKRGPCDQIMKDRWRNDL  312 (596)
T ss_pred             HHHHHHhhccCccccCCHHHhhhhcccchh
Confidence            999999999999999999999999999754

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=5.9e-44  Score=362.99  Aligned_cols=260  Identities=27%  Similarity=0.462  Sum_probs=221.2

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|+||.||+|++..+++.||+|++.+...........+.+|+.++..+ +||||+++++++.+.+.+|+|
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~l~~~~~~~~~~~lv   79 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG-DCQWITTLHYAFQDENYLYLV   79 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEE
Confidence            4799999999999999999999999999999999764433334455678899999988 899999999999999999999


Q ss_pred             EeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||++||+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||+   +..+.+||+|||++.......
T Consensus        80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~~  156 (331)
T cd05624          80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLL---DMNGHIRLADFGSCLKMNQDG  156 (331)
T ss_pred             EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEE---cCCCCEEEEeccceeeccCCC
Confidence            999999999999976 4678999999999999999999999999999999999999   567889999999997654332


Q ss_pred             ce--ecccCCccccchhhhhc------cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCC-CCCCCC
Q 043828          240 QF--CEIVGSPYYMAPEVLRR------NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER-DPWPKV  310 (586)
Q Consensus       240 ~~--~~~~gt~~y~aPE~l~~------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~  310 (586)
                      ..  ....||+.|+|||++.+      .++.++|||||||++|+|++|..||...+.......+......++. ..+..+
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~  236 (331)
T cd05624         157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDV  236 (331)
T ss_pred             ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccC
Confidence            22  23579999999999863      4788999999999999999999999988887777777665433322 223467


Q ss_pred             CHHHHHHHHHccCCCCCC--CCCHHHHhcCCCccCC
Q 043828          311 SKEAKELVKNMLDPNPYN--RLTLEEVLENPWIKND  344 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~--Rps~~eil~hp~~~~~  344 (586)
                      +..+++||.+||..++.+  |++++++++||||+..
T Consensus       237 ~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~  272 (331)
T cd05624         237 SEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI  272 (331)
T ss_pred             CHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence            899999999999876654  5699999999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.9e-46  Score=392.61  Aligned_cols=260  Identities=30%  Similarity=0.488  Sum_probs=234.3

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|.|++.||+|+||.|.+|+++.+++.||+|++.+-...+..+-..|..|-.+|..- +.+-|++++-.|+++.++|+
T Consensus        74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~-ns~Wiv~LhyAFQD~~~LYl  152 (1317)
T KOG0612|consen   74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFG-NSEWIVQLHYAFQDERYLYL  152 (1317)
T ss_pred             HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC-CcHHHHHHHHHhcCccceEE
Confidence            46899999999999999999999999999999999886555555667899999999876 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      ||||++||+|..++.+..++++..++.++..|+.||.-||+.|+|||||||+|||+   +..|+|||+|||.+..+....
T Consensus       153 VMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl---d~~GHikLADFGsClkm~~dG  229 (1317)
T KOG0612|consen  153 VMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL---DKSGHIKLADFGSCLKMDADG  229 (1317)
T ss_pred             EEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe---cccCcEeeccchhHHhcCCCC
Confidence            99999999999999998899999999999999999999999999999999999999   789999999999998876443


Q ss_pred             c--eecccCCccccchhhhh------ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhC--ccCCCCCCCCC
Q 043828          240 Q--FCEIVGSPYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRG--KIDFERDPWPK  309 (586)
Q Consensus       240 ~--~~~~~gt~~y~aPE~l~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~  309 (586)
                      .  ....+|||-|.+||+|.      +.|++.+|+||+||++|||+.|..||+..+--+++-+|.+-  .+.||  ....
T Consensus       230 ~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP--~~~~  307 (1317)
T KOG0612|consen  230 TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFP--DETD  307 (1317)
T ss_pred             cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCC--cccc
Confidence            3  34578999999999994      35899999999999999999999999999999999999876  55555  3356


Q ss_pred             CCHHHHHHHHHccCCCCCCCCC---HHHHhcCCCccCCCC
Q 043828          310 VSKEAKELVKNMLDPNPYNRLT---LEEVLENPWIKNDNH  346 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps---~~eil~hp~~~~~~~  346 (586)
                      +|.++++||.+++. +|..|..   ++++..||||.+..+
T Consensus       308 VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W  346 (1317)
T KOG0612|consen  308 VSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDW  346 (1317)
T ss_pred             cCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCCh
Confidence            99999999999996 5889998   999999999998654

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=2.9e-44  Score=364.56  Aligned_cols=250  Identities=26%  Similarity=0.514  Sum_probs=215.2

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHH-HHhCCCCCCeeEEEEEEEeCCeEEEEEeccC
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI-MRHLPKHPNIVTYKEAYEDKDAIYLVMELCE  165 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~-l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~  165 (586)
                      +.||+|+||+||+|++..+|+.||+|++.+...........+..|..+ ++.+ +||||+++++++...+.+|+||||++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~hp~iv~~~~~~~~~~~~~lv~e~~~   79 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTTEKLYFVLDFVN   79 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhC-CCCCCccEEEEEecCCEEEEEEcCCC
Confidence            469999999999999999999999999976644333334555666654 5556 89999999999999999999999999


Q ss_pred             CCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC-CCceecc
Q 043828          166 GGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP-GEQFCEI  244 (586)
Q Consensus       166 gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~~~~~~~  244 (586)
                      ||+|..++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++..... .......
T Consensus        80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll---~~~~~~kL~DfG~~~~~~~~~~~~~~~  156 (325)
T cd05604          80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILL---DSQGHVVLTDFGLCKEGIAQSDTTTTF  156 (325)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEEeecCCcccCCCCCCCcccc
Confidence            99999999888889999999999999999999999999999999999999   5678999999999875322 2333456


Q ss_pred             cCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccC
Q 043828          245 VGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD  323 (586)
Q Consensus       245 ~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~  323 (586)
                      +||+.|+|||++.+ .++.++|||||||++|+|++|..||...+...+...+.......+    +.++..+.++|.+||.
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~ll~  232 (325)
T cd05604         157 CGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR----PGASLTAWSILEELLE  232 (325)
T ss_pred             cCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCC----CCCCHHHHHHHHHHhc
Confidence            79999999999864 688999999999999999999999999888888887777654433    3578999999999999


Q ss_pred             CCCCCCCCH----HHHhcCCCccCC
Q 043828          324 PNPYNRLTL----EEVLENPWIKND  344 (586)
Q Consensus       324 ~dp~~Rps~----~eil~hp~~~~~  344 (586)
                      .+|.+||++    .++++||||...
T Consensus       233 ~~p~~R~~~~~~~~~i~~h~~f~~~  257 (325)
T cd05604         233 KDRQRRLGAKEDFLEIQEHPFFESL  257 (325)
T ss_pred             cCHHhcCCCCCCHHHHhcCCCcCCC
Confidence            999999976    599999999863

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-46  Score=370.93  Aligned_cols=257  Identities=28%  Similarity=0.465  Sum_probs=226.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .+.|.|+..||.|+||.||+|.++.++-..|.|+|.-   +.+..++.+.-||.||..+ +||+||+|++.|..++.+||
T Consensus        31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet---kseEELEDylVEIeILa~C-dHP~ivkLl~ayy~enkLwi  106 (1187)
T KOG0579|consen   31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET---KSEEELEDYLVEIEILAEC-DHPVIVKLLSAYYFENKLWI  106 (1187)
T ss_pred             HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc---cchhHHhhhhhhhhhhhcC-CChHHHHHHHHHhccCceEE
Confidence            3579999999999999999999998888888898843   3456678899999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC-C
Q 043828          160 VMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-P  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~-~  237 (586)
                      +.|||.||-....+.. ...+++.++.-+++|++.||.|||+++|||||||..|||+   .-+|.|+|+|||.+.... .
T Consensus       107 liEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~---TldGdirLADFGVSAKn~~t  183 (1187)
T KOG0579|consen  107 LIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILL---TLDGDIRLADFGVSAKNKST  183 (1187)
T ss_pred             EEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEE---EecCcEeeecccccccchhH
Confidence            9999999999877765 4579999999999999999999999999999999999999   578899999999875432 2


Q ss_pred             CCceecccCCccccchhhhh------ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCC
Q 043828          238 GEQFCEIVGSPYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS  311 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  311 (586)
                      .....++.|||+|||||++.      .+|+.++||||||++|.+|..+.+|-...++..++.+|.+...+.-..+ .+++
T Consensus       184 ~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqP-S~Ws  262 (1187)
T KOG0579|consen  184 RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQP-SHWS  262 (1187)
T ss_pred             HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCc-chhh
Confidence            23445789999999999874      3699999999999999999999999999999988888877654433222 5688


Q ss_pred             HHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       312 ~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ..+.||+.+||.+||..||++.++|+||||.+.
T Consensus       263 ~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~  295 (1187)
T KOG0579|consen  263 RSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNA  295 (1187)
T ss_pred             hHHHHHHHHHHhcCCccCCCHHHHhhCcccccC
Confidence            999999999999999999999999999999964

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.8e-44  Score=356.60  Aligned_cols=253  Identities=28%  Similarity=0.465  Sum_probs=205.9

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ..|+++++||.||.+.||+|..-. .+.||+|++.... .+...+..+.+||..|.+|.+|.+||+|++|-..++.+|||
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~-~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv  438 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLE-ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV  438 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhh-cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence            579999999999999999997543 4567777764433 24556788999999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||- ..+|..+|..... ++.-.++.+..||+.|+.++|+.||||.||||.|+|+.    .|.+||+|||+|..+.+..
T Consensus       439 mE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV----kG~LKLIDFGIA~aI~~DT  513 (677)
T KOG0596|consen  439 MECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV----KGRLKLIDFGIANAIQPDT  513 (677)
T ss_pred             eecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE----eeeEEeeeechhcccCccc
Confidence            9975 5699999987654 34357888999999999999999999999999999995    5799999999999886654


Q ss_pred             c---eecccCCccccchhhhhc------------cCCCcchHHHHHHHHHHHhhCCCCCCCCC-HHHHHHHHHhCcc--C
Q 043828          240 Q---FCEIVGSPYYMAPEVLRR------------NYGPEIDVWSAGVIIYILLCGVPPFWAET-EEGIAHAIIRGKI--D  301 (586)
Q Consensus       240 ~---~~~~~gt~~y~aPE~l~~------------~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~~i~~~~~--~  301 (586)
                      .   ....+||+.|||||.+..            ..++++||||||||||+|+.|++||.... ...-+..|.....  .
T Consensus       514 TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Ie  593 (677)
T KOG0596|consen  514 TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIE  593 (677)
T ss_pred             cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCcccc
Confidence            3   345799999999999842            14678999999999999999999996643 2233344444332  3


Q ss_pred             CCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       302 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      |+.-  +. ..++.++++.||..||.+|||+.++|+|||++.
T Consensus       594 fp~~--~~-~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  594 FPDI--PE-NDELIDVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             ccCC--CC-chHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence            3322  11 123999999999999999999999999999985

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=1.3e-44  Score=368.09  Aligned_cols=256  Identities=30%  Similarity=0.463  Sum_probs=215.1

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCC-----CCeeEEEEEEEeCC
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH-----PNIVTYKEAYEDKD  155 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~h-----pnIv~l~~~~~~~~  155 (586)
                      .+|.+.+.||+|+||.|.+|.+..|++.||||+++...    ....+...|+.+|..|.+|     -|||+++++|...+
T Consensus       186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~  261 (586)
T KOG0667|consen  186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN  261 (586)
T ss_pred             EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc
Confidence            37899999999999999999999999999999997653    2346677899999999534     48999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                      ++|||+|.+ .-+|+++++.+.  .++...++.+++||+.||.+||+.+|||.||||+|||+.+.. ...|||+|||+|.
T Consensus       262 HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~-r~~vKVIDFGSSc  339 (586)
T KOG0667|consen  262 HLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPK-RSRIKVIDFGSSC  339 (586)
T ss_pred             ceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCC-cCceeEEeccccc
Confidence            999999999 569999998754  588999999999999999999999999999999999998643 4489999999998


Q ss_pred             ccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccC-----------
Q 043828          234 FFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID-----------  301 (586)
Q Consensus       234 ~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~-----------  301 (586)
                      ....  ...+.+.+..|+|||++-+ .|+.+.||||||||++||++|.+.|.+.++.+++..|..-...           
T Consensus       340 ~~~q--~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~  417 (586)
T KOG0667|consen  340 FESQ--RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKK  417 (586)
T ss_pred             ccCC--cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccc
Confidence            7543  3347788999999999864 8999999999999999999999999999888777666431100           


Q ss_pred             ----CCC-CC-------------------------------CC------------CCCHHHHHHHHHccCCCCCCCCCHH
Q 043828          302 ----FER-DP-------------------------------WP------------KVSKEAKELVKNMLDPNPYNRLTLE  333 (586)
Q Consensus       302 ----~~~-~~-------------------------------~~------------~~~~~~~~li~~~L~~dp~~Rps~~  333 (586)
                          |.. ..                               .|            .-...+.+||++||.+||.+|+|+.
T Consensus       418 ~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~  497 (586)
T KOG0667|consen  418 AHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPA  497 (586)
T ss_pred             cceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHH
Confidence                000 00                               00            1124689999999999999999999


Q ss_pred             HHhcCCCccCC
Q 043828          334 EVLENPWIKND  344 (586)
Q Consensus       334 eil~hp~~~~~  344 (586)
                      ++|+||||...
T Consensus       498 qal~Hpfl~~~  508 (586)
T KOG0667|consen  498 QALNHPFLTGT  508 (586)
T ss_pred             HHhcCcccccc
Confidence            99999999853

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.1e-43  Score=367.52  Aligned_cols=252  Identities=22%  Similarity=0.385  Sum_probs=206.8

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ...+|++++.||+|+||.||+|++..+++.||+|+...         ..+.+|+.++++| +||||++++++|......+
T Consensus        90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~  159 (391)
T PHA03212         90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAI-NHPSIIQLKGTFTYNKFTC  159 (391)
T ss_pred             ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhC-CCCCCCCEeEEEEECCeeE
Confidence            34689999999999999999999999999999996532         3467899999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      +|+|++. ++|..++.....+++..+..++.||+.||.|||++||+||||||+|||+   +..+.+||+|||+|......
T Consensus       160 lv~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll---~~~~~vkL~DFG~a~~~~~~  235 (391)
T PHA03212        160 LILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFI---NHPGDVCLGDFGAACFPVDI  235 (391)
T ss_pred             EEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEE---cCCCCEEEEeCCcccccccc
Confidence            9999995 6898988888889999999999999999999999999999999999999   56788999999998753221


Q ss_pred             --CceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCC-------HHHHHHHHHhCcc--------
Q 043828          239 --EQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAET-------EEGIAHAIIRGKI--------  300 (586)
Q Consensus       239 --~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~~~~~~i~~~~~--------  300 (586)
                        ......+||+.|+|||++. ..|+.++|||||||++|+|++|..||....       ....+..+.....        
T Consensus       236 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~  315 (391)
T PHA03212        236 NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPI  315 (391)
T ss_pred             cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCc
Confidence              2233567999999999986 468999999999999999999998875432       1111111111100        


Q ss_pred             ------------------C--CCCCCC---CCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          301 ------------------D--FERDPW---PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       301 ------------------~--~~~~~~---~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                        .  ...+.|   ..++.++.+||.+||+.||.+|||++|+|+||||+..
T Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~  382 (391)
T PHA03212        316 DAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI  382 (391)
T ss_pred             chhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence                              0  001111   1346789999999999999999999999999999864

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=2.9e-44  Score=363.48  Aligned_cols=250  Identities=32%  Similarity=0.533  Sum_probs=218.0

Q ss_pred             cceeccCCceEEEEEEEc---cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEe
Q 043828           86 GKELGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVME  162 (586)
Q Consensus        86 ~~~lG~G~~g~V~~~~~~---~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E  162 (586)
                      ++.||+|+||.||++++.   .+|+.||+|++.+..... .....+.+|+.+++++ +||||+++++++..++.+|+|||
T Consensus         1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e   78 (318)
T cd05582           1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKV-RDRVRTKMERDILAEV-NHPFIVKLHYAFQTEGKLYLILD   78 (318)
T ss_pred             CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCEEEEEEc
Confidence            357999999999999763   578999999997654322 2335677899999999 89999999999999999999999


Q ss_pred             ccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC-Cce
Q 043828          163 LCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-EQF  241 (586)
Q Consensus       163 ~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~~~  241 (586)
                      |+++|+|.+++.....+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++...... ...
T Consensus        79 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kL~Dfg~~~~~~~~~~~~  155 (318)
T cd05582          79 FLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKA  155 (318)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEE---CCCCcEEEeeccCCcccCCCCCce
Confidence            99999999999888889999999999999999999999999999999999999   56788999999998765433 233


Q ss_pred             ecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHH
Q 043828          242 CEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN  320 (586)
Q Consensus       242 ~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  320 (586)
                      ....||+.|+|||++.+ .++.++|||||||++|+|++|..||...+.......+......++    ..+++.+.+||.+
T Consensus       156 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~  231 (318)
T cd05582         156 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMP----QFLSPEAQSLLRA  231 (318)
T ss_pred             ecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHH
Confidence            45679999999999864 678899999999999999999999999888888888777665543    3578999999999


Q ss_pred             ccCCCCCCCCC-----HHHHhcCCCccCC
Q 043828          321 MLDPNPYNRLT-----LEEVLENPWIKND  344 (586)
Q Consensus       321 ~L~~dp~~Rps-----~~eil~hp~~~~~  344 (586)
                      ||+.||.+||+     +.+++.||||...
T Consensus       232 ~l~~~P~~R~~a~~~~~~~~~~~~~~~~~  260 (318)
T cd05582         232 LFKRNPANRLGAGPDGVEEIKRHPFFSTI  260 (318)
T ss_pred             HhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence            99999999999     7889999999864

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=6.6e-44  Score=361.90  Aligned_cols=250  Identities=26%  Similarity=0.503  Sum_probs=213.8

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHH-HHHhCCCCCCeeEEEEEEEeCCeEEEEEeccC
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVE-IMRHLPKHPNIVTYKEAYEDKDAIYLVMELCE  165 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~-~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~  165 (586)
                      +.||+|+||+||+|++..+++.||+|++.+...........+..|.. +++.+ +||||+++++++...+.+|+||||++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~Iv~~~~~~~~~~~~~lv~e~~~   79 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTADKLYFVLDYIN   79 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC-CCCCCCceeEEEEcCCeEEEEEeCCC
Confidence            46999999999999999999999999997654333222334445544 45667 89999999999999999999999999


Q ss_pred             CCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC-CCCceecc
Q 043828          166 GGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEI  244 (586)
Q Consensus       166 gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~~~~~~~  244 (586)
                      ||+|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.... ........
T Consensus        80 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili---~~~~~~kl~DfG~a~~~~~~~~~~~~~  156 (325)
T cd05602          80 GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNGTTSTF  156 (325)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE---CCCCCEEEccCCCCcccccCCCCcccc
Confidence            99999999888889999999999999999999999999999999999999   567899999999987542 22233456


Q ss_pred             cCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccC
Q 043828          245 VGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD  323 (586)
Q Consensus       245 ~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~  323 (586)
                      +||+.|+|||++.+ .++.++|||||||++|+|++|.+||...+..+....+......+    .+.++..+.++|.+||+
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~li~~~l~  232 (325)
T cd05602         157 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL----KPNITNSARHLLEGLLQ  232 (325)
T ss_pred             cCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCC----CCCCCHHHHHHHHHHcc
Confidence            79999999999864 68899999999999999999999999988888877777665443    24689999999999999


Q ss_pred             CCCCCCCCHH----HHhcCCCccCC
Q 043828          324 PNPYNRLTLE----EVLENPWIKND  344 (586)
Q Consensus       324 ~dp~~Rps~~----eil~hp~~~~~  344 (586)
                      .||.+||++.    ++++|+||...
T Consensus       233 ~~p~~R~~~~~~~~~i~~~~~~~~~  257 (325)
T cd05602         233 KDRTKRLGAKDDFMEIKNHIFFSPI  257 (325)
T ss_pred             cCHHHCCCCCCCHHHHhcCcccCCC
Confidence            9999999876    89999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=1.2e-43  Score=353.26  Aligned_cols=255  Identities=30%  Similarity=0.505  Sum_probs=213.9

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      .|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+.+|+.+++++ +|++|+.+++.+.+.+.+|+||
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~   79 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVL   79 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhC-CCCCeeeeeEEEecCCEEEEEE
Confidence            377888999999999999999999999999998766544433345677899999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          162 ELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       162 E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      ||++|++|.+++...  ..+++..+..++.|++.||.|||+++|+||||||+||++   +..+.++|+|||++.......
T Consensus        80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~~~  156 (285)
T cd05630          80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQ  156 (285)
T ss_pred             EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE---CCCCCEEEeeccceeecCCCc
Confidence            999999999888643  358999999999999999999999999999999999999   567889999999987765444


Q ss_pred             ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHH---HHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          240 QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEG---IAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      ......|++.|+|||++. ..++.++||||+||++|+|++|..||.......   ....+...   ........+++.+.
T Consensus       157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  233 (285)
T cd05630         157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE---VQEEYSEKFSPDAR  233 (285)
T ss_pred             cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh---hhhhcCccCCHHHH
Confidence            444567999999999986 468899999999999999999999997654321   11111111   11122345788999


Q ss_pred             HHHHHccCCCCCCCCC-----HHHHhcCCCccC
Q 043828          316 ELVKNMLDPNPYNRLT-----LEEVLENPWIKN  343 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps-----~~eil~hp~~~~  343 (586)
                      +||.+||+.||.+|||     ++|+++||||+.
T Consensus       234 ~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~  266 (285)
T cd05630         234 SLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ  266 (285)
T ss_pred             HHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence            9999999999999999     999999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=7.5e-44  Score=360.97  Aligned_cols=250  Identities=26%  Similarity=0.499  Sum_probs=214.1

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHH-HHHhCCCCCCeeEEEEEEEeCCeEEEEEeccC
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVE-IMRHLPKHPNIVTYKEAYEDKDAIYLVMELCE  165 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~-~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~  165 (586)
                      +.||+|+||.||+|++..+|+.||+|++.+...........+..|+. +++.+ +||||+++++++.+.+.+|+|||||+
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e~~~   79 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL-KHPFLVGLHYSFQTAEKLYFVLDYVN   79 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCEEEEEEcCCC
Confidence            46999999999999999999999999997654433333445556655 56677 89999999999999999999999999


Q ss_pred             CCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC-CCCceecc
Q 043828          166 GGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEI  244 (586)
Q Consensus       166 gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~~~~~~~  244 (586)
                      |++|...+.....+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.... ........
T Consensus        80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~~~~~~  156 (321)
T cd05603          80 GGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILL---DSQGHVVLTDFGLCKEGVEPEETTSTF  156 (321)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE---CCCCCEEEccCCCCccCCCCCCccccc
Confidence            99999998888889999999999999999999999999999999999999   567899999999987532 22233456


Q ss_pred             cCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccC
Q 043828          245 VGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD  323 (586)
Q Consensus       245 ~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~  323 (586)
                      +||+.|+|||++.+ .++.++|||||||++|+|++|..||...+.......+......++    +..+..+.++|.+||+
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~~l~  232 (321)
T cd05603         157 CGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP----GGKTVAACDLLVGLLH  232 (321)
T ss_pred             cCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHcc
Confidence            79999999999864 688999999999999999999999999888888777776654443    3568899999999999


Q ss_pred             CCCCCCCCH----HHHhcCCCccCC
Q 043828          324 PNPYNRLTL----EEVLENPWIKND  344 (586)
Q Consensus       324 ~dp~~Rps~----~eil~hp~~~~~  344 (586)
                      .||.+||++    .++++||||...
T Consensus       233 ~~p~~R~~~~~~~~~~~~~~~~~~~  257 (321)
T cd05603         233 KDQRRRLGAKADFLEIKNHVFFSPI  257 (321)
T ss_pred             CCHhhcCCCCCCHHHHhCCCCcCCC
Confidence            999999975    599999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=2e-43  Score=352.36  Aligned_cols=255  Identities=26%  Similarity=0.415  Sum_probs=208.0

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCC--CCCCeeEEEEEEEe-----C
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP--KHPNIVTYKEAYED-----K  154 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~--~hpnIv~l~~~~~~-----~  154 (586)
                      +|++.+.||+|+||+||+|.+..+|+.||+|.+........ ....+.+|+.+++.+.  +||||+++++++..     .
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~   79 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDG-LPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE   79 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCC-CchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence            58999999999999999999999999999999876432221 1234566777777653  69999999998864     3


Q ss_pred             CeEEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          155 DAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                      ..+++||||+++ +|.+++...  ..+++..+..++.|++.||.|||+.||+||||||+||++   +.++.+||+|||++
T Consensus        80 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili---~~~~~~kl~dfg~~  155 (288)
T cd07863          80 TKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGQVKLADFGLA  155 (288)
T ss_pred             ceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECccCcc
Confidence            468999999975 888888653  348999999999999999999999999999999999999   56788999999999


Q ss_pred             cccCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccC----------
Q 043828          233 IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID----------  301 (586)
Q Consensus       233 ~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~----------  301 (586)
                      .............||+.|+|||++. ..++.++||||+||++|+|++|.+||...........+......          
T Consensus       156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (288)
T cd07863         156 RIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV  235 (288)
T ss_pred             ccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccc
Confidence            8765444444567899999999986 46899999999999999999999999887766555554331100          


Q ss_pred             ------CC-------CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          302 ------FE-------RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       302 ------~~-------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                            +.       ....+.++..+.+||.+||++||.+|||+.+++.||||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         236 TLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             cccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                  00       01124577889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=1.9e-43  Score=350.29  Aligned_cols=249  Identities=30%  Similarity=0.496  Sum_probs=208.5

Q ss_pred             eccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCCCC
Q 043828           89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGE  168 (586)
Q Consensus        89 lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~gg~  168 (586)
                      ||+|+||.||++.+..+|+.||+|++.............+..|+++++++ +||||++++++++.+..+|+||||++|++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~g~~   79 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV-NSPFIVNLAYAFESKTHLCLVMSLMNGGD   79 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc-CCCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence            79999999999999999999999999765443333334566799999999 89999999999999999999999999999


Q ss_pred             hHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCceecccC
Q 043828          169 LFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVG  246 (586)
Q Consensus       169 L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g  246 (586)
                      |.+++....  .+++..+..++.|++.||.|||+.||+||||||+||++   +.++.++|+|||++.............|
T Consensus        80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili---~~~~~~~l~Dfg~~~~~~~~~~~~~~~~  156 (277)
T cd05607          80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLL---DDQGNCRLSDLGLAVELKDGKTITQRAG  156 (277)
T ss_pred             HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEE---cCCCCEEEeeceeeeecCCCceeeccCC
Confidence            988876533  58899999999999999999999999999999999999   5678899999999987655444455679


Q ss_pred             Cccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCH----HHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHc
Q 043828          247 SPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETE----EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNM  321 (586)
Q Consensus       247 t~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~  321 (586)
                      ++.|+|||++. ..++.++||||+||++|+|++|..||.....    ..+..........+.   ...++.++++||.+|
T Consensus       157 ~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~  233 (277)
T cd05607         157 TNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFE---HQNFTEESKDICRLF  233 (277)
T ss_pred             CCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccc---cccCCHHHHHHHHHH
Confidence            99999999986 4589999999999999999999999976433    223333333332222   235789999999999


Q ss_pred             cCCCCCCCCCH----HHHhcCCCccCC
Q 043828          322 LDPNPYNRLTL----EEVLENPWIKND  344 (586)
Q Consensus       322 L~~dp~~Rps~----~eil~hp~~~~~  344 (586)
                      |++||.+||++    ++++.||||+..
T Consensus       234 L~~~P~~R~~~~~~~~~~~~h~~f~~~  260 (277)
T cd05607         234 LAKKPEDRLGSREKNDDPRKHEFFKTI  260 (277)
T ss_pred             hccCHhhCCCCccchhhhhcChhhcCC
Confidence            99999999999    778899999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-46  Score=344.27  Aligned_cols=253  Identities=26%  Similarity=0.477  Sum_probs=218.3

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      +-|.++++||+|+||.||++.++.+|+.+|+|.+..+     .++..+..||.||+++ +.|+||++|+.|.....+|||
T Consensus        33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC-~S~yVVKYYGSYFK~sDLWIV  106 (502)
T KOG0574|consen   33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQC-KSKYVVKYYGSYFKHSDLWIV  106 (502)
T ss_pred             HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHc-CCchhhhhhhhhccCCceEee
Confidence            4588999999999999999999999999999998654     3567899999999998 999999999999999999999


Q ss_pred             EeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      ||||..|+..+.++. +.++++..+..+++..+.||.|||...-+|||||..|||+   +..+..||+|||.|..+....
T Consensus       107 MEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILL---NT~G~AKLADFGVAGQLTDTM  183 (502)
T KOG0574|consen  107 MEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILL---NTDGIAKLADFGVAGQLTDTM  183 (502)
T ss_pred             hhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEE---cccchhhhhhccccchhhhhH
Confidence            999999999998874 5679999999999999999999999999999999999999   678999999999998765432


Q ss_pred             -ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCc-cCCCCCCCCCCCHHHHH
Q 043828          240 -QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK-IDFERDPWPKVSKEAKE  316 (586)
Q Consensus       240 -~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~  316 (586)
                       ...+..|||.|||||++.. .|+.++||||||++..||..|++||....+...+-.|-... ..|..  ...+|.++-|
T Consensus       184 AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~K--PE~WS~~F~D  261 (502)
T KOG0574|consen  184 AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKK--PEEWSSEFND  261 (502)
T ss_pred             HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCC--hHhhhhHHHH
Confidence             3456789999999999975 79999999999999999999999997765532222211111 11111  2357889999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ||++||-+.|++|-|+-++++|||+++.
T Consensus       262 Fi~~CLiK~PE~R~TA~~L~~H~FiknA  289 (502)
T KOG0574|consen  262 FIRSCLIKKPEERKTALRLCEHTFIKNA  289 (502)
T ss_pred             HHHHHhcCCHHHHHHHHHHhhhhhhcCC
Confidence            9999999999999999999999999975

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=1.7e-43  Score=356.45  Aligned_cols=258  Identities=28%  Similarity=0.436  Sum_probs=214.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +++|.+.+.||+|+||.||+|++..+++.+|+|++.......  ....+.+|+.+++++ +||||+++++++..++.+|+
T Consensus         5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l   81 (309)
T cd07872           5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG--APCTAIREVSLLKDL-KHANIVTLHDIVHTDKSLTL   81 (309)
T ss_pred             CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCC--cchhHHHHHHHHHhC-CCCCcceEEEEEeeCCeEEE
Confidence            468999999999999999999999999999999987553222  234567899999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||+++ +|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++   +..+.+||+|||++......
T Consensus        82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~~~~~~~~  157 (309)
T cd07872          82 VFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSVP  157 (309)
T ss_pred             EEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECccccceecCCC
Confidence            9999975 888877654 458999999999999999999999999999999999999   56789999999998764322


Q ss_pred             -CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc---------------
Q 043828          239 -EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI---------------  300 (586)
Q Consensus       239 -~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~---------------  300 (586)
                       .......+++.|+|||++.+  .++.++|||||||++|+|++|.+||.+.+..+....+.+...               
T Consensus       158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (309)
T cd07872         158 TKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDE  237 (309)
T ss_pred             ccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhh
Confidence             22234568999999999853  578899999999999999999999988776655544432111               


Q ss_pred             ----CCCC-------CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          301 ----DFER-------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       301 ----~~~~-------~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                          .++.       ...+.++.++++||.+||+.||.+|||+.|+|+||||+..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~  292 (309)
T cd07872         238 FKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL  292 (309)
T ss_pred             hhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhc
Confidence                1110       1123578899999999999999999999999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=3.4e-43  Score=350.03  Aligned_cols=259  Identities=32%  Similarity=0.502  Sum_probs=220.1

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      .|+..+.||.|+||+||+|.+..+++.+|+|.+.+...........+.+|+.+++.+ +|+||+.+++.+..++.+|+||
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~   79 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV-NSQFVVNLAYAYETKDALCLVL   79 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc-CCcCceeEEEEEecCCEEEEEE
Confidence            377888999999999999999999999999999776544443445678899999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          162 ELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       162 E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      ||+++++|.+++...  ..+++..+..++.|++.||.|||+.||+||||||+||++   +.++.++|+|||++.......
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili---~~~~~~kl~Dfg~~~~~~~~~  156 (285)
T cd05632          80 TIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILL---DDYGHIRISDLGLAVKIPEGE  156 (285)
T ss_pred             EeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE---CCCCCEEEecCCcceecCCCC
Confidence            999999998887653  369999999999999999999999999999999999999   566789999999987665444


Q ss_pred             ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHH
Q 043828          240 QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV  318 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  318 (586)
                      ......|++.|+|||++. ..++.++||||+||++|+|++|..||...........+..............++..+.+|+
T Consensus       157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  236 (285)
T cd05632         157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSIC  236 (285)
T ss_pred             cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHH
Confidence            445567999999999986 4688999999999999999999999987766544444433333222233356889999999


Q ss_pred             HHccCCCCCCCCC-----HHHHhcCCCccCC
Q 043828          319 KNMLDPNPYNRLT-----LEEVLENPWIKND  344 (586)
Q Consensus       319 ~~~L~~dp~~Rps-----~~eil~hp~~~~~  344 (586)
                      .+||+.||.+||+     +.+++.||||+..
T Consensus       237 ~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05632         237 KMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM  267 (285)
T ss_pred             HHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence            9999999999999     8999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.6e-45  Score=350.79  Aligned_cols=257  Identities=33%  Similarity=0.551  Sum_probs=229.0

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      +.|..-++||+||||.||.|.-..||+-||+|++.+..++...-.....+|-.||.++ ..|.||.+-.+|++.+.+++|
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV-~s~FiVslaYAfeTkd~LClV  263 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKV-SSPFIVSLAYAFETKDALCLV  263 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHh-ccCcEEEEeeeecCCCceEEE
Confidence            4677788999999999999999999999999999888777666667788999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          161 MELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      +..|.||+|.-.|.+.+  .+++..+..++.+|+.||.+||+.+||+|||||+|||+   +..|+|+|+|+|+|..++.+
T Consensus       264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILL---Dd~GhvRISDLGLAvei~~g  340 (591)
T KOG0986|consen  264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILL---DDHGHVRISDLGLAVEIPEG  340 (591)
T ss_pred             EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheee---ccCCCeEeeccceEEecCCC
Confidence            99999999988887755  79999999999999999999999999999999999999   78999999999999999999


Q ss_pred             CceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHH----HHHHHHHhCccCCCCCCCCCCCHH
Q 043828          239 EQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEE----GIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ......+||.+|||||++. +.|+...|+|||||++|+|+.|+.||......    ++-+.+......++    .+.|++
T Consensus       341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~----~kFS~e  416 (591)
T KOG0986|consen  341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYS----DKFSEE  416 (591)
T ss_pred             CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcc----cccCHH
Confidence            8888889999999999997 46999999999999999999999999765443    33334444443333    578999


Q ss_pred             HHHHHHHccCCCCCCCC-----CHHHHhcCCCccCCC
Q 043828          314 AKELVKNMLDPNPYNRL-----TLEEVLENPWIKNDN  345 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rp-----s~~eil~hp~~~~~~  345 (586)
                      +++|++.+|.+||.+|.     .++++.+||||+..+
T Consensus       417 akslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~ln  453 (591)
T KOG0986|consen  417 AKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLN  453 (591)
T ss_pred             HHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCC
Confidence            99999999999999998     678999999999743

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=8e-44  Score=349.57  Aligned_cols=254  Identities=37%  Similarity=0.679  Sum_probs=215.1

Q ss_pred             eeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEe
Q 043828           83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVME  162 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E  162 (586)
                      |++++.||+|+||+||+|.+..+++.||+|++........ ......+|+.+++++ +||||+++++++.+...+++|||
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~-~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~v~~   78 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEE-EREENIREIKILRRL-RHPNIVQILDVFQDDNYLYIVME   78 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHH-HHHHHHHHHHHHHHH-TBTTBCHEEEEEEESSEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccccc-ccchhhhhhhccccc-ccccccccccccccccccccccc
Confidence            8899999999999999999999999999999987653322 122345599999999 89999999999999999999999


Q ss_pred             ccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc-CCCCce
Q 043828          163 LCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-KPGEQF  241 (586)
Q Consensus       163 ~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~-~~~~~~  241 (586)
                      |+++++|.+++.....+++..+..++.||+.||.+||+++|+|+||||+||++   +.++.++|+|||.+... ......
T Consensus        79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~---~~~~~~~l~Dfg~~~~~~~~~~~~  155 (260)
T PF00069_consen   79 YCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILL---DENGEVKLIDFGSSVKLSENNENF  155 (260)
T ss_dssp             EETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEE---STTSEEEESSGTTTEESTSTTSEB
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccc
Confidence            99999999999877889999999999999999999999999999999999999   67889999999998763 333445


Q ss_pred             ecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCC---HHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          242 CEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAET---EEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       242 ~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      ....+++.|+|||++.  ..++.++||||||+++|+|++|..||....   .......................+..+.+
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  235 (260)
T PF00069_consen  156 NPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRD  235 (260)
T ss_dssp             SSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHH
Confidence            5678899999999987  468899999999999999999999998873   33333333333332222222223489999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      +|.+||+.||++|||+.++++||||
T Consensus       236 li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  236 LIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             HHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             HHHHHccCChhHCcCHHHHhcCCCC
Confidence            9999999999999999999999998

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=6.3e-44  Score=323.96  Aligned_cols=259  Identities=24%  Similarity=0.345  Sum_probs=219.5

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++.+++..||.|+.|.|++++...+|...|||.+.+...  ..+.+++...+.++..-.++|+||+.+++|..+..++|.
T Consensus        92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~N--kee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~Ic  169 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFIC  169 (391)
T ss_pred             HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCC--HHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHH
Confidence            456777889999999999999999999999999987653  334578888888887765799999999999999999999


Q ss_pred             EeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          161 MELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHE-NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||.|.. .+..++.. .++++|..+-.+...++.||.||.+ ++|+|||+||+|||+   +..|++||||||++-.+-..
T Consensus       170 MelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl---De~GniKlCDFGIsGrlvdS  245 (391)
T KOG0983|consen  170 MELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGNIKLCDFGISGRLVDS  245 (391)
T ss_pred             HHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE---ccCCCEEeecccccceeecc
Confidence            999843 44444443 5679999999999999999999986 589999999999999   78899999999999888777


Q ss_pred             CceecccCCccccchhhhh----ccCCCcchHHHHHHHHHHHhhCCCCCCCC-CHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          239 EQFCEIVGSPYYMAPEVLR----RNYGPEIDVWSAGVIIYILLCGVPPFWAE-TEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~----~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ...+...|.+.|||||-+.    ..|+-++||||||++++||.||+.||.+. +.-+++-.+.+... ...+.-.+.|+.
T Consensus       246 kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP-P~L~~~~gFSp~  324 (391)
T KOG0983|consen  246 KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP-PLLPGHMGFSPD  324 (391)
T ss_pred             cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC-CCCCcccCcCHH
Confidence            7777788999999999985    35889999999999999999999999874 44566666666443 222222358999


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhcCCCccCCCC
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH  346 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~  346 (586)
                      +++|+..||.+|+.+||...++|+|||++.+..
T Consensus       325 F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~  357 (391)
T KOG0983|consen  325 FQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYET  357 (391)
T ss_pred             HHHHHHHHhhcCcccCcchHHHhcCcceeecch
Confidence            999999999999999999999999999987654

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=5.3e-43  Score=356.17  Aligned_cols=258  Identities=25%  Similarity=0.388  Sum_probs=213.8

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.+.||.|+||.||+|.+..++..+|+|++....  .......+.+|+.+++.+ +||||+++++++.+++.+|+
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l   80 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISI   80 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHC-CCCcccceeEEEEECCEEEE
Confidence            368999999999999999999999999999999886542  223346788999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN-GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||+++++|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||+   +..+.+||+|||++......
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~~~~~~~~  157 (333)
T cd06650          81 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDS  157 (333)
T ss_pred             EEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEE---cCCCCEEEeeCCcchhhhhh
Confidence            999999999999998888899999999999999999999985 79999999999999   56778999999998765322


Q ss_pred             CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHh---Cc---------------
Q 043828          239 EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR---GK---------------  299 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~---~~---------------  299 (586)
                       ......|++.|+|||++.+ .++.++|||||||++|+|++|..||...........+..   +.               
T Consensus       158 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (333)
T cd06650         158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGR  236 (333)
T ss_pred             -ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccc
Confidence             2234578999999999864 588899999999999999999999976554333221100   00               


Q ss_pred             ----------------------cC--CCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          300 ----------------------ID--FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       300 ----------------------~~--~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                            ..  .+..+...++.++++||.+||++||++|||+.|++.||||+..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  305 (333)
T cd06650         237 PLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  305 (333)
T ss_pred             hhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence                                  00  0000112357889999999999999999999999999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=4.3e-43  Score=361.02  Aligned_cols=258  Identities=27%  Similarity=0.441  Sum_probs=208.8

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC--
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD--  155 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~--  155 (586)
                      .+.++|++.+.||+|+||.||+|.+..+|..||+|++..... .......+.+|+.+++.+ +||||+++++++....  
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~   95 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ-NQTHAKRAYRELVLLKCV-NHKNIISLLNVFTPQKSL   95 (359)
T ss_pred             hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc-chhHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCCc
Confidence            456899999999999999999999999999999999875432 223346778899999999 8999999999986543  


Q ss_pred             ----eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          156 ----AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       156 ----~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                          .+|+||||+++ +|...+.  ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+
T Consensus        96 ~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~---~~~~~~kl~Dfg~  169 (359)
T cd07876          96 EEFQDVYLVMELMDA-NLCQVIH--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL  169 (359)
T ss_pred             cccceeEEEEeCCCc-CHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEecCCC
Confidence                57999999965 5666553  348899999999999999999999999999999999999   5678999999999


Q ss_pred             ccccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHh-------------
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR-------------  297 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~-------------  297 (586)
                      +.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+..             
T Consensus       170 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (359)
T cd07876         170 ARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRL  249 (359)
T ss_pred             ccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHH
Confidence            976544444455678999999999864 689999999999999999999999987655433222211             


Q ss_pred             ---------CccCCCCC----------------CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          298 ---------GKIDFERD----------------PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       298 ---------~~~~~~~~----------------~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                               ....++..                .....++.+++||.+||..||.+|||+.|+|+||||..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         250 QPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             HHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence                     11111000                01124578999999999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=1.1e-42  Score=358.71  Aligned_cols=258  Identities=25%  Similarity=0.420  Sum_probs=211.1

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC---
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK---  154 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~---  154 (586)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.+ +||||+++++++...   
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~~~~~   98 (364)
T cd07875          21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSL   98 (364)
T ss_pred             chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCcccc-CchhHHHHHHHHHHHHhc-CCCCccccceeecccccc
Confidence            456899999999999999999999999999999999875432 223346678899999999 899999999987643   


Q ss_pred             ---CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          155 ---DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       155 ---~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                         ..+|+||||+++ +|...+..  .+++..+..++.|++.||.|||++||+||||||+|||+   +.++.+||+|||+
T Consensus        99 ~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~  172 (364)
T cd07875          99 EEFQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL  172 (364)
T ss_pred             cccCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEE---CCCCcEEEEeCCC
Confidence               357999999965 67776653  48889999999999999999999999999999999999   5678999999999


Q ss_pred             ccccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccC---------
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID---------  301 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~---------  301 (586)
                      +.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+......         
T Consensus       173 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (364)
T cd07875         173 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL  252 (364)
T ss_pred             ccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh
Confidence            987654444455679999999999864 6899999999999999999999999887766555444321110         


Q ss_pred             -------------CC----------------CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          302 -------------FE----------------RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       302 -------------~~----------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                                   +.                .......+..+++||.+||..||.+|||+.++|+||||..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         253 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             hHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence                         00                0001123567899999999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.4e-42  Score=369.21  Aligned_cols=254  Identities=27%  Similarity=0.396  Sum_probs=219.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEccC-CcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIET-GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~-~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ...|.+.+.||+|++|.||+|.+..+ +..+|+|++...   .......+.+|+.+++.+ +|||||++++++..++.+|
T Consensus        66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~  141 (478)
T PTZ00267         66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAAC-DHFGIVKHFDDFKSDDKLL  141 (478)
T ss_pred             ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEECCEEE
Confidence            34599999999999999999998777 778888876443   233345678899999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          159 LVMELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      |||||++||+|.+++..    ...+++..+..++.||+.||.|||+++|+||||||+|||+   +..+.+||+|||++..
T Consensus       142 lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll---~~~~~~kL~DFgla~~  218 (478)
T PTZ00267        142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFL---MPTGIIKLGDFGFSKQ  218 (478)
T ss_pred             EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEE---CCCCcEEEEeCcCcee
Confidence            99999999999887753    4468999999999999999999999999999999999999   5678999999999987


Q ss_pred             cCCCC---ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          235 FKPGE---QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       235 ~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      .....   .....+||+.|+|||++. ..++.++|||||||++|+|++|..||...+..++...+..+.....   ...+
T Consensus       219 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~  295 (478)
T PTZ00267        219 YSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPF---PCPV  295 (478)
T ss_pred             cCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC---CccC
Confidence            64332   133467999999999986 4689999999999999999999999998888888887776654321   2357


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      +..+++||.+||..||.+||++.+++.|||++.
T Consensus       296 s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~  328 (478)
T PTZ00267        296 SSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY  328 (478)
T ss_pred             CHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence            899999999999999999999999999999974

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=8.7e-43  Score=381.34  Aligned_cols=263  Identities=32%  Similarity=0.518  Sum_probs=217.5

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe--C
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED--K  154 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~--~  154 (586)
                      .....+|++++.||.|+||+||+|.+..++..+|+|++...... ......+..|+.+++.| +|||||+++++|..  .
T Consensus         9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~-e~~~~~~~~EI~IL~~L-~HPNIVrl~d~f~de~~   86 (1021)
T PTZ00266          9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK-EREKSQLVIEVNVMREL-KHKNIVRYIDRFLNKAN   86 (1021)
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC-HHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEecCC
Confidence            44567999999999999999999999999999999998765433 23356788999999999 89999999999864  4


Q ss_pred             CeEEEEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHc-------CceeccCCCCceEeecC-----
Q 043828          155 DAIYLVMELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHEN-------GVMHRDLKPENFLFADG-----  218 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~-------~ivHrDlkp~Nill~~~-----  218 (586)
                      ..+|||||||++|+|.++|..    ...+++..++.|+.||+.||.|||+.       +||||||||+|||+..+     
T Consensus        87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg  166 (1021)
T PTZ00266         87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG  166 (1021)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence            579999999999999998865    35799999999999999999999984       49999999999999532     


Q ss_pred             ---------CCCCceEEeecccccccCCCCceecccCCccccchhhhh---ccCCCcchHHHHHHHHHHHhhCCCCCCCC
Q 043828          219 ---------SENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR---RNYGPEIDVWSAGVIIYILLCGVPPFWAE  286 (586)
Q Consensus       219 ---------~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~DiwslG~il~~ll~g~~pf~~~  286 (586)
                               +....+||+|||++.............||+.|+|||++.   ..++.++||||||||||+|++|..||...
T Consensus       167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~  246 (1021)
T PTZ00266        167 KITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA  246 (1021)
T ss_pred             cccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence                     123469999999998765444444567999999999984   34789999999999999999999999765


Q ss_pred             CHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          287 TEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       287 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ..............   ..+....+..+.+||..||..+|.+||++.|+|.|||++..
T Consensus       247 ~~~~qli~~lk~~p---~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        247 NNFSQLISELKRGP---DLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV  301 (1021)
T ss_pred             CcHHHHHHHHhcCC---CCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence            54333333332222   22334578999999999999999999999999999999854

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=1.8e-42  Score=345.88  Aligned_cols=254  Identities=32%  Similarity=0.628  Sum_probs=224.8

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|+||.||+|.+..+++.+|+|++.+.........+.+.+|+.+++++ +||||+++++++.....+|+|
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v   79 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-RHPFLVNLYGSFQDDSNLYLV   79 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCeEEEE
Confidence            4799999999999999999999999999999999776544444457788999999999 799999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCc
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ  240 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~  240 (586)
                      |||+++++|.+++.....+++..+..++.||+.||.|||++||+||||+|.||++   +.++.+||+|||++......  
T Consensus        80 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili---~~~~~~kl~dfg~~~~~~~~--  154 (290)
T cd05580          80 MEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLL---DSDGYIKITDFGFAKRVKGR--  154 (290)
T ss_pred             EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---CCCCCEEEeeCCCccccCCC--
Confidence            9999999999999888889999999999999999999999999999999999999   56788999999998876443  


Q ss_pred             eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHH
Q 043828          241 FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK  319 (586)
Q Consensus       241 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  319 (586)
                      .....|++.|+|||.+. ..++.++||||||+++|+|++|..||...........+..+...++.    .++..++++|.
T Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~  230 (290)
T cd05580         155 TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPS----FFSPDAKDLIR  230 (290)
T ss_pred             CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCc----cCCHHHHHHHH
Confidence            33457899999999885 45788999999999999999999999888877777777666554432    46899999999


Q ss_pred             HccCCCCCCCC-----CHHHHhcCCCccCC
Q 043828          320 NMLDPNPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       320 ~~L~~dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      +||..||.+|+     +++++++||||+..
T Consensus       231 ~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~  260 (290)
T cd05580         231 NLLQVDLTKRLGNLKNGVNDIKNHPWFAGI  260 (290)
T ss_pred             HHccCCHHHccCcccCCHHHHHcCcccccC
Confidence            99999999999     99999999999764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=6.7e-43  Score=361.27  Aligned_cols=257  Identities=28%  Similarity=0.424  Sum_probs=213.7

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC-----e
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD-----A  156 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~-----~  156 (586)
                      +|++++.||+|+||.||+|.+..+|+.||+|++.... ........+.+|+.+++.+ +||||+++++++....     .
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~   78 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF-QNLVSCKRVFRELKMLCFF-KHDNVLSALDILQPPHIDPFEE   78 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc-cchHHHHHHHHHHHHHHhC-CCCCcCCHhheecCCCccccce
Confidence            4788999999999999999999999999999986532 2223346788999999999 8999999999998776     7


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|+||||+. ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++....
T Consensus        79 ~~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili---~~~~~~kL~Dfg~a~~~~  154 (372)
T cd07853          79 IYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV---NSNCVLKICDFGLARVEE  154 (372)
T ss_pred             EEEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEE---CCCCCEEeccccceeecc
Confidence            999999996 5888888877889999999999999999999999999999999999999   567899999999997654


Q ss_pred             CCC--ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhC--------------
Q 043828          237 PGE--QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRG--------------  298 (586)
Q Consensus       237 ~~~--~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~--------------  298 (586)
                      ...  ......+++.|+|||++.+  .++.++||||+||++|+|++|..||.+.+.......+...              
T Consensus       155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~  234 (372)
T cd07853         155 PDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACE  234 (372)
T ss_pred             cCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhH
Confidence            322  2234568999999999864  4789999999999999999999999887766555444321              


Q ss_pred             ---------ccCCCC-----CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          299 ---------KIDFER-----DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       299 ---------~~~~~~-----~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                               ....+.     ......+.++.+||.+||+.||.+|||+.|+|+||||+..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         235 GARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             HHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence                     111110     1123457899999999999999999999999999999874

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=1.4e-42  Score=369.21  Aligned_cols=257  Identities=30%  Similarity=0.480  Sum_probs=220.5

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC---
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD---  155 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~---  155 (586)
                      ..++|++.+.||+|+||+||+|++..+|+.||+|++...... ......+.+|+.++..+ +|+||+++++.+....   
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~~-~h~~iv~~~~~~~~~~~~~  107 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMS-EADKNRAQAEVCCLLNC-DFFSIVKCHEDFAKKDPRN  107 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCC-HHHHHHHHHHHHHHhcC-CCCcEEEeecceecccccC
Confidence            346999999999999999999999999999999999765432 33456788999999998 8999999988775432   


Q ss_pred             -----eEEEEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEE
Q 043828          156 -----AIYLVMELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKA  226 (586)
Q Consensus       156 -----~~~iv~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl  226 (586)
                           .+++||||+++|+|.+++..    ...+++..+..++.|++.||.|||+++|+||||||+|||+   +.++.+||
T Consensus       108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl---~~~~~vkL  184 (496)
T PTZ00283        108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILL---CSNGLVKL  184 (496)
T ss_pred             cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---eCCCCEEE
Confidence                 37899999999999998864    3468999999999999999999999999999999999999   56789999


Q ss_pred             eecccccccCCC---CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCC
Q 043828          227 IDFGLSIFFKPG---EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF  302 (586)
Q Consensus       227 ~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~  302 (586)
                      +|||+++.....   ......+||+.|+|||++.+ .|+.++|||||||++|+|++|..||...+.......+..+....
T Consensus       185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~  264 (496)
T PTZ00283        185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDP  264 (496)
T ss_pred             EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCC
Confidence            999998765432   22234679999999999974 68999999999999999999999999988888777777665432


Q ss_pred             CCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          303 ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       303 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                         ..+.+++.+.+||.+||+.||.+||++.++++|||++.
T Consensus       265 ---~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        265 ---LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL  302 (496)
T ss_pred             ---CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence               22468899999999999999999999999999999875

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=9.6e-43  Score=358.00  Aligned_cols=258  Identities=26%  Similarity=0.428  Sum_probs=209.5

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC---
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK---  154 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~---  154 (586)
                      .+.++|++.+.||+|+||.||+|.+..+++.+|+|++..... .......+.+|+.+++.+ +||||+++++++...   
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~   91 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKSL   91 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc-ChHHHHHHHHHHHHHHHh-CCCchhceeeeeeccccc
Confidence            356899999999999999999999999999999999875432 223346678899999999 899999999998644   


Q ss_pred             ---CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          155 ---DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       155 ---~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                         ..+|+||||+++ +|...+..  .+++..+..++.|++.||.|||++||+||||||+|||+   +.++.+||+|||+
T Consensus        92 ~~~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill---~~~~~~kl~Dfg~  165 (355)
T cd07874          92 EEFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL  165 (355)
T ss_pred             cccceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE---CCCCCEEEeeCcc
Confidence               357999999965 66666643  48899999999999999999999999999999999999   5678999999999


Q ss_pred             ccccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCc-----------
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK-----------  299 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~-----------  299 (586)
                      +.............||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.........+....           
T Consensus       166 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (355)
T cd07874         166 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL  245 (355)
T ss_pred             cccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence            987654444455679999999999864 68999999999999999999999998776544333222110           


Q ss_pred             -----------cC-----CC-----------CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          300 -----------ID-----FE-----------RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       300 -----------~~-----~~-----------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                                 ..     ++           .......+..+++||.+||..||.+|||+.|+|+||||..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~  316 (355)
T cd07874         246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINV  316 (355)
T ss_pred             cHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhc
Confidence                       00     00           0011224567899999999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.6e-42  Score=339.59  Aligned_cols=255  Identities=27%  Similarity=0.476  Sum_probs=216.9

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCC--hhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT--EIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ++|.+.+.||.|++|.||.|.+..+++.+|+|.+.......  ......+.+|+.+++++ +||||++++++++....+|
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~   80 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QHERIVQYYGCLRDDETLS   80 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEccCCeEE
Confidence            46999999999999999999999999999999987553322  22345788999999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      +|+||+++++|.+++.....+++..+..++.|++.||.|||+.||+||||+|+||++   +.++.++|+|||++......
T Consensus        81 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv---~~~~~~~l~dfg~~~~~~~~  157 (263)
T cd06625          81 IFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRLQTI  157 (263)
T ss_pred             EEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeecccceecccc
Confidence            999999999999999888889999999999999999999999999999999999999   56788999999998765432


Q ss_pred             Cce----ecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          239 EQF----CEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       239 ~~~----~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ...    ....|++.|+|||++.+ .++.++|||||||++|+|++|..||...........+........  ....++..
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  235 (263)
T cd06625         158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQ--LPSHVSPD  235 (263)
T ss_pred             ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCC--CCccCCHH
Confidence            211    23467889999999864 588999999999999999999999987666555444443332221  22467899


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      +.++|.+||..+|.+|||+.++++||||
T Consensus       236 ~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         236 ARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence            9999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=2.1e-42  Score=347.33  Aligned_cols=258  Identities=28%  Similarity=0.434  Sum_probs=213.9

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.+.||.|+||.||+|.+..+++.||+|.+.......  ....+.+|+.+++.+ +||||+++++++..+..+|+
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~l   81 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEG--APCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTL   81 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccC--chhHHHHHHHHHHhc-CCCCcceEEEEEecCCeEEE
Confidence            468999999999999999999999999999999987543222  234577899999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||++ ++|.+++.. ...+++..+..++.||+.||.|||+.||+||||||+||++   +.++.+||+|||++......
T Consensus        82 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~~~~  157 (301)
T cd07873          82 VFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIP  157 (301)
T ss_pred             EEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEE---CCCCcEEECcCcchhccCCC
Confidence            999997 588888765 3568999999999999999999999999999999999999   56789999999998764322


Q ss_pred             C-ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccC--------------
Q 043828          239 E-QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID--------------  301 (586)
Q Consensus       239 ~-~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--------------  301 (586)
                      . ......+++.|+|||++.+  .++.++|||||||++|+|++|.+||...+..+....+......              
T Consensus       158 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (301)
T cd07873         158 TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE  237 (301)
T ss_pred             CCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccc
Confidence            2 2233467899999999854  4788999999999999999999999888776655444331111              


Q ss_pred             -----CCC-------CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          302 -----FER-------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       302 -----~~~-------~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                           ++.       ...+.+++.+++||.+||+.||.+|||++|+|+||||+..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~  292 (301)
T cd07873         238 FKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCL  292 (301)
T ss_pred             ccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence                 000       0123578899999999999999999999999999999864

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.2e-43  Score=348.48  Aligned_cols=244  Identities=26%  Similarity=0.383  Sum_probs=209.7

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ..+++++.||+|-||.||.|.... ...||+|.+......    .+.+.+|+++|++| +|++||++++++..+..+|||
T Consensus       206 ~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m~----~~~f~~Ea~iMk~L-~H~~lV~l~gV~~~~~piyIV  279 (468)
T KOG0197|consen  206 EELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSMS----PEAFLREAQIMKKL-RHEKLVKLYGVCTKQEPIYIV  279 (468)
T ss_pred             HHHHHHHHhcCCccceEEEEEEcC-CCcccceEEeccccC----hhHHHHHHHHHHhC-cccCeEEEEEEEecCCceEEE
Confidence            346677899999999999997633 237999998765332    36788999999999 899999999999998899999


Q ss_pred             EeccCCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          161 MELCEGGELFDRIVN--KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||+.|+|.++|+.  ...+.......++.||++|++||+++++|||||-..||||   +++..+||+|||+|+....+
T Consensus       280 tE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV---~~~~~vKIsDFGLAr~~~d~  356 (468)
T KOG0197|consen  280 TEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILV---DEDLVVKISDFGLARLIGDD  356 (468)
T ss_pred             EEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheee---ccCceEEEcccccccccCCC
Confidence            999999999999987  5668999999999999999999999999999999999999   67789999999999955443


Q ss_pred             Cceeccc--CCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          239 EQFCEIV--GSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       239 ~~~~~~~--gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      ......-  -...|.|||++. +.++.+||||||||+||||+| |+.||.+.+..++++.+.++.- .+.+  +.+|.++
T Consensus       357 ~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyR-lp~P--~~CP~~v  433 (468)
T KOG0197|consen  357 EYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYR-LPRP--EGCPDEV  433 (468)
T ss_pred             ceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCc-CCCC--CCCCHHH
Confidence            3222211  245699999997 679999999999999999999 9999999999999999888753 3333  4689999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHh
Q 043828          315 KELVKNMLDPNPYNRLTLEEVL  336 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil  336 (586)
                      .+++..||..+|++|||++.+.
T Consensus       434 Y~lM~~CW~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  434 YELMKSCWHEDPEDRPTFETLR  455 (468)
T ss_pred             HHHHHHHhhCCcccCCCHHHHH
Confidence            9999999999999999998665

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=4e-42  Score=357.45  Aligned_cols=253  Identities=22%  Similarity=0.372  Sum_probs=205.5

Q ss_pred             cccCeeecceeccCCceEEEEEEEc--cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEI--ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      +..+|.+++.||.|+||.||+|...  .++..+|+|.+...        ....+|+.+++.+ +||||+++++++.....
T Consensus        90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~  160 (392)
T PHA03207         90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTI-SHRAIINLIHAYRWKST  160 (392)
T ss_pred             ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhc-CCCCccceeeeEeeCCE
Confidence            4468999999999999999999753  45678999987543        2346799999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|+|||++. ++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+   +..+.++|+|||++....
T Consensus       161 ~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill---~~~~~~~l~DfG~a~~~~  236 (392)
T PHA03207        161 VCMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL---DEPENAVLGDFGAACKLD  236 (392)
T ss_pred             EEEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---cCCCCEEEccCccccccC
Confidence            999999995 6888888777889999999999999999999999999999999999999   567899999999987654


Q ss_pred             CCC---ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCH---HHHHHHHHhC----ccCCCC-
Q 043828          237 PGE---QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETE---EGIAHAIIRG----KIDFER-  304 (586)
Q Consensus       237 ~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~~i~~~----~~~~~~-  304 (586)
                      ...   ......||+.|+|||++. ..|+.++|||||||++|+|++|..||.+...   ...+..+.+.    ...++. 
T Consensus       237 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~  316 (392)
T PHA03207        237 AHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQN  316 (392)
T ss_pred             cccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCc
Confidence            322   223467999999999987 4689999999999999999999999976432   1122222111    111110 


Q ss_pred             -----------------C--CC------CCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          305 -----------------D--PW------PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       305 -----------------~--~~------~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                       +  .+      ..++.++.+||.+||..||++|||+.++|.||||+..
T Consensus       317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~  381 (392)
T PHA03207        317 GSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKE  381 (392)
T ss_pred             cchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhcc
Confidence                             0  00      1346788999999999999999999999999999864

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.2e-44  Score=352.93  Aligned_cols=253  Identities=29%  Similarity=0.487  Sum_probs=219.4

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ..|.-++.||.|+||-||.|++..+.+.||||++.-..-....-..++..|+..|++| .|||++.+-++|-.+...|+|
T Consensus        26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l-~HPntieYkgCyLre~TaWLV  104 (948)
T KOG0577|consen   26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQL-RHPNTIEYKGCYLREHTAWLV  104 (948)
T ss_pred             HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhc-cCCCcccccceeeccchHHHH
Confidence            3577788999999999999999999999999999765544444567899999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      ||||-| +-.+++. .+.++.+-.++.|..+.+.||.|||+++.||||||..|||+   .+.+.|||+|||.|..+.+  
T Consensus       105 MEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILL---se~g~VKLaDFGSAsi~~P--  178 (948)
T KOG0577|consen  105 MEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILL---SEPGLVKLADFGSASIMAP--  178 (948)
T ss_pred             HHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEe---cCCCeeeeccccchhhcCc--
Confidence            999965 6666664 35679999999999999999999999999999999999999   6789999999999987654  


Q ss_pred             ceecccCCccccchhhh----hccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhC-ccCCCCCCCCCCCHHH
Q 043828          240 QFCEIVGSPYYMAPEVL----RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRG-KIDFERDPWPKVSKEA  314 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l----~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~  314 (586)
                       ..+++|||+|||||++    .+.|+-++||||||++..+|.-.++|++..+....+.-|..+ ...+..   +.+|..+
T Consensus       179 -AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs---~eWS~~F  254 (948)
T KOG0577|consen  179 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQS---NEWSDYF  254 (948)
T ss_pred             -hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCC---chhHHHH
Confidence             3468999999999987    368999999999999999999999998887766555444444 333333   4678999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +.|+..||++-|..|||.+++|.|+|+...
T Consensus       255 ~~Fvd~CLqKipqeRptse~ll~H~fv~R~  284 (948)
T KOG0577|consen  255 RNFVDSCLQKIPQERPTSEELLKHRFVLRE  284 (948)
T ss_pred             HHHHHHHHhhCcccCCcHHHHhhcchhccC
Confidence            999999999999999999999999999764

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=7.1e-44  Score=352.38  Aligned_cols=241  Identities=27%  Similarity=0.401  Sum_probs=209.7

Q ss_pred             eeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEe
Q 043828           83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVME  162 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E  162 (586)
                      ..-++-||.|+.|-||+|+.  .++.||||+++..          -..+|+-|++| +||||+.+.++|....++|||||
T Consensus       126 IsELeWlGSGaQGAVF~Grl--~netVAVKKV~el----------kETdIKHLRkL-kH~NII~FkGVCtqsPcyCIiME  192 (904)
T KOG4721|consen  126 ISELEWLGSGAQGAVFLGRL--HNETVAVKKVREL----------KETDIKHLRKL-KHPNIITFKGVCTQSPCYCIIME  192 (904)
T ss_pred             hhhhhhhccCcccceeeeec--cCceehhHHHhhh----------hhhhHHHHHhc-cCcceeeEeeeecCCceeEEeee
Confidence            33456799999999999964  6789999987422          23478889999 99999999999999999999999


Q ss_pred             ccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCcee
Q 043828          163 LCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC  242 (586)
Q Consensus       163 ~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~  242 (586)
                      ||..|.|...|+....++......|..+|+.|+.|||.+.|||||||.-||||   ..+..|||+|||.++.........
T Consensus       193 fCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLI---s~~d~VKIsDFGTS~e~~~~STkM  269 (904)
T KOG4721|consen  193 FCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILI---SYDDVVKISDFGTSKELSDKSTKM  269 (904)
T ss_pred             ccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEe---eccceEEeccccchHhhhhhhhhh
Confidence            99999999999999999999999999999999999999999999999999999   567789999999998877666667


Q ss_pred             cccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHc
Q 043828          243 EIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNM  321 (586)
Q Consensus       243 ~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~  321 (586)
                      .++||..|||||+++. ..+.|+|||||||||||||||..||..-+..+++--+-...+.++.+  ..++..++-||+.|
T Consensus       270 SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvP--stcP~GfklL~Kqc  347 (904)
T KOG4721|consen  270 SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVP--STCPDGFKLLLKQC  347 (904)
T ss_pred             hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCc--ccCchHHHHHHHHH
Confidence            8999999999999974 68999999999999999999999998776665544444444444333  46889999999999


Q ss_pred             cCCCCCCCCCHHHHhcCCCc
Q 043828          322 LDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       322 L~~dp~~Rps~~eil~hp~~  341 (586)
                      |+-.|.+||++.++|.|-=+
T Consensus       348 w~sKpRNRPSFrqil~HldI  367 (904)
T KOG4721|consen  348 WNSKPRNRPSFRQILLHLDI  367 (904)
T ss_pred             HhcCCCCCccHHHHHHHHhh
Confidence            99999999999999999433

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=4e-42  Score=339.05  Aligned_cols=254  Identities=30%  Similarity=0.481  Sum_probs=214.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++....   ......+.+|+.+++.+ +||||+++++++...+.+|+
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l-~h~~ii~~~~~~~~~~~~~l   83 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDC-KHSNIVAYFGSYLRRDKLWI   83 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEEE
Confidence            458999999999999999999999999999999986543   22335678899999999 99999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC-
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-  238 (586)
                      ||||+++++|.+++...+.+++..+..++.|++.||.|||+.||+|+||||+||++   +..+.++|+|||++...... 
T Consensus        84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili---~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd06645          84 CMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILL---TDNGHVKLADFGVSAQITATI  160 (267)
T ss_pred             EEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEECcceeeeEccCcc
Confidence            99999999999999888889999999999999999999999999999999999999   56788999999998755322 


Q ss_pred             CceecccCCccccchhhhh----ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCC-CCCCCCHH
Q 043828          239 EQFCEIVGSPYYMAPEVLR----RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD-PWPKVSKE  313 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~  313 (586)
                      .......|++.|+|||++.    +.++.++|||||||++|+|++|..||...................+.. ....++..
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (267)
T cd06645         161 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNS  240 (267)
T ss_pred             cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHH
Confidence            1223457899999999973    357889999999999999999999997665544433333333222211 11246788


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhcCCC
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLENPW  340 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~hp~  340 (586)
                      +.++|.+||..+|++|||++++++|||
T Consensus       241 ~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         241 FHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             HHHHHHHHccCCchhCcCHHHHhcCCC
Confidence            999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=2.8e-42  Score=349.04  Aligned_cols=249  Identities=27%  Similarity=0.460  Sum_probs=193.5

Q ss_pred             cceeccCCceEEEEEEEc--cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe--CCeEEEEE
Q 043828           86 GKELGRGEFGITHQCFEI--ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED--KDAIYLVM  161 (586)
Q Consensus        86 ~~~lG~G~~g~V~~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~--~~~~~iv~  161 (586)
                      +.+||+|+||+||+|++.  .+++.||+|.+.....     ...+.+|+.+++++ +||||+++++++..  +..+|+||
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~   79 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLREL-KHPNVISLQKVFLSHADRKVWLLF   79 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhc-CCCCCcceeeeEecCCCcEEEEEE
Confidence            468999999999999865  4678999999865432     24567899999999 89999999999854  46789999


Q ss_pred             eccCCCChHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecC-CCCCceEEeeccc
Q 043828          162 ELCEGGELFDRIVNK---------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADG-SENSQLKAIDFGL  231 (586)
Q Consensus       162 E~~~gg~L~~~l~~~---------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~-~~~~~vkl~Dfg~  231 (586)
                      ||+. ++|.+++...         ..+++..++.++.||+.||.|||++||+||||||+|||+... +..+.+||+|||+
T Consensus        80 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~  158 (317)
T cd07868          80 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF  158 (317)
T ss_pred             eccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence            9995 5887776532         248999999999999999999999999999999999999532 3567899999999


Q ss_pred             ccccCCCC----ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHH---------HHHHHHH
Q 043828          232 SIFFKPGE----QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEE---------GIAHAII  296 (586)
Q Consensus       232 a~~~~~~~----~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---------~~~~~i~  296 (586)
                      +.......    ......||+.|+|||++.+  .++.++||||+||++|+|++|.+||......         .....+.
T Consensus       159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~  238 (317)
T cd07868         159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF  238 (317)
T ss_pred             eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHH
Confidence            97654321    2335678999999999864  4889999999999999999999999653321         1111111


Q ss_pred             hCccC--------------------------CC--------CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          297 RGKID--------------------------FE--------RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       297 ~~~~~--------------------------~~--------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      .....                          +.        .......+..+.+||.+||+.||.+|||++|+|+||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         239 NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             HhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            10000                          00        00011235678999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=9.3e-42  Score=343.57  Aligned_cols=257  Identities=27%  Similarity=0.408  Sum_probs=213.9

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+....  .......+.+|+++++++ +||||+++++++..++.+|+|
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv   77 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHEC-NSPYIVGFYGAFYSDGEISIC   77 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCEEEEE
Confidence            36999999999999999999999999999999886542  222345688999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||+++++|.+++.....+++..+..++.|++.||.|||+ .+++||||||+||++   +.++.+||+|||++...... 
T Consensus        78 ~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~-  153 (308)
T cd06615          78 MEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDS-  153 (308)
T ss_pred             eeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEE---ecCCcEEEccCCCccccccc-
Confidence            9999999999999888889999999999999999999997 599999999999999   56778999999998765322 


Q ss_pred             ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCC----------------
Q 043828          240 QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF----------------  302 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~----------------  302 (586)
                      ......|++.|+|||.+.+ .++.++|||||||++|+|++|..||...+.......+.......                
T Consensus       154 ~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (308)
T cd06615         154 MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDS  233 (308)
T ss_pred             ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCc
Confidence            2234578999999999864 57889999999999999999999997655443332222111000                


Q ss_pred             ------------------CCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          303 ------------------ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       303 ------------------~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                        +..+...++.++++||.+||..+|++|||+.++++||||.+.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         234 PRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA  293 (308)
T ss_pred             cchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence                              011112367889999999999999999999999999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.4e-42  Score=355.13  Aligned_cols=258  Identities=24%  Similarity=0.441  Sum_probs=210.6

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC---
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK---  154 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~---  154 (586)
                      .+.++|++++.||.|+||+||+|.+..+++.||+|++..... .......+.+|+.+++.+ +||||+++++++...   
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~   89 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-SLIHARRTYRELRLLKHM-KHENVIGLLDVFTPATSI   89 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-hhHHHHHHHHHHHHHHhc-CCCchhhhhhhhcccccc
Confidence            455789999999999999999999999999999999865432 222345677899999999 899999999988643   


Q ss_pred             ---CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          155 ---DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       155 ---~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                         ..+|+++|++ +++|.+++. ...+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||+
T Consensus        90 ~~~~~~~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~---~~~~~~kl~Dfg~  164 (343)
T cd07878          90 ENFNEVYLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAV---NEDCELRILDFGL  164 (343)
T ss_pred             cccCcEEEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEE---CCCCCEEEcCCcc
Confidence               4579999998 778977664 4579999999999999999999999999999999999999   5678999999999


Q ss_pred             ccccCCCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccC--------
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID--------  301 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--------  301 (586)
                      +.....  ......||+.|+|||++.+  .++.++|||||||++|+|++|..||.+.+.......+......        
T Consensus       165 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (343)
T cd07878         165 ARQADD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKK  242 (343)
T ss_pred             ceecCC--CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            986543  2345678999999999864  5889999999999999999999999876655444433221100        


Q ss_pred             ---------------CCC----CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          302 ---------------FER----DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       302 ---------------~~~----~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                     .+.    ..+...++.+.+||.+||..||.+|||+.|+|+||||...
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~  304 (343)
T cd07878         243 ISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQY  304 (343)
T ss_pred             cchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhcc
Confidence                           000    0122456778999999999999999999999999999864

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.2e-43  Score=355.72  Aligned_cols=258  Identities=28%  Similarity=0.463  Sum_probs=218.2

Q ss_pred             cCeeecc-----eeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           81 DKYTFGK-----ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        81 ~~y~~~~-----~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      -+|+..+     +||+|.||+||.|++..|....|||-|....   .....-+..||.+.++| +|.|||++++.+..++
T Consensus       570 feYeyde~~ervVLGKGTYG~VYA~RD~~tqvrIaIKEIpekd---sr~~QPLhEEIaLH~~L-rHkNIVrYLGs~senG  645 (1226)
T KOG4279|consen  570 FEYEYDESNERVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKD---SREVQPLHEEIALHSTL-RHKNIVRYLGSVSENG  645 (1226)
T ss_pred             EEeeecCCCceEEeecCceeEEEeeccccceeEEEeeeccccc---chhhccHHHHHHHHHHH-hhHhHHHHhhccCCCC
Confidence            3555544     6999999999999999999999999986543   22345678899999999 8999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHh-CCCC--CHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          156 AIYLVMELCEGGELFDRIVN-KGHY--TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~-~~~~--~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                      .+-|.||-++||+|.++++. .+++  .+..+..+.+||++||.|||++.|||||||-+|||++  ...|.+||+|||.+
T Consensus       646 f~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN--TySGvlKISDFGTs  723 (1226)
T KOG4279|consen  646 FFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN--TYSGVLKISDFGTS  723 (1226)
T ss_pred             eEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe--eccceEEecccccc
Confidence            99999999999999999986 4777  8999999999999999999999999999999999997  57899999999999


Q ss_pred             cccCCC-CceecccCCccccchhhhh---ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCC
Q 043828          233 IFFKPG-EQFCEIVGSPYYMAPEVLR---RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP  308 (586)
Q Consensus       233 ~~~~~~-~~~~~~~gt~~y~aPE~l~---~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  308 (586)
                      +.+..- .-..++.||..|||||++.   +.|+.++|||||||++.||.||++||....... .....-+.+...++...
T Consensus       724 KRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq-AAMFkVGmyKvHP~iPe  802 (1226)
T KOG4279|consen  724 KRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ-AAMFKVGMYKVHPPIPE  802 (1226)
T ss_pred             hhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh-HhhhhhcceecCCCCcH
Confidence            876543 3344678999999999996   369999999999999999999999997654322 11222344444444445


Q ss_pred             CCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          309 KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      .++.+++.||.+|+.+||..||+|.++|..||++..+
T Consensus       803 elsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~  839 (1226)
T KOG4279|consen  803 ELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNN  839 (1226)
T ss_pred             HHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCC
Confidence            7899999999999999999999999999999998653

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=1.4e-41  Score=341.89  Aligned_cols=259  Identities=29%  Similarity=0.476  Sum_probs=223.3

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|+||.||++.+..+++.||+|.+.............+.+|+.+++.+ +||||+++++.+..++.+|+|
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv   79 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFA-ENPFVVSMFCSFETKRHLCMV   79 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEecCCEEEEE
Confidence            3689999999999999999999999999999998766433333456788999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-  239 (586)
                      |||++|++|.+++...+.+++..+..++.|++.||.|||+++++||||||+||++   +..+.++|+|||++....... 
T Consensus        80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll---~~~~~~~l~dfg~~~~~~~~~~  156 (305)
T cd05609          80 MEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLI---TSMGHIKLTDFGLSKIGLMSLT  156 (305)
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEE---CCCCCEEEeeCCCccccCcCcc
Confidence            9999999999999888889999999999999999999999999999999999999   567899999999886421100 


Q ss_pred             ---------------ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCC
Q 043828          240 ---------------QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE  303 (586)
Q Consensus       240 ---------------~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~  303 (586)
                                     ......|+..|+|||.+. ..++.++|||||||++|+|++|..||.+.+..+....+..+....+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  236 (305)
T cd05609         157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWP  236 (305)
T ss_pred             ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCC
Confidence                           011245788999999875 4688999999999999999999999998888887877777665554


Q ss_pred             CCCCCCCCHHHHHHHHHccCCCCCCCCC---HHHHhcCCCccCC
Q 043828          304 RDPWPKVSKEAKELVKNMLDPNPYNRLT---LEEVLENPWIKND  344 (586)
Q Consensus       304 ~~~~~~~~~~~~~li~~~L~~dp~~Rps---~~eil~hp~~~~~  344 (586)
                      .... .++..+.++|.+||+.||.+||+   +.++|+||||...
T Consensus       237 ~~~~-~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~  279 (305)
T cd05609         237 EGDE-ALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL  279 (305)
T ss_pred             Cccc-cCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence            4332 57899999999999999999997   7999999999764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-41  Score=344.59  Aligned_cols=259  Identities=29%  Similarity=0.512  Sum_probs=222.7

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|++|.||+|.+..+++.||+|.+.+...........+..|+.+++.+ +||||+++++.+......|+|
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv   79 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL-DHPFLPTLYASFQTETYLCLV   79 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhC-CCCCchhheeeeecCCEEEEE
Confidence            3799999999999999999999989999999999876554434456788999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          161 MELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      |||+.|++|.+++...  ..+++..+..++.|++.||.|||+.|++||||||+||++   +.++.++|+|||++......
T Consensus        80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~~~~~~  156 (316)
T cd05574          80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILL---HESGHIMLSDFDLSKQSDVE  156 (316)
T ss_pred             EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEE---cCCCCEEEeecchhhccccc
Confidence            9999999999988753  568999999999999999999999999999999999999   56789999999998654321


Q ss_pred             C------------------------------ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCC
Q 043828          239 E------------------------------QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAET  287 (586)
Q Consensus       239 ~------------------------------~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~  287 (586)
                      .                              ......|+..|+|||++.+ .++.++|||||||++|+|++|..||.+.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~  236 (316)
T cd05574         157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN  236 (316)
T ss_pred             ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence            1                              1113468899999999864 57889999999999999999999998888


Q ss_pred             HHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCC----HHHHhcCCCccCCC
Q 043828          288 EEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLT----LEEVLENPWIKNDN  345 (586)
Q Consensus       288 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps----~~eil~hp~~~~~~  345 (586)
                      .......+......++..  ..++..+.++|.+||..||.+|||    ++++|.||||+...
T Consensus       237 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~  296 (316)
T cd05574         237 RDETFSNILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVN  296 (316)
T ss_pred             hHHHHHHHhcCCccCCCc--cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCC
Confidence            777777666555444332  237899999999999999999999    99999999998743

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=1.2e-41  Score=339.02  Aligned_cols=254  Identities=28%  Similarity=0.438  Sum_probs=208.4

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|++.+.||.|++|.||+|++..+|..||+|++...... ......+.+|+.+++.+ +||||+++++++.++..+|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~   78 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE-EGVPSTAIREISLLKEL-QHPNIVCLQDVLMQESRLYLIF   78 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEecccccc-CCchHHHHHHHHHHHhc-CCCCEeeeEEEEeeCCeEEEEE
Confidence            589999999999999999999999999999998654322 22345778899999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          162 ELCEGGELFDRIVNK---GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       162 E~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||++ ++|.+++...   ..+++..++.++.||+.||.|||++||+||||||+||++   +.++.++|+|||++......
T Consensus        79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~  154 (285)
T cd07861          79 EFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLI---DNKGVIKLADFGLARAFGIP  154 (285)
T ss_pred             ecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEE---cCCCcEEECcccceeecCCC
Confidence            9997 5888877542   468999999999999999999999999999999999999   56789999999998755322


Q ss_pred             C-ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCC-------------
Q 043828          239 E-QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF-------------  302 (586)
Q Consensus       239 ~-~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-------------  302 (586)
                      . ......+++.|+|||++.+  .++.++|||||||++|+|++|.+||.+.+.......+.......             
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (285)
T cd07861         155 VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPD  234 (285)
T ss_pred             cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHH
Confidence            1 2233467899999998853  47889999999999999999999998766544333222111000             


Q ss_pred             ------------CCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          303 ------------ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       303 ------------~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                                  ....+..+++++.+||.+||..||.+|||+.++++||||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         235 YKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             HHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence                        001123578899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=1.5e-41  Score=334.87  Aligned_cols=255  Identities=31%  Similarity=0.523  Sum_probs=216.9

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++++.||.|+||+||+|....++..+|+|++.......  ....+.+|+.+++.+ +||||+++++.+.....+|+|
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv   77 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQC-NHPNVVKYYTSFVVGDELWLV   77 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhc-CCCCEEEEEEEEeeCCEEEEE
Confidence            47999999999999999999988899999999986554322  457889999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          161 MELCEGGELFDRIVNK---GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |||+++++|.+++...   ..+++..+..++.|++.||.|||+.||+||||+|+||++   +.++.++|+|||++.....
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~---~~~~~~~l~df~~~~~~~~  154 (267)
T cd06610          78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILL---GEDGSVKIADFGVSASLAD  154 (267)
T ss_pred             EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE---cCCCCEEEcccchHHHhcc
Confidence            9999999999998763   458999999999999999999999999999999999999   5567899999999876644


Q ss_pred             CCce-----ecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccC-CCCC-CCC
Q 043828          238 GEQF-----CEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID-FERD-PWP  308 (586)
Q Consensus       238 ~~~~-----~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~-~~~~-~~~  308 (586)
                      ....     ....|+..|+|||++..  .++.++|+|||||++|+|++|..||...+.......+...... +... .+.
T Consensus       155 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (267)
T cd06610         155 GGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYK  234 (267)
T ss_pred             CccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccc
Confidence            3221     33468999999999864  5888999999999999999999999887766555555444322 1111 124


Q ss_pred             CCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          309 KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      .+++.+.+++.+||..||.+|||+.+++.||||
T Consensus       235 ~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         235 KYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             cccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence            678999999999999999999999999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=7e-42  Score=337.33  Aligned_cols=255  Identities=28%  Similarity=0.428  Sum_probs=212.8

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ...+|++.+.||+|+||.||+|++..+++.+|+|++.....   .....+.+|+.+++++ +||||+++++++..+..+|
T Consensus         7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~~e~~~l~~~-~h~~ii~~~~~~~~~~~~~   82 (267)
T cd06646           7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG---DDFSLIQQEIFMVKEC-KHCNIVAYFGSYLSREKLW   82 (267)
T ss_pred             chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc---chHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCEEE
Confidence            34689999999999999999999999999999999865422   2335678899999999 9999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      +||||+++++|.+++.....+++..+..++.|++.||.|||+.||+||||+|+||++   +.++.++|+|||++......
T Consensus        83 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill---~~~~~~~l~dfg~~~~~~~~  159 (267)
T cd06646          83 ICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILL---TDNGDVKLADFGVAAKITAT  159 (267)
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCCEEECcCccceeeccc
Confidence            999999999999999888889999999999999999999999999999999999999   56778999999998765422


Q ss_pred             C-ceecccCCccccchhhhh----ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCC-CCCCCCH
Q 043828          239 E-QFCEIVGSPYYMAPEVLR----RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD-PWPKVSK  312 (586)
Q Consensus       239 ~-~~~~~~gt~~y~aPE~l~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~  312 (586)
                      . ......|++.|+|||.+.    ..++.++||||+||++|+|++|..||...........+.......+.. ....++.
T Consensus       160 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd06646         160 IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSS  239 (267)
T ss_pred             ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCH
Confidence            2 223456889999999873    347789999999999999999999997655443333322222222111 1134688


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhcCCC
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLENPW  340 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~hp~  340 (586)
                      .+.+||.+||..+|++|||++++|+|+|
T Consensus       240 ~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         240 TFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             HHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence            9999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-41  Score=334.47  Aligned_cols=253  Identities=31%  Similarity=0.494  Sum_probs=215.7

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG  166 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~g  166 (586)
                      +.||.|+||.||+|.+..+|+.||+|.+.+...........+..|..++....+||||+++++++...+.+|+|+||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            57999999999999999999999999987654332222334555666555555899999999999999999999999999


Q ss_pred             CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCceecccC
Q 043828          167 GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVG  246 (586)
Q Consensus       167 g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g  246 (586)
                      ++|.+++...+.+++..+..++.|++.||.|||+.+++||||+|+||++   +..+.++|+|||++.....   .....|
T Consensus        82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~---~~~~~~  155 (260)
T cd05611          82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLI---DQTGHLKLTDFGLSRNGLE---NKKFVG  155 (260)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCcEEEeecccceeccc---cccCCC
Confidence            9999999888889999999999999999999999999999999999999   5678899999998875432   223468


Q ss_pred             Cccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCC
Q 043828          247 SPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPN  325 (586)
Q Consensus       247 t~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  325 (586)
                      ++.|+|||.+.+ .++.++||||+|+++|+|++|..||...+.......+......++......+++.+.++|.+||+.+
T Consensus       156 ~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~  235 (260)
T cd05611         156 TPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMD  235 (260)
T ss_pred             CcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCC
Confidence            899999999864 4788999999999999999999999988888877777776666655555578999999999999999


Q ss_pred             CCCCC---CHHHHhcCCCccCCC
Q 043828          326 PYNRL---TLEEVLENPWIKNDN  345 (586)
Q Consensus       326 p~~Rp---s~~eil~hp~~~~~~  345 (586)
                      |++||   +++|++.||||++..
T Consensus       236 p~~R~~~~~~~~~l~~~~~~~~~  258 (260)
T cd05611         236 PAKRLGANGYQEIKSHPFFKSIN  258 (260)
T ss_pred             HHHccCCCcHHHHHcChHhhcCC
Confidence            99999   557999999998643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=1.8e-41  Score=337.97  Aligned_cols=256  Identities=30%  Similarity=0.543  Sum_probs=213.5

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|++|.||+|.+..+|+.||+|++...... ......+.+|+.+++++ +||||+++++++.....+++|
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~v   78 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD-PVIKKIALREIRMLKQL-KHPNLVNLIEVFRRKRKLHLV   78 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccC-ccccHHHHHHHHHHHhC-CCCCEeeeeeEEeeCCEEEEE
Confidence            4799999999999999999999989999999998754322 12235678899999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-  239 (586)
                      |||++++.|..++.....+++..+..++.||+.||.|||+.||+||||||+||++   +.++.++|+|||++....... 
T Consensus        79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~~~  155 (286)
T cd07847          79 FEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILI---TKQGQIKLCDFGFARILTGPGD  155 (286)
T ss_pred             EeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEE---cCCCcEEECccccceecCCCcc
Confidence            9999998888777766779999999999999999999999999999999999999   567789999999998765433 


Q ss_pred             ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc-----------------
Q 043828          240 QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI-----------------  300 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~-----------------  300 (586)
                      ......++..|+|||++.+  .++.++||||+||++|+|++|.+||.+.+..+....+.....                 
T Consensus       156 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (286)
T cd07847         156 DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFK  235 (286)
T ss_pred             cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccc
Confidence            2334567889999999853  478899999999999999999999987766544443322100                 


Q ss_pred             --CCCC--------CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          301 --DFER--------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       301 --~~~~--------~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                        ..+.        ..++.++..+.+||.+||+++|++|||+.|++.||||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         236 GLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             cccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence              0011        0124568889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=2.2e-41  Score=338.83  Aligned_cols=259  Identities=30%  Similarity=0.525  Sum_probs=218.2

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      +....+|++.+.||+|+||.||+|++..+++.+|+|.+......   ....+.+|+.+++.+ +||||+++++.+.....
T Consensus        16 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~---~~~~~~~e~~~l~~~-~h~~v~~~~~~~~~~~~   91 (296)
T cd06654          16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMREN-KNPNIVNYLDSYLVGDE   91 (296)
T ss_pred             CCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc---hHHHHHHHHHHHHhC-CCCCEeeEEEEEEeCCE
Confidence            44557999999999999999999999999999999998765432   236788999999998 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|+||||+++++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+||++   +.++.++|+|||++....
T Consensus        92 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill---~~~~~~kl~dfg~~~~~~  167 (296)
T cd06654          92 LWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQIT  167 (296)
T ss_pred             EEEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---cCCCCEEECccccchhcc
Confidence            9999999999999998764 468999999999999999999999999999999999999   567789999999987654


Q ss_pred             CCC-ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          237 PGE-QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       237 ~~~-~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      ... ......|++.|+|||.+.+ .++.++|||||||++|+|++|..||...........+..... ........++..+
T Consensus       168 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  246 (296)
T cd06654         168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PELQNPEKLSAIF  246 (296)
T ss_pred             ccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCC-CCCCCccccCHHH
Confidence            332 2234578999999999864 578899999999999999999999988776544433332221 1112224678899


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .+||.+||..+|.+|||+.+++.||||...
T Consensus       247 ~~li~~~l~~~p~~Rpt~~eil~~~~~~~~  276 (296)
T cd06654         247 RDFLNRCLDMDVEKRGSAKELLQHQFLKIA  276 (296)
T ss_pred             HHHHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence            999999999999999999999999999854

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=1.4e-41  Score=336.10  Aligned_cols=253  Identities=29%  Similarity=0.493  Sum_probs=211.6

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC-----
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK-----  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~-----  154 (586)
                      .+.|++.+.||+|+||.||+|.+..+++.+|+|++....    .....+.+|+.+++++.+||||+++++++...     
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   80 (272)
T cd06637           5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM   80 (272)
T ss_pred             hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence            357999999999999999999999999999999986542    22357888999999987799999999998753     


Q ss_pred             -CeEEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          155 -DAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       155 -~~~~iv~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                       ..+|+||||+++++|.+++...  ..+++..+..++.|++.||.|||+++|+||||||+||++   +.++.++|+|||+
T Consensus        81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili---~~~~~~~l~Dfg~  157 (272)
T cd06637          81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGV  157 (272)
T ss_pred             CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEE---CCCCCEEEccCCC
Confidence             4689999999999999988763  468999999999999999999999999999999999999   5678899999999


Q ss_pred             ccccCCC-CceecccCCccccchhhhh------ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCC
Q 043828          232 SIFFKPG-EQFCEIVGSPYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER  304 (586)
Q Consensus       232 a~~~~~~-~~~~~~~gt~~y~aPE~l~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~  304 (586)
                      +...... .......|++.|+|||++.      ..++.++||||+||++|+|++|..||...........+....  ...
T Consensus       158 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~--~~~  235 (272)
T cd06637         158 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP--APR  235 (272)
T ss_pred             ceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCC--CCC
Confidence            8765432 2233467899999999984      247889999999999999999999997766554444333322  122


Q ss_pred             CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          305 DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       305 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      .....++..+.+||.+||..+|.+|||+.++++||||
T Consensus       236 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         236 LKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             CCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            2234678899999999999999999999999999998

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=8.4e-42  Score=350.60  Aligned_cols=249  Identities=23%  Similarity=0.340  Sum_probs=199.8

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ..|++++.||+|+||.||+|++..++..||+|+..+.         ....|+.+++++ +||||+++++++......++|
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv  135 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNV-NHPSVIRMKDTLVSGAITCMV  135 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhC-CCCCCcChhheEEeCCeeEEE
Confidence            4799999999999999999999999999999975332         235689999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||+. ++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+   +..+.+||+|||++.......
T Consensus       136 ~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~~~~~  211 (357)
T PHA03209        136 LPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI---NDVDQVCIGDLGAAQFPVVAP  211 (357)
T ss_pred             EEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEecCccccccccCc
Confidence            99995 588888765 4568999999999999999999999999999999999999   567889999999987644333


Q ss_pred             ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCH---H-------HHHHHHHhC-c---cCCCC
Q 043828          240 QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETE---E-------GIAHAIIRG-K---IDFER  304 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~-------~~~~~i~~~-~---~~~~~  304 (586)
                      ......||+.|+|||++. ..++.++|||||||++|+|+++..|+.....   .       ..+..+... .   ..++.
T Consensus       212 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  291 (357)
T PHA03209        212 AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPR  291 (357)
T ss_pred             ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCC
Confidence            344567999999999986 4689999999999999999986555432211   0       111111111 0   00110


Q ss_pred             --------------------------CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          305 --------------------------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       305 --------------------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                                                .....++..+.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        292 DPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             CCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence                                      001245677888999999999999999999999999985

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=2.3e-41  Score=333.64  Aligned_cols=253  Identities=27%  Similarity=0.470  Sum_probs=214.2

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCCh------hcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE------IDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~------~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      +|.+...||.|++|.||+|.+..+++.+|+|.+........      ...+.+.+|+.+++++ +||||+++++++....
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~   79 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-QHENIVQYLGSSLDAD   79 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCC
Confidence            47889999999999999999988999999998865533221      2235688999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      ..++||||+++++|.+++...+.+++..+..++.|++.||.|||++|++||||+|+||++   +.++.++|+|||++...
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~---~~~~~~~l~dfg~~~~~  156 (267)
T cd06628          80 HLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILV---DNKGGIKISDFGISKKL  156 (267)
T ss_pred             ccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEE---cCCCCEEecccCCCccc
Confidence            999999999999999999888889999999999999999999999999999999999999   56789999999998766


Q ss_pred             CCCC-------ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCC
Q 043828          236 KPGE-------QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW  307 (586)
Q Consensus       236 ~~~~-------~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  307 (586)
                      ....       ......|++.|+|||.+. ..++.++||||+||++|+|++|..||...+.......+.....   ....
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~  233 (267)
T cd06628         157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENAS---PEIP  233 (267)
T ss_pred             ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCC---CcCC
Confidence            4211       112345889999999986 4578899999999999999999999987665554444433211   1122


Q ss_pred             CCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       308 ~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      ..++..+.++|.+||++||.+||++.++++||||
T Consensus       234 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         234 SNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             cccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence            3578999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-42  Score=351.65  Aligned_cols=247  Identities=36%  Similarity=0.564  Sum_probs=215.6

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      ..+.+.|.+...+|.|+|+.|..|.+..+++.+++|++.+..       ....+|+.++....+||||+++.+.+.+..+
T Consensus       318 ~~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~  390 (612)
T KOG0603|consen  318 APFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKE  390 (612)
T ss_pred             CCcchhhccccccCCCCccceeeeeccccccchhheeccccc-------cccccccchhhhhcCCCcceeecceecCCce
Confidence            356789999999999999999999999999999999997763       2235678788888899999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      .|+|||++.|+-|.+.+....... ..+..|+.+|+.|+.|||.+|||||||||+|||+.  +..++++|+|||.+....
T Consensus       391 ~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~~~~  467 (612)
T KOG0603|consen  391 IYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWSELE  467 (612)
T ss_pred             eeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCcEEEEEechhhhCc
Confidence            999999999999988887766555 77888999999999999999999999999999995  367889999999998876


Q ss_pred             CCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHH-HHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          237 PGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      ..  ..+.+-|..|.|||++. ..|+.++||||||++||+||+|+.||...... ++...+..+.+.      ..+|..+
T Consensus       468 ~~--~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s------~~vS~~A  539 (612)
T KOG0603|consen  468 RS--CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS------ECVSDEA  539 (612)
T ss_pred             hh--hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc------cccCHHH
Confidence            54  34446688999999997 47999999999999999999999999877665 444454444433      4689999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      ++||..||+.||.+||++++++.||||
T Consensus       540 KdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  540 KDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             HHHHHHhccCChhhCcChhhhccCcch
Confidence            999999999999999999999999999

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=1.8e-41  Score=336.80  Aligned_cols=241  Identities=18%  Similarity=0.220  Sum_probs=207.8

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe----CCeEEEEEe
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED----KDAIYLVME  162 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~----~~~~~iv~E  162 (586)
                      ..||+|++|.||+|..  +|+.||+|++.+.........+.+.+|+.+|+++ +||||+++++++.+    ...+++|||
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~~~~~~~~~~lv~E  102 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRI-DSNNILKIYGFIIDIVDDLPRLSLILE  102 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhc-CCCCEEEEeeeEEecccCCCceEEEEE
Confidence            4689999999999976  7899999999766443333356788999999999 89999999999876    357899999


Q ss_pred             ccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeecCCCCCceEEeecccccccCCCCce
Q 043828          163 LCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN-GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF  241 (586)
Q Consensus       163 ~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~  241 (586)
                      ||++|+|.+++.....+++.....++.|++.||.|||+. +++||||||+||++   +.++.+||+|||++.......  
T Consensus       103 y~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill---~~~~~~kl~dfg~~~~~~~~~--  177 (283)
T PHA02988        103 YCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLV---TENYKLKIICHGLEKILSSPP--  177 (283)
T ss_pred             eCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEE---CCCCcEEEcccchHhhhcccc--
Confidence            999999999998888899999999999999999999984 99999999999999   567899999999988654322  


Q ss_pred             ecccCCccccchhhhhc---cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHH
Q 043828          242 CEIVGSPYYMAPEVLRR---NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV  318 (586)
Q Consensus       242 ~~~~gt~~y~aPE~l~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  318 (586)
                      ....|++.|+|||++.+   .++.++|||||||++|+|++|..||.+.+..++...+......++.+  ...+..+++||
T Consensus       178 ~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~l~~li  255 (283)
T PHA02988        178 FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLP--LDCPLEIKCIV  255 (283)
T ss_pred             ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC--CcCcHHHHHHH
Confidence            24568999999999863   68999999999999999999999999888888777776555444322  25789999999


Q ss_pred             HHccCCCCCCCCCHHHHhc
Q 043828          319 KNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       319 ~~~L~~dp~~Rps~~eil~  337 (586)
                      .+||+.||.+|||+.++++
T Consensus       256 ~~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        256 EACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             HHHhcCCcccCcCHHHHHH
Confidence            9999999999999999986

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-41  Score=337.19  Aligned_cols=256  Identities=28%  Similarity=0.489  Sum_probs=218.8

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||.|++|.||+|.+..+++.+|+|.+.....  ......+.+|+.+++.+ +||||+++++++.++..+|+|
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v   77 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA--EDEIEDIQQEIQFLSQC-RSPYITKYYGSFLKGSKLWII   77 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc--chHHHHHHHHHHHHHHc-CCCCeeeeeEEEEECCeEEEE
Confidence            378999999999999999999999999999999875532  22346788999999999 799999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC-C
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-E  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~  239 (586)
                      +||+++++|.+++... .+++..+..++.|++.||.|||+.+++||||+|+||++   +.++.++|+|||++...... .
T Consensus        78 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~~~  153 (274)
T cd06609          78 MEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILL---SEEGDVKLADFGVSGQLTSTMS  153 (274)
T ss_pred             EEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEcccccceeeccccc
Confidence            9999999999988765 78999999999999999999999999999999999999   56789999999999876543 2


Q ss_pred             ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHH
Q 043828          240 QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV  318 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  318 (586)
                      ......|++.|+|||.+.+ .++.++|||||||++|+|++|..||...+.......+.......  .....++..+.+++
T Consensus       154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l  231 (274)
T cd06609         154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPS--LEGNKFSKPFKDFV  231 (274)
T ss_pred             ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCC--CcccccCHHHHHHH
Confidence            2334578899999999864 58899999999999999999999998777666555555442211  11122788999999


Q ss_pred             HHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          319 KNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       319 ~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      .+||..+|++|||++++++||||++..
T Consensus       232 ~~~l~~~p~~Rpt~~~il~~~~~~~~~  258 (274)
T cd06609         232 SLCLNKDPKERPSAKELLKHKFIKKAK  258 (274)
T ss_pred             HHHhhCChhhCcCHHHHhhChhhcCCC
Confidence            999999999999999999999998743

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=6e-42  Score=341.03  Aligned_cols=254  Identities=30%  Similarity=0.485  Sum_probs=207.2

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|++.+.||.|+||.||+|++..+|+.+|+|++...... ......+.+|+.+++++ +||||+++++++.+...+|+|+
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~-~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~lv~   78 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKEL-KHKNIVRLYDVLHSDKKLTLVF   78 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccccc-ccCccchhHHHHHHHhc-CCCCeeeHHHHhccCCceEEEE
Confidence            589999999999999999999999999999999764322 22235677899999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-
Q 043828          162 ELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-  239 (586)
Q Consensus       162 E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-  239 (586)
                      ||+. ++|.+++.. ...+++..++.++.||+.||.|||+++|+||||||+||++   +..+.+||+|||++....... 
T Consensus        79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~---~~~~~~~l~dfg~~~~~~~~~~  154 (284)
T cd07839          79 EYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLI---NKNGELKLADFGLARAFGIPVR  154 (284)
T ss_pred             ecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---cCCCcEEECccchhhccCCCCC
Confidence            9997 478777765 5679999999999999999999999999999999999999   567899999999987654322 


Q ss_pred             ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCC-CCCHHHHHHHHHhCcc--------------C-
Q 043828          240 QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFW-AETEEGIAHAIIRGKI--------------D-  301 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~-~~~~~~~~~~i~~~~~--------------~-  301 (586)
                      ......+++.|+|||++.+  .++.++|||||||++|+|++|..||. +.+..+....+.+...              . 
T Consensus       155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
T cd07839         155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY  234 (284)
T ss_pred             CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc
Confidence            2234567899999999864  47889999999999999999988854 4444444433322110              0 


Q ss_pred             --CC--------CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          302 --FE--------RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       302 --~~--------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                        ++        ....+.+++.+.+||.+||..||.+|||+++++.||||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence              00        01123578899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-41  Score=337.37  Aligned_cols=257  Identities=31%  Similarity=0.488  Sum_probs=218.7

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.+.||.|+||.||+|.+..++..+|+|.+...   .....+.+.+|+.+++++ +||||+++++++..+..+|+
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   79 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSEC-KHPNIVGLYEAYFYENKLWI   79 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhC-CCCceeEEEEEEecCCeEEE
Confidence            36799999999999999999999889999999998643   233446788999999999 79999999999999999999


Q ss_pred             EEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||+++++|.+++... ..+++..++.++.|++.||.|||+.+|+|+||+|+||++   +.++.++|+|||++......
T Consensus        80 v~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili---~~~~~~~l~d~g~~~~~~~~  156 (280)
T cd06611          80 LIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILL---TLDGDVKLADFGVSAKNKST  156 (280)
T ss_pred             EeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---CCCCCEEEccCccchhhccc
Confidence            99999999999988763 569999999999999999999999999999999999999   56789999999988654322


Q ss_pred             -CceecccCCccccchhhhh------ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCC
Q 043828          239 -EQFCEIVGSPYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS  311 (586)
Q Consensus       239 -~~~~~~~gt~~y~aPE~l~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  311 (586)
                       .......|++.|+|||++.      ..++.++|||||||++|+|++|.+||...........+........ .....++
T Consensus       157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  235 (280)
T cd06611         157 LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTL-DQPSKWS  235 (280)
T ss_pred             ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCc-CCcccCC
Confidence             2223456899999999974      2367789999999999999999999988877666666655433211 1123578


Q ss_pred             HHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       312 ~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ..+.++|.+||..+|.+||++.++++||||.+.
T Consensus       236 ~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~  268 (280)
T cd06611         236 SSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ  268 (280)
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence            999999999999999999999999999999864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=4.3e-43  Score=323.93  Aligned_cols=264  Identities=31%  Similarity=0.492  Sum_probs=210.7

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCC----cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe-
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETG----ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED-  153 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~----~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~-  153 (586)
                      .+..|++++.||+|+||.||+|+.+.++    ..||+|++..+.-..... ...-+|+.+++.| +||||+.+..+|.. 
T Consensus        22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS-~SAcREiaL~REl-~h~nvi~Lv~Vfl~~   99 (438)
T KOG0666|consen   22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGIS-MSACREIALLREL-KHPNVISLVKVFLSH   99 (438)
T ss_pred             HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcC-HHHHHHHHHHHHh-cCCcchhHHHHHhcc
Confidence            4568999999999999999999765443    268999987665444433 3556799999999 89999999998876 


Q ss_pred             CCeEEEEEeccCCCChHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEee-cCCCCCceEEe
Q 043828          154 KDAIYLVMELCEGGELFDRIVN-----KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA-DGSENSQLKAI  227 (586)
Q Consensus       154 ~~~~~iv~E~~~gg~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~-~~~~~~~vkl~  227 (586)
                      +..+|+++||.+. +|...|+-     ...++...+..|++||+.|+.|||++.|+||||||.|||+. ++.+.|.|||+
T Consensus       100 d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIa  178 (438)
T KOG0666|consen  100 DKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIA  178 (438)
T ss_pred             CceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEee
Confidence            8899999999976 88887753     24589999999999999999999999999999999999995 44667999999


Q ss_pred             ecccccccCCC----CceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHH---------HHH
Q 043828          228 DFGLSIFFKPG----EQFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEE---------GIA  292 (586)
Q Consensus       228 Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---------~~~  292 (586)
                      |||+++.+...    ......+.|.+|+|||.+-  ..|+.+.|||++|||+.||++-.+.|.+....         ..+
T Consensus       179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl  258 (438)
T KOG0666|consen  179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL  258 (438)
T ss_pred             cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence            99999987533    1234567899999999985  47999999999999999999999888664221         233


Q ss_pred             HHHHhCccCCCCCCCCC---------------------------------CCHHHHHHHHHccCCCCCCCCCHHHHhcCC
Q 043828          293 HAIIRGKIDFERDPWPK---------------------------------VSKEAKELVKNMLDPNPYNRLTLEEVLENP  339 (586)
Q Consensus       293 ~~i~~~~~~~~~~~~~~---------------------------------~~~~~~~li~~~L~~dp~~Rps~~eil~hp  339 (586)
                      ..|..-........||.                                 -++...+|+.+||+.||.+|.|++++|+|+
T Consensus       259 ~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~  338 (438)
T KOG0666|consen  259 DRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP  338 (438)
T ss_pred             HHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence            33333222222222221                                 244588999999999999999999999999


Q ss_pred             CccCCC
Q 043828          340 WIKNDN  345 (586)
Q Consensus       340 ~~~~~~  345 (586)
                      ||....
T Consensus       339 yF~~d~  344 (438)
T KOG0666|consen  339 YFTEDP  344 (438)
T ss_pred             ccccCC
Confidence            998753

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.7e-43  Score=332.74  Aligned_cols=259  Identities=29%  Similarity=0.520  Sum_probs=236.2

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      .+|.++.+||+|+||.|.++..+.+.+.||||++++..+....+.+.-..|-.+|.-..+-|.+++++.+|+.-+.+|+|
T Consensus       349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV  428 (683)
T KOG0696|consen  349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV  428 (683)
T ss_pred             cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence            57999999999999999999999999999999999988776666677677888887666778999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc-CCCC
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-KPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~-~~~~  239 (586)
                      |||+.||+|.-.++.-+++.+..+..++..|+.||-+||++||++||||.+|||+   +..++|||.|||+++.- -.+.
T Consensus       429 MEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmL---d~eGHiKi~DFGmcKEni~~~~  505 (683)
T KOG0696|consen  429 MEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIFDGV  505 (683)
T ss_pred             EEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEe---ccCCceEeeecccccccccCCc
Confidence            9999999999999999999999999999999999999999999999999999999   78899999999999753 3345


Q ss_pred             ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHH
Q 043828          240 QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV  318 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  318 (586)
                      ...+.+|||.|+|||++. ++|+..+|+||+||+||||+.|++||.+.+++++.+.|......+|.    .+|.++.+++
T Consensus       506 TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPK----slSkEAv~ic  581 (683)
T KOG0696|consen  506 TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPK----SLSKEAVAIC  581 (683)
T ss_pred             ceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcc----cccHHHHHHH
Confidence            567899999999999986 78999999999999999999999999999999999999999998876    5899999999


Q ss_pred             HHccCCCCCCCCCH-----HHHhcCCCccCCCC
Q 043828          319 KNMLDPNPYNRLTL-----EEVLENPWIKNDNH  346 (586)
Q Consensus       319 ~~~L~~dp~~Rps~-----~eil~hp~~~~~~~  346 (586)
                      +.+|.+.|.+|..+     .+|..||||+....
T Consensus       582 kg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDW  614 (683)
T KOG0696|consen  582 KGLLTKHPGKRLGCGPEGERDIREHPFFRRIDW  614 (683)
T ss_pred             HHHhhcCCccccCCCCccccchhhCcchhhccH
Confidence            99999999999843     68999999997643

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=1.4e-41  Score=337.03  Aligned_cols=252  Identities=33%  Similarity=0.539  Sum_probs=210.9

Q ss_pred             eccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCCCC
Q 043828           89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGE  168 (586)
Q Consensus        89 lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~gg~  168 (586)
                      ||+|+||+||+|.+..+|+.||+|.+.+...........+.+|+.+++.+ +||||++++++++..+.+|+||||+++++
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKV-SSRFIVSLAYAFETKDDLCLVMTLMNGGD   79 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhC-CCCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence            69999999999999999999999999765444333445667899999999 89999999999999999999999999999


Q ss_pred             hHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCceecccC
Q 043828          169 LFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVG  246 (586)
Q Consensus       169 L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~g  246 (586)
                      |.+++....  .+++..+..++.|++.||.|||++|++||||+|+||++   +.++.++|+|||.+.............+
T Consensus        80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~  156 (277)
T cd05577          80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLL---DDHGNVRISDLGLAVELKGGKKIKGRAG  156 (277)
T ss_pred             HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---CCCCCEEEccCcchhhhccCCccccccC
Confidence            999987755  68999999999999999999999999999999999999   5678999999999877654433444568


Q ss_pred             Cccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCC
Q 043828          247 SPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPN  325 (586)
Q Consensus       247 t~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  325 (586)
                      +..|+|||++. +.++.++||||+||++|+|++|..||...........+.......+....+.+++.+.++|.+||+.|
T Consensus       157 ~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  236 (277)
T cd05577         157 TPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKD  236 (277)
T ss_pred             CCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCC
Confidence            88999999985 45888999999999999999999999765442222222222222222333457899999999999999


Q ss_pred             CCCCC-----CHHHHhcCCCccCC
Q 043828          326 PYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       326 p~~Rp-----s~~eil~hp~~~~~  344 (586)
                      |.+||     ++.+++.||||+..
T Consensus       237 p~~R~~~~~~~~~~ll~h~~~~~~  260 (277)
T cd05577         237 PEKRLGCRGGSADEVREHPLFKDL  260 (277)
T ss_pred             hhHccCCCcccHHHHHhChhhhcC
Confidence            99999     99999999999753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=8.4e-42  Score=348.72  Aligned_cols=249  Identities=24%  Similarity=0.369  Sum_probs=200.3

Q ss_pred             cCeeecceeccCCceEEEEEEEc-----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC-
Q 043828           81 DKYTFGKELGRGEFGITHQCFEI-----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK-  154 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~-  154 (586)
                      ++|++.+.||.|+||.||+|.+.     .+++.||+|++....  .......+.+|+.++..+.+||||+++++++... 
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (338)
T cd05102           7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGACTKPN   84 (338)
T ss_pred             hHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence            68999999999999999999752     345689999986432  2223467889999999998899999999988754 


Q ss_pred             CeEEEEEeccCCCChHHHHHhC----------------------------------------------------------
Q 043828          155 DAIYLVMELCEGGELFDRIVNK----------------------------------------------------------  176 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~----------------------------------------------------------  176 (586)
                      ..+|+|||||++|+|.+++...                                                          
T Consensus        85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (338)
T cd05102          85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD  164 (338)
T ss_pred             CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence            4689999999999999988642                                                          


Q ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCc---eecccCCcc
Q 043828          177 ----GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPY  249 (586)
Q Consensus       177 ----~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~  249 (586)
                          ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++........   .....+++.
T Consensus       165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~---~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~  241 (338)
T cd05102         165 DLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGSARLPLK  241 (338)
T ss_pred             ccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEE---cCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence                236778889999999999999999999999999999999   5678899999999976532211   122345678


Q ss_pred             ccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHH-HHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCC
Q 043828          250 YMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEG-IAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNP  326 (586)
Q Consensus       250 y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp  326 (586)
                      |+|||++. ..++.++|||||||++|+|++ |..||.+..... ....+..+.. ..  ....+++.+.+||.+||+.||
T Consensus       242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~l~~li~~cl~~dp  318 (338)
T cd05102         242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTR-MR--APENATPEIYRIMLACWQGDP  318 (338)
T ss_pred             ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCC-CC--CCCCCCHHHHHHHHHHccCCh
Confidence            99999986 468999999999999999997 999998755433 3333333322 11  124578899999999999999


Q ss_pred             CCCCCHHHHhc
Q 043828          327 YNRLTLEEVLE  337 (586)
Q Consensus       327 ~~Rps~~eil~  337 (586)
                      .+|||+.++++
T Consensus       319 ~~RPs~~el~~  329 (338)
T cd05102         319 KERPTFSALVE  329 (338)
T ss_pred             hhCcCHHHHHH
Confidence            99999999986

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=7.8e-43  Score=351.65  Aligned_cols=254  Identities=24%  Similarity=0.455  Sum_probs=221.7

Q ss_pred             eecceeccCCceEEEEEEEccCCcEEEEEEeeccc-cCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe--EEEE
Q 043828           84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEK-LKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA--IYLV  160 (586)
Q Consensus        84 ~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~-~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~--~~iv  160 (586)
                      ++...||+|+|-+||+|.+..+|..||.--+.... .+.+...+++..|+.+|+.| +||||+++|++|.+...  +.+|
T Consensus        43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL-~H~NIirfy~SW~d~~n~~in~i  121 (632)
T KOG0584|consen   43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSL-KHPNIIRFYDSWVDTDNKTINFI  121 (632)
T ss_pred             ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccC-CCCceeeeeeheecCCCceeeee
Confidence            44568999999999999999999999976554333 23455678999999999999 99999999999987655  8899


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc--CceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN--GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      +|++..|+|..|+.+.++++...+..|++||+.||.|||++  .|+|||||-+||+|+  ...|.|||+|+|+|......
T Consensus       122 TEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin--G~~G~VKIGDLGLAtl~r~s  199 (632)
T KOG0584|consen  122 TELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN--GNLGEVKIGDLGLATLLRKS  199 (632)
T ss_pred             eecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc--CCcCceeecchhHHHHhhcc
Confidence            99999999999999999999999999999999999999988  599999999999996  56889999999999987543


Q ss_pred             CceecccCCccccchhhhhccCCCcchHHHHHHHHHHHhhCCCCCCC-CCHHHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          239 EQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWA-ETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                       .....+|||.|||||+....|+..+||||||+.++||+|+.+||.. .++.+++.++..|..+-....  --.+++++|
T Consensus       200 -~aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~k--V~dPevr~f  276 (632)
T KOG0584|consen  200 -HAKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSK--VKDPEVREF  276 (632)
T ss_pred             -ccceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhc--cCCHHHHHH
Confidence             3345899999999999999999999999999999999999999964 567788888888865433222  126899999


Q ss_pred             HHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          318 VKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       318 i~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      |.+||.. .+.|||+.|+|.||||...
T Consensus       277 IekCl~~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  277 IEKCLAT-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             HHHHhcC-chhccCHHHHhhChhhccc
Confidence            9999999 9999999999999999864

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.6e-41  Score=352.81  Aligned_cols=250  Identities=22%  Similarity=0.359  Sum_probs=203.9

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      ...|.+.+.||+|+||.||+|.+..+++.||+|....         ..+.+|+.+|++| +|||||++++++...+..++
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L-~HpnIv~l~~~~~~~~~~~l  237 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRL-SHPAVLALLDVRVVGGLTCL  237 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEE
Confidence            4579999999999999999999999999999996321         2356899999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      |||++. ++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||+   +..+.+||+|||++......
T Consensus       238 v~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl---~~~~~vkL~DFGla~~~~~~  313 (461)
T PHA03211        238 VLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLV---NGPEDICLGDFGAACFARGS  313 (461)
T ss_pred             EEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEE---CCCCCEEEcccCCceecccc
Confidence            999995 6888887654 469999999999999999999999999999999999999   56788999999999765432


Q ss_pred             C---ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCC--------HHHHHHHHHhCccC-----
Q 043828          239 E---QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAET--------EEGIAHAIIRGKID-----  301 (586)
Q Consensus       239 ~---~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~i~~~~~~-----  301 (586)
                      .   ......||+.|+|||++.+ .++.++|||||||++|+|++|..|+....        ...+...+......     
T Consensus       314 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~  393 (461)
T PHA03211        314 WSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFP  393 (461)
T ss_pred             cccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCC
Confidence            1   1224579999999999864 68999999999999999999887654321        22333333322211     


Q ss_pred             ----------------------CCCCCCC---CCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          302 ----------------------FERDPWP---KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       302 ----------------------~~~~~~~---~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                                            +....|.   .++..+.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       394 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        394 QHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             CCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence                                  1111122   45668999999999999999999999999999974

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=4.1e-41  Score=336.82  Aligned_cols=259  Identities=30%  Similarity=0.531  Sum_probs=219.6

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ....+|++.+.||.|+||.||+|++..+|+.||+|.+.....   ...+.+.+|+.+++.+ +||||+++++++.....+
T Consensus        16 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~   91 (296)
T cd06655          16 DPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ---PKKELIINEILVMKEL-KNPNIVNFLDSFLVGDEL   91 (296)
T ss_pred             CCcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC---chHHHHHHHHHHHHhc-CCCceeeeeeeEecCceE
Confidence            344689999999999999999999999999999999865432   2346788999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |+|+||+++++|..++.. ..+++..+..++.|++.||.|||+.|++||||||+||++   +.++.+||+|||++.....
T Consensus        92 ~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili---~~~~~~kl~dfg~~~~~~~  167 (296)
T cd06655          92 FVVMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLL---GMDGSVKLTDFGFCAQITP  167 (296)
T ss_pred             EEEEEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEccCccchhccc
Confidence            999999999999988765 468999999999999999999999999999999999999   5678899999999876543


Q ss_pred             CCc-eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          238 GEQ-FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       238 ~~~-~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      ... .....|++.|+|||.+.. .++.++|||||||++|+|++|..||...+.......+...... .......+++.+.
T Consensus       168 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  246 (296)
T cd06655         168 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLSPIFR  246 (296)
T ss_pred             ccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCc-ccCCcccCCHHHH
Confidence            322 234568899999999864 5888999999999999999999999887766555544433221 1222346889999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      +||.+||..||.+|||+.+++.||||+...
T Consensus       247 ~li~~~l~~dp~~Rpt~~~il~~~~~~~~~  276 (296)
T cd06655         247 DFLNRCLEMDVEKRGSAKELLQHPFLKLAK  276 (296)
T ss_pred             HHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence            999999999999999999999999998643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=4.6e-41  Score=329.25  Aligned_cols=252  Identities=25%  Similarity=0.450  Sum_probs=218.2

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|.+.+.||+|++|.||+|.+..+++.|++|.+...... ......+.+|+.+++.+ +||||+++++++...+.+|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKL-DSSYIIRYYESFLDKGKLNIVM   78 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhc-CCCCeehheeeeccCCEEEEEE
Confidence            488899999999999999999999999999998765433 33456788999999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          162 ELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       162 E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      ||++|++|.+++...  ..+++..++.++.|++.||.|||+.||+|+||||+||++   +..+.++|+|||++.......
T Consensus        79 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili---~~~~~~~l~df~~~~~~~~~~  155 (256)
T cd08529          79 EYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFL---DAYDNVKIGDLGVAKLLSDNT  155 (256)
T ss_pred             EeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---eCCCCEEEcccccceeccCcc
Confidence            999999999998764  568999999999999999999999999999999999999   567899999999988665432


Q ss_pred             c-eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          240 Q-FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       240 ~-~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                      . .....|++.|+|||++. +.++.++|||||||++|+|++|..||...+.......+..+......   ..++..+.++
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  232 (256)
T cd08529         156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVS---QMYSQQLAQL  232 (256)
T ss_pred             chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc---cccCHHHHHH
Confidence            2 23456889999999986 45788999999999999999999999888877766666655432211   2578899999


Q ss_pred             HHHccCCCCCCCCCHHHHhcCCCc
Q 043828          318 VKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       318 i~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      |.+||+.+|++||++.+++.|||+
T Consensus       233 i~~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         233 IDQCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             HHHHccCCcccCcCHHHHhhCCCC
Confidence            999999999999999999999996

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=6.7e-42  Score=335.70  Aligned_cols=252  Identities=27%  Similarity=0.482  Sum_probs=218.7

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|++.+.||.|+||.||+|.+..+++.||+|++.+.........+.+.+|+.+++++ +||||+++++.+.....+|+|+
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~   79 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-NHPFLVNLWYSFQDEENMYLVV   79 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC-CCCChHHHHHhhcCCCeEEEEE
Confidence            589999999999999999999989999999999876554444567899999999999 9999999999999999999999


Q ss_pred             eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCce
Q 043828          162 ELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF  241 (586)
Q Consensus       162 E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~  241 (586)
                      ||+.|++|.+++.....+++..+..++.||+.||.|||+++++|+||+|+||++   +.++.++|+|||.+.........
T Consensus        80 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~---~~~~~~~l~d~~~~~~~~~~~~~  156 (258)
T cd05578          80 DLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL---DEQGHVHITDFNIATKVTPDTLT  156 (258)
T ss_pred             eCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE---cCCCCEEEeecccccccCCCccc
Confidence            999999999999877789999999999999999999999999999999999999   56789999999998876554444


Q ss_pred             ecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCH---HHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          242 CEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETE---EGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       242 ~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                      ....|+..|+|||++.. .++.++|+||||+++|+|++|..||...+.   ..+.........    ...+.++..+.++
T Consensus       157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~  232 (258)
T cd05578         157 TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADV----LYPATWSTEAIDA  232 (258)
T ss_pred             cccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccc----cCcccCcHHHHHH
Confidence            45678899999999864 578999999999999999999999987663   333333222222    2224578999999


Q ss_pred             HHHccCCCCCCCCCH--HHHhcCCCc
Q 043828          318 VKNMLDPNPYNRLTL--EEVLENPWI  341 (586)
Q Consensus       318 i~~~L~~dp~~Rps~--~eil~hp~~  341 (586)
                      |.+||..||.+||++  +++++||||
T Consensus       233 i~~~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         233 INKLLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             HHHHccCChhHcCCccHHHHhcCCCC
Confidence            999999999999999  999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-42  Score=345.84  Aligned_cols=251  Identities=23%  Similarity=0.394  Sum_probs=212.7

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ...++..++..||+|.||+||+|++-  | .||||++....... ...+.|++|+.++++- +|.||+-+.|++..+.. 
T Consensus       389 Ip~~ev~l~~rIGsGsFGtV~Rg~wh--G-dVAVK~Lnv~~pt~-~qlqaFKnEVa~lkkT-RH~NIlLFMG~~~~p~~-  462 (678)
T KOG0193|consen  389 IPPEEVLLGERIGSGSFGTVYRGRWH--G-DVAVKLLNVDDPTP-EQLQAFKNEVAVLKKT-RHENILLFMGACMNPPL-  462 (678)
T ss_pred             cCHHHhhccceeccccccceeecccc--c-ceEEEEEecCCCCH-HHHHHHHHHHHHHhhc-chhhheeeehhhcCCce-
Confidence            34467788899999999999999763  3 69999998776544 4688999999999998 89999999999988776 


Q ss_pred             EEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      .||+.+|+|-+|+.+++- ..++.....+.|++||++|+.|||.++|||||||..||++   .+++.|||+|||++....
T Consensus       463 AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl---~~~~kVkIgDFGLatvk~  539 (678)
T KOG0193|consen  463 AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL---HEDLKVKIGDFGLATVKT  539 (678)
T ss_pred             eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE---ccCCcEEEecccceeeee
Confidence            999999999999998864 4568899999999999999999999999999999999999   667999999999986532


Q ss_pred             ---CCCceecccCCccccchhhhh----ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCC-CCC
Q 043828          237 ---PGEQFCEIVGSPYYMAPEVLR----RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD-PWP  308 (586)
Q Consensus       237 ---~~~~~~~~~gt~~y~aPE~l~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~  308 (586)
                         .........|...|||||+++    ..|+..+|||||||++|||++|..||.....++++-.+-+|....... ...
T Consensus       540 ~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s  619 (678)
T KOG0193|consen  540 RWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRS  619 (678)
T ss_pred             eeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhc
Confidence               233444566888999999985    359999999999999999999999999777777766666664433222 223


Q ss_pred             CCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          309 KVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ..++++++|+..||..++++||.+.+||.
T Consensus       620 ~~pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  620 NCPKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             cCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence            56679999999999999999999999987

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=3.8e-41  Score=336.62  Aligned_cols=257  Identities=27%  Similarity=0.442  Sum_probs=216.5

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .+.|+++++||.|+||.||+|.+..++..+++|.+...   .......+.+|+.+++.+ +||||+++++++..++.+|+
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   86 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATC-NHPYIVKLLGAFYWDGKLWI   86 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhC-CCCcEeeeEEEEEeCCeEEE
Confidence            36799999999999999999999999999999998654   233456788899999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||+++++|..++.. ...+++..+..++.|++.+|.|||+.+|+||||||+||++   +.++.++|+|||++......
T Consensus        87 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~dfg~~~~~~~~  163 (292)
T cd06644          87 MIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLL---TLDGDIKLADFGVSAKNVKT  163 (292)
T ss_pred             EEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEE---cCCCCEEEccCccceecccc
Confidence            9999999999887754 4568999999999999999999999999999999999999   56788999999988654322


Q ss_pred             -CceecccCCccccchhhhh------ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCC
Q 043828          239 -EQFCEIVGSPYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS  311 (586)
Q Consensus       239 -~~~~~~~gt~~y~aPE~l~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  311 (586)
                       .......+++.|+|||++.      ..++.++|||||||++|+|++|.+||...+.......+....... ......++
T Consensus       164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  242 (292)
T cd06644         164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT-LSQPSKWS  242 (292)
T ss_pred             ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCcc-CCCCcccC
Confidence             2223456889999999873      236788999999999999999999998877666555554432211 11123578


Q ss_pred             HHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       312 ~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ..+.++|.+||..+|++||++.++++||||...
T Consensus       243 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  275 (292)
T cd06644         243 MEFRDFLKTALDKHPETRPSAAQLLEHPFVSSV  275 (292)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            899999999999999999999999999999864

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=3.5e-41  Score=331.36  Aligned_cols=250  Identities=32%  Similarity=0.587  Sum_probs=216.0

Q ss_pred             eccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCCCC
Q 043828           89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGE  168 (586)
Q Consensus        89 lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~gg~  168 (586)
                      ||.|++|.||+|++..+++.+|+|++.+.........+.+.+|+.+++.+ +||||+++++.+.++..+|+||||+++++
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC-NHPFIVKLYRTFKDKKYIYMLMEYCLGGE   79 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhC-CCCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence            79999999999999889999999999876554444457799999999999 89999999999999999999999999999


Q ss_pred             hHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCceecccCCc
Q 043828          169 LFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP  248 (586)
Q Consensus       169 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~  248 (586)
                      |.+++.....+++..+..++.||+.||.|||+++++|+||+|+||++   +.++.++|+|||++.............|++
T Consensus        80 L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv---~~~~~~~l~df~~~~~~~~~~~~~~~~~~~  156 (262)
T cd05572          80 LWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLL---DSNGYVKLVDFGFAKKLKSGQKTWTFCGTP  156 (262)
T ss_pred             HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE---cCCCCEEEeeCCcccccCcccccccccCCc
Confidence            99999888789999999999999999999999999999999999999   567899999999998765443334457899


Q ss_pred             cccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCC--HHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCC
Q 043828          249 YYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAET--EEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPN  325 (586)
Q Consensus       249 ~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  325 (586)
                      .|+|||.+. ..++.++|+||+|+++|+|++|..||....  .......+..+......+  ...+..+.++|.+||..+
T Consensus       157 ~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~  234 (262)
T cd05572         157 EYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFP--NYIDKAAKDLIKQLLRRN  234 (262)
T ss_pred             CccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCC--cccCHHHHHHHHHHccCC
Confidence            999999986 458889999999999999999999998776  555666655322222222  234889999999999999


Q ss_pred             CCCCCC-----HHHHhcCCCccCC
Q 043828          326 PYNRLT-----LEEVLENPWIKND  344 (586)
Q Consensus       326 p~~Rps-----~~eil~hp~~~~~  344 (586)
                      |.+||+     ++|+++||||+..
T Consensus       235 p~~R~~~~~~~~~~l~~~~~~~~~  258 (262)
T cd05572         235 PEERLGNLKGGIKDIKKHKWFNGF  258 (262)
T ss_pred             hhhCcCCcccCHHHHhcChhhhCC
Confidence            999999     9999999999854

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=2.2e-41  Score=333.60  Aligned_cols=250  Identities=24%  Similarity=0.417  Sum_probs=203.1

Q ss_pred             ccCeeeccee--ccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           80 LDKYTFGKEL--GRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        80 ~~~y~~~~~l--G~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .++|.+.+.+  |.|+||.||++.+..++..+|+|.+.......        .|+.+...+.+||||+++++++..++.+
T Consensus        13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~   84 (267)
T PHA03390         13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGH   84 (267)
T ss_pred             HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCee
Confidence            3567777766  99999999999999999999999987653221        1333333344799999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCC-ceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENS-QLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~-~vkl~Dfg~a~~~~  236 (586)
                      |+||||+++++|.+++.....+++..+..++.|++.||.|||+.|++||||||+||++.   ..+ .++|+|||++....
T Consensus        85 ~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~~l~dfg~~~~~~  161 (267)
T PHA03390         85 VLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYD---RAKDRIYLCDYGLCKIIG  161 (267)
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEe---CCCCeEEEecCccceecC
Confidence            99999999999999998877899999999999999999999999999999999999994   444 89999999987654


Q ss_pred             CCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          237 PGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      ..   ....|++.|+|||++. ..++.++||||+||++|+|++|..||.......................++.+++.+.
T Consensus       162 ~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (267)
T PHA03390        162 TP---SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNAN  238 (267)
T ss_pred             CC---ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHH
Confidence            32   2346889999999986 4688999999999999999999999976544332111111111222233456899999


Q ss_pred             HHHHHccCCCCCCCCC-HHHHhcCCCccC
Q 043828          316 ELVKNMLDPNPYNRLT-LEEVLENPWIKN  343 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps-~~eil~hp~~~~  343 (586)
                      +||.+||+.+|.+||+ ++++|+||||++
T Consensus       239 ~li~~~l~~~p~~R~~~~~~~l~h~~~~~  267 (267)
T PHA03390        239 DFVQSMLKYNINYRLTNYNEIIKHPFLKI  267 (267)
T ss_pred             HHHHHHhccChhhCCchHHHHhcCCcccC
Confidence            9999999999999996 699999999974

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=2.6e-41  Score=338.48  Aligned_cols=261  Identities=30%  Similarity=0.524  Sum_probs=217.8

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      +....+|++.+.||.|+||.||+|.+..+++.||+|.+......   ..+.+.+|+.+++.+ +||||+++++++.....
T Consensus        15 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~   90 (297)
T cd06656          15 GDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP---KKELIINEILVMREN-KNPNIVNYLDSYLVGDE   90 (297)
T ss_pred             CChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc---hHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCE
Confidence            45557999999999999999999999999999999998754322   235688899999999 99999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|+||||+++++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+||++   +.++.++|+|||++....
T Consensus        91 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili---~~~~~~~l~Dfg~~~~~~  166 (297)
T cd06656          91 LWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQIT  166 (297)
T ss_pred             EEEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEECcCccceEcc
Confidence            9999999999999998765 468999999999999999999999999999999999999   567899999999987654


Q ss_pred             CCCc-eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          237 PGEQ-FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       237 ~~~~-~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      .... .....+++.|+|||.+.+ .++.++||||+||++|+|++|..||...+.......+..... ........++..+
T Consensus       167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  245 (297)
T cd06656         167 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT-PELQNPERLSAVF  245 (297)
T ss_pred             CCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCC-CCCCCccccCHHH
Confidence            3322 234568899999999864 578899999999999999999999987665433322222211 1111224578889


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCccCCCC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWIKNDNH  346 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~  346 (586)
                      ++||.+||..+|.+||++.++++||||+....
T Consensus       246 ~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~  277 (297)
T cd06656         246 RDFLNRCLEMDVDRRGSAKELLQHPFLKLAKP  277 (297)
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCchhccccc
Confidence            99999999999999999999999999986543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=3.3e-41  Score=334.78  Aligned_cols=251  Identities=24%  Similarity=0.360  Sum_probs=208.5

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|+||.||+|++..+++.||+|++....  .......+.+|+.+++++ +||||+++++++...+..++|
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv   77 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKC-DSPYIIGFYGAFFVENRISIC   77 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEECCEEEEE
Confidence            36889999999999999999999999999999987543  122345688999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCc
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ  240 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~  240 (586)
                      |||+++++|..+    ..+++..+..++.|++.||.|||+.||+|+||||+||++   +.++.++|+|||++...... .
T Consensus        78 ~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill---~~~~~~~l~dfg~~~~~~~~-~  149 (279)
T cd06619          78 TEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLV---NTRGQVKLCDFGVSTQLVNS-I  149 (279)
T ss_pred             EecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEE---CCCCCEEEeeCCcceecccc-c
Confidence            999999998643    357899999999999999999999999999999999999   56789999999998765432 2


Q ss_pred             eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCH-------HHHHHHHHhCccCCCCCCCCCCCH
Q 043828          241 FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETE-------EGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       241 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      .....|++.|+|||++. ..++.++|||||||++|+|++|..||.....       ......+....  .+..+....++
T Consensus       150 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  227 (279)
T cd06619         150 AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED--PPVLPVGQFSE  227 (279)
T ss_pred             ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC--CCCCCCCcCCH
Confidence            33457899999999986 4688999999999999999999999965321       12222222221  11222345788


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .+.++|.+||+.+|.+||+++++++||||+..
T Consensus       228 ~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~  259 (279)
T cd06619         228 KFVHFITQCMRKQPKERPAPENLMDHPFIVQY  259 (279)
T ss_pred             HHHHHHHHHhhCChhhCCCHHHHhcCcccccc
Confidence            99999999999999999999999999999865

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=4.9e-41  Score=334.10  Aligned_cols=255  Identities=29%  Similarity=0.475  Sum_probs=215.5

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      .|++.+.||.|+||.||+|.+..++..+++|.+....   ......+.+|+.+++.+ +||||+++++++..++..|+||
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~~v~   81 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS---EEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLWILI   81 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC---HHHHHHHHHHHHHHHHC-CCCCeeeEEEEEeeCCEEEEEE
Confidence            4788999999999999999999999999999985432   23356788899999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC-C
Q 043828          162 ELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-E  239 (586)
Q Consensus       162 E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~  239 (586)
                      ||+++++|..++.. ...+++..+..++.|++.||.|||+.||+||||||+||++   +.++.+||+|||++...... .
T Consensus        82 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili---~~~~~~kl~dfg~~~~~~~~~~  158 (282)
T cd06643          82 EFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILF---TLDGDIKLADFGVSAKNTRTIQ  158 (282)
T ss_pred             EecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE---ccCCCEEEcccccccccccccc
Confidence            99999999887765 4578999999999999999999999999999999999999   56788999999998754322 2


Q ss_pred             ceecccCCccccchhhhh------ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          240 QFCEIVGSPYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ......|++.|+|||++.      ..++.++||||+||++|+|++|.+||...+.......+........ .....++..
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  237 (282)
T cd06643         159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL-AQPSRWSSE  237 (282)
T ss_pred             ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCC-CCccccCHH
Confidence            223456899999999973      2367899999999999999999999988777666666554432211 112357889


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +.+||.+||+.||.+|||+.++++||||+..
T Consensus       238 ~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  268 (282)
T cd06643         238 FKDFLKKCLEKNVDARWTTTQLLQHPFVTVN  268 (282)
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence            9999999999999999999999999999864

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=1.9e-41  Score=344.30  Aligned_cols=255  Identities=20%  Similarity=0.290  Sum_probs=205.3

Q ss_pred             ecceeccC--CceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEe
Q 043828           85 FGKELGRG--EFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVME  162 (586)
Q Consensus        85 ~~~~lG~G--~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E  162 (586)
                      ++++||+|  +||+||++.+..+|+.||+|++...... ......+.+|+.+++.+ +||||+++++++..++.+|+|||
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e   79 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT-NEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVTS   79 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhcc-HHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEECCEEEEEEe
Confidence            56789999  6789999999999999999998765432 22345788899999999 89999999999999999999999


Q ss_pred             ccCCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-
Q 043828          163 LCEGGELFDRIVN--KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-  239 (586)
Q Consensus       163 ~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-  239 (586)
                      |+++|+|.+++..  ...+++..+..++.|++.||.|||+++|+||||||+||++   +.++.++++||+.+....... 
T Consensus        80 ~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~---~~~~~~~l~~~~~~~~~~~~~~  156 (327)
T cd08227          80 FMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSNLSMINHGQ  156 (327)
T ss_pred             ccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEE---ecCCcEEEcccchhhccccccc
Confidence            9999999999865  3458999999999999999999999999999999999999   566789999998654322110 


Q ss_pred             -------ceecccCCccccchhhhhc---cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCC------
Q 043828          240 -------QFCEIVGSPYYMAPEVLRR---NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE------  303 (586)
Q Consensus       240 -------~~~~~~gt~~y~aPE~l~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~------  303 (586)
                             ......++..|+|||++.+   .|+.++|||||||++|+|++|..||..............+.....      
T Consensus       157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (327)
T cd08227         157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTI  236 (327)
T ss_pred             cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccch
Confidence                   0112356778999999863   488999999999999999999999987655443333332211100      


Q ss_pred             ------------------------------------CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          304 ------------------------------------RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       304 ------------------------------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                                          .+....+++.+.+||.+||+.||.+|||++++++||||+..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~  313 (327)
T cd08227         237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI  313 (327)
T ss_pred             hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence                                                00112356789999999999999999999999999999863

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=4.5e-41  Score=331.18  Aligned_cols=254  Identities=28%  Similarity=0.451  Sum_probs=212.4

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccC---ChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~---~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      +|++.+.||.|+||.||+|.. .+|+.+|+|.+......   .......+.+|+.+++++ +||||+++++++.+...+|
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~   78 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-KHVNIVQYLGTCLDDNTIS   78 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-CCCCEeeEeeEeecCCeEE
Confidence            588999999999999999975 57889999988654321   122345688999999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC-
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP-  237 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~-  237 (586)
                      +||||+++++|.+++.....+++..+..++.|++.||.|||+.+|+|+||+|+||++   +..+.++|+|||++..... 
T Consensus        79 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~~  155 (265)
T cd06631          79 IFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVML---MPNGIIKLIDFGCARRLAWV  155 (265)
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEE---CCCCeEEeccchhhHhhhhc
Confidence            999999999999999887889999999999999999999999999999999999999   5678999999999875421 


Q ss_pred             ------CCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          238 ------GEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       238 ------~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                            ........|+..|+|||++.+ .++.++|||||||++|+|++|..||...+.......+.......+. ....+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~  234 (265)
T cd06631         156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPR-LPDSF  234 (265)
T ss_pred             cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCC-CCCCC
Confidence                  111234568999999999864 5788999999999999999999999876655444443333222221 22457


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      +..+.++|.+||.++|.+||++.+++.||||
T Consensus       235 ~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         235 SAAAIDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             CHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            8999999999999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-42  Score=361.25  Aligned_cols=246  Identities=31%  Similarity=0.491  Sum_probs=208.8

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEE-EEe------
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEA-YED------  153 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~-~~~------  153 (586)
                      .+++|.+.|.+|||+.||+|.+...|..||+|++...   ++.....+.+||.+|+.|++|+|||.|++. ...      
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~  113 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG  113 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence            3788999999999999999999888899999998554   455678899999999999999999999993 321      


Q ss_pred             CCeEEEEEeccCCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCceEeecCCCCCceEEeec
Q 043828          154 KDAIYLVMELCEGGELFDRIVN--KGHYTERAAAAVGKTILRIVKVCHENG--VMHRDLKPENFLFADGSENSQLKAIDF  229 (586)
Q Consensus       154 ~~~~~iv~E~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivHrDlkp~Nill~~~~~~~~vkl~Df  229 (586)
                      .-.+.|+||||+||.|.+++..  ...|++..+.+|+.++++||.+||...  |||||||-+|||+   ..++.+|||||
T Consensus       114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLl---s~~g~~KLCDF  190 (738)
T KOG1989|consen  114 VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLL---SADGNYKLCDF  190 (738)
T ss_pred             eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEE---cCCCCEEeCcc
Confidence            1357899999999999999974  456999999999999999999999997  9999999999999   67789999999


Q ss_pred             ccccccCCCC-c---------eecccCCccccchhhhh----ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHH
Q 043828          230 GLSIFFKPGE-Q---------FCEIVGSPYYMAPEVLR----RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAI  295 (586)
Q Consensus       230 g~a~~~~~~~-~---------~~~~~gt~~y~aPE~l~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i  295 (586)
                      |.|.-.-... .         .-....|+.|+|||++.    ...+.|+|||+|||+||-|+....||.....    ..|
T Consensus       191 GSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~----laI  266 (738)
T KOG1989|consen  191 GSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK----LAI  266 (738)
T ss_pred             cccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc----eeE
Confidence            9986432111 0         11235699999999984    2579999999999999999999999977644    356


Q ss_pred             HhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          296 IRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +++.+.||..  +.++..+++||+.||+.||.+||++-|++.+
T Consensus       267 lng~Y~~P~~--p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  267 LNGNYSFPPF--PNYSDRLKDLIRTMLQPNPDERPNIYQVLEE  307 (738)
T ss_pred             EeccccCCCC--ccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence            7788777654  6899999999999999999999999999865

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=7.4e-41  Score=328.00  Aligned_cols=252  Identities=28%  Similarity=0.545  Sum_probs=214.8

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe-CCeEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED-KDAIYLV  160 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~-~~~~~iv  160 (586)
                      .|++.+.||.|++|.||++.+..+++.+|+|++...... ....+.+.+|+.+++++ +||||+++++.+.. +..+|+|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~lv   78 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS-RRERKAAEQEAQLLSQL-KHPNIVAYRESWEGEDGLLYIV   78 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC-HHHHHHHHHHHHHHHhC-CCCCeeeeeeeecCCCCEEEEE
Confidence            489999999999999999999999999999999765432 22346788899999999 89999999998864 4568999


Q ss_pred             EeccCCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          161 MELCEGGELFDRIVN--KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      |||+++++|.+++..  ...+++..+..++.|++.||.+||+.||+||||||+||++   +..+.++|+|||++......
T Consensus        79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~---~~~~~~~l~df~~~~~~~~~  155 (257)
T cd08223          79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFL---TRTNIIKVGDLGIARVLENQ  155 (257)
T ss_pred             ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEE---ecCCcEEEecccceEEeccc
Confidence            999999999998876  3458999999999999999999999999999999999999   56789999999998766432


Q ss_pred             -CceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          239 -EQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       239 -~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                       .......|++.|+|||++. ..++.++||||+||++|+|++|..||...+.......+..+....   ....+++.+.+
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  232 (257)
T cd08223         156 CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPP---MPKDYSPELGE  232 (257)
T ss_pred             CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCC---CccccCHHHHH
Confidence             2223456899999999986 457889999999999999999999998877766666666554322   22457899999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      +|.+||+.||.+|||+.+++.||||
T Consensus       233 li~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         233 LIATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             HHHHHhccCcccCCCHHHHhcCCCC
Confidence            9999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-42  Score=293.88  Aligned_cols=257  Identities=29%  Similarity=0.500  Sum_probs=220.5

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      .+|.-.++||+|.||+||++++..+++.||+|.++...-... .-....+||-+|+.| +|.|||+++++...+..+-+|
T Consensus         2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddeg-vpssalreicllkel-khknivrl~dvlhsdkkltlv   79 (292)
T KOG0662|consen    2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEG-VPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLV   79 (292)
T ss_pred             cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCC-CcHHHHHHHHHHHHh-hhcceeehhhhhccCceeEEe
Confidence            467888999999999999999999999999999987754333 336778899999999 999999999999999999999


Q ss_pred             EeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      +|||. .+|..+... ++.+....++.++.|++.||.+||++++.||||||.|.|+   +.++.+||.|||+++...-.-
T Consensus        80 fe~cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli---n~ngelkladfglarafgipv  155 (292)
T KOG0662|consen   80 FEFCD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPV  155 (292)
T ss_pred             HHHhh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe---ccCCcEEecccchhhhcCCce
Confidence            99995 478777755 6779999999999999999999999999999999999999   788999999999998764332


Q ss_pred             -ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCC------
Q 043828          240 -QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPK------  309 (586)
Q Consensus       240 -~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~------  309 (586)
                       -....+.|.+|++|.++-+  -|+...|+||.|||+.|+.. |++.|.+.+..+.+..|.+.......+.||.      
T Consensus       156 rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpd  235 (292)
T KOG0662|consen  156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPD  235 (292)
T ss_pred             EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCC
Confidence             2233467999999999854  59999999999999999976 7888999999888888876554444444432      


Q ss_pred             -------------------CCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          310 -------------------VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       310 -------------------~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                                         ++...++|++++|.-+|.+|++++++++||||..
T Consensus       236 yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d  288 (292)
T KOG0662|consen  236 YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSD  288 (292)
T ss_pred             CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccc
Confidence                               3456789999999999999999999999999975

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=8.2e-41  Score=334.09  Aligned_cols=258  Identities=26%  Similarity=0.425  Sum_probs=213.4

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC--
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK--  154 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~--  154 (586)
                      +...++|.+.+.||+|+||.||+|....+++.+|+|++....    .....+.+|+.+++++.+||||+++++++...  
T Consensus        18 ~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~   93 (291)
T cd06639          18 GDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADK   93 (291)
T ss_pred             CCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccc
Confidence            445688999999999999999999999999999999986432    12356788999999997899999999998753  


Q ss_pred             ---CeEEEEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEe
Q 043828          155 ---DAIYLVMELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI  227 (586)
Q Consensus       155 ---~~~~iv~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~  227 (586)
                         +.+|+||||+++++|.+++..    ...+++..++.++.|++.||.|||+.+|+||||||+||++   +..+.+||+
T Consensus        94 ~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili---~~~~~~kl~  170 (291)
T cd06639          94 LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILL---TTEGGVKLV  170 (291)
T ss_pred             cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---cCCCCEEEe
Confidence               468999999999999988753    4568999999999999999999999999999999999999   567789999


Q ss_pred             ecccccccCCCC-ceecccCCccccchhhhhc------cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc
Q 043828          228 DFGLSIFFKPGE-QFCEIVGSPYYMAPEVLRR------NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI  300 (586)
Q Consensus       228 Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~l~~------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~  300 (586)
                      |||++....... ......|++.|+|||++..      .++.++|||||||++|+|++|.+||...........+.+...
T Consensus       171 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~  250 (291)
T cd06639         171 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPP  250 (291)
T ss_pred             ecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCC
Confidence            999987654322 2234568899999999752      267899999999999999999999988766555555444322


Q ss_pred             CCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCcc
Q 043828          301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK  342 (586)
Q Consensus       301 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~  342 (586)
                      ... .....++..+.+||.+||+.+|++||++.++++||||+
T Consensus       251 ~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         251 PTL-LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             CCC-CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            111 11234678899999999999999999999999999995

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=6.5e-41  Score=328.17  Aligned_cols=253  Identities=27%  Similarity=0.475  Sum_probs=218.6

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|++.+.||+|+||.||+|.+..+++.+|+|.+....... .....+.+|+.+++.+ +||||+++++.+...+.+++||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTK-DERLAAQNECQVLKLL-SHPNIIEYYENFLEDKALMIVM   78 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccccc-HHHHHHHHHHHHHhhC-CCCchhheeeeEecCCEEEEEE
Confidence            5899999999999999999999999999999997654433 3356789999999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          162 ELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       162 E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      ||+++++|.+++...  ..+++..+..++.|++.+|.|||++||+|+||+|+||+++  .....+||+|||++.......
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~--~~~~~~~l~d~~~~~~~~~~~  156 (256)
T cd08220          79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLD--KHKMVVKIGDFGISKILSSKS  156 (256)
T ss_pred             ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--CCCCEEEEccCCCceecCCCc
Confidence            999999999999763  3589999999999999999999999999999999999995  234568999999998765544


Q ss_pred             ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHH
Q 043828          240 QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV  318 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  318 (586)
                      ......|++.|+|||.+.+ .++.++||||+|+++|+|++|..||...+.......+.......   ....++..+.+++
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li  233 (256)
T cd08220         157 KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAP---ISDRYSPDLRQLI  233 (256)
T ss_pred             cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCC---CCCCcCHHHHHHH
Confidence            4445678999999999864 57889999999999999999999998877776666665543321   1235789999999


Q ss_pred             HHccCCCCCCCCCHHHHhcCCCc
Q 043828          319 KNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       319 ~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      .+||..+|.+|||+.+++.||||
T Consensus       234 ~~~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         234 LSMLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             HHHccCChhhCCCHHHHhhCCCC
Confidence            99999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=3.5e-41  Score=334.39  Aligned_cols=253  Identities=28%  Similarity=0.444  Sum_probs=203.0

Q ss_pred             eeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhC--CCCCCeeEEEEEEEeCCeEEEEEeccC
Q 043828           88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL--PKHPNIVTYKEAYEDKDAIYLVMELCE  165 (586)
Q Consensus        88 ~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l--~~hpnIv~l~~~~~~~~~~~iv~E~~~  165 (586)
                      .||+|+||.||++.+..+++.+|+|.+.+.............+|..+++.+  .+||||+.+++++..++.+++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            489999999999999999999999999766543332223344454433332  279999999999999999999999999


Q ss_pred             CCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCceeccc
Q 043828          166 GGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIV  245 (586)
Q Consensus       166 gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~  245 (586)
                      +++|.+++..++.+++..+..++.|++.||.|||+++|+||||||+||++   +.++.++|+|||++....... .....
T Consensus        81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~---~~~~~~~l~dfg~~~~~~~~~-~~~~~  156 (279)
T cd05633          81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKK-PHASV  156 (279)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEE---CCCCCEEEccCCcceeccccC-ccCcC
Confidence            99999999888889999999999999999999999999999999999999   567899999999987543322 23356


Q ss_pred             CCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccC
Q 043828          246 GSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD  323 (586)
Q Consensus       246 gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~  323 (586)
                      |++.|+|||.+.  ..++.++||||+||++|+|++|..||........ ..+.......+....+.++..+.++|.+||.
T Consensus       157 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  235 (279)
T cd05633         157 GTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTVNVELPDSFSPELKSLLEGLLQ  235 (279)
T ss_pred             CCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-HHHHHHhhcCCcCCccccCHHHHHHHHHHhc
Confidence            899999999985  3578899999999999999999999975432111 1112222222222334688999999999999


Q ss_pred             CCCCCCC-----CHHHHhcCCCccCCC
Q 043828          324 PNPYNRL-----TLEEVLENPWIKNDN  345 (586)
Q Consensus       324 ~dp~~Rp-----s~~eil~hp~~~~~~  345 (586)
                      .||.+||     |++++++||||+...
T Consensus       236 ~~p~~R~~~~~~~~~~~~~h~~~~~~~  262 (279)
T cd05633         236 RDVSKRLGCLGRGAQEVKEHVFFKGID  262 (279)
T ss_pred             CCHHHhcCCCCCCHHHHHhCccccCCC
Confidence            9999999     699999999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=7.9e-41  Score=329.66  Aligned_cols=254  Identities=26%  Similarity=0.481  Sum_probs=210.2

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCC--hhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe--CCeE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT--EIDIDDVRREVEIMRHLPKHPNIVTYKEAYED--KDAI  157 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~--~~~~  157 (586)
                      +|++.+.||+|+||.||+|.+..++..||+|++.......  ......+.+|+.+++.+ +||||+++++++..  ...+
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-QHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc-CCCCeeeEEEEEEcCCCCEE
Confidence            6899999999999999999999999999999987553221  22345688999999999 89999999999875  3678


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      ++++||+++++|.+++.....+++..+..++.|++.||.|||+.+|+||||+|+||++   +.++.++|+|||++.....
T Consensus        82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~---~~~~~~~l~dfg~~~~~~~  158 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRLQT  158 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCCCcccccc
Confidence            9999999999999999887789999999999999999999999999999999999999   5677899999999875532


Q ss_pred             C----CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCH
Q 043828          238 G----EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       238 ~----~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      .    .......++..|+|||.+.+ .++.++||||+||++|+|++|..||...........+.......  .....+++
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~  236 (266)
T cd06651         159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNP--QLPSHISE  236 (266)
T ss_pred             ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCC--CCchhcCH
Confidence            1    11223568899999999864 57889999999999999999999998766554444433222111  11134678


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhcCCCcc
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLENPWIK  342 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~hp~~~  342 (586)
                      .+++|| +||..+|++||+++++++||||+
T Consensus       237 ~~~~li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         237 HARDFL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             HHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence            899999 67778999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7e-41  Score=329.14  Aligned_cols=253  Identities=30%  Similarity=0.505  Sum_probs=216.6

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||.|+||.||+|.+..+++.+++|++......   ....+.+|+.+++++ +||||+++++++.+...+|++
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l~   78 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD---DFEIIQQEISMLKEC-RHPNIVAYFGSYLRRDKLWIV   78 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh---hHHHHHHHHHHHHhC-CCCChhceEEEEEeCCEEEEE
Confidence            5899999999999999999999889999999999765322   457889999999999 999999999999999999999


Q ss_pred             EeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||+++++|.+++... ..+++..+..++.|++.||.|||+++|+|+||+|+||++   +..+.+||+|||++.......
T Consensus        79 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~~  155 (262)
T cd06613          79 MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILL---TEDGDVKLADFGVSAQLTATI  155 (262)
T ss_pred             EeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEE---CCCCCEEECccccchhhhhhh
Confidence            9999999999988775 789999999999999999999999999999999999999   567889999999987654322


Q ss_pred             -ceecccCCccccchhhhhc----cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCC-CCCCCCCHH
Q 043828          240 -QFCEIVGSPYYMAPEVLRR----NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER-DPWPKVSKE  313 (586)
Q Consensus       240 -~~~~~~gt~~y~aPE~l~~----~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~  313 (586)
                       ......++..|+|||.+..    .++.++|||||||++|+|++|.+||...+.......+....+..+. .....++..
T Consensus       156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (262)
T cd06613         156 AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPV  235 (262)
T ss_pred             hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHH
Confidence             2234578899999999853    5788999999999999999999999887766655555544332211 112346788


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhcCCC
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLENPW  340 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~hp~  340 (586)
                      +.+||.+||..+|..|||+.+++.|||
T Consensus       236 ~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         236 FHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             HHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence            999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=2.5e-41  Score=336.89  Aligned_cols=258  Identities=28%  Similarity=0.407  Sum_probs=213.1

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++++.||+|+||.||+|.+..+|..||+|.+....  .......+.+|+.+++++ +||||+++++.+..++.+|+|
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv   77 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKA-VSPYIVDFYGAFFIEGAVYMC   77 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhc-CCCcHHhhhhheecCCeEEEE
Confidence            46899999999999999999999899999999886532  223346788999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          161 MELCEGGELFDRIVNK---GHYTERAAAAVGKTILRIVKVCHE-NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~-~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      |||+++++|..++...   ..+++..+..++.||+.||.|||+ .+|+||||||+||++   +.++.+||+|||++....
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~  154 (286)
T cd06622          78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLV---NGNGQVKLCDFGVSGNLV  154 (286)
T ss_pred             EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEE---CCCCCEEEeecCCccccc
Confidence            9999999998888663   378999999999999999999997 599999999999999   557889999999987653


Q ss_pred             CCCceecccCCccccchhhhhc-------cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCC
Q 043828          237 PGEQFCEIVGSPYYMAPEVLRR-------NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK  309 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~~-------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  309 (586)
                      .. ......|++.|+|||.+.+       .++.++|||||||++|+|++|..||...........+.......+....+.
T Consensus       155 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (286)
T cd06622         155 AS-LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSG  233 (286)
T ss_pred             CC-ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcc
Confidence            22 2233468889999999843       257899999999999999999999976655444333222111111222345


Q ss_pred             CCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          310 VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      ++.++.+||.+||..+|.+||++.+++.||||....
T Consensus       234 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~  269 (286)
T cd06622         234 YSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK  269 (286)
T ss_pred             cCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence            889999999999999999999999999999997653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=1.3e-40  Score=326.08  Aligned_cols=252  Identities=29%  Similarity=0.494  Sum_probs=220.2

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|++.+.||.|+||.||.+++..+++.+++|.+....... .....+.+|+.+++++ +||||+++++++.+...++++|
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~~~   78 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSE-KERRDALNEIVILSLL-QHPNIIAYYNHFMDDNTLLIEM   78 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccch-hHHHHHHHHHHHHHhC-CCCCeeEEEeEEecCCeEEEEE
Confidence            5899999999999999999999999999999987654332 3346788999999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          162 ELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       162 E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||++++|.+++...  ..+++..+..++.|++.+|.|||+.|++||||+|+||++   +..+.+||+|||++.......
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~---~~~~~~kl~d~~~~~~~~~~~  155 (256)
T cd08221          79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFL---TKAGLIKLGDFGISKILGSEY  155 (256)
T ss_pred             EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEE---eCCCCEEECcCcceEEccccc
Confidence            999999999998764  468999999999999999999999999999999999999   567789999999987664333


Q ss_pred             -ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          240 -QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       240 -~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                       ......|++.|+|||++.+ .++.++|||||||++|+|++|..||......+....+..+......   ..++..+.++
T Consensus       156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  232 (256)
T cd08221         156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVV---SVYSSELISL  232 (256)
T ss_pred             ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCc---cccCHHHHHH
Confidence             2334678999999999864 5788999999999999999999999988888877777766544322   4678999999


Q ss_pred             HHHccCCCCCCCCCHHHHhcCCCc
Q 043828          318 VKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       318 i~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      |.+||.++|.+||++.++++|||+
T Consensus       233 i~~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         233 VHSLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             HHHHcccCcccCCCHHHHhhCcCC
Confidence            999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=4.2e-41  Score=358.97  Aligned_cols=263  Identities=21%  Similarity=0.273  Sum_probs=195.7

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCC-cEEEEE--------------EeeccccCChhcHHHHHHHHHHHHhCCCC
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETG-ETYACK--------------KIAKEKLKTEIDIDDVRREVEIMRHLPKH  141 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~-~~~avK--------------~i~~~~~~~~~~~~~~~~Ei~~l~~l~~h  141 (586)
                      ..+.++|++++.||+|+||+||+|...... ...+.|              ++.+...........+.+|+.+|+++ +|
T Consensus       144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l-~H  222 (501)
T PHA03210        144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRL-NH  222 (501)
T ss_pred             hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhC-CC
Confidence            345679999999999999999998754322 222222              11111111222345688999999999 89


Q ss_pred             CCeeEEEEEEEeCCeEEEEEeccCCCChHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEee
Q 043828          142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK-----GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA  216 (586)
Q Consensus       142 pnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~  216 (586)
                      ||||++++++...+..|+|+|++. ++|..++...     .......+..++.||+.||.|||++||+||||||+|||+ 
T Consensus       223 pnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl-  300 (501)
T PHA03210        223 ENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFL-  300 (501)
T ss_pred             CCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE-
Confidence            999999999999999999999995 5777776542     223466788899999999999999999999999999999 


Q ss_pred             cCCCCCceEEeecccccccCCCCc--eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCC-C--CHHH
Q 043828          217 DGSENSQLKAIDFGLSIFFKPGEQ--FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWA-E--TEEG  290 (586)
Q Consensus       217 ~~~~~~~vkl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~-~--~~~~  290 (586)
                        +..+.+||+|||++........  ....+||+.|+|||++. ..|+.++|||||||++|+|++|..|+.. .  ....
T Consensus       301 --~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~  378 (501)
T PHA03210        301 --NCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGK  378 (501)
T ss_pred             --CCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHH
Confidence              5678999999999987643322  23467999999999986 4689999999999999999998765432 2  2222


Q ss_pred             HHHHHHhCc----cCCCCC------------------------CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCcc
Q 043828          291 IAHAIIRGK----IDFERD------------------------PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK  342 (586)
Q Consensus       291 ~~~~i~~~~----~~~~~~------------------------~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~  342 (586)
                      ....+....    ..++..                        ....++..+.++|.+||+.||.+|||+.|+|.||||.
T Consensus       379 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~  458 (501)
T PHA03210        379 QLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFS  458 (501)
T ss_pred             HHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhh
Confidence            222221110    001100                        0013566788999999999999999999999999998


Q ss_pred             CC
Q 043828          343 ND  344 (586)
Q Consensus       343 ~~  344 (586)
                      ..
T Consensus       459 ~~  460 (501)
T PHA03210        459 AE  460 (501)
T ss_pred             cC
Confidence            64

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=6e-41  Score=334.19  Aligned_cols=257  Identities=26%  Similarity=0.423  Sum_probs=209.5

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEE----
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYE----  152 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~----  152 (586)
                      ....++|++.+.||+|+||.||+|.+..+++.+|+|++.....    ....+.+|+.+++.+.+||||+++++++.    
T Consensus        14 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~   89 (286)
T cd06638          14 PDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD----IDEEIEAEYNILKALSDHPNVVKFYGMYYKKDV   89 (286)
T ss_pred             CCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc----hHHHHHHHHHHHHHHhcCCCeeeeeeeeeeccc
Confidence            3456799999999999999999999999999999998754321    12567889999999977999999999873    


Q ss_pred             -eCCeEEEEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEe
Q 043828          153 -DKDAIYLVMELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI  227 (586)
Q Consensus       153 -~~~~~~iv~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~  227 (586)
                       .+..+++||||++|++|.+++..    ...+++..++.++.|++.||.|||+++|+||||||+||++   ...+.++|+
T Consensus        90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili---~~~~~~kl~  166 (286)
T cd06638          90 KNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILL---TTEGGVKLV  166 (286)
T ss_pred             CCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEE---CCCCCEEEc
Confidence             44679999999999999887753    3468899999999999999999999999999999999999   556789999


Q ss_pred             ecccccccCCCC-ceecccCCccccchhhhh------ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc
Q 043828          228 DFGLSIFFKPGE-QFCEIVGSPYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI  300 (586)
Q Consensus       228 Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~l~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~  300 (586)
                      |||++....... ......|++.|+|||++.      ..++.++||||+||++|+|++|..||...........+.....
T Consensus       167 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~  246 (286)
T cd06638         167 DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPP  246 (286)
T ss_pred             cCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCC
Confidence            999987654322 223457899999999874      2478899999999999999999999987765444333322211


Q ss_pred             CCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       301 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                       ........++..+.+||.+||+.||++|||+.++++||||
T Consensus       247 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         247 -PTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             -CcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence             1111112357889999999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=6.7e-41  Score=328.09  Aligned_cols=251  Identities=28%  Similarity=0.467  Sum_probs=213.6

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||.|+||.||+|.+..++..+++|.+.....     .+.+.+|+.+++++ +||||+++++++.....+|++
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~   76 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-----LQEIIKEISILKQC-DSPYIVKYYGSYFKNTDLWIV   76 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-----HHHHHHHHHHHHhC-CCCcEeeeeeeeecCCcEEEE
Confidence            579999999999999999999988899999999865421     57889999999999 999999999999999999999


Q ss_pred             EeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      +||+++++|.+++.. ...+++..+..++.|++.||.|||+.+|+||||+|+||++   +..+.++|+|||++.......
T Consensus        77 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~---~~~~~~~l~dfg~~~~~~~~~  153 (256)
T cd06612          77 MEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILL---NEEGQAKLADFGVSGQLTDTM  153 (256)
T ss_pred             EecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---CCCCcEEEcccccchhcccCc
Confidence            999999999999875 4568999999999999999999999999999999999999   567789999999988765433


Q ss_pred             -ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          240 -QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       240 -~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                       ......|+..|+|||++.+ .++.++|||||||++|+|++|..||...........+...... .......++..+.++
T Consensus       154 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  232 (256)
T cd06612         154 AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPP-TLSDPEKWSPEFNDF  232 (256)
T ss_pred             cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCC-CCCchhhcCHHHHHH
Confidence             2334568899999999864 5788999999999999999999999876655444333222111 111123467899999


Q ss_pred             HHHccCCCCCCCCCHHHHhcCCCc
Q 043828          318 VKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       318 i~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      |.+||+.||.+|||+.++|.||||
T Consensus       233 i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         233 VKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             HHHHHhcChhhCcCHHHHhcCCCC
Confidence            999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=7.7e-41  Score=337.25  Aligned_cols=260  Identities=31%  Similarity=0.472  Sum_probs=213.8

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC--Ce
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK--DA  156 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~--~~  156 (586)
                      ..++|++.+.||.|+||.||+|.+..+|+.||+|++........ ....+.+|+.+++++ +||||+++++++...  +.
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~   82 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDG-IPISSLREITLLLNL-RHPNIVELKEVVVGKHLDS   82 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCC-CcchhhHHHHHHHhC-CCCCCcceEEEEecCCCCe
Confidence            45789999999999999999999999999999999875543222 123456799999999 899999999998755  57


Q ss_pred             EEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      +|+||||+.+ +|.+++.. ...+++..+..++.||+.||.|||+.|++||||||+||++   +..+.+||+|||++...
T Consensus        83 ~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~kL~dfg~~~~~  158 (309)
T cd07845          83 IFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLL---TDKGCLKIADFGLARTY  158 (309)
T ss_pred             EEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECccceeeec
Confidence            8999999964 78887765 4668999999999999999999999999999999999999   56789999999999876


Q ss_pred             CCCC-ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc------------
Q 043828          236 KPGE-QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI------------  300 (586)
Q Consensus       236 ~~~~-~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~------------  300 (586)
                      .... ......+++.|+|||++.+  .++.++|||||||++|+|++|.+||...+.......+.....            
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (309)
T cd07845         159 GLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSD  238 (309)
T ss_pred             CCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhc
Confidence            5332 2233456788999999853  578899999999999999999999998888777666554211            


Q ss_pred             -------CCCCCC-------CCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          301 -------DFERDP-------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       301 -------~~~~~~-------~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                             ..+..+       ....++.+.+||.+||..||++|||+.+++.||||+..
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~  296 (309)
T cd07845         239 LPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEK  296 (309)
T ss_pred             ccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccC
Confidence                   111111       12357889999999999999999999999999999854

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=9.4e-41  Score=330.23  Aligned_cols=256  Identities=26%  Similarity=0.441  Sum_probs=213.8

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCC-------hhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-------EIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~-------~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      +|.+.+.||.|+||.||+|.+..+|+.+|+|.+.......       ....+.+.+|+.+++.+ +||||+++++++...
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~   80 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL-DHLNIVQYLGFETTE   80 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc-CCCCcceEEEEeccC
Confidence            6899999999999999999998899999999886432111       11235678899999999 899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          155 DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      +.+++||||+++++|.+++...+.+++..+..++.|++.||.|||+++++||||+|+||++   +.++.++|+|||++..
T Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~---~~~~~~~l~d~~~~~~  157 (272)
T cd06629          81 EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLV---DADGICKISDFGISKK  157 (272)
T ss_pred             CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEE---cCCCeEEEeecccccc
Confidence            9999999999999999999888889999999999999999999999999999999999999   5678999999999876


Q ss_pred             cCCCC---ceecccCCccccchhhhhc---cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhC--ccCCCCCC
Q 043828          235 FKPGE---QFCEIVGSPYYMAPEVLRR---NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRG--KIDFERDP  306 (586)
Q Consensus       235 ~~~~~---~~~~~~gt~~y~aPE~l~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~  306 (586)
                      .....   ......|+..|+|||.+..   .++.++|+||||+++|+|++|..||...........+...  ...++...
T Consensus       158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (272)
T cd06629         158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDV  237 (272)
T ss_pred             ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccc
Confidence            53221   1233568899999999853   3788999999999999999999999765554434333322  22233333


Q ss_pred             CCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       307 ~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      .+.++..+.++|.+||.++|.+|||++++|+||||
T Consensus       238 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         238 SMNLSPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             cccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            45678999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=5.6e-41  Score=336.49  Aligned_cols=259  Identities=32%  Similarity=0.478  Sum_probs=213.9

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCC--hhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT--EIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +|++.+.||.|+||.||+|.+..+|+.||+|++.......  ......+..|+.+++.+ +||||+++++++.+.+.+++
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l   79 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL-KHPNIIGLLDVFGHKSNINL   79 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhc-CCCCChhhhheeecCCEEEE
Confidence            5889999999999999999998899999999997664331  12234567899999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||+ +++|.+++.... .+++..+..++.||+.||.|||++||+|+||+|+||++   +.++.++|+|||++......
T Consensus        80 v~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill---~~~~~~~l~dfg~~~~~~~~  155 (298)
T cd07841          80 VFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLI---ASDGVLKLADFGLARSFGSP  155 (298)
T ss_pred             EEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEE---cCCCCEEEccceeeeeccCC
Confidence            99999 889999998765 79999999999999999999999999999999999999   56789999999999766433


Q ss_pred             -CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCC-----------
Q 043828          239 -EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER-----------  304 (586)
Q Consensus       239 -~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~-----------  304 (586)
                       .......+++.|+|||.+.+  .++.++|||||||++|+|++|.+||...+.......+.........           
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (298)
T cd07841         156 NRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPD  235 (298)
T ss_pred             CccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccc
Confidence             22233457889999999853  5788999999999999999998888776655544444321100000           


Q ss_pred             -------------CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          305 -------------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       305 -------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                                   ..+...+..+.+||.+||.+||++|||+.+++.||||++..
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~  289 (298)
T cd07841         236 YVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDP  289 (298)
T ss_pred             cccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCC
Confidence                         01234578899999999999999999999999999998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=5.4e-41  Score=334.47  Aligned_cols=255  Identities=32%  Similarity=0.534  Sum_probs=213.1

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|++.+.||.|+||.||+|.+..+|..||+|++....... .....+.+|+.+++++ +||||+++++++.....+|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~   78 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG-GIPNQALREIKALQAC-QHPYVVKLLDVFPHGSGFVLVM   78 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccc-hhhHHHHHHHHHHHhC-CCCCCcceeeEEecCCeeEEEe
Confidence            5899999999999999999999999999999987654322 2346788999999999 7999999999999999999999


Q ss_pred             eccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-
Q 043828          162 ELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-  239 (586)
Q Consensus       162 E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-  239 (586)
                      ||+ +++|.+++.. ...+++..++.++.||+.||.|||+.||+|+||||+||++   +..+.++|+|||++....... 
T Consensus        79 e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~---~~~~~~~l~dfg~~~~~~~~~~  154 (286)
T cd07832          79 EYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLI---SADGVLKIADFGLARLFSEEEP  154 (286)
T ss_pred             ccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEE---cCCCcEEEeeeeecccccCCCC
Confidence            999 9999998865 4568999999999999999999999999999999999999   567889999999988764332 


Q ss_pred             -ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc----------------
Q 043828          240 -QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI----------------  300 (586)
Q Consensus       240 -~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~----------------  300 (586)
                       ......|+..|+|||++.+  .++.++||||+||++|+|++|.+||.+.+.......+.....                
T Consensus       155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (286)
T cd07832         155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDY  234 (286)
T ss_pred             CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchh
Confidence             2334578999999998753  468899999999999999999988877766554444332110                


Q ss_pred             ---CCCC-------CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCcc
Q 043828          301 ---DFER-------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK  342 (586)
Q Consensus       301 ---~~~~-------~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~  342 (586)
                         .++.       ..++..+..+.+||.+||..+|.+|||++++|.||||.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         235 NKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             hcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence               1110       01235678999999999999999999999999999984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=5.1e-41  Score=331.32  Aligned_cols=258  Identities=27%  Similarity=0.447  Sum_probs=211.4

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCC---hhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT---EIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~---~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      +|+..+.||+|+||.||+|.+..+++.+|+|++.......   ......+.+|+.+++++ +||||+++++++.+.+.++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~   79 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL-NHPHIIRMLGATCEDSHFN   79 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHc-CCCceehhhceeccCCeEE
Confidence            4888999999999999999999999999999987543221   22346788999999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      +||||++|++|.+++...+.+++..+..++.|++.||.|||++|++|+||+|+||+++  .....+||+|||.+......
T Consensus        80 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~--~~~~~~~l~dfg~~~~~~~~  157 (268)
T cd06630          80 LFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLID--STGQRLRIADFGAAARLAAK  157 (268)
T ss_pred             EEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--CCCCEEEEcccccccccccc
Confidence            9999999999999998888899999999999999999999999999999999999994  22346999999998765432


Q ss_pred             C-----ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhC-ccCCCCCCCCCCC
Q 043828          239 E-----QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRG-KIDFERDPWPKVS  311 (586)
Q Consensus       239 ~-----~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~  311 (586)
                      .     ......|+..|+|||.+. ..++.++||||+||++|+|++|..||...........+... .........+.++
T Consensus       158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (268)
T cd06630         158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLS  237 (268)
T ss_pred             cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhC
Confidence            1     112346788999999986 46788999999999999999999999654332222222111 1111122223578


Q ss_pred             HHHHHHHHHccCCCCCCCCCHHHHhcCCCcc
Q 043828          312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIK  342 (586)
Q Consensus       312 ~~~~~li~~~L~~dp~~Rps~~eil~hp~~~  342 (586)
                      +.+.+++.+||..+|.+|||+.++++||||+
T Consensus       238 ~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         238 PGLRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence            9999999999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=1e-40  Score=334.10  Aligned_cols=258  Identities=27%  Similarity=0.409  Sum_probs=209.2

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe----
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA----  156 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~----  156 (586)
                      ++|++.+.||.|+||.||+|.+..+|+.||+|++...... ......+.+|+.+++.+.+||||+++++++.....    
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~   79 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE-EGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP   79 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc-cCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence            4799999999999999999999999999999998654322 22235678899999999778999999999987665    


Q ss_pred             -EEEEEeccCCCChHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecc
Q 043828          157 -IYLVMELCEGGELFDRIVNK-----GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG  230 (586)
Q Consensus       157 -~~iv~E~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg  230 (586)
                       +|+||||+++ +|.+++...     ..+++..++.++.||+.||.|||++||+||||+|+||+++.  .++.+||+|||
T Consensus        80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~--~~~~~kl~dfg  156 (295)
T cd07837          80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK--QKGLLKIADLG  156 (295)
T ss_pred             eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec--CCCeEEEeecc
Confidence             8999999986 788877642     35799999999999999999999999999999999999942  26789999999


Q ss_pred             cccccCCC-CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCC---
Q 043828          231 LSIFFKPG-EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER---  304 (586)
Q Consensus       231 ~a~~~~~~-~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~---  304 (586)
                      ++...... .......+++.|+|||++.+  .++.++|||||||++|+|++|..||.+.+.......+.........   
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (295)
T cd07837         157 LGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVW  236 (295)
T ss_pred             cceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhC
Confidence            98765322 22233457889999998853  4788999999999999999999999887765554444332110000   


Q ss_pred             ---------------------CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCcc
Q 043828          305 ---------------------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK  342 (586)
Q Consensus       305 ---------------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~  342 (586)
                                           ...+.++..+.+||.+||.+||.+|||+.+++.||||+
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         237 PGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             cchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence                                 01245788999999999999999999999999999995

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-42  Score=328.12  Aligned_cols=259  Identities=28%  Similarity=0.470  Sum_probs=209.5

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCC-C----CeeEEEEEEEe
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH-P----NIVTYKEAYED  153 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~h-p----nIv~l~~~~~~  153 (586)
                      +..+|.++..+|+|+||.|-.|.+..++..||+|+++...    ...+...-|+.+|.++..+ |    .+|++.+||..
T Consensus        87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~----kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdy  162 (415)
T KOG0671|consen   87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD----KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDY  162 (415)
T ss_pred             cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH----HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhc
Confidence            4679999999999999999999999999999999986442    2345667799999999332 3    48899999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCC------------
Q 043828          154 KDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS------------  219 (586)
Q Consensus       154 ~~~~~iv~E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~------------  219 (586)
                      .++.|||+|.+ |.++++++.++.  +++...++.+++||+.++++||+.+++|.||||+|||+.+..            
T Consensus       163 rghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~  241 (415)
T KOG0671|consen  163 RGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVC  241 (415)
T ss_pred             cCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccc
Confidence            99999999998 779999998754  689999999999999999999999999999999999996421            


Q ss_pred             -----CCCceEEeecccccccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHH--
Q 043828          220 -----ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGI--  291 (586)
Q Consensus       220 -----~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--  291 (586)
                           .+..|+|+|||.|+....  ....++.|..|+|||++.+ +++.++||||+||||+|+++|...|+.....+.  
T Consensus       242 ~~r~~ks~~I~vIDFGsAtf~~e--~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLa  319 (415)
T KOG0671|consen  242 FIRPLKSTAIKVIDFGSATFDHE--HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLA  319 (415)
T ss_pred             eeccCCCcceEEEecCCcceecc--CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHH
Confidence                 245699999999987543  3367789999999999865 899999999999999999999999988765542  


Q ss_pred             -HHHHHh------------------CccCCCCCCCCC---------------------CCHHHHHHHHHccCCCCCCCCC
Q 043828          292 -AHAIIR------------------GKIDFERDPWPK---------------------VSKEAKELVKNMLDPNPYNRLT  331 (586)
Q Consensus       292 -~~~i~~------------------~~~~~~~~~~~~---------------------~~~~~~~li~~~L~~dp~~Rps  331 (586)
                       .+.|..                  +.+.++...-.+                     .-..+.|||++||..||.+|+|
T Consensus       320 MMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiT  399 (415)
T KOG0671|consen  320 MMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRIT  399 (415)
T ss_pred             HHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcccccc
Confidence             222221                  111111000000                     1135889999999999999999


Q ss_pred             HHHHhcCCCccCC
Q 043828          332 LEEVLENPWIKND  344 (586)
Q Consensus       332 ~~eil~hp~~~~~  344 (586)
                      +.|+|.||||+..
T Consensus       400 l~EAL~HpFF~~~  412 (415)
T KOG0671|consen  400 LREALSHPFFARL  412 (415)
T ss_pred             HHHHhcCHHhhcC
Confidence            9999999999853

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=1.5e-40  Score=325.75  Aligned_cols=252  Identities=29%  Similarity=0.580  Sum_probs=217.8

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|++.+.||+|+||.||++.+..+|+.||+|.+....... .....+.+|+.+++++ +||||+++++++...+..|+||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSP-KEREESRKEVAVLSNM-KHPNIVQYQESFEENGNLYIVM   78 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCCh-HHHHHHHHHHHHHHhC-CCCCeeeeEeeecCCCeEEEEE
Confidence            5899999999999999999999999999999987654332 2346788999999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          162 ELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       162 E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      ||+++++|.+++....  .+++..+..++.|++.||.|||+++++|+||+|+||++   +.++.++|+|||++.......
T Consensus        79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~---~~~~~~~l~d~~~~~~~~~~~  155 (256)
T cd08218          79 DYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL---TKDGTIKLGDFGIARVLNSTV  155 (256)
T ss_pred             ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEEeeccceeecCcch
Confidence            9999999999887643  57899999999999999999999999999999999999   567789999999987654332


Q ss_pred             c-eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          240 Q-FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       240 ~-~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                      . .....|++.|+|||++. +.++.++|+|||||++|+|++|..||......+....+..+.....   ...++..+.++
T Consensus       156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l  232 (256)
T cd08218         156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPV---SSHYSYDLRNL  232 (256)
T ss_pred             hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCC---cccCCHHHHHH
Confidence            2 22346889999999986 4578899999999999999999999988887777777766654321   23578999999


Q ss_pred             HHHccCCCCCCCCCHHHHhcCCCc
Q 043828          318 VKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       318 i~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      |.+||+.+|.+||++.++++||||
T Consensus       233 i~~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         233 VSQLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             HHHHhhCChhhCcCHHHHhhCcCC
Confidence            999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=7e-41  Score=333.02  Aligned_cols=253  Identities=28%  Similarity=0.480  Sum_probs=210.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEE------e
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYE------D  153 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~------~  153 (586)
                      .+.|++.+.||.|+||.||+|.+..+++.+|+|++....    .....+..|+.+++++.+||||+++++++.      .
T Consensus        15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   90 (282)
T cd06636          15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH   90 (282)
T ss_pred             hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence            368999999999999999999999999999999986542    223568889999999878999999999985      3


Q ss_pred             CCeEEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          154 KDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       154 ~~~~~iv~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                      ...+|++|||+++|+|.+++...  ..+++..+..++.||+.||.|||+.||+||||+|+||++   +..+.++|+|||+
T Consensus        91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili---~~~~~~~l~dfg~  167 (282)
T cd06636          91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLL---TENAEVKLVDFGV  167 (282)
T ss_pred             CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCcc
Confidence            46789999999999999988753  458899999999999999999999999999999999999   5677899999999


Q ss_pred             ccccCCC-CceecccCCccccchhhhh------ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCC
Q 043828          232 SIFFKPG-EQFCEIVGSPYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER  304 (586)
Q Consensus       232 a~~~~~~-~~~~~~~gt~~y~aPE~l~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~  304 (586)
                      +...... .......|++.|+|||.+.      ..++.++|||||||++|+|++|..||...........+.....  +.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~--~~  245 (282)
T cd06636         168 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPP--PK  245 (282)
T ss_pred             hhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCC--CC
Confidence            8765322 2233457899999999874      2478899999999999999999999977665544443333221  11


Q ss_pred             CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          305 DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       305 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      .....++..+.+||.+||..||.+|||+.|+|+||||
T Consensus       246 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         246 LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             CcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            1223578999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-41  Score=316.34  Aligned_cols=261  Identities=26%  Similarity=0.513  Sum_probs=236.5

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      --+++|.+++.||+|+|++|..++.+.|.+.||+|+++++.++...+++-++.|-.+..+-++||.+|.++.+|+.++.+
T Consensus       247 l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrl  326 (593)
T KOG0695|consen  247 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRL  326 (593)
T ss_pred             cccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceE
Confidence            34679999999999999999999999999999999999998888888888999999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc-cC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF-FK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~-~~  236 (586)
                      ++|.||++||+|.-.+++.++++++.++.+...|+.||.|||+.||++||||.+|+|+   +..+++||.|+|+++. +.
T Consensus       327 ffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvll---daeghikltdygmcke~l~  403 (593)
T KOG0695|consen  327 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLL---DAEGHIKLTDYGMCKEGLG  403 (593)
T ss_pred             EEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEE---ccCCceeecccchhhcCCC
Confidence            9999999999998888888999999999999999999999999999999999999999   7889999999999975 45


Q ss_pred             CCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCC--------CCCHHHHHHHHHhCccCCCCCCC
Q 043828          237 PGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFW--------AETEEGIAHAIIRGKIDFERDPW  307 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~--------~~~~~~~~~~i~~~~~~~~~~~~  307 (586)
                      ++....+.+|||.|.|||++++ .|+..+|+|+|||++|||+.|+.||.        .++.+-+.+.|....+..|.   
T Consensus       404 ~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiripr---  480 (593)
T KOG0695|consen  404 PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPR---  480 (593)
T ss_pred             CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccc---
Confidence            6777788999999999999985 69999999999999999999999994        23455567777777777765   


Q ss_pred             CCCCHHHHHHHHHccCCCCCCCC------CHHHHhcCCCccCCC
Q 043828          308 PKVSKEAKELVKNMLDPNPYNRL------TLEEVLENPWIKNDN  345 (586)
Q Consensus       308 ~~~~~~~~~li~~~L~~dp~~Rp------s~~eil~hp~~~~~~  345 (586)
                       .+|-.+..+++..|++||.+|.      .+.++..||||+...
T Consensus       481 -slsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~id  523 (593)
T KOG0695|consen  481 -SLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSID  523 (593)
T ss_pred             -eeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCC
Confidence             3677788899999999999997      568999999999653

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=1.6e-40  Score=327.00  Aligned_cols=254  Identities=27%  Similarity=0.501  Sum_probs=214.8

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|++.+.||+|+||.||+|.+..+++.||+|.+...... ......+.+|+.+++.+ +||||+++++++...+.+++|+
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~lv~   78 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELL-KHPNLVKYYGVEVHREKVYIFM   78 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhC-CCCChhheeeeEecCCEEEEEE
Confidence            589999999999999999999889999999998766433 33567899999999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCc-
Q 043828          162 ELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ-  240 (586)
Q Consensus       162 E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~-  240 (586)
                      ||+++++|.+++.....+++..+..++.|++.||.|||+.||+|+||+|+||++   +..+.+||+|||++........ 
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~---~~~~~~kl~d~g~~~~~~~~~~~  155 (264)
T cd06626          79 EYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFL---DHNGVIKLGDFGCAVKLKNNTTT  155 (264)
T ss_pred             ecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEcccccccccCCCCCc
Confidence            999999999999887779999999999999999999999999999999999999   5678999999999877643322 


Q ss_pred             ----eecccCCccccchhhhhc-c---CCCcchHHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHhCccCCCCCCCCCCC
Q 043828          241 ----FCEIVGSPYYMAPEVLRR-N---YGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAIIRGKIDFERDPWPKVS  311 (586)
Q Consensus       241 ----~~~~~gt~~y~aPE~l~~-~---~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~  311 (586)
                          .....+++.|+|||++.. .   ++.++||||||+++|+|++|..||..... ......+.. ......+.+..++
T Consensus       156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  234 (264)
T cd06626         156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GHKPPIPDSLQLS  234 (264)
T ss_pred             ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CCCCCCCcccccC
Confidence                123567889999999863 3   68899999999999999999999976533 222222222 2222223344568


Q ss_pred             HHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          312 KEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       312 ~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      ..+.+||.+||+.+|.+|||+.+++.|||+
T Consensus       235 ~~~~~li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         235 PEGKDFLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            999999999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=3.6e-41  Score=335.79  Aligned_cols=256  Identities=28%  Similarity=0.488  Sum_probs=212.5

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++....... ...+.+.+|+.+++.+ +||||+++++++..+..+|+|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv   78 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQL-RHENLVNLIEVFRRKKRLYLV   78 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhc-CCcchhhHHHhcccCCeEEEE
Confidence            47999999999999999999998899999999986543322 2345678899999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC-C
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-E  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~  239 (586)
                      |||+++++|..+......+++..+..++.|++.||.|||+.+|+||||+|+||++   +.++.++|+|||++...... .
T Consensus        79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~---~~~~~~~l~dfg~~~~~~~~~~  155 (286)
T cd07846          79 FEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGE  155 (286)
T ss_pred             EecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---CCCCcEEEEeeeeeeeccCCcc
Confidence            9999999888877666679999999999999999999999999999999999999   56789999999998765433 2


Q ss_pred             ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc-----------------
Q 043828          240 QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI-----------------  300 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~-----------------  300 (586)
                      ......++..|+|||++.+  .++.++|||||||++|+|++|.+||...+.......+.....                 
T Consensus       156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (286)
T cd07846         156 VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFA  235 (286)
T ss_pred             ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhh
Confidence            2234568899999999863  467899999999999999999999987665443333321100                 


Q ss_pred             --CCCC--------CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          301 --DFER--------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       301 --~~~~--------~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                        ..+.        ..++.++..+.+|+.+||..+|.+||++.+++.||||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         236 GMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             ccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence              0000        1134678899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=2.2e-40  Score=326.36  Aligned_cols=255  Identities=27%  Similarity=0.484  Sum_probs=211.3

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccC--ChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC--Ce
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK--TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK--DA  156 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~--~~  156 (586)
                      .+|++.+.||+|+||.||.|.+..+|..||+|.+......  .......+.+|+.+++++ +||||+++++++.+.  ..
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~   80 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-LHERIVQYYGCLRDPMERT   80 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-CCCCeeeEEeEeccCCCce
Confidence            4799999999999999999999999999999998643221  223356788999999999 899999999998763  56


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +++||||+++++|.+++.....+++..+..++.|++.||.|||+++|+|+||||+||++   +.++.++|+|||++....
T Consensus        81 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~---~~~~~~~l~Dfg~~~~~~  157 (265)
T cd06652          81 LSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILR---DSVGNVKLGDFGASKRLQ  157 (265)
T ss_pred             EEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEe---cCCCCEEECcCccccccc
Confidence            88999999999999999887788999999999999999999999999999999999999   567889999999987543


Q ss_pred             CC----CceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCC
Q 043828          237 PG----EQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS  311 (586)
Q Consensus       237 ~~----~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  311 (586)
                      ..    .......|+..|+|||.+. ..++.++|||||||++|+|++|..||...........+......  ....+.++
T Consensus       158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~  235 (265)
T cd06652         158 TICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN--PVLPPHVS  235 (265)
T ss_pred             cccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCC--CCCchhhC
Confidence            21    1223356889999999985 45788999999999999999999999876555444443322211  11123577


Q ss_pred             HHHHHHHHHccCCCCCCCCCHHHHhcCCCcc
Q 043828          312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIK  342 (586)
Q Consensus       312 ~~~~~li~~~L~~dp~~Rps~~eil~hp~~~  342 (586)
                      ..+.++|.+||. +|.+||+++++++|||+.
T Consensus       236 ~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         236 DHCRDFLKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             HHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence            889999999995 899999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=8.9e-41  Score=338.12  Aligned_cols=249  Identities=27%  Similarity=0.461  Sum_probs=191.7

Q ss_pred             cceeccCCceEEEEEEEcc--CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEE--eCCeEEEEE
Q 043828           86 GKELGRGEFGITHQCFEIE--TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYE--DKDAIYLVM  161 (586)
Q Consensus        86 ~~~lG~G~~g~V~~~~~~~--~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~--~~~~~~iv~  161 (586)
                      +.+||+|+||.||+|....  ++..||+|.+.....     ...+.+|+.+++.+ +||||+++++++.  .+..+|+||
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-----~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~   79 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-----SMSACREIALLREL-KHPNVIALQKVFLSHSDRKVWLLF   79 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-----cHHHHHHHHHHHhC-CCCCeeeEEEEEeccCCCeEEEEE
Confidence            3579999999999998653  567899998865432     24577899999999 8999999999985  356789999


Q ss_pred             eccCCCChHHHHHh---------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecC-CCCCceEEeeccc
Q 043828          162 ELCEGGELFDRIVN---------KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADG-SENSQLKAIDFGL  231 (586)
Q Consensus       162 E~~~gg~L~~~l~~---------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~-~~~~~vkl~Dfg~  231 (586)
                      ||+.+ +|.+++..         ...+++..+..++.||+.||.|||+.+|+||||||+|||+... +..+.+||+|||+
T Consensus        80 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~  158 (317)
T cd07867          80 DYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF  158 (317)
T ss_pred             eeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence            99964 77777642         1248899999999999999999999999999999999999532 3567899999999


Q ss_pred             ccccCCCC----ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHH---------HHHHHHH
Q 043828          232 SIFFKPGE----QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEE---------GIAHAII  296 (586)
Q Consensus       232 a~~~~~~~----~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---------~~~~~i~  296 (586)
                      +.......    ......||+.|+|||++.+  .++.++|||||||++|+|++|.+||......         .....+.
T Consensus       159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~  238 (317)
T cd07867         159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIF  238 (317)
T ss_pred             eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHH
Confidence            98654321    2234578999999999854  4789999999999999999999999653321         1111111


Q ss_pred             hCcc--------------CCC--------------------CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          297 RGKI--------------DFE--------------------RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       297 ~~~~--------------~~~--------------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      ....              .++                    .......+..+.+||.+||..||.+|||+.|+|+||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         239 SVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             HhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            0000              000                    00011235678899999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-40  Score=329.06  Aligned_cols=254  Identities=30%  Similarity=0.488  Sum_probs=212.1

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC----
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD----  155 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~----  155 (586)
                      .++|++.+.||.|++|.||+|.+..+++.+++|++.....    ..+.+.+|+.+++++.+||||+++++++....    
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   80 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED----EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN   80 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch----hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence            4789999999999999999999988999999999875432    23678899999999977999999999997644    


Q ss_pred             --eEEEEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeec
Q 043828          156 --AIYLVMELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDF  229 (586)
Q Consensus       156 --~~~iv~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Df  229 (586)
                        .+|+||||+++++|.+++..    ...+++..++.++.|++.||.|||+.+++|+||+|+||++   +.++.++|+||
T Consensus        81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~---~~~~~~~l~d~  157 (275)
T cd06608          81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILL---TKNAEVKLVDF  157 (275)
T ss_pred             ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE---ccCCeEEECCC
Confidence              48999999999999988865    3578999999999999999999999999999999999999   56788999999


Q ss_pred             ccccccCCC-CceecccCCccccchhhhhc------cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCC
Q 043828          230 GLSIFFKPG-EQFCEIVGSPYYMAPEVLRR------NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF  302 (586)
Q Consensus       230 g~a~~~~~~-~~~~~~~gt~~y~aPE~l~~------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~  302 (586)
                      |++...... .......|++.|+|||++..      .++.++|||||||++|+|++|.+||...........+.......
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  237 (275)
T cd06608         158 GVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPT  237 (275)
T ss_pred             ccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCC
Confidence            998765432 22234568999999998742      36788999999999999999999998766555555554443211


Q ss_pred             CCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          303 ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       303 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                       ......++..+++||.+||..||++|||+.++++|||+
T Consensus       238 -~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         238 -LKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             -CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence             11112367899999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=1.2e-40  Score=331.20  Aligned_cols=252  Identities=29%  Similarity=0.491  Sum_probs=206.9

Q ss_pred             eeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC--CeEEEE
Q 043828           83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK--DAIYLV  160 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~--~~~~iv  160 (586)
                      |++.+.||+|+||.||+|.+..+++.||+|++...... . ......+|+.+++++.+||||+++++++.+.  +.+++|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~-~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv   78 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKS-L-EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV   78 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCC-c-hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence            67889999999999999999999999999998654321 1 1123457899999996799999999999987  899999


Q ss_pred             EeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||++ ++|.+.+.. ...+++..+..++.|++.||.|||+.||+||||+|+||+++   . +.+||+|||++.......
T Consensus        79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~---~-~~~kl~dfg~~~~~~~~~  153 (282)
T cd07831          79 FELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK---D-DILKLADFGSCRGIYSKP  153 (282)
T ss_pred             EecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEc---C-CCeEEEecccccccccCC
Confidence            99997 488888776 35689999999999999999999999999999999999994   4 899999999998765444


Q ss_pred             ceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCc------------------
Q 043828          240 QFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK------------------  299 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~------------------  299 (586)
                      ......+++.|+|||.+.  +.++.++||||+||++|+|++|.+||.+.+..+....+....                  
T Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (282)
T cd07831         154 PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMN  233 (282)
T ss_pred             CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccccccc
Confidence            444556899999999864  346889999999999999999999998877655444443211                  


Q ss_pred             cCCCCC-------CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          300 IDFERD-------PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       300 ~~~~~~-------~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      ..++..       ..+.++..+.+||.+||.++|.+|||+++++.||||
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         234 YNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             ccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence            111110       013468899999999999999999999999999998

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=2.5e-40  Score=324.38  Aligned_cols=254  Identities=29%  Similarity=0.508  Sum_probs=215.7

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccC--ChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK--TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +|+..+.||+|++|.||+|....++..|++|.+......  .......+.+|+.+++.+ +||||+++++++.....+|+
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l   79 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-QHPNIVQYLGTEREEDNLYI   79 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc-CCCCchheeeeEecCCeEEE
Confidence            478889999999999999999889999999998654321  123346788999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |+||+++++|.+++.....+++..+..++.||+.||.|||+.||+|+||+|+||++   +..+.+||+|||.+.......
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~---~~~~~~kl~d~~~~~~~~~~~  156 (258)
T cd06632          80 FLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILV---DTNGVVKLADFGMAKQVVEFS  156 (258)
T ss_pred             EEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEccCccceeccccc
Confidence            99999999999999888789999999999999999999999999999999999999   567899999999987754443


Q ss_pred             ceecccCCccccchhhhhc-c-CCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          240 QFCEIVGSPYYMAPEVLRR-N-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~~-~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                      ......|++.|+|||.+.. . ++.++|+|||||++|+|++|..||...........+..... . ....+.+++.+.++
T Consensus       157 ~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l  234 (258)
T cd06632         157 FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKE-L-PPIPDHLSDEAKDF  234 (258)
T ss_pred             cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhccc-C-CCcCCCcCHHHHHH
Confidence            3345678999999998853 3 78899999999999999999999977665444444433111 1 11224578999999


Q ss_pred             HHHccCCCCCCCCCHHHHhcCCCc
Q 043828          318 VKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       318 i~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      +.+||..+|.+||++.+++.|||+
T Consensus       235 i~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         235 ILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             HHHHhhcCcccCcCHHHHhcCCCC
Confidence            999999999999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=1.6e-40  Score=330.48  Aligned_cols=257  Identities=25%  Similarity=0.370  Sum_probs=206.4

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|++.......  ....+..|+.++.+..+||||+++++++..++.+|+|
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv   78 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ--EQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC   78 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH--HHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence            37999999999999999999999999999999987653222  2345566777654544999999999999999999999


Q ss_pred             EeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          161 MELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHEN-GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      |||++ |+|.+++..    ...+++..++.++.|++.||.|||++ +++||||||+||++   +.++.+||+|||++...
T Consensus        79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~---~~~~~~kl~dfg~~~~~  154 (283)
T cd06617          79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLI---NRNGQVKLCDFGISGYL  154 (283)
T ss_pred             hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE---CCCCCEEEeeccccccc
Confidence            99996 578777654    34689999999999999999999997 99999999999999   56789999999998865


Q ss_pred             CCCCceecccCCccccchhhhh-----ccCCCcchHHHHHHHHHHHhhCCCCCCCCC-HHHHHHHHHhCccCCCCCCCCC
Q 043828          236 KPGEQFCEIVGSPYYMAPEVLR-----RNYGPEIDVWSAGVIIYILLCGVPPFWAET-EEGIAHAIIRGKIDFERDPWPK  309 (586)
Q Consensus       236 ~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~  309 (586)
                      ..........|+..|+|||.+.     ..++.++|+|||||++|+|++|..||.... ..+....+.....  +..+...
T Consensus       155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~  232 (283)
T cd06617         155 VDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPS--PQLPAEK  232 (283)
T ss_pred             ccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCC--CCCCccc
Confidence            4333333456889999999874     346889999999999999999999996432 2222222222211  1111235


Q ss_pred             CCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          310 VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      ++.++.+||.+||..+|.+||++.++++||||++..
T Consensus       233 ~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  268 (283)
T cd06617         233 FSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL  268 (283)
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence            789999999999999999999999999999998753

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=1.1e-40  Score=330.77  Aligned_cols=254  Identities=28%  Similarity=0.464  Sum_probs=215.6

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ..|+..+.||.|+||.||+|.+..++..+|+|++.....  ......+.+|+.+++++ +||||+++++++.++..+|+|
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv   80 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKGTKLWII   80 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEEE
Confidence            468889999999999999999998999999999875432  23356788999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCc
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ  240 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~  240 (586)
                      |||++|++|.+++.. ..+++..+..++.|++.||.|||+.+++|+||+|+||++   +..+.++|+|||++........
T Consensus        81 ~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~---~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06640          81 MEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             EecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEE---cCCCCEEEcccccceeccCCcc
Confidence            999999999998865 568999999999999999999999999999999999999   5677899999999876543321


Q ss_pred             -eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHH
Q 043828          241 -FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV  318 (586)
Q Consensus       241 -~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  318 (586)
                       .....++..|+|||++.+ .++.++|+|||||++|+|++|..||...........+.....   ......++..+.++|
T Consensus       157 ~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li  233 (277)
T cd06640         157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP---PTLTGEFSKPFKEFI  233 (277)
T ss_pred             ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCC---CCCchhhhHHHHHHH
Confidence             223467889999999864 578899999999999999999999988776655554433221   122235678899999


Q ss_pred             HHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          319 KNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       319 ~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .+||..+|.+||++.+++.||||.+.
T Consensus       234 ~~~l~~~p~~Rp~~~~il~~~~~~~~  259 (277)
T cd06640         234 DACLNKDPSFRPTAKELLKHKFIVKN  259 (277)
T ss_pred             HHHcccCcccCcCHHHHHhChHhhhc
Confidence            99999999999999999999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=1.1e-40  Score=333.43  Aligned_cols=256  Identities=32%  Similarity=0.485  Sum_probs=210.8

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC--CeE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK--DAI  157 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~--~~~  157 (586)
                      .++|++.+.||.|+||.||+|.+..+++.+|+|.+...... ......+.+|+.+++++ +||||+++++++...  ..+
T Consensus         4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~   81 (293)
T cd07843           4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKL-QHPNIVTVKEVVVGSNLDKI   81 (293)
T ss_pred             hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhc-CCCCEEEEEEEEEecCCCcE
Confidence            35799999999999999999999989999999999765433 22234567899999999 799999999999877  899


Q ss_pred             EEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      |+||||+++ +|.+++... ..+++..+..++.|++.||.|||+++|+||||||+||++   +.++.++|+|||++....
T Consensus        82 ~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~~l~d~g~~~~~~  157 (293)
T cd07843          82 YMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLL---NNRGILKICDFGLAREYG  157 (293)
T ss_pred             EEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE---CCCCcEEEeecCceeecc
Confidence            999999974 898888764 358999999999999999999999999999999999999   567899999999988664


Q ss_pred             CC-CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccC------------
Q 043828          237 PG-EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID------------  301 (586)
Q Consensus       237 ~~-~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~------------  301 (586)
                      .. .......+++.|+|||++.+  .++.++||||+||++|+|++|.+||...+.......+......            
T Consensus       158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (293)
T cd07843         158 SPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL  237 (293)
T ss_pred             CCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhcc
Confidence            43 22334567889999999864  3688999999999999999999999887766555444321100            


Q ss_pred             -------C-------CCCCCCC--CCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          302 -------F-------ERDPWPK--VSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       302 -------~-------~~~~~~~--~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                             +       ....++.  +++.+.+||.+||+.+|++|||+.|+|.||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence                   0       0011222  47889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=9.6e-41  Score=344.44  Aligned_cols=251  Identities=22%  Similarity=0.339  Sum_probs=204.4

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCC-----cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETG-----ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~-----~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      .++|++++.||+|+||.||+|++...|     ..||+|++......  ...+.+.+|+.+++.+.+|||||++++++...
T Consensus        37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~  114 (374)
T cd05106          37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT--DEREALMSELKILSHLGQHKNIVNLLGACTHG  114 (374)
T ss_pred             HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH--HHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence            468999999999999999999865443     57999998754322  23467889999999997899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhC----------------------------------------------------------
Q 043828          155 DAIYLVMELCEGGELFDRIVNK----------------------------------------------------------  176 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~----------------------------------------------------------  176 (586)
                      ..+|+|||||++|+|.+++...                                                          
T Consensus       115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (374)
T cd05106         115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS  194 (374)
T ss_pred             CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence            9999999999999999988542                                                          


Q ss_pred             ------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCce---
Q 043828          177 ------------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF---  241 (586)
Q Consensus       177 ------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~---  241 (586)
                                  .++++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.........   
T Consensus       195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~---~~~~~~kL~DfGla~~~~~~~~~~~~  271 (374)
T cd05106         195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLL---TDGRVAKICDFGLARDIMNDSNYVVK  271 (374)
T ss_pred             ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEE---eCCCeEEEeeceeeeeccCCcceeec
Confidence                        236788899999999999999999999999999999999   45778999999998765432211   


Q ss_pred             ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHH
Q 043828          242 CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK  319 (586)
Q Consensus       242 ~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  319 (586)
                      ....+++.|+|||++. ..++.++|||||||++|+|++ |..||...........+.........+  ..+++++.++|.
T Consensus       272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~  349 (374)
T cd05106         272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRP--DFAPPEIYSIMK  349 (374)
T ss_pred             cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCC--CCCCHHHHHHHH
Confidence            1223556799999985 568999999999999999997 999998765544444444433322222  346899999999


Q ss_pred             HccCCCCCCCCCHHHHhc
Q 043828          320 NMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       320 ~~L~~dp~~Rps~~eil~  337 (586)
                      +||+.||.+|||+.++++
T Consensus       350 ~cl~~dp~~RPs~~~l~~  367 (374)
T cd05106         350 MCWNLEPTERPTFSQISQ  367 (374)
T ss_pred             HHcCCChhhCcCHHHHHH
Confidence            999999999999999976

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=9.7e-41  Score=333.04  Aligned_cols=258  Identities=23%  Similarity=0.343  Sum_probs=208.2

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|...+.||+|+||.||++.+..+|+.+|+|.+......  .....+.+|+.++.++.+||||+++++++..+...+++
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~   81 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWIC   81 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEE
Confidence            4677888999999999999999999999999998765332  33467889999999996699999999999999999999


Q ss_pred             EeccCCCChHHHH---H--hCCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          161 MELCEGGELFDRI---V--NKGHYTERAAAAVGKTILRIVKVCHEN-GVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       161 ~E~~~gg~L~~~l---~--~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      |||+.+ +|.++.   .  ....+++..+..++.|++.||+|||+. +|+||||||+||++   +..+.+||+|||++..
T Consensus        82 ~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~  157 (288)
T cd06616          82 MELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILL---DRNGNIKLCDFGISGQ  157 (288)
T ss_pred             EecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEE---ccCCcEEEeecchhHH
Confidence            999864 554432   2  235799999999999999999999975 99999999999999   5677899999999976


Q ss_pred             cCCCCceecccCCccccchhhhhc----cCCCcchHHHHHHHHHHHhhCCCCCCCCCHH-HHHHHHHhCc-cCCCCCCCC
Q 043828          235 FKPGEQFCEIVGSPYYMAPEVLRR----NYGPEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGK-IDFERDPWP  308 (586)
Q Consensus       235 ~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~-~~~~~~~~~  308 (586)
                      ...........|++.|+|||++..    .++.++||||+||++|+|++|..||...... .....+..+. ...+...+.
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (288)
T cd06616         158 LVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEER  237 (288)
T ss_pred             hccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCC
Confidence            544433344578999999999864    4888999999999999999999999765421 1222222221 122222234


Q ss_pred             CCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          309 KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .++..+.+||.+||+++|.+|||+++++.||||+..
T Consensus       238 ~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~  273 (288)
T cd06616         238 EFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY  273 (288)
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence            588999999999999999999999999999999864

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=3.2e-40  Score=329.78  Aligned_cols=255  Identities=29%  Similarity=0.459  Sum_probs=205.6

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.+.||.|++|.||+|.+..+++.||+|.+.......  ....+.+|+.+++.+ +||||+++++++.+....|+
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~l   80 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG--APFTAIREASLLKDL-KHANIVTLHDIIHTKKTLTL   80 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC--CchhHHHHHHHHhhC-CCcceeeEEEEEecCCeEEE
Confidence            478999999999999999999998899999999987643221  123467899999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||+.+ +|.+++... ..+++..+..++.|++.||.|||+.+|+||||||+||++   +.++.+||+|||++......
T Consensus        81 v~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~  156 (291)
T cd07844          81 VFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLI---SERGELKLADFGLARAKSVP  156 (291)
T ss_pred             EEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEE---cCCCCEEECccccccccCCC
Confidence            9999975 898888653 468999999999999999999999999999999999999   56788999999998754321


Q ss_pred             -CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCC-HHHHHHHHHhCccC-------------
Q 043828          239 -EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAET-EEGIAHAIIRGKID-------------  301 (586)
Q Consensus       239 -~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~~i~~~~~~-------------  301 (586)
                       .......+++.|+|||++.+  .++.++||||+||++|+|++|..||.... .......+......             
T Consensus       157 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (291)
T cd07844         157 SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNP  236 (291)
T ss_pred             CccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcc
Confidence             12223456889999999853  47889999999999999999999997655 22222222111000             


Q ss_pred             ------CCC-------CCCCCCC--HHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          302 ------FER-------DPWPKVS--KEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       302 ------~~~-------~~~~~~~--~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                            +..       ..++.++  ..+.++|.+||+.+|.+|||+.+++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         237 EFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             ccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence                  000       0112344  788999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=9.2e-41  Score=328.90  Aligned_cols=255  Identities=30%  Similarity=0.458  Sum_probs=213.4

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||.|+||.||+|.+..+++.+|+|.+.....  ......+.+|+.+++++ +||||+++++.+.....+++|
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv   77 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKC-NSPYIVGFYGAFYNNGDISIC   77 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHC-CCCchhhhheeeecCCEEEEE
Confidence            368889999999999999999999999999999876532  23346788999999999 799999999999999999999


Q ss_pred             EeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          161 MELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHE-NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~-~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      +||+++++|.+++... ..+++..+..++.|++.||.|||+ .+++|+||||+||++   +..+.++|+|||.+......
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~---~~~~~~~l~d~g~~~~~~~~  154 (265)
T cd06605          78 MEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILV---NSRGQIKLCDFGVSGQLVNS  154 (265)
T ss_pred             EEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEE---CCCCCEEEeecccchhhHHH
Confidence            9999999999999875 789999999999999999999999 999999999999999   56788999999998765322


Q ss_pred             CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCC-----CHHHHHHHHHhCccCCCCCCCCCCCH
Q 043828          239 EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAE-----TEEGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      ... ...++..|+|||.+.+ .++.++|||||||++|+|++|..||...     ........+.....  +..+...++.
T Consensus       155 ~~~-~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  231 (265)
T cd06605         155 LAK-TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPP--PRLPSGKFSP  231 (265)
T ss_pred             Hhh-cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCC--CCCChhhcCH
Confidence            211 2678899999999864 6888999999999999999999999754     22233333333221  1111112788


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .+.++|.+||..||.+|||+.+++.||||++.
T Consensus       232 ~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         232 DFQDFVNLCLIKDPRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             HHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence            99999999999999999999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=3.2e-40  Score=330.31  Aligned_cols=259  Identities=29%  Similarity=0.443  Sum_probs=210.6

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||.|++|.||+|.+..+|+.||+|.+...... ......+.+|+.+++++ +||||+++++++.+...+|+|
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv   79 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED-EGVPSTAIREISLLKEM-QHGNIVRLQDVVHSEKRLYLV   79 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc-ccchHHHHHHHHHHHhc-cCCCEeeEEEEEecCCeEEEE
Confidence            6899999999999999999999999999999998654322 22335678899999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          161 MELCEGGELFDRIVNKGH--YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      |||++ ++|.+.+.....  +++..+..++.||+.||.|||+++|+||||+|+||+++.  .+..+||+|||++......
T Consensus        80 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~--~~~~~kl~dfg~~~~~~~~  156 (294)
T PLN00009         80 FEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR--RTNALKLADFGLARAFGIP  156 (294)
T ss_pred             Eeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC--CCCEEEEcccccccccCCC
Confidence            99996 578777765433  578889999999999999999999999999999999952  3467999999998764322


Q ss_pred             -CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCC-----------
Q 043828          239 -EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER-----------  304 (586)
Q Consensus       239 -~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~-----------  304 (586)
                       .......+++.|+|||++.+  .++.++||||+||++|+|++|.+||...+..+....+.........           
T Consensus       157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (294)
T PLN00009        157 VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPD  236 (294)
T ss_pred             ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchh
Confidence             22233467889999998854  4788999999999999999999999877665554443321100000           


Q ss_pred             --------------CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          305 --------------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       305 --------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                    ...+.++..+.++|.+||+.+|.+||++.+++.||||...
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~  290 (294)
T PLN00009        237 YKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL  290 (294)
T ss_pred             hhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence                          0124578899999999999999999999999999999864

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=2.2e-40  Score=329.75  Aligned_cols=256  Identities=25%  Similarity=0.358  Sum_probs=213.8

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|+||+||++.+..+|+.||+|++....  .......+.+|+.+++.+ +||||+++++++.....+|+|
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv   81 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHEC-RSPYIVSFYGAFLNENNICMC   81 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHc-CCCCcceEeeeEecCCEEEEE
Confidence            57999999999999999999999999999999886543  233356789999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||+++++|.+++...+.+++..+..++.+++.||.|||+ .+++||||+|+||++   +..+.++|+|||++...... 
T Consensus        82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~---~~~~~~~l~d~gl~~~~~~~-  157 (284)
T cd06620          82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILV---NSRGQIKLCDFGVSGELINS-  157 (284)
T ss_pred             EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEE---CCCCcEEEccCCcccchhhh-
Confidence            9999999999998887889999999999999999999997 699999999999999   56788999999998654322 


Q ss_pred             ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHH-----------HHHHHHHhCccCCCCCCC
Q 043828          240 QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEE-----------GIAHAIIRGKIDFERDPW  307 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----------~~~~~i~~~~~~~~~~~~  307 (586)
                      ......|+..|+|||++. ..++.++|||||||++|+|++|..||......           .....+.....  +..+.
T Consensus       158 ~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  235 (284)
T cd06620         158 IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP--PRLPS  235 (284)
T ss_pred             ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccC--CCCCc
Confidence            123457899999999885 56888999999999999999999999765432           22222222211  11112


Q ss_pred             CCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       308 ~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      ..++..+.+||.+||.+||.+|||+.|+++||||....
T Consensus       236 ~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~  273 (284)
T cd06620         236 SDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQAL  273 (284)
T ss_pred             hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence            23778999999999999999999999999999997543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=3.1e-40  Score=325.55  Aligned_cols=252  Identities=26%  Similarity=0.481  Sum_probs=210.6

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|+||.||+|++..+++.||+|.+.............+.+|+.+++.+ +||||+++++++.+.+.+++|
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v   80 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-NHPNVIKYLDSFIEDNELNIV   80 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC-CCcceeeeeeeEEECCeEEEE
Confidence            5899999999999999999999999999999998765444444456788999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          161 MELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +||+++++|.+++..    ...+++..+..++.|++.||.|||+++++|+||||+||++   +..+.++|+|||++....
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~---~~~~~~~l~d~g~~~~~~  157 (267)
T cd08228          81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEE---cCCCCEEECccccceecc
Confidence            999999999888753    3458999999999999999999999999999999999999   567789999999987754


Q ss_pred             CCCc-eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCH--HHHHHHHHhCccCCCCCCCCCCCH
Q 043828          237 PGEQ-FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETE--EGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       237 ~~~~-~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      .... .....|++.|+|||.+. ..++.++||||+|+++|+|++|..||.....  ......+....  ++..+...++.
T Consensus       158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  235 (267)
T cd08228         158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD--YPPLPTEHYSE  235 (267)
T ss_pred             chhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCC--CCCCChhhcCH
Confidence            3322 22356889999999986 4678899999999999999999999976532  33344433322  22223345788


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .+.++|.+||..+|++|||+.++++.
T Consensus       236 ~~~~li~~cl~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         236 KLRELVSMCIYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             HHHHHHHHHCCCCcccCcCHHHHHHH
Confidence            99999999999999999999999873

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=4.4e-40  Score=323.74  Aligned_cols=252  Identities=35%  Similarity=0.588  Sum_probs=216.4

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe--CCeEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED--KDAIYL  159 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~--~~~~~i  159 (586)
                      +|++.+.||.|+||.||+|.+..+|..+|+|.+...... ....+.+..|+.+++.+ +||||+++++++..  ...+|+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~   78 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMT-EKEKQQLVSEVNILREL-KHPNIVRYYDRIIDRSNQTLYI   78 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCC-HHHHHHHHHHHHHHHhc-CCCccceeeeeeecCCCCEEEE
Confidence            588999999999999999999999999999998765432 33456788999999999 89999999998753  457899


Q ss_pred             EEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHH-----HcCceeccCCCCceEeecCCCCCceEEeecc
Q 043828          160 VMELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCH-----ENGVMHRDLKPENFLFADGSENSQLKAIDFG  230 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH-----~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg  230 (586)
                      +|||+++++|.+++..    ...+++..++.++.||+.||.|||     +.+|+|+||+|+||++   +..+.+||+|||
T Consensus        79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili---~~~~~~kl~d~g  155 (265)
T cd08217          79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFL---DANNNVKLGDFG  155 (265)
T ss_pred             EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEE---ecCCCEEEeccc
Confidence            9999999999998865    357899999999999999999999     8999999999999999   567899999999


Q ss_pred             cccccCCCCc-eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCC
Q 043828          231 LSIFFKPGEQ-FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP  308 (586)
Q Consensus       231 ~a~~~~~~~~-~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  308 (586)
                      ++........ .....|++.|+|||++.. .++.++|+||||+++|+|++|..||...+.......+..+....   ...
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~  232 (265)
T cd08217         156 LAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRR---IPY  232 (265)
T ss_pred             ccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCC---Ccc
Confidence            9987654433 344578999999999864 57889999999999999999999998887777666666554322   123


Q ss_pred             CCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          309 KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      .++..+.+++.+||..+|.+|||+.++++|||+
T Consensus       233 ~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         233 RYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             ccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence            678999999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=2.8e-40  Score=333.27  Aligned_cols=259  Identities=29%  Similarity=0.440  Sum_probs=207.3

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC-
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD-  155 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~-  155 (586)
                      ....++|++.+.||+|+||.||+|.+..+++.||+|++....... .....+.+|+.+++++ +||||+++++++.... 
T Consensus         8 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~   85 (310)
T cd07865           8 CDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE-GFPITALREIKILQLL-KHENVVNLIEICRTKAT   85 (310)
T ss_pred             cchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC-CchhHHHHHHHHHHhC-CCCCccceEEEEecccc
Confidence            345678999999999999999999999999999999986543222 1223556899999999 8999999999987543 


Q ss_pred             -------eEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEe
Q 043828          156 -------AIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI  227 (586)
Q Consensus       156 -------~~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~  227 (586)
                             ..++||||+. ++|.+++... ..+++..+..++.||+.||.|||++|++|+||||+||++   +.++.+||+
T Consensus        86 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~  161 (310)
T cd07865          86 PYNRYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILI---TKDGILKLA  161 (310)
T ss_pred             cccCCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE---CCCCcEEEC
Confidence                   4599999996 4787777654 368999999999999999999999999999999999999   567899999


Q ss_pred             ecccccccCCCC-----ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc
Q 043828          228 DFGLSIFFKPGE-----QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI  300 (586)
Q Consensus       228 Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~  300 (586)
                      |||++.......     ......++..|+|||.+.+  .++.++||||||+++|+|++|.+||.+.+.......+.....
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~  241 (310)
T cd07865         162 DFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCG  241 (310)
T ss_pred             cCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence            999987653321     1123467889999998854  368899999999999999999999988776554444333211


Q ss_pred             CCCCCCC----------------------------CCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          301 DFERDPW----------------------------PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       301 ~~~~~~~----------------------------~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      .++...+                            ...+..+.+||.+||..||.+|||++++|+||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         242 SITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             CCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence            1111100                            0125678899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=1.7e-40  Score=342.83  Aligned_cols=252  Identities=21%  Similarity=0.341  Sum_probs=203.4

Q ss_pred             ccCeeecceeccCCceEEEEEEE-----ccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFE-----IETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~-----~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      .++|++++.||+|+||.||+|.+     ..++..||+|++.....  ....+.+.+|+.+++.+.+||||+++++++...
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~  111 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHINIVNLLGACTVG  111 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC--cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence            45899999999999999999964     34567899999865432  223467889999999997899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhCC---------------------------------------------------------
Q 043828          155 DAIYLVMELCEGGELFDRIVNKG---------------------------------------------------------  177 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~~---------------------------------------------------------  177 (586)
                      +..++|||||++|+|.+++....                                                         
T Consensus       112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (375)
T cd05104         112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS  191 (375)
T ss_pred             CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence            99999999999999999886422                                                         


Q ss_pred             ------------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          178 ------------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       178 ------------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                                        .+++..+..++.||+.||.|||++||+||||||+|||+   +....+||+|||++.......
T Consensus       192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill---~~~~~~kl~DfG~a~~~~~~~  268 (375)
T cd05104         192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIRNDS  268 (375)
T ss_pred             ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEE---ECCCcEEEecCccceeccCcc
Confidence                              36788889999999999999999999999999999999   456789999999997654332


Q ss_pred             ce---ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          240 QF---CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       240 ~~---~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      ..   ....++..|+|||++. ..++.++|||||||++|+|++ |..||.....................  ....+.++
T Consensus       269 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l  346 (375)
T cd05104         269 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLS--PECAPSEM  346 (375)
T ss_pred             cccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCC--CCCCCHHH
Confidence            11   1233456799999986 468999999999999999998 89999776544333333333222221  23467899


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .+||.+||+.||++|||+.++++.
T Consensus       347 ~~li~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         347 YDIMKSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             HHHHHHHccCChhHCcCHHHHHHH
Confidence            999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=1.5e-40  Score=330.93  Aligned_cols=254  Identities=26%  Similarity=0.450  Sum_probs=208.5

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|++.+.||.|++|.||+|++..+|+.||+|++...... ......+.+|+.+++++ +||||+++++++.+.+.+++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~   78 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVF   78 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccc-cccchHHHHHHHHHHhc-CCCCCcchhhhcccCCcEEEEe
Confidence            488999999999999999999999999999998654322 22335788899999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC-
Q 043828          162 ELCEGGELFDRIVN--KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-  238 (586)
Q Consensus       162 E~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-  238 (586)
                      ||+. ++|.+++..  ...+++..+..++.|++.||.|||+.+++||||+|+||++   +.++.+||+|||++...... 
T Consensus        79 e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill---~~~~~~~l~dfg~~~~~~~~~  154 (284)
T cd07860          79 EFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPV  154 (284)
T ss_pred             eccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEeeccchhhcccCc
Confidence            9996 588888765  3568999999999999999999999999999999999999   56789999999998765432 


Q ss_pred             CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccC---------------
Q 043828          239 EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID---------------  301 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~---------------  301 (586)
                      .......+++.|+|||++.+  .++.++|||||||++|+|++|..||...+.......+......               
T Consensus       155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (284)
T cd07860         155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDY  234 (284)
T ss_pred             cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHH
Confidence            22233457889999998753  3688899999999999999999999877665444333221110               


Q ss_pred             ---CCC-------CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          302 ---FER-------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       302 ---~~~-------~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                         ++.       ...+.++..++++|.+||+.||.+|||+.++++||||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         235 KPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             HhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence               000       0123467899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=3.7e-40  Score=324.82  Aligned_cols=248  Identities=16%  Similarity=0.243  Sum_probs=207.6

Q ss_pred             cCeeecceeccCCceEEEEEEEc---cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~---~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .+|++.+.||+|+||.||+|...   ..+..+|+|.+.....  ......+.+|+.+++++ +||||+++++++..++.+
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~   81 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS--DKQRRGFLAEALTLGQF-DHSNIVRLEGVITRGNTM   81 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC--HHHHHHHHHHHHHHhcC-CCCCcCeEEEEEecCCCc
Confidence            47999999999999999999764   3466899999865432  22345788999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      ++||||+++|+|.+++... ..+++..+..++.||+.||.|||++|++||||||+||++   +.++.++++|||.+....
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili---~~~~~~~l~dfg~~~~~~  158 (266)
T cd05064          82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLV---NSDLVCKISGFRRLQEDK  158 (266)
T ss_pred             EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEE---cCCCcEEECCCccccccc
Confidence            9999999999999998764 578999999999999999999999999999999999999   567899999999876543


Q ss_pred             CCCcee--cccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCH
Q 043828          237 PGEQFC--EIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       237 ~~~~~~--~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      ......  ...+++.|+|||++. ..++.++|||||||++|++++ |..||+..+..+....+..+.. .+  ....++.
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~-~~--~~~~~~~  235 (266)
T cd05064         159 SEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFR-LP--APRNCPN  235 (266)
T ss_pred             ccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC-CC--CCCCCCH
Confidence            221111  233567899999986 568999999999999999775 9999999888887777665532 22  2346789


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .+.+++.+||+.+|.+|||++++++
T Consensus       236 ~~~~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         236 LLHQLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             HHHHHHHHHcCCCchhCCCHHHHHH
Confidence            9999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.6e-40  Score=327.01  Aligned_cols=255  Identities=31%  Similarity=0.541  Sum_probs=214.2

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCC--CCCCeeEEEEEEEeCCeEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP--KHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~--~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .|++.+.||.|+||.||+|.+..+++.||+|.+.....  ......+.+|+.+++.+.  .||||+++++++.....+|+
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l   79 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP--DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI   79 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC--chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence            58889999999999999999999999999999865432  223467889999999994  49999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      ||||+++++|.+++.. ..+++..+..++.|++.||.|||+.||+|+||+|+||++   +..+.++|+|||++.......
T Consensus        80 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~~~  155 (277)
T cd06917          80 IMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILV---TNTGNVKLCDFGVAALLNQNS  155 (277)
T ss_pred             EEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEE---cCCCCEEEccCCceeecCCCc
Confidence            9999999999988765 478999999999999999999999999999999999999   557899999999988765433


Q ss_pred             -ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          240 -QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       240 -~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                       ......|+..|+|||.+..  .++.++|+|||||++|+|++|..||...........+...  ..+......++.++.+
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  233 (277)
T cd06917         156 SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS--KPPRLEDNGYSKLLRE  233 (277)
T ss_pred             cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC--CCCCCCcccCCHHHHH
Confidence             2234578999999999863  4688999999999999999999999877655444333222  1122222247889999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ++.+||+.||.+||++.+++.||||++.
T Consensus       234 ~i~~~l~~~p~~R~~~~~il~~~~~~~~  261 (277)
T cd06917         234 FVAACLDEEPKERLSAEELLKSKWIKAH  261 (277)
T ss_pred             HHHHHcCCCcccCcCHHHHhhChHhhcc
Confidence            9999999999999999999999999864

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.2e-43  Score=340.90  Aligned_cols=260  Identities=28%  Similarity=0.513  Sum_probs=238.7

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +.+++++..||-||||.|-++........+|+|++++..+-+....+.+..|-.||..+ +.|.||++|..|.+...+|+
T Consensus       419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~-~s~fIvrLYrTfrd~kyvYm  497 (732)
T KOG0614|consen  419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMEC-RSDFIVRLYRTFRDSKYVYM  497 (732)
T ss_pred             hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhc-CchHHHHHHHHhccchhhhh
Confidence            46788899999999999999976555556999999988877777778899999999999 79999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      +||-|-||.|...++.++.+.+..++.++..+++|+.|||++|||+|||||+|.++   +.+|.+||.|||+|+.+..+.
T Consensus       498 LmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL---d~~Gy~KLVDFGFAKki~~g~  574 (732)
T KOG0614|consen  498 LMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL---DNRGYLKLVDFGFAKKIGSGR  574 (732)
T ss_pred             hHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee---ccCCceEEeehhhHHHhccCC
Confidence            99999999999999999999999999999999999999999999999999999999   788999999999999999999


Q ss_pred             ceecccCCccccchhhh-hccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHH
Q 043828          240 QFCEIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV  318 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  318 (586)
                      ..+++||||.|.|||++ .+..+.++|.||||+++|||++|.+||.+.++..+...|.++.-....+  ..++..+.+||
T Consensus       575 KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~P--r~I~k~a~~Li  652 (732)
T KOG0614|consen  575 KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFP--RRITKTATDLI  652 (732)
T ss_pred             ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcc--cccchhHHHHH
Confidence            99999999999999986 4678999999999999999999999999999999999999986544433  47899999999


Q ss_pred             HHccCCCCCCCCC-----HHHHhcCCCccCCC
Q 043828          319 KNMLDPNPYNRLT-----LEEVLENPWIKNDN  345 (586)
Q Consensus       319 ~~~L~~dp~~Rps-----~~eil~hp~~~~~~  345 (586)
                      ++++..+|.+|..     +.+|-+|.||.+-.
T Consensus       653 k~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfd  684 (732)
T KOG0614|consen  653 KKLCRDNPTERLGYQKGGINDIKKHRWFEGFD  684 (732)
T ss_pred             HHHHhcCcHhhhccccCChHHHHhhhhhhcCC
Confidence            9999999999985     89999999998643

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=2e-40  Score=338.15  Aligned_cols=260  Identities=32%  Similarity=0.463  Sum_probs=212.2

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC----
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK----  154 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~----  154 (586)
                      +..+|.+.+.||+|+||+||+|.+..+|..||+|.+..... .......+.+|+.+++.+ +||||+++++++...    
T Consensus         3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~ni~~~~~~~~~~~~~~   80 (337)
T cd07858           3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-NRIDAKRTLREIKLLRHL-DHENVIAIKDIMPPPHREA   80 (337)
T ss_pred             cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-ccchhHHHHHHHHHHHhc-CCCCccchHHheecccccc
Confidence            45689999999999999999999999999999999875432 222345677899999999 899999999988644    


Q ss_pred             -CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          155 -DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       155 -~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                       ..+|+|+||+. ++|.+++...+.+++..+..++.|++.||.|||+++++||||||+||++   +..+.+||+|||++.
T Consensus        81 ~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~---~~~~~~kL~Dfg~~~  156 (337)
T cd07858          81 FNDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLL---NANCDLKICDFGLAR  156 (337)
T ss_pred             cCcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEECcCcccc
Confidence             35899999995 6899998888889999999999999999999999999999999999999   567889999999998


Q ss_pred             ccCCC-CceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCc-----------
Q 043828          234 FFKPG-EQFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK-----------  299 (586)
Q Consensus       234 ~~~~~-~~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~-----------  299 (586)
                      ..... .......++..|+|||.+.  ..++.++|||||||++|+|++|.+||.+.+.......+....           
T Consensus       157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (337)
T cd07858         157 TTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFI  236 (337)
T ss_pred             ccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhc
Confidence            66433 2223456889999999875  358899999999999999999999997765433332221100           


Q ss_pred             ------------cCCC----CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          300 ------------IDFE----RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       300 ------------~~~~----~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                  ...+    ...++.++..+.+||.+||+.+|.+|||+.++++||||...
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         237 RNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             CchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence                        0000    01134678999999999999999999999999999999754

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=2.2e-40  Score=340.10  Aligned_cols=258  Identities=27%  Similarity=0.440  Sum_probs=209.1

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC---
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK---  154 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~---  154 (586)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||+|++.+... .......+.+|+.+++.+ +||||++++++|...   
T Consensus        13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~   90 (353)
T cd07850          13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ-NVTHAKRAYRELVLMKLV-NHKNIIGLLNVFTPQKSL   90 (353)
T ss_pred             hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc-ChhHHHHHHHHHHHHHhc-CCCCCcceeeeeccCCCc
Confidence            356789999999999999999999999999999999865432 222345677899999999 899999999998643   


Q ss_pred             ---CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          155 ---DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       155 ---~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                         ..+|+||||+. ++|.+.+...  +++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||+
T Consensus        91 ~~~~~~~lv~e~~~-~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~---~~~~~~kL~Dfg~  164 (353)
T cd07850          91 EEFQDVYLVMELMD-ANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL  164 (353)
T ss_pred             cccCcEEEEEeccC-CCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEccCcc
Confidence               35799999996 4888877654  8999999999999999999999999999999999999   5678999999999


Q ss_pred             ccccCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc----------
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI----------  300 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~----------  300 (586)
                      +.............|++.|+|||.+. ..++.++|||||||++|+|++|..||...+.......+.....          
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (353)
T cd07850         165 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRL  244 (353)
T ss_pred             ceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHh
Confidence            98765443334456899999999986 4689999999999999999999999987665443333321100          


Q ss_pred             ------------CCC---------CC--------CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          301 ------------DFE---------RD--------PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       301 ------------~~~---------~~--------~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                                  ...         ..        .....+..+.+||.+||+.||++|||+.|+|.||||+.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~  316 (353)
T cd07850         245 QPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV  316 (353)
T ss_pred             hhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence                        000         00        01134567899999999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-40  Score=330.18  Aligned_cols=256  Identities=34%  Similarity=0.517  Sum_probs=211.8

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++...... ....+.+.+|+.+++.+ +||||+++++++..++.+++|
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv   78 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDD-EDVKKTALREVKVLRQL-RHENIVNLKEAFRRKGRLYLV   78 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhccc-ccchhHHHHHHHHHHhc-CCCCeeehhheEEECCEEEEE
Confidence            3799999999999999999999999999999998654322 23346788999999999 799999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-  239 (586)
                      |||++++.+..+......+++..+..++.|++.||.|||+.+++||||+|+||++   +.++.+||+|||++....... 
T Consensus        79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~---~~~~~~kl~d~g~~~~~~~~~~  155 (288)
T cd07833          79 FEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILV---SESGVLKLCDFGFARALRARPA  155 (288)
T ss_pred             EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEEeeecccccCCCcc
Confidence            9999987776666666679999999999999999999999999999999999999   567899999999988765433 


Q ss_pred             -ceecccCCccccchhhhh-c-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc----------------
Q 043828          240 -QFCEIVGSPYYMAPEVLR-R-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI----------------  300 (586)
Q Consensus       240 -~~~~~~gt~~y~aPE~l~-~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~----------------  300 (586)
                       ......++..|+|||++. . .++.++||||||+++|+|++|.+||...+..+....+.....                
T Consensus       156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (288)
T cd07833         156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRF  235 (288)
T ss_pred             ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccc
Confidence             233457889999999985 3 578899999999999999999999987665543333222100                


Q ss_pred             ---CCCCC---------CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          301 ---DFERD---------PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       301 ---~~~~~---------~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                         .++..         ....++..+++||++||..+|++|||++++++||||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         236 AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             cccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence               00000         011247889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=5e-40  Score=330.96  Aligned_cols=255  Identities=29%  Similarity=0.460  Sum_probs=213.8

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      ...|++.+.||+|+||.||+|.+..+|+.||+|++.............+.+|+.+++.+ +||||+++++++.+.+..|+
T Consensus        14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~l   92 (307)
T cd06607          14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL-RHPNTIEYKGCYLREHTAWL   92 (307)
T ss_pred             chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEEeCCeEEE
Confidence            35799999999999999999999889999999998655433334446788999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||+. |+|.+.+.. ...+++..+..++.|++.||.|||+.||+||||+|+||++   +.++.++|+|||++......
T Consensus        93 v~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~---~~~~~~kL~dfg~~~~~~~~  168 (307)
T cd06607          93 VMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILL---TEPGTVKLADFGSASLVSPA  168 (307)
T ss_pred             EHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEE---CCCCCEEEeecCcceecCCC
Confidence            999997 467666653 4568999999999999999999999999999999999999   56788999999998765433


Q ss_pred             CceecccCCccccchhhhh----ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          239 EQFCEIVGSPYYMAPEVLR----RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                         ....|++.|+|||++.    +.++.++||||||+++|+|++|.+||...+.......+.....  +......++..+
T Consensus       169 ---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  243 (307)
T cd06607         169 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS--PTLSSNDWSDYF  243 (307)
T ss_pred             ---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCC--CCCCchhhCHHH
Confidence               2356888999999873    4578899999999999999999999988776655544443321  111123467899


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +++|.+||..+|.+||++.+++.||||...
T Consensus       244 ~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  273 (307)
T cd06607         244 RNFVDSCLQKIPQDRPSSEELLKHRFVLRE  273 (307)
T ss_pred             HHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence            999999999999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=5.2e-40  Score=325.89  Aligned_cols=249  Identities=28%  Similarity=0.454  Sum_probs=202.6

Q ss_pred             eeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHH---HHHHhCCCCCCeeEEEEEEEeCCeEEEEEecc
Q 043828           88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV---EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELC  164 (586)
Q Consensus        88 ~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei---~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~  164 (586)
                      .||+|+||.||+|.+..+++.||+|.+.+..............|.   .+++.. .||+|+++++++...+.+|+||||+
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~e~~   79 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDKLSFILDLM   79 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCEEEEEEecC
Confidence            489999999999999999999999999875443222112233343   334444 7999999999999999999999999


Q ss_pred             CCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCceecc
Q 043828          165 EGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI  244 (586)
Q Consensus       165 ~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~  244 (586)
                      +|++|..++...+.+++..+..++.|++.||.|||+.+|+||||||+||++   +.++.++|+|||++....... ....
T Consensus        80 ~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili---~~~~~~kl~dfg~~~~~~~~~-~~~~  155 (278)
T cd05606          80 NGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKK-PHAS  155 (278)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEE---CCCCCEEEccCcCccccCccC-CcCc
Confidence            999999999888889999999999999999999999999999999999999   567789999999987553322 2345


Q ss_pred             cCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCC---CHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHH
Q 043828          245 VGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAE---TEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK  319 (586)
Q Consensus       245 ~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  319 (586)
                      .|+..|+|||++.+  .++.++||||+||++|+|++|..||...   ........+......    ....++..+.++|.
T Consensus       156 ~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~s~~~~~li~  231 (278)
T cd05606         156 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE----LPDSFSPELRSLLE  231 (278)
T ss_pred             CCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCC----CCCcCCHHHHHHHH
Confidence            78999999999863  5889999999999999999999999765   223322222222222    22346899999999


Q ss_pred             HccCCCCCCCC-----CHHHHhcCCCccCCC
Q 043828          320 NMLDPNPYNRL-----TLEEVLENPWIKNDN  345 (586)
Q Consensus       320 ~~L~~dp~~Rp-----s~~eil~hp~~~~~~  345 (586)
                      +||..+|.+||     ++.++++||||+...
T Consensus       232 ~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~  262 (278)
T cd05606         232 GLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD  262 (278)
T ss_pred             HHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence            99999999999     999999999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=1.3e-40  Score=332.50  Aligned_cols=259  Identities=31%  Similarity=0.502  Sum_probs=216.5

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ...+.|.....||.|+||.||++.+..++..||+|++....   ....+.+.+|+.+++.+ +||||+++++.+...+..
T Consensus        19 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~   94 (292)
T cd06658          19 DPREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDY-HHENVVDMYNSYLVGDEL   94 (292)
T ss_pred             chHHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---HHHHHHHHHHHHHHHhC-CCCcHHHHHHheecCCeE
Confidence            44456777788999999999999998999999999986532   23346788999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |+||||+++++|.+++.. +.+++..+..++.||+.||.|||+++|+||||||+||++   +.++.++|+|||++.....
T Consensus        95 ~lv~e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill---~~~~~~kL~dfg~~~~~~~  170 (292)
T cd06658          95 WVVMEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILL---TSDGRIKLSDFGFCAQVSK  170 (292)
T ss_pred             EEEEeCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE---cCCCCEEEccCcchhhccc
Confidence            999999999999887754 568999999999999999999999999999999999999   5668899999999875432


Q ss_pred             C-CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          238 G-EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       238 ~-~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      . .......|++.|+|||.+.+ .++.++||||+||++|+|++|..||...+.......+..... ........++..+.
T Consensus       171 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  249 (292)
T cd06658         171 EVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLP-PRVKDSHKVSSVLR  249 (292)
T ss_pred             ccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-CccccccccCHHHH
Confidence            2 12234568999999999864 688899999999999999999999988777665555443321 11122235788999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      ++|.+||..||.+|||++++++||||+...
T Consensus       250 ~li~~~l~~~P~~Rpt~~~il~~~~~~~~~  279 (292)
T cd06658         250 GFLDLMLVREPSQRATAQELLQHPFLKLAG  279 (292)
T ss_pred             HHHHHHccCChhHCcCHHHHhhChhhhccC
Confidence            999999999999999999999999998643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=4.2e-40  Score=323.87  Aligned_cols=255  Identities=27%  Similarity=0.434  Sum_probs=218.4

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||.|++|.||+|.+..+++.|++|++......  .....+.+|+.++.++ +||||+++++++.....+++|
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv   77 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSC-ESPYVVKCYGAFYKEGEISIV   77 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhc-CCCCeeeEEEEEccCCeEEEE
Confidence            3689999999999999999999999999999998765422  3356789999999999 799999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||+++++|.+++.....+++..+..++.|++.||.|||+ .+++||||+|+||++   +.++.++|+|||.+.......
T Consensus        78 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~---~~~~~~~l~df~~~~~~~~~~  154 (264)
T cd06623          78 LEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLI---NSKGEVKIADFGISKVLENTL  154 (264)
T ss_pred             EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEE---CCCCCEEEccCccceecccCC
Confidence            9999999999999888889999999999999999999999 999999999999999   567899999999988765433


Q ss_pred             ce-ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCC---CHHHHHHHHHhCccCCCCCCCCC-CCHH
Q 043828          240 QF-CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAE---TEEGIAHAIIRGKIDFERDPWPK-VSKE  313 (586)
Q Consensus       240 ~~-~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~---~~~~~~~~i~~~~~~~~~~~~~~-~~~~  313 (586)
                      .. ....++..|+|||.+. ..++.++||||||+++|+|++|..||...   ...+....+.......   .... ++..
T Consensus       155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  231 (264)
T cd06623         155 DQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPS---LPAEEFSPE  231 (264)
T ss_pred             CcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCC---CCcccCCHH
Confidence            22 2456889999999986 45788999999999999999999999776   4444444444332211   1123 7889


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +.++|.+||..+|++|||+.++++||||+..
T Consensus       232 l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~  262 (264)
T cd06623         232 FRDFISACLQKDPKKRPSAAELLQHPFIKKA  262 (264)
T ss_pred             HHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence            9999999999999999999999999999764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=6e-40  Score=329.93  Aligned_cols=251  Identities=24%  Similarity=0.310  Sum_probs=201.6

Q ss_pred             cCeeecceeccCCceEEEEEEEcc----------------CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCe
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIE----------------TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNI  144 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~----------------~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnI  144 (586)
                      ++|++.+.||+|+||.||+|.+..                ++..||+|++....  .......+.+|+.++.++ +||||
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~ni   81 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRL-KDPNI   81 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhc-CCCCe
Confidence            589999999999999999997532                34479999986543  222346788999999999 89999


Q ss_pred             eEEEEEEEeCCeEEEEEeccCCCChHHHHHhCC-------------------CCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 043828          145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG-------------------HYTERAAAAVGKTILRIVKVCHENGVMH  205 (586)
Q Consensus       145 v~l~~~~~~~~~~~iv~E~~~gg~L~~~l~~~~-------------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH  205 (586)
                      +++++++.+.+.+++||||+++|+|.+++....                   .+++..+..++.||+.||.|||++||+|
T Consensus        82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH  161 (304)
T cd05096          82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVH  161 (304)
T ss_pred             eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            999999999999999999999999999886531                   3577888999999999999999999999


Q ss_pred             ccCCCCceEeecCCCCCceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh--C
Q 043828          206 RDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC--G  279 (586)
Q Consensus       206 rDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~--g  279 (586)
                      |||||+|||+   +..+.+||+|||++........   .....++..|+|||++. +.++.++|||||||++|+|++  +
T Consensus       162 ~dlkp~Nill---~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~  238 (304)
T cd05096         162 RDLATRNCLV---GENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCK  238 (304)
T ss_pred             cCcchhheEE---cCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccC
Confidence            9999999999   5678999999999976543322   12334578899999875 568999999999999999986  6


Q ss_pred             CCCCCCCCHHHHHHHHHhC----ccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          280 VPPFWAETEEGIAHAIIRG----KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       280 ~~pf~~~~~~~~~~~i~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ..||...+.......+...    .........+.++..+.+||.+||..||.+|||+.+|..
T Consensus       239 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         239 EQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             CCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence            7888877766655443221    111111112457889999999999999999999999953

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=4.8e-42  Score=308.05  Aligned_cols=250  Identities=26%  Similarity=0.426  Sum_probs=208.9

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC-----
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK-----  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~-----  154 (586)
                      ..+|++.+.||+|||+.||+|.+..+++.||+|++....   ..+.+...+|++..+++ +||||++++++...+     
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf-~s~~vl~l~dh~l~~~~D~~   95 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKF-NSPNVLRLVDHQLREEKDGK   95 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhh-CCcchHHHHHHHHHhhccCc
Confidence            368999999999999999999999999999999997765   34567889999999999 999999998876432     


Q ss_pred             CeEEEEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCceEeecCCCCCceEEee
Q 043828          155 DAIYLVMELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHENG--VMHRDLKPENFLFADGSENSQLKAID  228 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivHrDlkp~Nill~~~~~~~~vkl~D  228 (586)
                      ...||+++|...|+|.+.+..    ...+++..+..|+.+++.||.+||+..  ++||||||.|||+   ...+.++|.|
T Consensus        96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILl---s~~~~~vl~D  172 (302)
T KOG2345|consen   96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILL---SDSGLPVLMD  172 (302)
T ss_pred             eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEe---cCCCceEEEe
Confidence            459999999999999998865    336999999999999999999999998  9999999999999   4578999999


Q ss_pred             cccccccCCC----------CceecccCCccccchhhhhc----cCCCcchHHHHHHHHHHHhhCCCCCCCCC--HHHHH
Q 043828          229 FGLSIFFKPG----------EQFCEIVGSPYYMAPEVLRR----NYGPEIDVWSAGVIIYILLCGVPPFWAET--EEGIA  292 (586)
Q Consensus       229 fg~a~~~~~~----------~~~~~~~gt~~y~aPE~l~~----~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~  292 (586)
                      ||.+....-.          ..+..-..|..|+|||.+.-    ..+.++|||||||+||.|+.|..||...-  ...+.
T Consensus       173 ~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSla  252 (302)
T KOG2345|consen  173 LGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLA  252 (302)
T ss_pred             ccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEE
Confidence            9998765311          11223456899999999852    36889999999999999999999994311  11233


Q ss_pred             HHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          293 HAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       293 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      -.+.++.+.+|...  .+|+.+.+||+.||+.||.+||++.+++.+
T Consensus       253 LAv~n~q~s~P~~~--~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  253 LAVQNAQISIPNSS--RYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             EeeeccccccCCCC--CccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            34566677777664  489999999999999999999999999874

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=4.9e-40  Score=358.48  Aligned_cols=253  Identities=26%  Similarity=0.380  Sum_probs=205.5

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +++|++.+.||+|+||.||+|++..+|+.||+|++...........+.+.+|+.+++++ +||||+++++++.+.+..|+
T Consensus         1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L-~HPNIVkl~~v~~d~~~lyL   79 (932)
T PRK13184          1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADL-IHPGIVPVYSICSDGDPVYY   79 (932)
T ss_pred             CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhC-CCcCcCeEEEEEeeCCEEEE
Confidence            36899999999999999999999999999999999765443344456788999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhC-----------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEee
Q 043828          160 VMELCEGGELFDRIVNK-----------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID  228 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~-----------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~D  228 (586)
                      ||||++||+|.+++...           ..++...+..++.||+.||.|||++||+||||||+||++   +..+.+||+|
T Consensus        80 VMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILL---d~dg~vKLiD  156 (932)
T PRK13184         80 TMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL---GLFGEVVILD  156 (932)
T ss_pred             EEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEE---cCCCCEEEEe
Confidence            99999999999988641           234566788899999999999999999999999999999   5678899999


Q ss_pred             cccccccCCC-------------------CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCH
Q 043828          229 FGLSIFFKPG-------------------EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETE  288 (586)
Q Consensus       229 fg~a~~~~~~-------------------~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~  288 (586)
                      ||++......                   ......+||+.|+|||++.+ .++.++|||||||++|+|++|..||.....
T Consensus       157 FGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~  236 (932)
T PRK13184        157 WGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKG  236 (932)
T ss_pred             cCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcch
Confidence            9999765210                   01112579999999999864 688999999999999999999999987554


Q ss_pred             HHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       289 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ......... .......++..+++.+.+++.+||..||++||+..+.+.
T Consensus       237 ~ki~~~~~i-~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl  284 (932)
T PRK13184        237 RKISYRDVI-LSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK  284 (932)
T ss_pred             hhhhhhhhc-cChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            433222111 111112234568899999999999999999987665553

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=3.4e-40  Score=336.44  Aligned_cols=260  Identities=30%  Similarity=0.494  Sum_probs=207.9

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC----
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK----  154 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~----  154 (586)
                      +.++|++.+.||+|+||.||+|++..+|+.||+|++....  .......+.+|+.+++++ +||||+++++++...    
T Consensus         3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~   79 (336)
T cd07849           3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRF-KHENIIGILDIIRPPSFES   79 (336)
T ss_pred             cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhC-CCCCcCchhheeecccccc
Confidence            4478999999999999999999999999999999986432  222345678899999999 899999999887644    


Q ss_pred             -CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          155 -DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       155 -~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                       ...|+|+||+. ++|.+.+. ...+++..++.++.|++.||.|||+.||+||||||+||++   +..+.+||+|||++.
T Consensus        80 ~~~~~lv~e~~~-~~l~~~~~-~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~  154 (336)
T cd07849          80 FNDVYIVQELME-TDLYKLIK-TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTNCDLKICDFGLAR  154 (336)
T ss_pred             cceEEEEehhcc-cCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---CCCCCEEECccccee
Confidence             35899999996 48877664 4579999999999999999999999999999999999999   567899999999987


Q ss_pred             ccCCCC----ceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCc--------
Q 043828          234 FFKPGE----QFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK--------  299 (586)
Q Consensus       234 ~~~~~~----~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~--------  299 (586)
                      ......    ......|++.|+|||.+.  ..++.++||||+||++|+|++|.+||.+.........+....        
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~  234 (336)
T cd07849         155 IADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDL  234 (336)
T ss_pred             eccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHH
Confidence            653321    122357899999999874  358889999999999999999999997765433322221100        


Q ss_pred             --------------cCC-CCC----CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCCC
Q 043828          300 --------------IDF-ERD----PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH  346 (586)
Q Consensus       300 --------------~~~-~~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~  346 (586)
                                    ... +..    ..+.++..+.+||.+||+.+|.+|||+.++++||||+....
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~  300 (336)
T cd07849         235 NCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHD  300 (336)
T ss_pred             HHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCC
Confidence                          000 000    12456788999999999999999999999999999987543

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=8.5e-40  Score=320.17  Aligned_cols=248  Identities=30%  Similarity=0.546  Sum_probs=213.5

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|++.+.||.|+||.||++.+..++..+|+|.+.....  ....+.+.+|+.+++.+ +||||+++++.+.+.+.+|+||
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~   77 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS--SSAVEDSRKEAVLLAKM-KHPNIVAFKESFEADGHLYIVM   77 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc--hHHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEE
Confidence            58999999999999999999999999999999865432  22356788899999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          162 ELCEGGELFDRIVN--KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       162 E~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      ||+++++|.+++..  ...+++..+..++.||+.||.|||++||+|+||||+||++   +..+.++|+|||.+.......
T Consensus        78 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~~~  154 (255)
T cd08219          78 EYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFL---TQNGKVKLGDFGSARLLTSPG  154 (255)
T ss_pred             eeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEE---CCCCcEEEcccCcceeecccc
Confidence            99999999988864  3458999999999999999999999999999999999999   567889999999987654322


Q ss_pred             -ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          240 -QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       240 -~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                       ......|++.|+|||++.+ .++.++|+||||+++|+|++|..||...+.......+..+.....   ...++..+.+|
T Consensus       155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l  231 (255)
T cd08219         155 AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPL---PSHYSYELRSL  231 (255)
T ss_pred             cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCC---CcccCHHHHHH
Confidence             2234578999999999864 588899999999999999999999998887777776665544322   23578899999


Q ss_pred             HHHccCCCCCCCCCHHHHhcC
Q 043828          318 VKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       318 i~~~L~~dp~~Rps~~eil~h  338 (586)
                      |.+||+.||.+|||+.+++.-
T Consensus       232 i~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         232 IKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHHHhCCcccCCCHHHHhhc
Confidence            999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=4.1e-40  Score=327.65  Aligned_cols=250  Identities=21%  Similarity=0.330  Sum_probs=211.3

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCC-----cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETG-----ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~-----~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      ..+|++.+.||+|+||.||+|.....+     ..+|+|.+....  .......+.+|+.+++.+ +||||+++++++...
T Consensus         4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~   80 (283)
T cd05048           4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDL-QHPNIVCLLGVCTKE   80 (283)
T ss_pred             hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhc-CCcccceEEEEEcCC
Confidence            357999999999999999999876554     679999886442  223345788999999999 899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecC
Q 043828          155 DAIYLVMELCEGGELFDRIVNK----------------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADG  218 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~  218 (586)
                      ...|++|||+++++|.+++...                ..+++..+..++.|++.||.|||++||+||||||+||++   
T Consensus        81 ~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~---  157 (283)
T cd05048          81 QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLV---  157 (283)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEE---
Confidence            9999999999999999998764                457888999999999999999999999999999999999   


Q ss_pred             CCCCceEEeecccccccCCCC---ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHH
Q 043828          219 SENSQLKAIDFGLSIFFKPGE---QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAH  293 (586)
Q Consensus       219 ~~~~~vkl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~  293 (586)
                      +.++.++|+|||++.......   ......+++.|+|||.+. ..++.++|||||||++|+|++ |..||.+.+..+...
T Consensus       158 ~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~  237 (283)
T cd05048         158 GEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIE  237 (283)
T ss_pred             cCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence            567789999999987653322   122345678899999875 568999999999999999998 999999988888877


Q ss_pred             HHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          294 AIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       294 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .+........   ...++..+.+|+.+||+.||.+||++.+++++
T Consensus       238 ~i~~~~~~~~---~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         238 MIRSRQLLPC---PEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             HHHcCCcCCC---cccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            7766543321   24688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=6.7e-40  Score=326.28  Aligned_cols=253  Identities=29%  Similarity=0.492  Sum_probs=209.0

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|++.+.||.|++|.||+|++..+|..||+|++......  .....+.+|+.+++.+ +||||+++++++.+.+.+++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~   77 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE--GTPSTAIREISLMKEL-KHENIVRLHDVIHTENKLMLVF   77 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc--cchHHHHHHHHHHHhh-cCCCEeeeeeeEeeCCcEEEEE
Confidence            589999999999999999999999999999998765422  2235677899999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          162 ELCEGGELFDRIVNK---GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       162 E~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||+++ +|.+++...   ..+++..+..++.|++.||.|||+.||+||||||+||++   +.++.++|+|||++......
T Consensus        78 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~---~~~~~~~l~d~g~~~~~~~~  153 (284)
T cd07836          78 EYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLI---NKRGELKLADFGLARAFGIP  153 (284)
T ss_pred             ecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE---CCCCcEEEeecchhhhhcCC
Confidence            99975 888887654   358999999999999999999999999999999999999   56788999999998754322


Q ss_pred             -CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCC-------------
Q 043828          239 -EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF-------------  302 (586)
Q Consensus       239 -~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-------------  302 (586)
                       .......+++.|+|||++.+  .++.++|||||||++|+|++|..||.+.+..+....+.......             
T Consensus       154 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (284)
T cd07836         154 VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPE  233 (284)
T ss_pred             ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCch
Confidence             12233467889999999854  46889999999999999999999998777665544443211000             


Q ss_pred             -----CC-------CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          303 -----ER-------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       303 -----~~-------~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                           +.       ...+.++..++++|.+||+.||.+||++.++++||||
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence                 00       0013467889999999999999999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=1.4e-39  Score=323.93  Aligned_cols=255  Identities=31%  Similarity=0.522  Sum_probs=215.7

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      .|...+.||.|++|.||++.+..+++.+++|++....   ....+.+.+|+.+++.+ +||||+++++++...+..++|+
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~~-~h~~vv~~~~~~~~~~~~~~v~   95 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK---QQRRELLFNEVVIMRDY-QHPNIVEMYSSYLVGDELWVVM   95 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc---hhHHHHHHHHHHHHHHc-CCCChheEEEEEEcCCeEEEEE
Confidence            4555679999999999999998899999999885432   22345688999999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-c
Q 043828          162 ELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-Q  240 (586)
Q Consensus       162 E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-~  240 (586)
                      ||++|++|.+++.. .++++..+..++.|++.||.|||++||+||||+|+||++   +.++.++|+|||.+....... .
T Consensus        96 e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~d~g~~~~~~~~~~~  171 (285)
T cd06648          96 EFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILL---TSDGRVKLSDFGFCAQVSKEVPR  171 (285)
T ss_pred             eccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEE---cCCCcEEEcccccchhhccCCcc
Confidence            99999999998877 678999999999999999999999999999999999999   567899999999876543321 2


Q ss_pred             eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHH
Q 043828          241 FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK  319 (586)
Q Consensus       241 ~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  319 (586)
                      .....|++.|+|||.+.+ .++.++||||+||++|+|++|..||...+.......+......... ....++..+.+||.
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~  250 (285)
T cd06648         172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLK-NLHKVSPRLRSFLD  250 (285)
T ss_pred             cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCc-ccccCCHHHHHHHH
Confidence            233568999999999864 5888999999999999999999999887776666666555322211 12347889999999


Q ss_pred             HccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          320 NMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       320 ~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      +||..+|++|||+.++++||||++..
T Consensus       251 ~~l~~~p~~Rpt~~~il~~~~~~~~~  276 (285)
T cd06648         251 RMLVRDPAQRATAAELLNHPFLAKAG  276 (285)
T ss_pred             HHcccChhhCcCHHHHccCcccccCC
Confidence            99999999999999999999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=4.2e-40  Score=323.90  Aligned_cols=250  Identities=36%  Similarity=0.606  Sum_probs=217.0

Q ss_pred             eccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCCCC
Q 043828           89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGE  168 (586)
Q Consensus        89 lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~gg~  168 (586)
                      ||.|+||.||+|++..+|+.+++|++.............+.+|+.+++++ +||||+++++.+.....+|+||||+++++
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQA-QSPYVVKLYYSFQGKKNLYLVMEYLPGGD   79 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhC-CCcchhHHHHheecCcEEEEEEecCCCCc
Confidence            68999999999999889999999999766543344557889999999999 79999999999999999999999999999


Q ss_pred             hHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC---------
Q 043828          169 LFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE---------  239 (586)
Q Consensus       169 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~---------  239 (586)
                      |.+++...+.+++..+..++.|++.||.|||+.+++||||+|+||++   +.++.++|+|||++.......         
T Consensus        80 L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  156 (265)
T cd05579          80 LASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILI---DSNGHLKLTDFGLSKVGLVRRQINLNDDEK  156 (265)
T ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEE---cCCCCEEEEecccchhcccCcccccccccc
Confidence            99999887789999999999999999999999999999999999999   567899999999987643321         


Q ss_pred             ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHH
Q 043828          240 QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV  318 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  318 (586)
                      ......+++.|+|||.+.. .++.++||||||+++|+|++|..||...........+..+...++..  ..++..+.++|
T Consensus       157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i  234 (265)
T cd05579         157 EDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPED--VEVSDEAIDLI  234 (265)
T ss_pred             cccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCcc--ccCCHHHHHHH
Confidence            2234568889999999863 57889999999999999999999999888888877777655544332  23589999999


Q ss_pred             HHccCCCCCCCCCH---HHHhcCCCccCC
Q 043828          319 KNMLDPNPYNRLTL---EEVLENPWIKND  344 (586)
Q Consensus       319 ~~~L~~dp~~Rps~---~eil~hp~~~~~  344 (586)
                      .+||+.+|.+|||+   .++|+||||+..
T Consensus       235 ~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~  263 (265)
T cd05579         235 SKLLVPDPEKRLGAKSIEEIKNHPFFKGI  263 (265)
T ss_pred             HHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence            99999999999999   999999999853

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=4.4e-40  Score=328.93  Aligned_cols=260  Identities=30%  Similarity=0.537  Sum_probs=216.1

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      +...++|.+.+.||+|+||.||++.+..++..+|+|.+....   ....+.+.+|+.+++.+ +||||+++++++...+.
T Consensus        15 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~   90 (293)
T cd06647          15 GDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ---QPKKELIINEILVMREN-KHPNIVNYLDSYLVGDE   90 (293)
T ss_pred             cCchhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc---chHHHHHHHHHHHHhhc-CCCCeeehhheeeeCCc
Confidence            344579999999999999999999988899999999985432   22346788999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|+|+||+++++|.+++... .+++..+..++.|++.||.|||++|++||||+|+||++   +..+.++|+|||++....
T Consensus        91 ~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili---~~~~~~kL~dfg~~~~~~  166 (293)
T cd06647          91 LWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQIT  166 (293)
T ss_pred             EEEEEecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEE---cCCCCEEEccCcceeccc
Confidence            99999999999999988653 58899999999999999999999999999999999999   567789999999887654


Q ss_pred             CCC-ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          237 PGE-QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       237 ~~~-~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      ... ......|++.|+|||.+. +.++.++|||||||++|+|++|..||...+.......+..... .....+..++..+
T Consensus       167 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l  245 (293)
T cd06647         167 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT-PELQNPEKLSAIF  245 (293)
T ss_pred             ccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCC-CCCCCccccCHHH
Confidence            332 223356889999999885 4688899999999999999999999987665443333222211 1112234578899


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      .++|.+||..+|.+||++.+++.||||+...
T Consensus       246 ~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~  276 (293)
T cd06647         246 RDFLNRCLEMDVEKRGSAKELLQHPFLKIAK  276 (293)
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence            9999999999999999999999999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=4.4e-40  Score=329.51  Aligned_cols=256  Identities=27%  Similarity=0.496  Sum_probs=215.9

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      ...|.....||+|+||.||+|.+..+++.||+|++.....   ...+.+.+|+.+++.+ +||||+++++++..++.+|+
T Consensus        20 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~i   95 (297)
T cd06659          20 RSLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDY-QHQNVVEMYKSYLVGEELWV   95 (297)
T ss_pred             hhhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhC-CCCchhhhhhheeeCCeEEE
Confidence            3456667789999999999999988999999999865432   2346688999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      ||||+++++|..++.. ..+++..+..++.|++.||.|||+.||+||||||+||++   +.++.+||+|||++.......
T Consensus        96 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill---~~~~~~kL~dfg~~~~~~~~~  171 (297)
T cd06659          96 LMEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDV  171 (297)
T ss_pred             EEecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEE---ccCCcEEEeechhHhhccccc
Confidence            9999999999887654 568999999999999999999999999999999999999   567899999999987554322


Q ss_pred             -ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          240 -QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       240 -~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                       ......|++.|+|||++.+ .++.++|||||||++|+|++|..||...........+...... ....+..++..+.++
T Consensus       172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~  250 (297)
T cd06659         172 PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPP-KLKNAHKISPVLRDF  250 (297)
T ss_pred             ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCC-CccccCCCCHHHHHH
Confidence             2234578999999999864 6889999999999999999999999887766655554433222 222335678899999


Q ss_pred             HHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          318 VKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       318 i~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      |.+||+.+|.+||++.++++||||.+.
T Consensus       251 i~~~l~~~P~~Rps~~~ll~~~~~~~~  277 (297)
T cd06659         251 LERMLTREPQERATAQELLDHPFLLQT  277 (297)
T ss_pred             HHHHhcCCcccCcCHHHHhhChhhccC
Confidence            999999999999999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=5.6e-40  Score=329.84  Aligned_cols=250  Identities=24%  Similarity=0.359  Sum_probs=204.2

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEE--EEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETY--ACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~--avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ++|++.+.||+|+||.||+|.+..++..+  |+|.+...  ........+.+|+.++.++.+||||+++++++...+.+|
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~   84 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY   84 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence            58999999999999999999988777654  66655432  223334678889999999978999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCC
Q 043828          159 LVMELCEGGELFDRIVNKG----------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENS  222 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~  222 (586)
                      +||||+++++|.+++....                .+++..+..++.||+.||.|||++||+||||||+|||+   +..+
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili---~~~~  161 (303)
T cd05088          85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENY  161 (303)
T ss_pred             EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEe---cCCC
Confidence            9999999999999987542                47899999999999999999999999999999999999   5678


Q ss_pred             ceEEeecccccccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCcc
Q 043828          223 QLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKI  300 (586)
Q Consensus       223 ~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~  300 (586)
                      .+||+|||++.............++..|+|||.+.. .++.++|||||||++|+|++ |..||...+..+....+.... 
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-  240 (303)
T cd05088         162 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-  240 (303)
T ss_pred             cEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC-
Confidence            899999999864322111112234667999998864 57889999999999999998 999998877766665554331 


Q ss_pred             CCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       301 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .  ......++..+.+||.+||+.+|++||++++++.+
T Consensus       241 ~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         241 R--LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             c--CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            1  11223478899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=6.9e-40  Score=324.94  Aligned_cols=253  Identities=28%  Similarity=0.462  Sum_probs=214.1

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      -|++.+.||.|+||.||+|.+..++..+|+|.+.....  ......+.+|+.+++++ +||||+++++++..+..+|+||
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~   81 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWIIM   81 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHHHhc-CCCCEeEEEEEEEeCCeEEEEE
Confidence            47888999999999999999988999999998865432  22346788999999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-c
Q 043828          162 ELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-Q  240 (586)
Q Consensus       162 E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-~  240 (586)
                      ||+++++|.+++.. ..+++..+..++.|++.++.|||+.|++|+||+|+||++   +..+.++|+|||++....... .
T Consensus        82 e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i---~~~~~~~l~dfg~~~~~~~~~~~  157 (277)
T cd06641          82 EYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIK  157 (277)
T ss_pred             EeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEE---CCCCCEEEeecccceecccchhh
Confidence            99999999988764 468999999999999999999999999999999999999   567889999999987654322 1


Q ss_pred             eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHH
Q 043828          241 FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK  319 (586)
Q Consensus       241 ~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  319 (586)
                      .....|+..|+|||.+.. .++.++|+||+||++|+|++|..||...........+......   .....++..+.++|.
T Consensus       158 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~  234 (277)
T cd06641         158 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPP---TLEGNYSKPLKEFVE  234 (277)
T ss_pred             hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCC---CCCcccCHHHHHHHH
Confidence            223468889999999864 5788999999999999999999999877766555554433221   112357889999999


Q ss_pred             HccCCCCCCCCCHHHHhcCCCccCC
Q 043828          320 NMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       320 ~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +||..+|.+||++.+++.||||.+.
T Consensus       235 ~~l~~~p~~Rp~~~~~l~~~~~~~~  259 (277)
T cd06641         235 ACLNKEPSFRPTAKELLKHKFIVRF  259 (277)
T ss_pred             HHccCChhhCcCHHHHHhCHHHhhh
Confidence            9999999999999999999999864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=3.2e-40  Score=327.72  Aligned_cols=254  Identities=33%  Similarity=0.626  Sum_probs=220.8

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|.+.+.||+|+||.||+|.+..+|..||+|++.+...........+.+|+.+++++.+||||+++++++...+.+++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            37999999999999999999999999999999997755444444567889999999994499999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-  239 (586)
                      |||+++++|.+++...+.+++..+..++.|++.||.|||++|++|+||+|+||++   ..++.++|+|||++....... 
T Consensus        81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i---~~~~~~~l~df~~~~~~~~~~~  157 (280)
T cd05581          81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILL---DKDMHIKITDFGTAKVLDPNSS  157 (280)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE---CCCCCEEecCCccccccCCccc
Confidence            9999999999999888889999999999999999999999999999999999999   567899999999987654321 


Q ss_pred             --------------------ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhC
Q 043828          240 --------------------QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRG  298 (586)
Q Consensus       240 --------------------~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~  298 (586)
                                          ......|+..|+|||++. ..++.++||||||+++|++++|..||...+.......+...
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  237 (280)
T cd05581         158 PESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKL  237 (280)
T ss_pred             cccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc
Confidence                                112346788999999886 45788999999999999999999999888776666666654


Q ss_pred             ccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCH----HHHhcCCCc
Q 043828          299 KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTL----EEVLENPWI  341 (586)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~----~eil~hp~~  341 (586)
                      ...++    ..+++.+.+||.+||+.+|.+|||+    +++++||||
T Consensus       238 ~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         238 EYSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             CCCCC----CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence            44433    3568999999999999999999999    999999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=2e-39  Score=323.29  Aligned_cols=257  Identities=31%  Similarity=0.477  Sum_probs=208.9

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe--CCeEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED--KDAIY  158 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~--~~~~~  158 (586)
                      ++|...+.||.|++|.||+|.+..+++.+|+|.+.....  ......+.+|+++++++ +||||+++++++..  .+.+|
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~   77 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN--PDLQKQILRELEINKSC-KSPYIVKYYGAFLDESSSSIG   77 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc--hHHHHHHHHHHHHHHhC-CCCCeeeeeeEEEccCCCeEE
Confidence            368999999999999999999999999999999875432  22346789999999999 89999999998865  34789


Q ss_pred             EEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          159 LVMELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      +||||+++++|.+++..    ...+++..+..++.||+.||.|||+.|++|+||+|+||++   +..+.++|+|||++..
T Consensus        78 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~---~~~~~~~l~dfg~~~~  154 (287)
T cd06621          78 IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILL---TRKGQVKLCDFGVSGE  154 (287)
T ss_pred             EEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---ecCCeEEEeecccccc
Confidence            99999999999887643    3458999999999999999999999999999999999999   4567899999999875


Q ss_pred             cCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCC-----CHHHHHHHHHhCcc-CCCCCCC
Q 043828          235 FKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAE-----TEEGIAHAIIRGKI-DFERDPW  307 (586)
Q Consensus       235 ~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~-----~~~~~~~~i~~~~~-~~~~~~~  307 (586)
                      ..... .....++..|+|||.+. ..++.++|||||||++|+|++|..||...     ...+....+..... ..+....
T Consensus       155 ~~~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (287)
T cd06621         155 LVNSL-AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPG  233 (287)
T ss_pred             ccccc-cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCC
Confidence            43222 12346788999999886 46889999999999999999999999765     23344444333221 1111111


Q ss_pred             --CCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          308 --PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       308 --~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                        ..+++.+.+||.+||..+|.+|||+.|++.||||++.
T Consensus       234 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~  272 (287)
T cd06621         234 NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQ  272 (287)
T ss_pred             CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccc
Confidence              2356789999999999999999999999999999764

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=1.1e-39  Score=325.92  Aligned_cols=255  Identities=25%  Similarity=0.390  Sum_probs=203.4

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      ..+|++.+.||+|+||.||+|.+..+|+.||+|++.......  ....+.+|+.+++.+ +||||+++++++..+...|+
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~l   80 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG--VPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTF   80 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC--CcHHHHHHHHHHHhc-CCCCEeEEEEEEecCCeEEE
Confidence            368999999999999999999999999999999986553222  223567899999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||+. ++|.+++.. ...+++..+..++.|++.||.|||+.||+|+||||+||++   +..+.++|+|||++......
T Consensus        81 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~~~  156 (291)
T cd07870          81 VFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLI---SYLGELKLADFGLARAKSIP  156 (291)
T ss_pred             EEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE---cCCCcEEEeccccccccCCC
Confidence            999996 677776654 3567888999999999999999999999999999999999   56789999999998754322


Q ss_pred             -CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHH-HHHHHHHhCc--------------c
Q 043828          239 -EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGK--------------I  300 (586)
Q Consensus       239 -~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~--------------~  300 (586)
                       .......+++.|+|||++.+  .++.++|||||||++|+|++|..||...... +....+....              .
T Consensus       157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (291)
T cd07870         157 SQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLP  236 (291)
T ss_pred             CCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcc
Confidence             22234467899999999853  4788999999999999999999999765432 2222211100              0


Q ss_pred             CCCC------------CCCC--CCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          301 DFER------------DPWP--KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       301 ~~~~------------~~~~--~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      .+..            ..|.  ..+..+.+++.+||..||.+|||+++++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         237 NYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             cccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence            0000            0011  125688999999999999999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=4.7e-40  Score=327.20  Aligned_cols=253  Identities=28%  Similarity=0.459  Sum_probs=209.0

Q ss_pred             eeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEe
Q 043828           83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVME  162 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E  162 (586)
                      |++.+.||.|++|.||+|.+..+|..||+|++....... .....+.+|+.+++.+ +||||+++++++.+.+..|+|||
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~l-~~~~iv~~~~~~~~~~~~~iv~e   78 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDE-GVPSTAIREISLLKEL-NHPNIVRLLDVVHSENKLYLVFE   78 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccc-cchhHHHHHHHHHHhc-CCCCccCHhheeccCCeEEEEEe
Confidence            678899999999999999999999999999987654322 2235678899999999 89999999999999999999999


Q ss_pred             ccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC-C
Q 043828          163 LCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-E  239 (586)
Q Consensus       163 ~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~  239 (586)
                      |++ ++|.+++....  .+++..+..++.|++.||.|||+++++||||+|+||++   +.++.++|+|||++...... .
T Consensus        79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~---~~~~~~~l~df~~~~~~~~~~~  154 (283)
T cd07835          79 FLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLI---DREGALKLADFGLARAFGVPVR  154 (283)
T ss_pred             ccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE---cCCCcEEEeecccccccCCCcc
Confidence            995 68999887765  68999999999999999999999999999999999999   45789999999998765322 1


Q ss_pred             ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccC----------------
Q 043828          240 QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID----------------  301 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~----------------  301 (586)
                      ......+++.|+|||++.+  .++.++|||||||++|+|++|.+||...+.......+.+....                
T Consensus       155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (283)
T cd07835         155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYK  234 (283)
T ss_pred             ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhh
Confidence            2233456889999998753  4688999999999999999999999877665443333221100                


Q ss_pred             --C-------CCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          302 --F-------ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       302 --~-------~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                        +       .....+.++..+.++|.+||+.+|.+|||+++++.||||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         235 PTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             hhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence              0       011134577899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=7.8e-40  Score=326.83  Aligned_cols=256  Identities=27%  Similarity=0.532  Sum_probs=213.0

Q ss_pred             CeeecceeccCCceEEEEEEEc---cCCcEEEEEEeeccccC-ChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           82 KYTFGKELGRGEFGITHQCFEI---ETGETYACKKIAKEKLK-TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~---~~~~~~avK~i~~~~~~-~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      +|++.+.||.|+||.||.|.+.   .+|..||+|++...... .....+.+.+|+.+++++.+||||++++++++.+..+
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            4889999999999999999874   47899999998764322 1223456788999999997799999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |+||||+++++|.+++.....+++..+..++.|++.||.|||+.|++||||+|+||++   +.++.+||+|||++.....
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~  157 (290)
T cd05613          81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFHE  157 (290)
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE---CCCCCEEEeeCccceeccc
Confidence            9999999999999999888889999999999999999999999999999999999999   5678999999999876543


Q ss_pred             CC--ceecccCCccccchhhhhc---cCCCcchHHHHHHHHHHHhhCCCCCCCCC----HHHHHHHHHhCccCCCCCCCC
Q 043828          238 GE--QFCEIVGSPYYMAPEVLRR---NYGPEIDVWSAGVIIYILLCGVPPFWAET----EEGIAHAIIRGKIDFERDPWP  308 (586)
Q Consensus       238 ~~--~~~~~~gt~~y~aPE~l~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~  308 (586)
                      ..  ......|+..|+|||.+..   .++.++||||||+++|+|++|..||....    ...+...+......+    ..
T Consensus       158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~  233 (290)
T cd05613         158 DEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY----PQ  233 (290)
T ss_pred             ccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCC----Cc
Confidence            22  2234568999999999853   46789999999999999999999996432    233333333332222    23


Q ss_pred             CCCHHHHHHHHHccCCCCCCCC-----CHHHHhcCCCccCC
Q 043828          309 KVSKEAKELVKNMLDPNPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      .+++.+.+++.+||..||.+||     ++++++.||||+..
T Consensus       234 ~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~  274 (290)
T cd05613         234 EMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKI  274 (290)
T ss_pred             cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccC
Confidence            5788999999999999999997     89999999999865

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=1.1e-39  Score=319.68  Aligned_cols=253  Identities=26%  Similarity=0.527  Sum_probs=214.7

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|.+.+.||.|+||.||+|.+..+|..+|+|.+....... ...+.+.+|+.+++.+ +||||+++++.+...+.+|+|+
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~   78 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV-KEKEASKKEVILLAKM-KHPNIVTFFASFQENGRLFIVM   78 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc-hhhHHHHHHHHHHHhC-CCCChhhhhheeccCCeEEEEE
Confidence            5889999999999999999999999999999987654322 2346788999999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          162 ELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       162 E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      ||+++++|.+++....  .+++..+..++.|++.||.|||+.+++|+||||+||++++  ....+||+|||.+.......
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~--~~~~~~l~d~~~~~~~~~~~  156 (257)
T cd08225          79 EYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSK--NGMVAKLGDFGIARQLNDSM  156 (257)
T ss_pred             ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcC--CCCeEEecccccchhccCCc
Confidence            9999999999887643  4789999999999999999999999999999999999942  23457999999987664332


Q ss_pred             c-eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          240 Q-FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       240 ~-~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                      . .....|++.|+|||++. ..++.++|+|||||++|+|++|..||...+.......+.......   ..+.++..+.++
T Consensus       157 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  233 (257)
T cd08225         157 ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAP---ISPNFSRDLRSL  233 (257)
T ss_pred             ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCC---CCCCCCHHHHHH
Confidence            2 22346899999999886 458889999999999999999999998877666666555443321   224578899999


Q ss_pred             HHHccCCCCCCCCCHHHHhcCCCc
Q 043828          318 VKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       318 i~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      |.+||..+|++|||+.+++.||||
T Consensus       234 i~~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         234 ISQLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             HHHHhccChhhCcCHHHHhhCCCC
Confidence            999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=8e-40  Score=322.62  Aligned_cols=251  Identities=27%  Similarity=0.508  Sum_probs=209.5

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||.|++|.||+|.+..+++.+|+|.+.............+.+|+.+++.+ +||||+++++++..++.++++
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~v   80 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIV   80 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHc-cCCchhhhhheeEeCCeEEEE
Confidence            5799999999999999999999999999999988765444444456788999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          161 MELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      |||+++++|.+++..    ...+++..++.++.||+.||.|||++|++|+||||+||++   +.++.++|+|||++....
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~  157 (267)
T cd08229          81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEECcchhhhccc
Confidence            999999999988863    3468999999999999999999999999999999999999   567789999999987654


Q ss_pred             CCCc-eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHH--HHHHHHHhCccCCCCCCCCCCCH
Q 043828          237 PGEQ-FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEE--GIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       237 ~~~~-~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      .... .....|++.|+|||.+. ..++.++||||||+++|+|++|..||......  .....+...  .++..++..++.
T Consensus       158 ~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  235 (267)
T cd08229         158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC--DYPPLPSDHYSE  235 (267)
T ss_pred             cCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC--CCCCCCcccccH
Confidence            3322 23456899999999986 45788999999999999999999999765432  233333322  223333345788


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .+.++|.+||..||.+|||+.+|++
T Consensus       236 ~~~~li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         236 ELRQLVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             HHHHHHHHhcCCCcccCCCHHHHHH
Confidence            9999999999999999999998765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=1.5e-39  Score=320.99  Aligned_cols=249  Identities=29%  Similarity=0.452  Sum_probs=202.1

Q ss_pred             cceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccC
Q 043828           86 GKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCE  165 (586)
Q Consensus        86 ~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~  165 (586)
                      ...||+|+||.||+|.+..++..+|+|.+....   ....+.+.+|+.+++.+ +||||+++++++..++.+++|+||++
T Consensus        13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~   88 (268)
T cd06624          13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYL-KHRNIVQYLGSDSENGFFKIFMEQVP   88 (268)
T ss_pred             eEEEecCCceEEEEeEecCCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhc-CCCCeeeeeeeeccCCEEEEEEecCC
Confidence            357999999999999998899999999886543   22346788999999999 89999999999999999999999999


Q ss_pred             CCChHHHHHhC-CCC--CHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-ce
Q 043828          166 GGELFDRIVNK-GHY--TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-QF  241 (586)
Q Consensus       166 gg~L~~~l~~~-~~~--~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-~~  241 (586)
                      +++|.+++... ..+  ++..+..++.||+.||.|||++||+||||||+||+++  ...+.++|+|||++....... ..
T Consensus        89 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~--~~~~~~~l~dfg~~~~~~~~~~~~  166 (268)
T cd06624          89 GGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVN--TYSGVVKISDFGTSKRLAGINPCT  166 (268)
T ss_pred             CCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc--CCCCeEEEecchhheecccCCCcc
Confidence            99999998764 445  8888999999999999999999999999999999994  235689999999987653322 22


Q ss_pred             ecccCCccccchhhhhc---cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHH
Q 043828          242 CEIVGSPYYMAPEVLRR---NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV  318 (586)
Q Consensus       242 ~~~~gt~~y~aPE~l~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  318 (586)
                      ....|++.|+|||++..   .++.++||||+|+++|+|++|..||............ .............++..+.+|+
T Consensus       167 ~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li  245 (268)
T cd06624         167 ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFK-VGMFKIHPEIPESLSAEAKNFI  245 (268)
T ss_pred             ccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhh-hhhhccCCCCCcccCHHHHHHH
Confidence            33468899999999853   3788999999999999999999999754332211111 1111111111235788999999


Q ss_pred             HHccCCCCCCCCCHHHHhcCCCc
Q 043828          319 KNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       319 ~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      .+||..+|.+|||+.+++.||||
T Consensus       246 ~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         246 LRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             HHHcCCCchhCCCHHHHHhCCCC
Confidence            99999999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=7.6e-40  Score=331.11  Aligned_cols=258  Identities=30%  Similarity=0.479  Sum_probs=203.8

Q ss_pred             CeeecceeccCCceEEEEEEEcc--CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC--CeE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIE--TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK--DAI  157 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~--~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~--~~~  157 (586)
                      +|.+.+.||+|+||.||+|.+..  ++..||+|.+.............+.+|+.+++.+ +||||+++++++.+.  ..+
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~   79 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL-KHENVVSLVEVFLEHADKSV   79 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhc-CCCCccceEEEEeCCCCceE
Confidence            58899999999999999999988  8999999999874422233346678899999999 899999999999988  889


Q ss_pred             EEEEeccCCCChHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeec-CCCCCceEEeeccc
Q 043828          158 YLVMELCEGGELFDRIVNK-----GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFAD-GSENSQLKAIDFGL  231 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~-~~~~~~vkl~Dfg~  231 (586)
                      |+||||+++ +|.+++...     ..+++..++.++.|++.||.|||+.+|+||||||+||+++. ++..+.+||+|||+
T Consensus        80 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~  158 (316)
T cd07842          80 YLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGL  158 (316)
T ss_pred             EEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence            999999975 676666432     36899999999999999999999999999999999999942 22378999999999


Q ss_pred             ccccCCCCc----eecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHH---------HHHHHH
Q 043828          232 SIFFKPGEQ----FCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEG---------IAHAII  296 (586)
Q Consensus       232 a~~~~~~~~----~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---------~~~~i~  296 (586)
                      +........    .....+++.|+|||++.+  .++.++|||||||++|+|++|.+||.+.....         ....+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (316)
T cd07842         159 ARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIF  238 (316)
T ss_pred             ccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHH
Confidence            886543221    233567899999998753  47889999999999999999999997544321         111110


Q ss_pred             hCcc---------------------CCCCCCCC------------CCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          297 RGKI---------------------DFERDPWP------------KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       297 ~~~~---------------------~~~~~~~~------------~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      ....                     ......++            ..+..+.++|.+||+.||++|||+.|+++||||
T Consensus       239 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         239 EVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             HHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            0000                     00001111            467789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=4.9e-40  Score=335.00  Aligned_cols=260  Identities=30%  Similarity=0.463  Sum_probs=212.1

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe----CC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED----KD  155 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~----~~  155 (586)
                      .++|++.+.||.|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.+ +||||+++++++..    ..
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~   81 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHF-KHDNIIAIRDILRPPGADFK   81 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhc-CCCCccCHHHhccccCCCCc
Confidence            3689999999999999999999999999999999875432 222346778899999999 79999999988763    35


Q ss_pred             eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      .+|+||||+. ++|.+++.....+++..+..++.||+.||.|||+++|+||||||+||++   +.++.+||+|||++...
T Consensus        82 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~dfg~~~~~  157 (334)
T cd07855          82 DVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLV---NEDCELRIGDFGMARGL  157 (334)
T ss_pred             eEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEecccccceee
Confidence            7899999995 6899988877789999999999999999999999999999999999999   56789999999998765


Q ss_pred             CCCC-----ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCc---------
Q 043828          236 KPGE-----QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK---------  299 (586)
Q Consensus       236 ~~~~-----~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~---------  299 (586)
                      ....     ......|+..|+|||++.+  .++.++||||+||++|+|++|.+||.+.+.......+....         
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~  237 (334)
T cd07855         158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLN  237 (334)
T ss_pred             cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhh
Confidence            3221     1124578999999999853  57899999999999999999999998765543333222110         


Q ss_pred             --------------cCCCCCC----CCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          300 --------------IDFERDP----WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       300 --------------~~~~~~~----~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                                    .......    ++.++..+.++|.+||+.+|.+|||+.+++.||||....
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~  301 (334)
T cd07855         238 RIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYH  301 (334)
T ss_pred             hhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhcc
Confidence                          0000111    245789999999999999999999999999999997643

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=2.2e-40  Score=328.53  Aligned_cols=254  Identities=28%  Similarity=0.450  Sum_probs=213.4

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      +.|+..+.||+|+||.||+|.+..++..||+|.+......  ...+.+.+|+.+++++ +||||+++++++..+..+|+|
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv   80 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAE--DEIEDIQQEITVLSQC-DSPYITRYYGSYLKGTKLWII   80 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccch--HHHHHHHHHHHHHHcC-CCCccHhhhcccccCCceEEE
Confidence            4688889999999999999999889999999998654322  2346789999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-  239 (586)
                      |||+++++|.+++.. ..+++..+..++.|++.|+.|||++|++|+||+|+||++   ..++.++|+|||++....... 
T Consensus        81 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06642          81 MEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             EEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEE---eCCCCEEEccccccccccCcch
Confidence            999999999988754 568999999999999999999999999999999999999   567889999999987654332 


Q ss_pred             ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHH
Q 043828          240 QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV  318 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  318 (586)
                      ......|+..|+|||.+.+ .++.++|||||||++|+|++|..||...........+......   .....++..+.++|
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li  233 (277)
T cd06642         157 KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPP---TLEGQYSKPFKEFV  233 (277)
T ss_pred             hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCC---CCCcccCHHHHHHH
Confidence            1223468889999999864 5788999999999999999999999766655544443332211   11134678899999


Q ss_pred             HHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          319 KNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       319 ~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .+||..+|.+|||+.+++.||||...
T Consensus       234 ~~~l~~~p~~Rp~~~~il~~~~~~~~  259 (277)
T cd06642         234 EACLNKDPRFRPTAKELLKHKFITRY  259 (277)
T ss_pred             HHHccCCcccCcCHHHHHHhHHHHHH
Confidence            99999999999999999999999764

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7e-41  Score=334.77  Aligned_cols=258  Identities=29%  Similarity=0.510  Sum_probs=222.9

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      -|..++.||-|+||.|.++....|...||+|.+++..+.....+..++.|-.||..- +++-||+||..|++.+++|+||
T Consensus       630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-Dn~WVVrLyySFQDkdnLYFVM  708 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVM  708 (1034)
T ss_pred             ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-CCcceEEEEEEeccCCceEEEE
Confidence            477888999999999999999899999999999887665555567788999999998 9999999999999999999999


Q ss_pred             eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc------
Q 043828          162 ELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF------  235 (586)
Q Consensus       162 E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~------  235 (586)
                      +|++||++..+|.+.+-+.|..++.++..+.+|+.+.|+.|+|||||||+||||   +.+|+|||.|||++.-.      
T Consensus       709 dYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILI---DrdGHIKLTDFGLCTGfRWTHds  785 (1034)
T KOG0608|consen  709 DYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHDS  785 (1034)
T ss_pred             eccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEE---ccCCceeeeeccccccceecccc
Confidence            999999999999999999999999999999999999999999999999999999   78999999999998632      


Q ss_pred             ---CCCC-----------c-----------------------eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHh
Q 043828          236 ---KPGE-----------Q-----------------------FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILL  277 (586)
Q Consensus       236 ---~~~~-----------~-----------------------~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll  277 (586)
                         ..+.           .                       ....+||+.|+|||++. ..|+..+|+||.|||||+|+
T Consensus       786 kYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~  865 (1034)
T KOG0608|consen  786 KYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEML  865 (1034)
T ss_pred             ccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHh
Confidence               1100           0                       01357999999999986 57999999999999999999


Q ss_pred             hCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCC---CHHHHhcCCCccCC
Q 043828          278 CGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRL---TLEEVLENPWIKND  344 (586)
Q Consensus       278 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rp---s~~eil~hp~~~~~  344 (586)
                      .|++||...++.+....+++=.-.+.....-++|+++.+||.+++. +++.|+   -++++..||||+.+
T Consensus       866 ~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHpfFkgI  934 (1034)
T KOG0608|consen  866 VGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHPFFKGI  934 (1034)
T ss_pred             hCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCcccccc
Confidence            9999999988877666655433333444456799999999999774 577887   67889999999975

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-39  Score=324.01  Aligned_cols=253  Identities=30%  Similarity=0.496  Sum_probs=210.8

Q ss_pred             eeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC--CeEEEE
Q 043828           83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK--DAIYLV  160 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~--~~~~iv  160 (586)
                      |++.+.||.|+||.||+|.+..+|+.+|+|++.... ........+.+|+.+++.+ +||||+++++++...  ...++|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv   78 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKL-RHPNIVRLKEIVTSKGKGSIYMV   78 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhc-cCCCeeeheeeEecCCCCcEEEE
Confidence            678899999999999999999999999999998764 2222345678899999999 899999999999988  899999


Q ss_pred             EeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||+++ +|.+++... ..+++..+..++.||+.||.|||+.|++|+||+|+||++   +.++.++|+|||++.......
T Consensus        79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~---~~~~~~~l~d~g~~~~~~~~~  154 (287)
T cd07840          79 FEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILI---NNDGVLKLADFGLARPYTKRN  154 (287)
T ss_pred             eccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE---cCCCCEEEccccceeeccCCC
Confidence            999975 888887665 579999999999999999999999999999999999999   567899999999988764432


Q ss_pred             --ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCC--------
Q 043828          240 --QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW--------  307 (586)
Q Consensus       240 --~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~--------  307 (586)
                        ......++..|+|||.+.+  .++.++||||||+++|+|++|..||...+.......+...........|        
T Consensus       155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (287)
T cd07840         155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPW  234 (287)
T ss_pred             cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchh
Confidence              2334567889999997753  5788999999999999999999999888776665555432211111111        


Q ss_pred             ------------------CC-CCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          308 ------------------PK-VSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       308 ------------------~~-~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                                        .. ++..+.++|.+||..+|.+||++.+++.||||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence                              12 27889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.7e-39  Score=316.65  Aligned_cols=254  Identities=27%  Similarity=0.473  Sum_probs=212.3

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeecccc--CChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC--Ce
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL--KTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK--DA  156 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~--~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~--~~  156 (586)
                      .+|++.+.||+|+||.||+|.+..+|..||+|.+.....  ........+.+|+.+++++ +||||+++++++.+.  ..
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~   80 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-RHDRIVQYYGCLRDPEEKK   80 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc-CCCCcceEEEEEEcCCCCE
Confidence            479999999999999999999999999999998854321  1233456788999999999 899999999998764  56


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +++++||+++++|.+++.....+++..+..++.|++.||.|||+++++|+||||+||++   +.++.++|+|||++....
T Consensus        81 ~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~  157 (264)
T cd06653          81 LSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILR---DSAGNVKLGDFGASKRIQ  157 (264)
T ss_pred             EEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE---cCCCCEEECccccccccc
Confidence            89999999999999999887789999999999999999999999999999999999999   567789999999987653


Q ss_pred             CC----CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCC
Q 043828          237 PG----EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS  311 (586)
Q Consensus       237 ~~----~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  311 (586)
                      ..    .......|+..|+|||.+.+ .++.++|||||||++|+|++|..||...........+......  ....+.++
T Consensus       158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~p~~~~  235 (264)
T cd06653         158 TICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTK--PMLPDGVS  235 (264)
T ss_pred             cccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCC--CCCCcccC
Confidence            21    12234568999999999864 5788999999999999999999999877665555544432221  22234688


Q ss_pred             HHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          312 KEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       312 ~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      ..+.++|.+||. +|..|||+.+++.|||.
T Consensus       236 ~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         236 DACRDFLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             HHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence            999999999999 57999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=4.2e-39  Score=324.90  Aligned_cols=254  Identities=29%  Similarity=0.454  Sum_probs=213.6

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      +.|...+.||+|+||+||+|++..+|..+++|++.............+.+|+.+++.+ +||||+++++++.+....|+|
T Consensus        21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv   99 (313)
T cd06633          21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-KHPNTIEYKGCYLKEHTAWLV   99 (313)
T ss_pred             HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEEEEE
Confidence            4577788899999999999999999999999999765444444456788899999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||+. ++|.+++.. ...+++..+..++.||+.||.|||++||+||||+|+||++   ..++.+||+|||++.....  
T Consensus       100 ~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili---~~~~~~kL~dfg~~~~~~~--  173 (313)
T cd06633         100 MEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASKSSP--  173 (313)
T ss_pred             EecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEE---CCCCCEEEeecCCCcccCC--
Confidence            99996 577777754 4568999999999999999999999999999999999999   5667899999998865332  


Q ss_pred             ceecccCCccccchhhhh----ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          240 QFCEIVGSPYYMAPEVLR----RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                       .....|+..|+|||++.    +.++.++|||||||++|+|++|..||...........+.....  +....+.++..++
T Consensus       174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~  250 (313)
T cd06633         174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS--PTLQSNEWTDSFR  250 (313)
T ss_pred             -CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC--CCCCccccCHHHH
Confidence             23456889999999973    4578899999999999999999999988776555555544332  2222345678899


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +|+.+||+.+|.+||++.+++.||||+..
T Consensus       251 ~li~~~l~~~P~~Rp~~~~~l~~~~~~~~  279 (313)
T cd06633         251 GFVDYCLQKIPQERPASAELLRHDFVRRD  279 (313)
T ss_pred             HHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence            99999999999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=1.5e-39  Score=323.13  Aligned_cols=248  Identities=23%  Similarity=0.366  Sum_probs=210.1

Q ss_pred             cCeeecceeccCCceEEEEEEEcc-----CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIE-----TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      ++|.+.+.||+|+||.||+|.+..     ++..+|+|++.....  ......+.+|+++++.+ +||||+++++++....
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~   81 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS--NDARKDFEREAELLTNF-QHENIVKFYGVCTEGD   81 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC--HHHHHHHHHHHHHHHhc-CCCCchheeeEEecCC
Confidence            579999999999999999998643     467899999865432  22346789999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhCC--------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCC
Q 043828          156 AIYLVMELCEGGELFDRIVNKG--------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSEN  221 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~--------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~  221 (586)
                      ..|+||||+++++|.+++...+              .+++..+..++.|++.||.|||++|++||||||+||++   +.+
T Consensus        82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili---~~~  158 (280)
T cd05049          82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLV---GYD  158 (280)
T ss_pred             CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEE---cCC
Confidence            9999999999999999987542              47888999999999999999999999999999999999   567


Q ss_pred             CceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHH
Q 043828          222 SQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAII  296 (586)
Q Consensus       222 ~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~  296 (586)
                      +.+||+|||++........   .....+++.|+|||++. ..++.++|||||||++|+|++ |..||...+.......+.
T Consensus       159 ~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~  238 (280)
T cd05049         159 LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT  238 (280)
T ss_pred             CeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence            8999999999876433221   12334578899999986 468899999999999999998 999999888888777777


Q ss_pred             hCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          297 RGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .+......   ..++..+.++|.+||..||.+|||+.|+++
T Consensus       239 ~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         239 QGRLLQRP---RTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             cCCcCCCC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            65543322   357899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.1e-39  Score=331.20  Aligned_cols=261  Identities=27%  Similarity=0.451  Sum_probs=213.2

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC-
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD-  155 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~-  155 (586)
                      ..+.++|++.+.||+|+||.||+|.+..+|..||+|++.+.. ........+.+|+.+++.+ +||||+++++++..+. 
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~   88 (343)
T cd07880          11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHM-KHENVIGLLDVFTPDLS   88 (343)
T ss_pred             hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhc-CCCCccceeeeecCCcc
Confidence            346678999999999999999999999999999999986532 2222345678999999999 8999999999987653 


Q ss_pred             -----eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecc
Q 043828          156 -----AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG  230 (586)
Q Consensus       156 -----~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg  230 (586)
                           .+++||||+ |++|..++. ...+++..+..++.|++.||.|||+.||+||||||+||++   +..+.++|+|||
T Consensus        89 ~~~~~~~~lv~e~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill---~~~~~~kl~dfg  163 (343)
T cd07880          89 LDRFHDFYLVMPFM-GTDLGKLMK-HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAV---NEDCELKILDFG  163 (343)
T ss_pred             ccccceEEEEEecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeecc
Confidence                 468999999 778887765 4579999999999999999999999999999999999999   567889999999


Q ss_pred             cccccCCCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCC------
Q 043828          231 LSIFFKPGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF------  302 (586)
Q Consensus       231 ~a~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~------  302 (586)
                      ++......  .....+++.|+|||.+.+  .++.++|+|||||++|+|++|..||...+.......+.......      
T Consensus       164 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  241 (343)
T cd07880         164 LARQTDSE--MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQ  241 (343)
T ss_pred             cccccccC--ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence            98765332  234567899999999864  47889999999999999999999998776554444433211110      


Q ss_pred             -----------------C----CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCCC
Q 043828          303 -----------------E----RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH  346 (586)
Q Consensus       303 -----------------~----~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~  346 (586)
                                       .    ...++.++..+.++|.+||..||.+|||+.+++.||||+....
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~  306 (343)
T cd07880         242 KLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD  306 (343)
T ss_pred             hhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence                             0    0112457888999999999999999999999999999987533

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=2.9e-39  Score=320.51  Aligned_cols=252  Identities=22%  Similarity=0.337  Sum_probs=208.6

Q ss_pred             cCeeecceeccCCceEEEEEEEcc-----CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIE-----TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      ++|.+.+.||+|++|.||+|.+..     ++..||+|.+....  .......+.+|+.+++.+ +||||+++++++....
T Consensus         6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~   82 (277)
T cd05036           6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKF-NHQNIVRLIGVSFERL   82 (277)
T ss_pred             HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCC
Confidence            579999999999999999999876     67889999875432  222345688899999999 8999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhCC-------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEee
Q 043828          156 AIYLVMELCEGGELFDRIVNKG-------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID  228 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~D  228 (586)
                      ..++||||++|++|.+++....       .+++..+..++.||+.||.|||+++++||||||+||++........+||+|
T Consensus        83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d  162 (277)
T cd05036          83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIAD  162 (277)
T ss_pred             CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEecc
Confidence            9999999999999999987643       488999999999999999999999999999999999996543455799999


Q ss_pred             cccccccCCCCce---ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCC
Q 043828          229 FGLSIFFKPGEQF---CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFE  303 (586)
Q Consensus       229 fg~a~~~~~~~~~---~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~  303 (586)
                      ||++.........   ....+++.|+|||++. ..++.++|||||||++|+|++ |..||...+.......+..... . 
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~-~-  240 (277)
T cd05036         163 FGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGR-L-  240 (277)
T ss_pred             CccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc-C-
Confidence            9999865322211   1223356799999986 568999999999999999997 9999998887776666554321 1 


Q ss_pred             CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       304 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                       .....++..+.+++.+||+.+|++|||+.++++|
T Consensus       241 -~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         241 -DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             -CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence             1124578999999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=5.3e-39  Score=314.76  Aligned_cols=253  Identities=30%  Similarity=0.519  Sum_probs=215.2

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC--CeEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK--DAIYL  159 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~--~~~~i  159 (586)
                      +|++.+.||+|++|.||+|.+..++..+++|++...... ....+.+.+|+.+++++ +||||+++++.+...  ..+++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~l   78 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSL-QHPNIVRYYGSERDEEKNTLNI   78 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHc-CCCCEeeEEEEEecCCCCeEEE
Confidence            488899999999999999999889999999998765432 33457889999999999 899999999999988  89999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |+||+++++|.+++.....+++..++.++.|++.||.|||+.+++|+||+|+||++   +.++.++|+|||.+.......
T Consensus        79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~  155 (260)
T cd06606          79 FLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILV---DSDGVVKLADFGCAKRLGDIE  155 (260)
T ss_pred             EEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE---cCCCCEEEcccccEEeccccc
Confidence            99999999999999887789999999999999999999999999999999999999   557899999999998765544


Q ss_pred             c---eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCC-HHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          240 Q---FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAET-EEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       240 ~---~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      .   .....++..|+|||.+.. .++.++||||||+++|+|++|..||.... .......+......  ......++..+
T Consensus       156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l  233 (260)
T cd06606         156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEP--PEIPEHLSEEA  233 (260)
T ss_pred             ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCC--cCCCcccCHHH
Confidence            2   345678899999999864 48889999999999999999999997765 22222222221111  11223568999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      .++|.+||..+|.+||++.+++.||||
T Consensus       234 ~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         234 KDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             HHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence            999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-42  Score=369.20  Aligned_cols=259  Identities=28%  Similarity=0.495  Sum_probs=222.0

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .+.-+|..+..||.|.||.||.|.+..+|...|+|-+...... ......+.+|..++..| +|||+|++|++-.+.+.+
T Consensus      1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~l-nHpNlV~YyGVEvHRekv 1309 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGL-NHPNLVRYYGVEVHREKV 1309 (1509)
T ss_pred             cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhc-cCccccccCceeecHHHH
Confidence            4456899999999999999999999999999999998765443 34456789999999999 999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      +|.||||+||+|.+.+...+-.++....-+..|++.|+.|||++|||||||||.||++   +.++.+|++|||.|..+.+
T Consensus      1310 ~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~L---d~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILL---DFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred             HHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceee---ecCCcEEeecccceeEecC
Confidence            9999999999999999888888888899999999999999999999999999999999   6778999999999988765


Q ss_pred             CC-----ceecccCCccccchhhhhc----cCCCcchHHHHHHHHHHHhhCCCCCCCCCHH-HHHHHHHhCccCCCCCCC
Q 043828          238 GE-----QFCEIVGSPYYMAPEVLRR----NYGPEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGKIDFERDPW  307 (586)
Q Consensus       238 ~~-----~~~~~~gt~~y~aPE~l~~----~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~  307 (586)
                      +.     .....+|||.|||||++.+    ....+.||||||||+.||+||+.||...+.+ ++...+..+..+.-   .
T Consensus      1387 ~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~---P 1463 (1509)
T KOG4645|consen 1387 NAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQI---P 1463 (1509)
T ss_pred             chhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCC---c
Confidence            43     2345789999999999953    3567899999999999999999999776554 33333444432211   1


Q ss_pred             CCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       308 ~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ..+|++.++||.+||..||+.|.++.|+|+|.|-+..
T Consensus      1464 ~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1464 ERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSC 1500 (1509)
T ss_pred             hhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccc
Confidence            3599999999999999999999999999999987753

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=6.5e-39  Score=312.80  Aligned_cols=251  Identities=33%  Similarity=0.537  Sum_probs=213.8

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|.+.+.||+|++|.||+|.+..++..+++|++.....   .....+.+|+.+++.+ +||||+++++++......++++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l~~   76 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKC-KHPNIVKYYGSYLKKDELWIVM   76 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEEEEE
Confidence            48889999999999999999988999999999976543   2356789999999999 7999999999999999999999


Q ss_pred             eccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCc
Q 043828          162 ELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ  240 (586)
Q Consensus       162 E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~  240 (586)
                      ||+++++|.+++... ..+++..+..++.|++.||.+||..|++||||+|+||++   +.++.++|+|||.+........
T Consensus        77 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~  153 (253)
T cd05122          77 EFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILL---TSDGEVKLIDFGLSAQLSDTKA  153 (253)
T ss_pred             ecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEE---ccCCeEEEeecccccccccccc
Confidence            999999999988775 579999999999999999999999999999999999999   5678899999999987655432


Q ss_pred             eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHH
Q 043828          241 FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK  319 (586)
Q Consensus       241 ~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  319 (586)
                      .....|+..|+|||.+.. .++.++||||||+++|+|++|..||...+................ .....++..+.++|.
T Consensus       154 ~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~  232 (253)
T cd05122         154 RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGL-RNPEKWSDEFKDFLK  232 (253)
T ss_pred             ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCc-CcccccCHHHHHHHH
Confidence            345678899999999863 578899999999999999999999987755554444443222111 111234889999999


Q ss_pred             HccCCCCCCCCCHHHHhcCCC
Q 043828          320 NMLDPNPYNRLTLEEVLENPW  340 (586)
Q Consensus       320 ~~L~~dp~~Rps~~eil~hp~  340 (586)
                      +||+.||++|||+.+++.|||
T Consensus       233 ~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         233 KCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             HHccCChhhCCCHHHHhcCCC
Confidence            999999999999999999999

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=2.3e-39  Score=330.35  Aligned_cols=262  Identities=31%  Similarity=0.463  Sum_probs=213.0

Q ss_pred             cccCeee-cceeccCCceEEEEEEEccCCcEEEEEEeeccccCChh-----------cHHHHHHHHHHHHhCCCCCCeeE
Q 043828           79 ILDKYTF-GKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEI-----------DIDDVRREVEIMRHLPKHPNIVT  146 (586)
Q Consensus        79 ~~~~y~~-~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~-----------~~~~~~~Ei~~l~~l~~hpnIv~  146 (586)
                      +.++|.. .+.||.|+||+||+|.+..+++.||+|++.........           ....+.+|+.+++.+ +||||++
T Consensus         6 ~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~   84 (335)
T PTZ00024          6 ISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI-KHENIMG   84 (335)
T ss_pred             cccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC-CCcceee
Confidence            3467765 57799999999999999999999999998654322100           012467899999999 8999999


Q ss_pred             EEEEEEeCCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEE
Q 043828          147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKA  226 (586)
Q Consensus       147 l~~~~~~~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl  226 (586)
                      +++++...+..|+||||+. ++|.+++.....+++..+..++.|++.||.|||++||+||||+|+||++   +..+.++|
T Consensus        85 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill---~~~~~~kl  160 (335)
T PTZ00024         85 LVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFI---NSKGICKI  160 (335)
T ss_pred             eeEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEE---CCCCCEEE
Confidence            9999999999999999996 5899999888889999999999999999999999999999999999999   56789999


Q ss_pred             eecccccccCC---------------CCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHH
Q 043828          227 IDFGLSIFFKP---------------GEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEE  289 (586)
Q Consensus       227 ~Dfg~a~~~~~---------------~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  289 (586)
                      +|||++.....               ........+++.|+|||.+.+  .++.++|||||||++|+|++|.+||...+..
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~  240 (335)
T PTZ00024        161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI  240 (335)
T ss_pred             CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            99999876541               111223456889999999864  4688999999999999999999999888776


Q ss_pred             HHHHHHHhCccCCCCC------------------------CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          290 GIAHAIIRGKIDFERD------------------------PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       290 ~~~~~i~~~~~~~~~~------------------------~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      +....+..........                        ..+..+..+.++|.+||+.+|++|||++++|.||||+...
T Consensus       241 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~  320 (335)
T PTZ00024        241 DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDP  320 (335)
T ss_pred             HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCC
Confidence            6555443311111000                        0124578899999999999999999999999999998653

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=100.00  E-value=6.7e-41  Score=296.80  Aligned_cols=255  Identities=27%  Similarity=0.511  Sum_probs=213.5

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC--Ce
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK--DA  156 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~--~~  156 (586)
                      ..++|++.+++|+|-|+.||.|.+..+.+.+++|++.+..      .+.+.+|+.||..|++||||++++++..++  ..
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk------kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt  109 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK------KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT  109 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH------HHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence            4579999999999999999999999999999999986543      367899999999999999999999999876  35


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      ..+|+||+.+.+...+.   ..++...++.++.+++.||.|||+.||+|||+||.|++++  .....++|+|||+|.++.
T Consensus       110 paLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmId--h~~rkLrlIDWGLAEFYH  184 (338)
T KOG0668|consen  110 PSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYH  184 (338)
T ss_pred             chhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeec--hhhceeeeeecchHhhcC
Confidence            77999999886654433   4588889999999999999999999999999999999996  566789999999999999


Q ss_pred             CCCceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCC-CCHHHHHHHHHh-------------Ccc
Q 043828          237 PGEQFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWA-ETEEGIAHAIIR-------------GKI  300 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~-~~~~~~~~~i~~-------------~~~  300 (586)
                      ++......+.+..|.-||.+-  +.|+..-|+|||||++..|+..+.||.. .+..+.+-.|.+             -.+
T Consensus       185 p~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i  264 (338)
T KOG0668|consen  185 PGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQI  264 (338)
T ss_pred             CCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHcc
Confidence            999888889999999999985  5689999999999999999999999853 333333333221             111


Q ss_pred             -----------CCCCCCCC---------CCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          301 -----------DFERDPWP---------KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       301 -----------~~~~~~~~---------~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                 .....+|.         -+++++.||+.++|..|.++|+||+|++.||||...
T Consensus       265 ~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~  328 (338)
T KOG0668|consen  265 DLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPV  328 (338)
T ss_pred             CCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHH
Confidence                       11122232         246899999999999999999999999999999753

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.9e-42  Score=308.77  Aligned_cols=259  Identities=30%  Similarity=0.525  Sum_probs=219.6

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEE-------
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYE-------  152 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~-------  152 (586)
                      ...|.-..+||+|.||.||+|+...+|+.||+|++-.+..+.... ....+|+.+|..| +|+|++.+++.+.       
T Consensus        16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfp-italreikiL~~l-kHenv~nliEic~tk~Tp~~   93 (376)
T KOG0669|consen   16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFP-ITALREIKILQLL-KHENVVNLIEICRTKATPTN   93 (376)
T ss_pred             chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCc-HHHHHHHHHHHHh-cchhHHHHHHHHhhccCCcc
Confidence            457888899999999999999999999999999876543333322 4557799999999 9999999988774       


Q ss_pred             -eCCeEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecc
Q 043828          153 -DKDAIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG  230 (586)
Q Consensus       153 -~~~~~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg  230 (586)
                       +...+|+||.+|+. +|.-++.+. .+++...+..++.+++.||.|+|...|+|||+||.|+|+   +.++.+||+|||
T Consensus        94 r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLI---t~dgilklADFG  169 (376)
T KOG0669|consen   94 RDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLI---TKDGILKLADFG  169 (376)
T ss_pred             cccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEE---cCCceEEeeccc
Confidence             23569999999975 888888764 679999999999999999999999999999999999999   678999999999


Q ss_pred             cccccCCC-----CceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCC
Q 043828          231 LSIFFKPG-----EQFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE  303 (586)
Q Consensus       231 ~a~~~~~~-----~~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~  303 (586)
                      +++.....     ..++..+.|.+|++||.+-  +.|+++.|||..|||+.+|.++.+.|.+.+....+..|..-..++.
T Consensus       170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t  249 (376)
T KOG0669|consen  170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT  249 (376)
T ss_pred             cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence            99765322     2345567799999999985  4799999999999999999999999999999998888876555555


Q ss_pred             CCCCCCC-------------------------------CHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          304 RDPWPKV-------------------------------SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       304 ~~~~~~~-------------------------------~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .+.||.+                               .+++.+|+.+||..||.+|++++++|+|.||+..
T Consensus       250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kd  321 (376)
T KOG0669|consen  250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKD  321 (376)
T ss_pred             cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcC
Confidence            5555542                               2378899999999999999999999999999865

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=3.5e-39  Score=321.73  Aligned_cols=247  Identities=24%  Similarity=0.376  Sum_probs=208.2

Q ss_pred             cCeeecceeccCCceEEEEEEEc-----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           81 DKYTFGKELGRGEFGITHQCFEI-----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      .+|.+.+.||+|+||.||+|...     .++..+|+|.+....   ......+.+|+.+++++ +||||+++++++...+
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~   80 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNL-QHEHIVKFYGVCVEGD   80 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---HHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCC
Confidence            47999999999999999999752     345678999885432   23346789999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhCC-------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCC
Q 043828          156 AIYLVMELCEGGELFDRIVNKG-------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENS  222 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~-------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~  222 (586)
                      .+|+||||+++++|.+++...+             .+++..+..++.|++.||.|||++|++||||||+||++   +..+
T Consensus        81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili---~~~~  157 (288)
T cd05093          81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GENL  157 (288)
T ss_pred             ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE---ccCC
Confidence            9999999999999999987543             38999999999999999999999999999999999999   5678


Q ss_pred             ceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHh
Q 043828          223 QLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIR  297 (586)
Q Consensus       223 ~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~  297 (586)
                      .+||+|||++........   .....+++.|+|||++. ..++.++|||||||++|+|++ |.+||...........+..
T Consensus       158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~  237 (288)
T cd05093         158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ  237 (288)
T ss_pred             cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence            999999999876533221   12234577899999986 468899999999999999998 9999988888887777776


Q ss_pred             CccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          298 GKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +.....   ...++..+.+|+.+||+.||.+|||+.+++.
T Consensus       238 ~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         238 GRVLQR---PRTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             CCcCCC---CCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            653221   1357889999999999999999999999965

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=6e-39  Score=314.28  Aligned_cols=252  Identities=31%  Similarity=0.562  Sum_probs=218.1

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|.+.+.||.|+||.||++.+..++..+|+|++...... ......+.+|+++++.+ +|||++++.+.+.....+++|+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~lv~   78 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS-EKEREDALNEVKILKKL-NHPNIIKYYESFEEKGKLCIVM   78 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC-hHHHHHHHHHHHHHHhc-CCCChhheEEEEecCCEEEEEE
Confidence            588999999999999999999989999999999765432 23456788999999999 7999999999999999999999


Q ss_pred             eccCCCChHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          162 ELCEGGELFDRIVNK----GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       162 E~~~gg~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      ||+++++|.+++...    ..+++..+..++.+++.||.|||+.|++|+||+|+||++   +..+.++|+|||++.....
T Consensus        79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~---~~~~~~~l~d~~~~~~~~~  155 (258)
T cd08215          79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFL---TSNGLVKLGDFGISKVLSS  155 (258)
T ss_pred             EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEE---cCCCcEEECCccceeeccc
Confidence            999999999988763    679999999999999999999999999999999999999   5678899999999876544


Q ss_pred             CC-ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          238 GE-QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       238 ~~-~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      .. ......|++.|+|||.+. ..++.++|+||+|+++|+|++|..||...........+........   ...++..+.
T Consensus       156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  232 (258)
T cd08215         156 TVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPI---PSQYSSELR  232 (258)
T ss_pred             CcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCC---CCCCCHHHH
Confidence            33 223457889999999875 4578899999999999999999999988877776666655543221   136789999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      +++.+||..+|++|||+.++|+||||
T Consensus       233 ~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         233 NLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             HHHHHHcCCChhhCcCHHHHhcCCCC
Confidence            99999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=6.1e-39  Score=316.25  Aligned_cols=251  Identities=26%  Similarity=0.514  Sum_probs=210.3

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||.|+||.||+|.+..+|+.||+|.+.............+.+|+.+++++ +|+||+++++++...+..++|
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~-~~~~i~~~~~~~~~~~~~~lv   80 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-DHPNVIKYLASFIENNELNIV   80 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCeeeeeeeeecCCeEEEE
Confidence            5799999999999999999999989999999998765444444457889999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          161 MELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      |||+++++|.+++..    ...+++..+..++.+++.||.|||+.||+||||+|+||++   +.++.++|+|||++....
T Consensus        81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~---~~~~~~~l~d~~~~~~~~  157 (267)
T cd08224          81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFI---TATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEE---CCCCcEEEeccceeeecc
Confidence            999999999998864    3458999999999999999999999999999999999999   567889999999987654


Q ss_pred             CCC-ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCC--HHHHHHHHHhCccCCCCCCCCCCCH
Q 043828          237 PGE-QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAET--EEGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       237 ~~~-~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      ... ......|++.|+|||.+. ..++.++|||||||++|+|++|..||....  .......+..+..  +..+.+.++.
T Consensus       158 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  235 (267)
T cd08224         158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDY--PPLPADHYSE  235 (267)
T ss_pred             CCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCC--CCCChhhcCH
Confidence            322 223456889999999886 458889999999999999999999996543  2233334333322  2222336788


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .+.++|.+||..+|++|||+.++++
T Consensus       236 ~~~~~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         236 ELRDLVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHH
Confidence            9999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=3.4e-39  Score=354.74  Aligned_cols=150  Identities=28%  Similarity=0.453  Sum_probs=137.8

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +++|.+++.||+|+||.||+|++..+++.||+|++.............+..|+.+++.+ +||||+++++++.....+||
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~l   81 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALS-KSPFIVHLYYSLQSANNVYL   81 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhc-CCCCcCeEEEEEEECCEEEE
Confidence            47899999999999999999999999999999999876554444557788999999998 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                      ||||+.|++|.+++...+.+++..++.++.||+.||.|||.++|+||||||+|||+   +..+.+||+|||+++
T Consensus        82 VmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl---~~~g~vkL~DFGls~  152 (669)
T cd05610          82 VMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLI---SNEGHIKLTDFGLSK  152 (669)
T ss_pred             EEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEE---cCCCCEEEEeCCCCc
Confidence            99999999999999887889999999999999999999999999999999999999   567899999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=1.1e-39  Score=331.60  Aligned_cols=253  Identities=19%  Similarity=0.259  Sum_probs=202.0

Q ss_pred             ceeccC--CceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEecc
Q 043828           87 KELGRG--EFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELC  164 (586)
Q Consensus        87 ~~lG~G--~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~  164 (586)
                      ..||+|  +||+||+|.+..+|+.||+|++...... ....+.+.+|+.+++.+ +||||++++++|..++.+|+||||+
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~~~~~~v~e~~   81 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT-EEHLKALQNEVVLSHFF-RHPNIMTSWTVFTTGSWLWVISPFM   81 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC-HHHHHHHHHHHHHHHhC-CCCCcceEeeeEecCCceEEEEecc
Confidence            456766  9999999999999999999998755332 23357889999999988 8999999999999999999999999


Q ss_pred             CCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCc--
Q 043828          165 EGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ--  240 (586)
Q Consensus       165 ~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~--  240 (586)
                      .+++|.+++...  ..+++..+..++.|++.||.|||++||+||||||+||++   ...+.++++||+.+........  
T Consensus        82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill---~~~~~~~~~~~~~~~~~~~~~~~~  158 (328)
T cd08226          82 AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILI---SGDGLVSLSGLSHLYSLVRNGQKA  158 (328)
T ss_pred             cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---eCCCcEEEechHHHhhhhccCccc
Confidence            999999988764  358999999999999999999999999999999999999   5667899999986543221110  


Q ss_pred             ------eecccCCccccchhhhhc---cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCC--------
Q 043828          241 ------FCEIVGSPYYMAPEVLRR---NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE--------  303 (586)
Q Consensus       241 ------~~~~~gt~~y~aPE~l~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~--------  303 (586)
                            .....++..|+|||++.+   .++.++||||+||++|+|++|.+||...................+        
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (328)
T cd08226         159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPC  238 (328)
T ss_pred             cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccch
Confidence                  011234667999999864   378899999999999999999999987665444433332211100        


Q ss_pred             -----------------------------------CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          304 -----------------------------------RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       304 -----------------------------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                                         .+....++..+.+||++||+.||.+|||++++|+||||++.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~  314 (328)
T cd08226         239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV  314 (328)
T ss_pred             hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence                                               00112356789999999999999999999999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=3e-39  Score=334.57  Aligned_cols=251  Identities=22%  Similarity=0.319  Sum_probs=202.7

Q ss_pred             ccCeeecceeccCCceEEEEEEEccC-----CcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIET-----GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~-----~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      .++|++++.||+|+||.||+|.+...     +..||+|++....  .....+.+.+|+.+++++..||||+++++++...
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~  113 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS  113 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence            46899999999999999999986432     3469999986543  2233467889999999995599999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhC----------------------------------------------------------
Q 043828          155 DAIYLVMELCEGGELFDRIVNK----------------------------------------------------------  176 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~----------------------------------------------------------  176 (586)
                      +.+|||||||++|+|.+++..+                                                          
T Consensus       114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (400)
T cd05105         114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE  193 (400)
T ss_pred             CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence            9999999999999999887542                                                          


Q ss_pred             --------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecC
Q 043828          177 --------------------------------------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADG  218 (586)
Q Consensus       177 --------------------------------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~  218 (586)
                                                            ..+++..+..++.||+.||.|||+.+|+||||||+|||+   
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill---  270 (400)
T cd05105         194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL---  270 (400)
T ss_pred             hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEE---
Confidence                                                  136777888999999999999999999999999999999   


Q ss_pred             CCCCceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHH
Q 043828          219 SENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAH  293 (586)
Q Consensus       219 ~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~  293 (586)
                      +.++.+||+|||++........   .....+++.|+|||++. ..++.++|||||||++|+|++ |..||..........
T Consensus       271 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~  350 (400)
T cd05105         271 AQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFY  350 (400)
T ss_pred             eCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHH
Confidence            4567899999999876533221   12345678899999886 468999999999999999997 999998765443333


Q ss_pred             HHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          294 AIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       294 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .........+.  ...++..+.++|.+||+.||++|||+.++.+
T Consensus       351 ~~~~~~~~~~~--~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         351 NKIKSGYRMAK--PDHATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             HHHhcCCCCCC--CccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence            33333322222  2467899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=9.3e-40  Score=332.56  Aligned_cols=259  Identities=32%  Similarity=0.486  Sum_probs=217.2

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC-----e
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD-----A  156 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~-----~  156 (586)
                      +|++.+.||.|++|.||+|.+..+|+.+|+|++..... .......+.+|+.+++.+ +||||+++++++....     .
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~   78 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD-DLIDAKRILREIKLLRHL-RHENIIGLLDILRPPSPEDFND   78 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc-cchhhhhHHHHHHHHHhc-CCcchhhhhhhhcccCcccccc
Confidence            58999999999999999999988999999999875431 223346788999999999 8999999999988765     7


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|+||||++ ++|.+++.....+++..+..++.||+.||.|||+.||+||||||+||++   +.++.++|+|||++....
T Consensus        79 ~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili---~~~~~~~L~dfg~~~~~~  154 (330)
T cd07834          79 VYIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILV---NSNCDLKICDFGLARGVD  154 (330)
T ss_pred             eEEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEcccCceEeec
Confidence            899999997 5898988887789999999999999999999999999999999999999   566899999999998765


Q ss_pred             CCC----ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCC-----
Q 043828          237 PGE----QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD-----  305 (586)
Q Consensus       237 ~~~----~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-----  305 (586)
                      ...    ......+++.|+|||++.+  .++.++|||||||++|+|++|.+||.+.+..+....+.......+..     
T Consensus       155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  234 (330)
T cd07834         155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFI  234 (330)
T ss_pred             ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhc
Confidence            432    2344568999999999863  57889999999999999999999998887766655554422111100     


Q ss_pred             ----------------------CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCCC
Q 043828          306 ----------------------PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH  346 (586)
Q Consensus       306 ----------------------~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~  346 (586)
                                            ..+.++..+.+||.+||+++|.+|||+.+++.||||+....
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~  297 (330)
T cd07834         235 TSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD  297 (330)
T ss_pred             cccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence                                  01346788999999999999999999999999999986543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=4.3e-39  Score=320.86  Aligned_cols=254  Identities=28%  Similarity=0.436  Sum_probs=208.3

Q ss_pred             eeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCC--CCCCeeEEEEEEEeCCe----
Q 043828           83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP--KHPNIVTYKEAYEDKDA----  156 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~--~hpnIv~l~~~~~~~~~----  156 (586)
                      |++.+.||.|+||.||+|.+..+++.||+|++....... .....+.+|+.+++++.  .||||+++++++.....    
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~   79 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEE-GIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL   79 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccc-hhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence            678899999999999999998889999999997543322 22345667888877763  59999999999988776    


Q ss_pred             -EEEEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          157 -IYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       157 -~~iv~E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                       ++++|||+.+ +|.+++....  .+++..+..++.|++.||.|||+.+++|+||+|+||++   +.++.+||+|||++.
T Consensus        80 ~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili---~~~~~~~l~dfg~~~  155 (287)
T cd07838          80 KLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILV---TSDGQVKIADFGLAR  155 (287)
T ss_pred             eeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEE---ccCCCEEEeccCcce
Confidence             9999999975 8888887643  58999999999999999999999999999999999999   566899999999998


Q ss_pred             ccCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccC-----CC----
Q 043828          234 FFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID-----FE----  303 (586)
Q Consensus       234 ~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~-----~~----  303 (586)
                      ............+++.|+|||++. ..++.++||||+||++|+|++|.+||...+..+....+......     ++    
T Consensus       156 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (287)
T cd07838         156 IYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVS  235 (287)
T ss_pred             eccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcc
Confidence            765444444556889999999986 45788999999999999999999999888776666555432110     00    


Q ss_pred             --------------CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          304 --------------RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       304 --------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                                    ....+.++..+.++|.+||+.||.+||++.+++.||||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         236 LPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             cchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence                          00012456788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=2.7e-39  Score=330.42  Aligned_cols=258  Identities=31%  Similarity=0.475  Sum_probs=208.3

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC----
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK----  154 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~----  154 (586)
                      +..+|.+.+.||.|+||.||+|.+..+|+.||+|++.....   ...+.+.+|+.+++.+ +||||+++++++...    
T Consensus         3 ~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~   78 (342)
T cd07854           3 LGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRL-DHDNIVKVYEVLGPSGSDL   78 (342)
T ss_pred             cCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhc-CCCcchhhHhhhccccccc
Confidence            34789999999999999999999999999999999865543   2346788899999999 999999999876543    


Q ss_pred             ----------CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCce
Q 043828          155 ----------DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQL  224 (586)
Q Consensus       155 ----------~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~v  224 (586)
                                ..+|+||||++ ++|.+++.. ..+++..+..++.||+.||.|||+.||+||||||+||+++  ..+..+
T Consensus        79 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~--~~~~~~  154 (342)
T cd07854          79 TEDVGSLTELNSVYIVQEYME-TDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFIN--TEDLVL  154 (342)
T ss_pred             ccccccccccceEEEEeeccc-ccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc--CCCceE
Confidence                      36899999997 588877754 4689999999999999999999999999999999999995  245679


Q ss_pred             EEeecccccccCCCC----ceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhC
Q 043828          225 KAIDFGLSIFFKPGE----QFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRG  298 (586)
Q Consensus       225 kl~Dfg~a~~~~~~~----~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~  298 (586)
                      ||+|||.+.......    ......|+..|+|||.+.  ..++.++|||||||++|+|++|..||...+.......+...
T Consensus       155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~  234 (342)
T cd07854         155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILES  234 (342)
T ss_pred             EECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence            999999987653221    112245788999999875  35788999999999999999999999877665544443321


Q ss_pred             cc----------------------CCCC----CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          299 KI----------------------DFER----DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       299 ~~----------------------~~~~----~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ..                      ....    ...+.++.++.+||.+||+.||.+|||+.++|.||||+..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~  306 (342)
T cd07854         235 VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY  306 (342)
T ss_pred             cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence            10                      0000    0123578899999999999999999999999999999853

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=3.2e-39  Score=323.44  Aligned_cols=250  Identities=25%  Similarity=0.353  Sum_probs=205.0

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCc--EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGE--TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~--~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ++|++.+.||+|+||.||+|+...++.  .+++|.+...  ........+.+|+.++.++.+||||+++++++...+.+|
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~   79 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF--ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY   79 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc--CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence            579999999999999999998877765  4677776532  122334678889999999977999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCC
Q 043828          159 LVMELCEGGELFDRIVNKG----------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENS  222 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~  222 (586)
                      +||||+++++|.+++....                .+++..+..++.|++.||.|||++||+||||||+|||+   +.++
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill---~~~~  156 (297)
T cd05089          80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLV---GENL  156 (297)
T ss_pred             EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEE---CCCC
Confidence            9999999999999986532                47889999999999999999999999999999999999   5678


Q ss_pred             ceEEeecccccccCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCcc
Q 043828          223 QLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKI  300 (586)
Q Consensus       223 ~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~  300 (586)
                      .+||+|||++..............+..|+|||++. ..++.++|||||||++|+|++ |..||...........+..+..
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~  236 (297)
T cd05089         157 ASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR  236 (297)
T ss_pred             eEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC
Confidence            89999999986432211111122345799999886 468899999999999999997 9999998888777776655422


Q ss_pred             CCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       301 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                       .  .....++..+.+||.+||..+|.+|||++++++.
T Consensus       237 -~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         237 -M--EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             -C--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence             1  1223578999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=5.4e-39  Score=320.10  Aligned_cols=258  Identities=31%  Similarity=0.533  Sum_probs=219.6

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ...+.|++...||+|++|.||+|.+..++..+++|++.....    ....+.+|+.+++.+ +||||+++++++......
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~   90 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDC-KHPNIVDYYDSYLVGDEL   90 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHC-CCCCeeEEEEEEEECCEE
Confidence            345679999999999999999999988899999999875432    346788999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      |+|+||+++++|.+++.... .++...+..++.|++.||.|||+.||+|+||+|+||++   +.++.++|+|||++....
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~  167 (286)
T cd06614          91 WVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILL---SKDGSVKLADFGFAAQLT  167 (286)
T ss_pred             EEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEE---cCCCCEEECccchhhhhc
Confidence            99999999999999998876 89999999999999999999999999999999999999   567889999999887654


Q ss_pred             CCC-ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          237 PGE-QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       237 ~~~-~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      ... ......+++.|+|||++. ..++.++|||||||++|+|++|..||...........+...... .......++..+
T Consensus       168 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l  246 (286)
T cd06614         168 KEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIP-PLKNPEKWSPEF  246 (286)
T ss_pred             cchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-CCcchhhCCHHH
Confidence            321 223345788999999986 45789999999999999999999999887766555554443322 112223478999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .++|.+||+.+|.+|||+.+++.||||+..
T Consensus       247 ~~li~~~l~~~p~~Rpt~~~il~~~~~~~~  276 (286)
T cd06614         247 KDFLNKCLVKDPEKRPSAEELLQHPFLKKA  276 (286)
T ss_pred             HHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence            999999999999999999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=9e-40  Score=349.84  Aligned_cols=257  Identities=29%  Similarity=0.487  Sum_probs=209.6

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe----
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED----  153 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~----  153 (586)
                      ....+|+.++.||+||||.||+|+++-+|+.||||+|....  .......+.+|+..|.+| +|||||+|+..|..    
T Consensus       476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArL-nHpNVVRYysAWVEs~~~  552 (1351)
T KOG1035|consen  476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARL-NHPNVVRYYSAWVESTAE  552 (1351)
T ss_pred             hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhc-CCcceeeeehhhhccCCc
Confidence            46678999999999999999999999999999999998765  344457899999999999 99999999876610    


Q ss_pred             --------------------------------------------------------------------------C-----
Q 043828          154 --------------------------------------------------------------------------K-----  154 (586)
Q Consensus       154 --------------------------------------------------------------------------~-----  154 (586)
                                                                                                .     
T Consensus       553 ~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~  632 (1351)
T KOG1035|consen  553 LTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSN  632 (1351)
T ss_pred             cccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccc
Confidence                                                                                      0     


Q ss_pred             ------------------------------------CeEEEEEeccCCCChHHHHHhCCCC-CHHHHHHHHHHHHHHHHH
Q 043828          155 ------------------------------------DAIYLVMELCEGGELFDRIVNKGHY-TERAAAAVGKTILRIVKV  197 (586)
Q Consensus       155 ------------------------------------~~~~iv~E~~~gg~L~~~l~~~~~~-~~~~~~~i~~qi~~~l~~  197 (586)
                                                          ..+||-||||+..+|.+++..+... ....+|+++++|+.||.|
T Consensus       633 tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaY  712 (1351)
T KOG1035|consen  633 TSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAY  712 (1351)
T ss_pred             ccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHH
Confidence                                                1268999999987777666655433 478899999999999999


Q ss_pred             HHHcCceeccCCCCceEeecCCCCCceEEeecccccccC-------------------CCCceecccCCccccchhhhhc
Q 043828          198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-------------------PGEQFCEIVGSPYYMAPEVLRR  258 (586)
Q Consensus       198 lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~-------------------~~~~~~~~~gt~~y~aPE~l~~  258 (586)
                      +|+.|||||||||.||++   ++...|||+|||+|....                   +....+..+||..|+|||++.+
T Consensus       713 IH~~giIHRDLKP~NIFL---d~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~  789 (1351)
T KOG1035|consen  713 IHDQGIIHRDLKPRNIFL---DSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD  789 (1351)
T ss_pred             HHhCceeeccCCcceeEE---cCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence            999999999999999999   678899999999998621                   1113456789999999999952


Q ss_pred             ----cCCCcchHHHHHHHHHHHhhCCCCCCCCC-HHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHH
Q 043828          259 ----NYGPEIDVWSAGVIIYILLCGVPPFWAET-EEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLE  333 (586)
Q Consensus       259 ----~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~  333 (586)
                          .|+.|+|+||||||+|||+.   ||...- ...++..+..+.++++...+..--+.-..+|+.||++||++||||.
T Consensus       790 ~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~  866 (1351)
T KOG1035|consen  790 TSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTAT  866 (1351)
T ss_pred             cccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHH
Confidence                59999999999999999984   565432 2344556666666666333334445678899999999999999999


Q ss_pred             HHhcCCCccC
Q 043828          334 EVLENPWIKN  343 (586)
Q Consensus       334 eil~hp~~~~  343 (586)
                      |+|++.||..
T Consensus       867 eLL~s~llpp  876 (1351)
T KOG1035|consen  867 ELLNSELLPP  876 (1351)
T ss_pred             HHhhccCCCc
Confidence            9999999975

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=5.4e-39  Score=316.03  Aligned_cols=246  Identities=22%  Similarity=0.367  Sum_probs=209.1

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      .+|.+.+.||+|+||.||+|.+..+++.+|+|++....    .....+.+|+.+++.+ +||||+++++++..++.+++|
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~----~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv   80 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYII   80 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc----hHHHHHHHHHHHHHhC-CCCChhheEEEEcCCCCcEEE
Confidence            46899999999999999999999999999999986432    2346788999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          161 MELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      |||+++++|.+++...  ..+++..+..++.|++.||.|||++|++||||||+||++   +.++.+||+|||++......
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~df~~~~~~~~~  157 (263)
T cd05052          81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGD  157 (263)
T ss_pred             EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCcEEeCCCccccccccc
Confidence            9999999999998753  358899999999999999999999999999999999999   56788999999998876433


Q ss_pred             Ccee--cccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          239 EQFC--EIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       239 ~~~~--~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      ....  ...+++.|+|||.+. ..++.++|||||||++|+|++ |..||.+....+....+.... ..  .....++..+
T Consensus       158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~  234 (263)
T cd05052         158 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY-RM--ERPEGCPPKV  234 (263)
T ss_pred             eeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-CC--CCCCCCCHHH
Confidence            2211  223456799999886 468889999999999999998 999998888777766665532 11  2224678999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhc
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .++|.+||+.||++|||+.++++
T Consensus       235 ~~li~~cl~~~p~~Rp~~~~l~~  257 (263)
T cd05052         235 YELMRACWQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             HHHHHHHccCCcccCCCHHHHHH
Confidence            99999999999999999999976

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=4.6e-39  Score=315.21  Aligned_cols=245  Identities=26%  Similarity=0.409  Sum_probs=206.7

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      .+|++.+.||+|+||.||++... .+..+|+|.+.....    ....+.+|+.+++++ +||||+++++++...+.+++|
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~iv   77 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAM----SEEDFIEEAKVMMKL-SHPKLVQLYGVCTQQKPLYIV   77 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCc----cHHHHHHHHHHHHHC-CCCCceeEEEEEccCCCEEEE
Confidence            46899999999999999999764 456799998764332    235788899999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||+++|+|.+++.. .+.+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||.+.......
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~kl~d~g~~~~~~~~~  154 (256)
T cd05114          78 TEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLV---SSTGVVKVSDFGMTRYVLDDE  154 (256)
T ss_pred             EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEE---cCCCeEEECCCCCccccCCCc
Confidence            999999999998875 3568999999999999999999999999999999999999   567789999999987654322


Q ss_pred             cee--cccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          240 QFC--EIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       240 ~~~--~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      ...  ...++..|+|||++. ..++.++||||||+++|+|++ |..||...+.......+..+......   ...+..+.
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~  231 (256)
T cd05114         155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRP---KLASMTVY  231 (256)
T ss_pred             eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCC---CCCCHHHH
Confidence            221  223556899999986 468899999999999999999 99999988888887777765432211   24678899


Q ss_pred             HHHHHccCCCCCCCCCHHHHhc
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +++.+||..+|.+|||++++++
T Consensus       232 ~li~~c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         232 EVMYSCWHEKPEGRPTFAELLR  253 (256)
T ss_pred             HHHHHHccCCcccCcCHHHHHH
Confidence            9999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.3e-39  Score=332.82  Aligned_cols=260  Identities=27%  Similarity=0.482  Sum_probs=214.1

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe-
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA-  156 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~-  156 (586)
                      .+.++|++.+.||+|++|.||+|++..+++.||+|++..... .......+.+|+.+++.+ +||||+++.+++...+. 
T Consensus        12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~   89 (343)
T cd07851          12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ-SAIHAKRTYRELRLLKHM-DHENVIGLLDVFTPASSL   89 (343)
T ss_pred             cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccc-hhhHHHHHHHHHHHHHhc-cCCCHHHHHHHhhccccc
Confidence            456789999999999999999999999999999999865422 222345677899999999 99999999988876554 


Q ss_pred             -----EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          157 -----IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       157 -----~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                           +|+|+||+ +++|.+++.. ..+++..+..++.|++.||.|||+.||+||||+|+||++   +.++.++|+|||+
T Consensus        90 ~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill---~~~~~~kL~dfg~  164 (343)
T cd07851          90 EDFQDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAV---NEDCELKILDFGL  164 (343)
T ss_pred             cccccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---CCCCCEEEccccc
Confidence                 89999999 6799888765 569999999999999999999999999999999999999   5678899999999


Q ss_pred             ccccCCCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCC------
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE------  303 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~------  303 (586)
                      +......  .....+++.|+|||.+.+  .++.++|||||||++|+|++|..||...........+.......+      
T Consensus       165 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  242 (343)
T cd07851         165 ARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQK  242 (343)
T ss_pred             ccccccc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Confidence            8865432  334568899999999854  578899999999999999999999988776665555443211100      


Q ss_pred             -----------------C----CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCCC
Q 043828          304 -----------------R----DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH  346 (586)
Q Consensus       304 -----------------~----~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~  346 (586)
                                       .    ..+..++..+.+||.+||+.+|.+|||+.+++.||||+....
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~  306 (343)
T cd07851         243 ISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHD  306 (343)
T ss_pred             ccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCC
Confidence                             0    011346889999999999999999999999999999987543

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=3.7e-39  Score=322.92  Aligned_cols=259  Identities=23%  Similarity=0.332  Sum_probs=209.6

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++.+.||+|+||.||+|.+..+++.||+|.+.+....  .....+..|+.++.++.+||||+++++++.+...+|
T Consensus        13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~   90 (296)
T cd06618          13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK--EENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVF   90 (296)
T ss_pred             CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh--HHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEE
Confidence            346899999999999999999999888999999999765322  123456678877777767999999999999999999


Q ss_pred             EEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          159 LVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHE-NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +||||+. ++|.+++.. ...+++..+..++.|++.||.|||+ .||+||||+|+||++   +.++.+||+|||++....
T Consensus        91 ~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill---~~~~~~kL~dfg~~~~~~  166 (296)
T cd06618          91 ICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILL---DASGNVKLCDFGISGRLV  166 (296)
T ss_pred             EEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEE---cCCCCEEECccccchhcc
Confidence            9999985 477666654 4578999999999999999999997 599999999999999   567899999999987664


Q ss_pred             CCCceecccCCccccchhhhhc-----cCCCcchHHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHhCccCCCCCCCCCC
Q 043828          237 PGEQFCEIVGSPYYMAPEVLRR-----NYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      .........+++.|+|||.+.+     .++.++||||||+++|+|++|..||..... .+....+....... .+....+
T Consensus       167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  245 (296)
T cd06618         167 DSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPS-LPPNEGF  245 (296)
T ss_pred             CCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCC-CCCCCCC
Confidence            4333344567889999999853     378899999999999999999999976433 23333333332211 1111247


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +..+.+||.+||..||.+||++++++.||||+..
T Consensus       246 ~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  279 (296)
T cd06618         246 SPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRY  279 (296)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHhcChhhhcc
Confidence            8899999999999999999999999999999864

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-38  Score=311.97  Aligned_cols=252  Identities=32%  Similarity=0.597  Sum_probs=217.0

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|++.+.||+|++|.||++.+..+++.|++|.+...... ....+.+.+|+++++++ +||||+++++++.+.+.+++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~   78 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNL-KHPNIVKYIGSIETSDSLYIIL   78 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhC-CCCCccEEEEEEEeCCEEEEEE
Confidence            588999999999999999999889999999999776533 23457889999999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCc-
Q 043828          162 ELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ-  240 (586)
Q Consensus       162 E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~-  240 (586)
                      ||+++++|.+++.....+++..+..++.|++.||.|||++||+||||+|+||++   +..+.++|+|||.+........ 
T Consensus        79 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~~~~~~  155 (254)
T cd06627          79 EYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILT---TKDGVVKLADFGVATKLNDVSKD  155 (254)
T ss_pred             ecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEE---CCCCCEEEeccccceecCCCccc
Confidence            999999999999888889999999999999999999999999999999999999   4578999999999987654332 


Q ss_pred             eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHH
Q 043828          241 FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK  319 (586)
Q Consensus       241 ~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  319 (586)
                      .....++..|+|||.+.+ .++.++||||+|+++|+|++|..||...........+.....   ......++..+.++|.
T Consensus       156 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~  232 (254)
T cd06627         156 DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDH---PPLPEGISPELKDFLM  232 (254)
T ss_pred             ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCC---CCCCCCCCHHHHHHHH
Confidence            234568899999999863 578899999999999999999999987765544444432221   1122467899999999


Q ss_pred             HccCCCCCCCCCHHHHhcCCCc
Q 043828          320 NMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       320 ~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      +||..+|++|||+.+++.||||
T Consensus       233 ~~l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         233 QCFQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             HHHhCChhhCcCHHHHhcCCCC
Confidence            9999999999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=4.9e-39  Score=318.84  Aligned_cols=250  Identities=20%  Similarity=0.301  Sum_probs=205.9

Q ss_pred             ccCeeecceeccCCceEEEEEEEc-----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEI-----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      .++|++.+.||+|+||.||+|.+.     .++..+|+|++....  .......+.+|+.+++.+ +||||+++++++...
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~   81 (277)
T cd05062           5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQG   81 (277)
T ss_pred             HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCC
Confidence            468999999999999999999764     245679999885432  222345688999999999 899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhCC----------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCce
Q 043828          155 DAIYLVMELCEGGELFDRIVNKG----------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQL  224 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~~----------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~v  224 (586)
                      ...++||||+++++|.+++....          .++...+..++.|++.||.|||+.|++||||||+||++   +.++.+
T Consensus        82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~---~~~~~~  158 (277)
T cd05062          82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTV  158 (277)
T ss_pred             CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEE---cCCCCE
Confidence            99999999999999999987532          25677889999999999999999999999999999999   567889


Q ss_pred             EEeecccccccCCCCce---ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCc
Q 043828          225 KAIDFGLSIFFKPGEQF---CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGK  299 (586)
Q Consensus       225 kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~  299 (586)
                      +|+|||++.........   ....+++.|+|||++. +.++.++|||||||++|+|++ |..||...+.......+....
T Consensus       159 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~  238 (277)
T cd05062         159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGG  238 (277)
T ss_pred             EECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence            99999998755332211   1234577899999986 468999999999999999998 789998888777776666544


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          300 IDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       300 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ....   ...++..+.+++.+||+.||.+|||+.+++++
T Consensus       239 ~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         239 LLDK---PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             cCCC---CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            3221   23578899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=1.1e-38  Score=322.60  Aligned_cols=254  Identities=30%  Similarity=0.467  Sum_probs=214.9

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ..|...+.||+|+||.||+|++..++..+|+|++.............+.+|+.+++.+ +|||++++++++..+...|+|
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv  103 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI-KHPNSIEYKGCYLREHTAWLV  103 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCeEEEE
Confidence            4588999999999999999999999999999998765443334456788999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||+.| +|.+.+.. ...+++..+..++.|++.||.|||+++|+||||+|+||++   +..+.++|+|||++...... 
T Consensus       104 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~---~~~~~~kl~dfg~~~~~~~~-  178 (317)
T cd06635         104 MEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASIASPA-  178 (317)
T ss_pred             EeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEE---CCCCCEEEecCCCccccCCc-
Confidence            999975 77776654 5668999999999999999999999999999999999999   56788999999988754332 


Q ss_pred             ceecccCCccccchhhhh----ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          240 QFCEIVGSPYYMAPEVLR----RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                        ....|++.|+|||.+.    +.++.++|||||||++|+|++|..||...........+.......  .....+++.++
T Consensus       179 --~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~  254 (317)
T cd06635         179 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPT--LQSNEWSDYFR  254 (317)
T ss_pred             --ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCC--CCCccccHHHH
Confidence              2356889999999873    357889999999999999999999998877666666555543322  12235788999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ++|.+||+.+|.+||++.++++|||+...
T Consensus       255 ~li~~~l~~~p~~Rpt~~~il~~~~~~~~  283 (317)
T cd06635         255 NFVDSCLQKIPQDRPTSEELLKHMFVLRE  283 (317)
T ss_pred             HHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence            99999999999999999999999999754

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=7.5e-39  Score=319.35  Aligned_cols=256  Identities=20%  Similarity=0.269  Sum_probs=208.9

Q ss_pred             ccCeeecceeccCCceEEEEEEEcc-----CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIE-----TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      .++|++.+.||+|+||.||+|.++.     .+..||+|.+....  .......+.+|+.+++.+ +||||+++++++...
T Consensus         5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~   81 (288)
T cd05061           5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGF-TCHHVVRLLGVVSKG   81 (288)
T ss_pred             HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCC
Confidence            4689999999999999999997542     34579999876432  122234577899999999 899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCce
Q 043828          155 DAIYLVMELCEGGELFDRIVNK----------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQL  224 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~v  224 (586)
                      ...|+||||+++|+|.+++...          ..++...+..++.|++.||.|||+++|+||||||+||++   +.++.+
T Consensus        82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili---~~~~~~  158 (288)
T cd05061          82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV---AHDFTV  158 (288)
T ss_pred             CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEE---cCCCcE
Confidence            9999999999999999999752          234567888999999999999999999999999999999   567889


Q ss_pred             EEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCc
Q 043828          225 KAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGK  299 (586)
Q Consensus       225 kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~  299 (586)
                      +|+|||++........   .....++..|+|||.+. +.++.++|||||||++|+|++ |..||.+....+....+..+.
T Consensus       159 ~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~  238 (288)
T cd05061         159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG  238 (288)
T ss_pred             EECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence            9999999875432221   11234567899999986 468999999999999999998 789998888777776665543


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc------CCCccCC
Q 043828          300 IDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE------NPWIKND  344 (586)
Q Consensus       300 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~------hp~~~~~  344 (586)
                      ....   ....++.+.+++.+||+.||++|||+.++++      ||||+..
T Consensus       239 ~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~  286 (288)
T cd05061         239 YLDQ---PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV  286 (288)
T ss_pred             CCCC---CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence            3211   1346789999999999999999999999987      8999753

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.4e-39  Score=314.76  Aligned_cols=245  Identities=34%  Similarity=0.654  Sum_probs=214.7

Q ss_pred             eccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCCCC
Q 043828           89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGE  168 (586)
Q Consensus        89 lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~gg~  168 (586)
                      ||.|+||.||+|.+..+++.+|+|.+.+...........+.+|+.+++.+ +||||+++++.++.+..+|+||||+++++
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~   79 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI-NHPFIVKLHYAFQTEEKLYLVLEYAPGGE   79 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHc-CCCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence            69999999999999888999999999877655544567889999999999 89999999999999999999999999999


Q ss_pred             hHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC-CceecccCC
Q 043828          169 LFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-EQFCEIVGS  247 (586)
Q Consensus       169 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~~~~~~~gt  247 (586)
                      |.+++.....+++..+..++.|++.||.|||+.+++|+||+|+||++   +..+.++|+|||++...... .......++
T Consensus        80 L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~  156 (250)
T cd05123          80 LFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILL---DADGHIKLTDFGLAKELSSEGSRTNTFCGT  156 (250)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEE---cCCCcEEEeecCcceecccCCCcccCCcCC
Confidence            99999888789999999999999999999999999999999999999   56778999999998776443 233456788


Q ss_pred             ccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCC
Q 043828          248 PYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNP  326 (586)
Q Consensus       248 ~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp  326 (586)
                      ..|+|||.+.+ .++.++|+||||+++|+|++|..||...........+......++    ..++..+.++|.+||..||
T Consensus       157 ~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~i~~~l~~~p  232 (250)
T cd05123         157 PEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFP----EFLSPEARDLISGLLQKDP  232 (250)
T ss_pred             ccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHhcCCH
Confidence            99999999864 478899999999999999999999988777666666665443333    3458899999999999999


Q ss_pred             CCCCCH---HHHhcCCCc
Q 043828          327 YNRLTL---EEVLENPWI  341 (586)
Q Consensus       327 ~~Rps~---~eil~hp~~  341 (586)
                      ++||++   +++++||||
T Consensus       233 ~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         233 TKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             hhCCCcccHHHHHhCCCC
Confidence            999999   999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=3.9e-39  Score=323.77  Aligned_cols=257  Identities=33%  Similarity=0.519  Sum_probs=209.7

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC---
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD---  155 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~---  155 (586)
                      ..++|++.+.||.|+||.||+|.+..+|+.||+|++....... .....+.+|+.+++++ +||||+++++++.+..   
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~-~~~~~~~~e~~~~~~l-~h~~i~~~~~~~~~~~~~~   82 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKE-GFPITAIREIKILRQL-NHRNIVNLKEIVTDKQDAL   82 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccccc-CchHHHHHHHHHHHhC-CCCCeeeeeheecCcchhh
Confidence            4578999999999999999999999999999999987653222 2235677899999999 8999999999987654   


Q ss_pred             -------eEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEe
Q 043828          156 -------AIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI  227 (586)
Q Consensus       156 -------~~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~  227 (586)
                             .+|+|+||+++ +|...+... ..+++..+..++.|++.||.|||+.||+||||+|+||++   +.++.+||+
T Consensus        83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili---~~~~~~kl~  158 (302)
T cd07864          83 DFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL---NNKGQIKLA  158 (302)
T ss_pred             hccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCcEEeC
Confidence                   79999999976 676766653 468999999999999999999999999999999999999   567899999


Q ss_pred             ecccccccCCCC--ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCC
Q 043828          228 DFGLSIFFKPGE--QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE  303 (586)
Q Consensus       228 Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~  303 (586)
                      |||++.......  ......+++.|+|||.+.+  .++.++|||||||++|+|++|.+||...+.......+........
T Consensus       159 dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~  238 (302)
T cd07864         159 DFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPC  238 (302)
T ss_pred             cccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence            999987654332  1223356788999998853  468899999999999999999999987766555544443211100


Q ss_pred             C--------------------------CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          304 R--------------------------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       304 ~--------------------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      .                          ..+..++..+.++|.+||..||.+|||+.+++.||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         239 PAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             hhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence            0                          1123578899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=7.5e-39  Score=313.64  Aligned_cols=246  Identities=22%  Similarity=0.331  Sum_probs=207.1

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|+||+||.+... .+..+|+|.+.....    ..+.+.+|+.+++++ +||||+++++++.....+|+|
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv   77 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMKL-SHEKLVQLYGVCTKQRPIYIV   77 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCcc----cHHHHHHHHHHHhcC-CCCCeeeEEEEEccCCCcEEE
Confidence            47999999999999999999764 345699998864432    236788999999999 899999999999998999999


Q ss_pred             EeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||+++++|.+++... ..+++..+..++.||+.||.|||+.|++|+||||+||++   +.++.+||+|||.+.......
T Consensus        78 ~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili---~~~~~~kl~d~g~~~~~~~~~  154 (256)
T cd05113          78 TEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLV---DDQGCVKVSDFGLSRYVLDDE  154 (256)
T ss_pred             EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE---cCCCCEEECCCccceecCCCc
Confidence            9999999999998764 468999999999999999999999999999999999999   567789999999987654332


Q ss_pred             ce--ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          240 QF--CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       240 ~~--~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      ..  ....++..|+|||.+. ..++.++|||||||++|+|++ |..||...+.......+..+...+..   ...+..+.
T Consensus       155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  231 (256)
T cd05113         155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRP---HLASEKVY  231 (256)
T ss_pred             eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCC---CCCCHHHH
Confidence            21  1233567799999986 468899999999999999998 99999888877777777665443222   24678999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcC
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +++.+||..+|.+|||+.+++.+
T Consensus       232 ~li~~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         232 AIMYSCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             HHHHHHcCCCcccCCCHHHHHHh
Confidence            99999999999999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=8.3e-39  Score=314.30  Aligned_cols=246  Identities=22%  Similarity=0.355  Sum_probs=207.9

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.++||+|+||.||+|.. .++..||+|.+.....    ..+.+.+|+.+++.+ +||||+++++++...+..|+
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   78 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYY-NNSTKVAVKTLKPGTM----SVQAFLEEANLMKTL-QHDKLVRLYAVVTKEEPIYI   78 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEe-cCCceEEEEEccCCch----hHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCcEE
Confidence            36899999999999999999985 4567799998764322    246788999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          160 VMELCEGGELFDRIVN--KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      ||||+++++|.+++..  ...++...+..++.|++.||.|||+.+++||||||+||++   +..+.++|+|||++.....
T Consensus        79 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~dfg~~~~~~~  155 (261)
T cd05072          79 ITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLV---SESLMCKIADFGLARVIED  155 (261)
T ss_pred             EEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEe---cCCCcEEECCCccceecCC
Confidence            9999999999998865  3468889999999999999999999999999999999999   5678899999999987643


Q ss_pred             CCce--ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          238 GEQF--CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       238 ~~~~--~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ....  ....++..|+|||.+. ..++.++|||||||++|+|++ |..||...........+.... ..  +....++..
T Consensus       156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~  232 (261)
T cd05072         156 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY-RM--PRMENCPDE  232 (261)
T ss_pred             CceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC-CC--CCCCCCCHH
Confidence            3211  2234567899999986 468889999999999999998 999998888777777766542 22  223468899


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhc
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +.+++.+||..+|++|||++++++
T Consensus       233 ~~~li~~~l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         233 LYDIMKTCWKEKAEERPTFDYLQS  256 (261)
T ss_pred             HHHHHHHHccCCcccCcCHHHHHH
Confidence            999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=6.4e-39  Score=313.36  Aligned_cols=242  Identities=24%  Similarity=0.333  Sum_probs=200.6

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG  166 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~g  166 (586)
                      +.||+|+||.||+|.+..+++.+|+|.+....  .......+.+|+.+++.+ +||||+++++++.....+|+||||+++
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~   77 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQG   77 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcCCCCeEEEEeeccC
Confidence            46999999999999999999999999876432  222346788999999999 899999999999999999999999999


Q ss_pred             CChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCcee---
Q 043828          167 GELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---  242 (586)
Q Consensus       167 g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~---  242 (586)
                      ++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||++..........   
T Consensus        78 ~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~  154 (252)
T cd05084          78 GDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLV---TEKNVLKISDFGMSREEEDGVYASTGG  154 (252)
T ss_pred             CcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEE---cCCCcEEECccccCcccccccccccCC
Confidence            9999998764 458999999999999999999999999999999999999   567789999999987644321111   


Q ss_pred             cccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHH
Q 043828          243 EIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN  320 (586)
Q Consensus       243 ~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  320 (586)
                      ...++..|+|||.+. +.++.++|||||||++|+|++ |..||...+.......+..... .  .....++..+.+|+.+
T Consensus       155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~li~~  231 (252)
T cd05084         155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVR-L--PCPELCPDAVYRLMER  231 (252)
T ss_pred             CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC-C--CCcccCCHHHHHHHHH
Confidence            112245699999986 468889999999999999997 8999987776665555554321 1  2224578999999999


Q ss_pred             ccCCCCCCCCCHHHHhc
Q 043828          321 MLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       321 ~L~~dp~~Rps~~eil~  337 (586)
                      ||..+|++|||+.++++
T Consensus       232 ~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         232 CWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             HcCCChhhCcCHHHHHH
Confidence            99999999999999975

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=4e-39  Score=325.07  Aligned_cols=256  Identities=27%  Similarity=0.460  Sum_probs=206.5

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC-----
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK-----  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~-----  154 (586)
                      .++|++.+.||.|+||.||+|.+..+++.+|+|++........ ....+.+|+.+++.+ +||||+++++++...     
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~   84 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDG-FPITALREIKILKKL-KHPNVVPLIDMAVERPDKSK   84 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCC-cchhHHHHHHHHHhc-CCCCccchhhheeccccccc
Confidence            5799999999999999999999999999999999876543222 224567899999999 899999999887543     


Q ss_pred             ---CeEEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecc
Q 043828          155 ---DAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG  230 (586)
Q Consensus       155 ---~~~~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg  230 (586)
                         ..+|+||||+.+ +|...+.. ...+++..+..++.|++.||.|||++||+||||||+||++   +.++.++|+|||
T Consensus        85 ~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg  160 (311)
T cd07866          85 RKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI---DNQGILKIADFG  160 (311)
T ss_pred             ccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEECcCc
Confidence               357999999965 67666654 4579999999999999999999999999999999999999   667899999999


Q ss_pred             cccccCCCC------------ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHH
Q 043828          231 LSIFFKPGE------------QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAII  296 (586)
Q Consensus       231 ~a~~~~~~~------------~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~  296 (586)
                      ++.......            ......|++.|+|||.+.+  .++.++|||||||++|+|++|.+||.+.+.......+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~  240 (311)
T cd07866         161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF  240 (311)
T ss_pred             cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            987643221            1123467889999998753  47889999999999999999999998877765555443


Q ss_pred             hCccCCCC--------------------------CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          297 RGKIDFER--------------------------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       297 ~~~~~~~~--------------------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      ........                          ..+..+++.+.+||.+||..||.+|||+.+++.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            32111000                          0112355788999999999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.1e-39  Score=340.94  Aligned_cols=248  Identities=24%  Similarity=0.415  Sum_probs=214.4

Q ss_pred             ccCeeecceeccCCceEEEEEEEc-----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEI-----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      ..+.++.+.||+|+||+||+|...     .....||||.++...  ......+|++|++++..| +|||||+|+|++..+
T Consensus       485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l-~H~nIVrLlGVC~~~  561 (774)
T KOG1026|consen  485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAEL-QHPNIVRLLGVCREG  561 (774)
T ss_pred             hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhc-cCCCeEEEEEEEccC
Confidence            346778899999999999999753     234579999886554  233467899999999999 999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhCC--------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCC
Q 043828          155 DAIYLVMELCEGGELFDRIVNKG--------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSE  220 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~~--------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~  220 (586)
                      +.+|+|+|||..|+|.++|+...              +++..+...|+.||+.||.||-++.+|||||-..|+||   .+
T Consensus       562 ~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV---ge  638 (774)
T KOG1026|consen  562 DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV---GE  638 (774)
T ss_pred             CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee---cc
Confidence            99999999999999999997421              27888999999999999999999999999999999999   67


Q ss_pred             CCceEEeecccccccCCCCceec---ccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHH
Q 043828          221 NSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAI  295 (586)
Q Consensus       221 ~~~vkl~Dfg~a~~~~~~~~~~~---~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i  295 (586)
                      +..|||+|||+++..-..+.+..   ..-..+|||||.+. +.|+.+|||||+||+|||+++ |..||++.+.+++++.|
T Consensus       639 ~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i  718 (774)
T KOG1026|consen  639 NLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECI  718 (774)
T ss_pred             ceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHH
Confidence            89999999999987654433321   12356899999775 789999999999999999998 99999999999999999


Q ss_pred             HhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHh
Q 043828          296 IRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVL  336 (586)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil  336 (586)
                      ..+.. ++.+  ..+|.++.+|+..||+.+|++||++.||-
T Consensus       719 ~~g~l-L~~P--e~CP~~vY~LM~~CW~~~P~~RPsF~eI~  756 (774)
T KOG1026|consen  719 RAGQL-LSCP--ENCPTEVYSLMLECWNENPKRRPSFKEIH  756 (774)
T ss_pred             HcCCc-ccCC--CCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence            99988 5444  57899999999999999999999999984

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=2.9e-39  Score=328.96  Aligned_cols=250  Identities=25%  Similarity=0.376  Sum_probs=200.9

Q ss_pred             cCeeecceeccCCceEEEEEEEc-----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe-C
Q 043828           81 DKYTFGKELGRGEFGITHQCFEI-----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED-K  154 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~-~  154 (586)
                      ++|++.+.||+|+||.||+|...     .+++.||+|++....  .......+.+|+.+++++.+||||+++++++.. +
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~   84 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGACTKPG   84 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence            58999999999999999999753     345789999986433  222345678899999999789999999998764 4


Q ss_pred             CeEEEEEeccCCCChHHHHHhC----------------------------------------------------------
Q 043828          155 DAIYLVMELCEGGELFDRIVNK----------------------------------------------------------  176 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~----------------------------------------------------------  176 (586)
                      ..++++|||+++++|.+++...                                                          
T Consensus        85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (337)
T cd05054          85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE  164 (337)
T ss_pred             CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence            6789999999999999888542                                                          


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCc---eecccCCccc
Q 043828          177 ---GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYY  250 (586)
Q Consensus       177 ---~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y  250 (586)
                         ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.++|+|||++..+.....   .....++..|
T Consensus       165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill---~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y  241 (337)
T cd05054         165 LYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW  241 (337)
T ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE---eCCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence               257889999999999999999999999999999999999   4567899999999987533221   1234456789


Q ss_pred             cchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHH-HHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCC
Q 043828          251 MAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIA-HAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPY  327 (586)
Q Consensus       251 ~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~  327 (586)
                      +|||++. ..++.++|||||||++|+|++ |..||.+....+.. ..+..+. ....  ....++.+.+++.+||+.+|.
T Consensus       242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~l~~~cl~~~p~  318 (337)
T cd05054         242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGT-RMRA--PEYATPEIYSIMLDCWHNNPE  318 (337)
T ss_pred             cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccC-CCCC--CccCCHHHHHHHHHHccCChh
Confidence            9999885 568999999999999999998 99999775443333 3333322 2211  135688999999999999999


Q ss_pred             CCCCHHHHhcC
Q 043828          328 NRLTLEEVLEN  338 (586)
Q Consensus       328 ~Rps~~eil~h  338 (586)
                      +||++.++++|
T Consensus       319 ~RPs~~ell~~  329 (337)
T cd05054         319 DRPTFSELVEI  329 (337)
T ss_pred             hCcCHHHHHHH
Confidence            99999999985

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=8.9e-39  Score=313.81  Aligned_cols=243  Identities=26%  Similarity=0.396  Sum_probs=209.5

Q ss_pred             ceeccCCceEEEEEEEccC---CcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEec
Q 043828           87 KELGRGEFGITHQCFEIET---GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMEL  163 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~  163 (586)
                      +.||+|+||.||+|.+...   +..+++|.+.......  ....+.+|+.+++.+ +||||+++++++.....+++||||
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~   77 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKL-GHPNVVRLLGVCTEEEPLYLVLEY   77 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhc-CCCChheeeeeecCCCceEEEEEe
Confidence            4699999999999998765   8899999987654322  357889999999999 699999999999999999999999


Q ss_pred             cCCCChHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          164 CEGGELFDRIVNK---------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       164 ~~gg~L~~~l~~~---------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      +++++|.+++...         ..+++..++.++.|++.||.|||+++|+||||+|+||++   +.++.+||+|||.+..
T Consensus        78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili---~~~~~~~l~dfg~~~~  154 (262)
T cd00192          78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLV---GEDLVVKISDFGLSRD  154 (262)
T ss_pred             ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEE---CCCCcEEEcccccccc
Confidence            9999999999875         779999999999999999999999999999999999999   5678999999999987


Q ss_pred             cCCCC---ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCC
Q 043828          235 FKPGE---QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPK  309 (586)
Q Consensus       235 ~~~~~---~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  309 (586)
                      .....   ......+++.|+|||.+.. .++.++|||||||++|+|++ |..||...........+..+.. ..  ....
T Consensus       155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~--~~~~  231 (262)
T cd00192         155 VYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYR-LP--KPEY  231 (262)
T ss_pred             cccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-CC--CCcc
Confidence            65432   2234567889999999864 68899999999999999999 6999998888877777765332 11  2245


Q ss_pred             CCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          310 VSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ++.++.+++.+||..+|.+|||+.+++++
T Consensus       232 ~~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         232 CPDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             CChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            78999999999999999999999999875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=8.9e-39  Score=318.03  Aligned_cols=249  Identities=18%  Similarity=0.324  Sum_probs=206.7

Q ss_pred             cCeeecceeccCCceEEEEEEEc----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           81 DKYTFGKELGRGEFGITHQCFEI----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      .+|++.+.||+|+||+||+|...    .++..+|+|.+....  .......+.+|+.+++.+ +||||+++++++.....
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~   81 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAEL-HHPNIVCLLGVVTQEQP   81 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEecCCc
Confidence            57899999999999999999853    355789999886432  222346788999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhC-----------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCC
Q 043828          157 IYLVMELCEGGELFDRIVNK-----------------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS  219 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~-----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~  219 (586)
                      .|+||||+++++|.+++...                 ..+++..+..++.|++.||.|||+++|+||||||+||++   +
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili---~  158 (283)
T cd05090          82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILI---G  158 (283)
T ss_pred             eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEE---c
Confidence            99999999999999988532                 237888899999999999999999999999999999999   5


Q ss_pred             CCCceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHH
Q 043828          220 ENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHA  294 (586)
Q Consensus       220 ~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~  294 (586)
                      ..+.+||+|||++........   .....++..|+|||++. ..++.++|||||||++|+|++ |..||.+.+...+...
T Consensus       159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~  238 (283)
T cd05090         159 EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEM  238 (283)
T ss_pred             CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence            667899999999976533221   22344567899999986 468999999999999999998 9999988877766666


Q ss_pred             HHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          295 IIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       295 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +......   +....++..+.+++.+||+.||.+||++.+++++
T Consensus       239 ~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         239 VRKRQLL---PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             HHcCCcC---CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            6554422   1224578999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-39  Score=329.31  Aligned_cols=253  Identities=25%  Similarity=0.357  Sum_probs=214.6

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCc---E-EEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGE---T-YACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~---~-~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      ..++-.+.++||+|+||.||+|..+..+.   . ||+|............+..+.+|.++|+.+ +|||||++||+....
T Consensus       155 ~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l-~H~NVVr~yGVa~~~  233 (474)
T KOG0194|consen  155 SHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQL-NHPNVVRFYGVAVLE  233 (474)
T ss_pred             eccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEcCC
Confidence            34566777999999999999998765432   3 788888754434455567899999999999 999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          155 DAIYLVMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                      ..++||||+|+||+|.++|+..+ .++......++.+.+.||+|||+++++||||-..|+|+   ..+..+||+|||+++
T Consensus       234 ~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~---~~~~~vKISDFGLs~  310 (474)
T KOG0194|consen  234 EPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLY---SKKGVVKISDFGLSR  310 (474)
T ss_pred             CccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHhee---cCCCeEEeCcccccc
Confidence            99999999999999999999876 49999999999999999999999999999999999999   566678999999988


Q ss_pred             ccCCCCcee-cccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          234 FFKPGEQFC-EIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       234 ~~~~~~~~~-~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      ....-.... ...-...|+|||.+. +-|+.++|||||||++||+++ |..||.+....++...|....+..+.+  ...
T Consensus       311 ~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~--~~~  388 (474)
T KOG0194|consen  311 AGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIP--SKT  388 (474)
T ss_pred             CCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCC--CCC
Confidence            654111111 112356899999997 569999999999999999999 889999999999999997766655544  367


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +..+..++.+||..+|+.|||+.++.+
T Consensus       389 p~~~~~~~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  389 PKELAKVMKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             HHHHHHHHHHhccCChhhccCHHHHHH
Confidence            889999999999999999999999875

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=9.1e-39  Score=321.79  Aligned_cols=254  Identities=28%  Similarity=0.452  Sum_probs=213.0

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ..|...+.||.|+||.||+|++..++..+|+|.+.............+.+|+.+++.+ +|||++++++++......|+|
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv   93 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWLV   93 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCeeEEE
Confidence            4688889999999999999999999999999998754333333446778899999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||+. |+|.+++.. ...+++..+..++.|++.||.|||+++++||||+|+||++   +..+.++|+|||++....+. 
T Consensus        94 ~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~---~~~~~~kl~dfg~~~~~~~~-  168 (308)
T cd06634          94 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPA-  168 (308)
T ss_pred             EEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEE---CCCCcEEECCcccceeecCc-
Confidence            99996 577776654 4568999999999999999999999999999999999999   55688999999998765432 


Q ss_pred             ceecccCCccccchhhhh----ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          240 QFCEIVGSPYYMAPEVLR----RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                        ....|++.|+|||.+.    +.++.++|||||||++|+|++|..||...........+.......  .....++..+.
T Consensus       169 --~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  244 (308)
T cd06634         169 --NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA--LQSGHWSEYFR  244 (308)
T ss_pred             --ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCC--cCcccccHHHH
Confidence              2346889999999974    357889999999999999999999998776655554444433221  11235788999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +||.+||..+|.+||++.++++|||+...
T Consensus       245 ~li~~cl~~~P~~Rp~~~~ll~~~~~~~~  273 (308)
T cd06634         245 NFVDSCLQKIPQDRPTSEVLLKHRFVLRE  273 (308)
T ss_pred             HHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence            99999999999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=7.9e-39  Score=325.78  Aligned_cols=258  Identities=32%  Similarity=0.458  Sum_probs=208.1

Q ss_pred             CeeecceeccCCceEEEEEEEccC--CcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe----CC
Q 043828           82 KYTFGKELGRGEFGITHQCFEIET--GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED----KD  155 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~--~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~----~~  155 (586)
                      +|++.+.||+|+||.||+|.+..+  +..||+|++.... ........+.+|+.+++++.+||||+++++....    ..
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~   79 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN   79 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence            588999999999999999999877  8899999986432 2222345678899999999779999999987542    24


Q ss_pred             eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      .+|+++||+. ++|.+++.....+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|||++...
T Consensus        80 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili---~~~~~~kl~Dfg~a~~~  155 (332)
T cd07857          80 ELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLV---NADCELKICDFGLARGF  155 (332)
T ss_pred             cEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEE---cCCCCEEeCcCCCceec
Confidence            6889999985 6899999888889999999999999999999999999999999999999   56788999999999765


Q ss_pred             CCCC-----ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc--------
Q 043828          236 KPGE-----QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI--------  300 (586)
Q Consensus       236 ~~~~-----~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~--------  300 (586)
                      ....     ......|++.|+|||.+.+  .++.++||||+||++|+|++|.+||...+.......+.....        
T Consensus       156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  235 (332)
T cd07857         156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLS  235 (332)
T ss_pred             ccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence            4321     1233578999999998753  578999999999999999999999987664443333222100        


Q ss_pred             ---------------CCC----CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          301 ---------------DFE----RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       301 ---------------~~~----~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                     ..+    ...++.++..+.+|+.+||+.||.+|||+.+++.|||++..
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~  298 (332)
T cd07857         236 RIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIW  298 (332)
T ss_pred             hhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence                           000    11234568899999999999999999999999999999754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=4.3e-39  Score=321.13  Aligned_cols=256  Identities=27%  Similarity=0.514  Sum_probs=210.1

Q ss_pred             CeeecceeccCCceEEEEEEEc---cCCcEEEEEEeeccccC-ChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           82 KYTFGKELGRGEFGITHQCFEI---ETGETYACKKIAKEKLK-TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~---~~~~~~avK~i~~~~~~-~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      +|++.+.||+|+||.||+|.+.   .++..||+|.+.+.... .......+.+|+.++.++.+||||+++++.+..+..+
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            4889999999999999999864   46788999998754322 1223456788999999997799999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |+||||+++++|.+++.....+++..+..++.|++.+|.|||+.+++||||+|+||++   +.++.++|+|||++.....
T Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~---~~~~~~~l~dfg~~~~~~~  157 (288)
T cd05583          81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL---DSEGHVVLTDFGLSKEFLA  157 (288)
T ss_pred             EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE---CCCCCEEEEECcccccccc
Confidence            9999999999999999887789999999999999999999999999999999999999   5677899999999876543


Q ss_pred             CCc--eecccCCccccchhhhhcc---CCCcchHHHHHHHHHHHhhCCCCCCCCC----HHHHHHHHHhCccCCCCCCCC
Q 043828          238 GEQ--FCEIVGSPYYMAPEVLRRN---YGPEIDVWSAGVIIYILLCGVPPFWAET----EEGIAHAIIRGKIDFERDPWP  308 (586)
Q Consensus       238 ~~~--~~~~~gt~~y~aPE~l~~~---~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~  308 (586)
                      ...  .....|++.|+|||.+.+.   ++.++||||||+++|+|++|..||....    .......+......    ...
T Consensus       158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~  233 (288)
T cd05583         158 EEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPP----FPK  233 (288)
T ss_pred             ccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCC----CCc
Confidence            322  1234689999999998642   6789999999999999999999996432    22333333333222    223


Q ss_pred             CCCHHHHHHHHHccCCCCCCCCC---HHHHhcCCCccCC
Q 043828          309 KVSKEAKELVKNMLDPNPYNRLT---LEEVLENPWIKND  344 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~Rps---~~eil~hp~~~~~  344 (586)
                      .++..+.++|.+||+.||++|||   +.++|+||||++.
T Consensus       234 ~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~  272 (288)
T cd05583         234 TMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI  272 (288)
T ss_pred             ccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence            47889999999999999999998   5678999999875

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=1.1e-38  Score=319.58  Aligned_cols=252  Identities=21%  Similarity=0.268  Sum_probs=207.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCC----------------cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETG----------------ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN  143 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~----------------~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpn  143 (586)
                      .++|++++.||+|+||.||+|.+...+                ..+|+|++.....  ....+.+.+|+.+++++ +|||
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l-~~~~   80 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS--DNAREDFLKEVKILSRL-SDPN   80 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC--HHHHHHHHHHHHHHHhc-CCCC
Confidence            358999999999999999999876543                4579998865532  23356788999999999 8999


Q ss_pred             eeEEEEEEEeCCeEEEEEeccCCCChHHHHHhCC-----------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCc
Q 043828          144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG-----------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPEN  212 (586)
Q Consensus       144 Iv~l~~~~~~~~~~~iv~E~~~gg~L~~~l~~~~-----------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~N  212 (586)
                      |+++++++..++.+++||||+++++|.+++....           .+++..+..++.|++.||.|||++||+||||||+|
T Consensus        81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N  160 (296)
T cd05051          81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN  160 (296)
T ss_pred             EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence            9999999999999999999999999999987755           68999999999999999999999999999999999


Q ss_pred             eEeecCCCCCceEEeecccccccCCCCc---eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhh--CCCCCCCC
Q 043828          213 FLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLC--GVPPFWAE  286 (586)
Q Consensus       213 ill~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~--g~~pf~~~  286 (586)
                      |++   +..+.++|+|||++........   .....+++.|+|||.+.+ .++.++|||||||++|+|++  |..||...
T Consensus       161 ili---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~  237 (296)
T cd05051         161 CLV---GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHL  237 (296)
T ss_pred             eee---cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCc
Confidence            999   5668999999999876533221   223456778999999864 78999999999999999998  78899877


Q ss_pred             CHHHHHHHHHhC----ccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          287 TEEGIAHAIIRG----KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       287 ~~~~~~~~i~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +.......+...    .........+.++.++.+++.+||+.||.+|||+.++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         238 TDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             ChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence            766665555432    111111122356789999999999999999999999965

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=1.2e-38  Score=320.93  Aligned_cols=251  Identities=25%  Similarity=0.393  Sum_probs=207.2

Q ss_pred             ccCeeecceeccCCceEEEEEEEcc-------CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIE-------TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYE  152 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~-------~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~  152 (586)
                      .++|.+++.||+|+||.||+|.+..       ++..+|+|.+....  .......+.+|+.+++.+.+||||+++++++.
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   94 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACT   94 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence            4689999999999999999997643       23569999987543  22334678889999999978999999999999


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEee
Q 043828          153 DKDAIYLVMELCEGGELFDRIVNKG----------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA  216 (586)
Q Consensus       153 ~~~~~~iv~E~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~  216 (586)
                      ..+.+|+||||+++|+|.+++....                .++...+..++.|++.||.|||++|++||||||+||++ 
T Consensus        95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill-  173 (307)
T cd05098          95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV-  173 (307)
T ss_pred             cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEE-
Confidence            9999999999999999999997542                47888999999999999999999999999999999999 


Q ss_pred             cCCCCCceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHH
Q 043828          217 DGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGI  291 (586)
Q Consensus       217 ~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~  291 (586)
                        +.++.+||+|||.+........   .....+++.|+|||++. ..++.++|||||||++|+|++ |..||......+.
T Consensus       174 --~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~  251 (307)
T cd05098         174 --TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL  251 (307)
T ss_pred             --cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence              5668999999999876542211   11223456899999886 458899999999999999998 8899988777776


Q ss_pred             HHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          292 AHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       292 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ...+..... .  .....++.++.+||.+||..+|.+|||+.+++++
T Consensus       252 ~~~~~~~~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         252 FKLLKEGHR-M--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             HHHHHcCCC-C--CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            666554432 1  1224578999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=1.1e-38  Score=312.17  Aligned_cols=251  Identities=29%  Similarity=0.505  Sum_probs=216.6

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|++.+.||.|+||.||++.+..+++.+|+|.+...... ......+.+|+.+++.+ +||||+++++++.....+|+||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~   78 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS-QKEREDAVNEIRILASV-NHPNIISYKEAFLDGNKLCIVM   78 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc-HHHHHHHHHHHHHHHhC-CCCCchhhhhhhccCCEEEEEe
Confidence            589999999999999999999999999999998765433 23345677899999999 7999999999999999999999


Q ss_pred             eccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          162 ELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       162 E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      ||+++++|.+++..    ...+++..+..++.|++.||.|||+.|++|+||+|+||+++   ..+.+||+|||++.....
T Consensus        79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~---~~~~~kl~d~g~~~~~~~  155 (256)
T cd08530          79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLV---ANDLVKIGDLGISKVLKK  155 (256)
T ss_pred             hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEe---cCCcEEEeeccchhhhcc
Confidence            99999999998866    35689999999999999999999999999999999999994   567899999999987654


Q ss_pred             CCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      . ......|++.|+|||.+.+ .++.++|+||+|+++|+|++|..||...+.......+........   ...++.++++
T Consensus       156 ~-~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  231 (256)
T cd08530         156 N-MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPI---PPIYSQDLQN  231 (256)
T ss_pred             C-CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC---chhhCHHHHH
Confidence            4 3334568899999999864 578899999999999999999999998887777666655443221   1357889999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      +|.+||..+|.+|||+.++++||++
T Consensus       232 li~~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         232 FIRSMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             HHHHHcCCCcccCCCHHHHhcCCCC
Confidence            9999999999999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=8.9e-39  Score=319.14  Aligned_cols=255  Identities=30%  Similarity=0.505  Sum_probs=213.0

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      .|....+||+|+||.||++....+|..+|+|++....   ......+.+|+.+++.+ +||||+++++.+...+..|+||
T Consensus        21 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~   96 (292)
T cd06657          21 YLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVM   96 (292)
T ss_pred             HhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc---hhHHHHHHHHHHHHHhc-CCcchhheeeEEEeCCEEEEEE
Confidence            3444578999999999999999999999999885432   22346788999999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-c
Q 043828          162 ELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-Q  240 (586)
Q Consensus       162 E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-~  240 (586)
                      ||+++++|.+++. ...+++..+..++.|++.||.|||+.|++||||+|+||++   +.++.++|+|||++....... .
T Consensus        97 e~~~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv---~~~~~~~l~dfg~~~~~~~~~~~  172 (292)
T cd06657          97 EFLEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVSKEVPR  172 (292)
T ss_pred             ecCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCCEEEcccccceeccccccc
Confidence            9999999988764 4568999999999999999999999999999999999999   567889999999887654322 2


Q ss_pred             eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHH
Q 043828          241 FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK  319 (586)
Q Consensus       241 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  319 (586)
                      .....|++.|+|||.+. ..++.++|+||+||++|+|++|..||...........+..... ........++..+.++|.
T Consensus       173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~  251 (292)
T cd06657         173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PKLKNLHKVSPSLKGFLD  251 (292)
T ss_pred             ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCC-cccCCcccCCHHHHHHHH
Confidence            23356889999999885 4578899999999999999999999988776655555443322 112223467899999999


Q ss_pred             HccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          320 NMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       320 ~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      +||..+|.+||++.+++.||||....
T Consensus       252 ~~l~~~P~~R~~~~~ll~~~~~~~~~  277 (292)
T cd06657         252 RLLVRDPAQRATAAELLKHPFLAKAG  277 (292)
T ss_pred             HHHhCCcccCcCHHHHhcChHHhccC
Confidence            99999999999999999999998654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=8.4e-39  Score=323.34  Aligned_cols=248  Identities=21%  Similarity=0.288  Sum_probs=204.2

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcE----EEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGET----YACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~----~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      .+|++.+.||+|+||.||+|.+..+|..    ||+|++....  .......+.+|+.+++.+ +||||+++++++... .
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~~~g~~~~~-~   82 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-T   82 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEcCC-C
Confidence            4799999999999999999988766654    8888885432  223346788999999999 999999999998764 5


Q ss_pred             EEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      .++|+||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+   +..+.+||+|||++...
T Consensus        83 ~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill---~~~~~~kl~DfG~a~~~  159 (316)
T cd05108          83 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLV---KTPQHVKITDFGLAKLL  159 (316)
T ss_pred             ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEe---cCCCcEEEccccccccc
Confidence            78999999999999999874 458899999999999999999999999999999999999   56678999999999876


Q ss_pred             CCCCcee---cccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          236 KPGEQFC---EIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       236 ~~~~~~~---~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      .......   ...++..|+|||++. ..++.++|||||||++|+|++ |..||.+.........+.. ...++.+  +.+
T Consensus       160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~--~~~  236 (316)
T cd05108         160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK-GERLPQP--PIC  236 (316)
T ss_pred             cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhC-CCCCCCC--CCC
Confidence            5433221   223466899999986 468999999999999999997 9999988776665444333 3333322  357


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +..+.+++.+||..+|.+|||+.+++.+
T Consensus       237 ~~~~~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         237 TIDVYMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            8899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=5.7e-39  Score=319.32  Aligned_cols=253  Identities=31%  Similarity=0.529  Sum_probs=210.3

Q ss_pred             eeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEe
Q 043828           83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVME  162 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E  162 (586)
                      |++.+.||.|++|.||+|.+..+|+.+++|.+...... ......+.+|+.+++++ +||||+++++++.++..+++|+|
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e   78 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES-EGIPKTALREIKLLKEL-NHPNIIKLLDVFRHKGDLYLVFE   78 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEecccccc-chhHHHHHHHHHHHHHh-cCCCcchHHHhhccCCCEEEEEe
Confidence            67788999999999999999889999999998765433 22346788899999999 79999999999999999999999


Q ss_pred             ccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-c
Q 043828          163 LCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-Q  240 (586)
Q Consensus       163 ~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-~  240 (586)
                      |+++ +|.+.+.. ...+++..+..++.|++.||.|||+.+|+|+||+|+||++   +.++.++|+|||.+....... .
T Consensus        79 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili---~~~~~~~l~df~~~~~~~~~~~~  154 (283)
T cd05118          79 FMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLI---NTEGVLKLADFGLARSFGSPVRP  154 (283)
T ss_pred             ccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEE---CCCCcEEEeeeeeeEecCCCccc
Confidence            9975 88887766 4578999999999999999999999999999999999999   567889999999987765433 2


Q ss_pred             eecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccC-----------------
Q 043828          241 FCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID-----------------  301 (586)
Q Consensus       241 ~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~-----------------  301 (586)
                      .....++..|+|||.+.+  .++.++||||||+++|+|++|..||...+..+....+......                 
T Consensus       155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (283)
T cd05118         155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYK  234 (283)
T ss_pred             ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhh
Confidence            334568889999999853  5788999999999999999999999877765544443321110                 


Q ss_pred             --CCC-------CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          302 --FER-------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       302 --~~~-------~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                        ++.       ..++.++..++++|.+||.+||.+||++.+++.||||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         235 FSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             hhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence              100       1123467899999999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-41  Score=304.74  Aligned_cols=259  Identities=21%  Similarity=0.303  Sum_probs=213.8

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++.+-++.||.|+||+|++-.++.+|+..|||+|+....  +.+..++..|.+...+-.++||||++|+..-.++..||.
T Consensus        64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiC  141 (361)
T KOG1006|consen   64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWIC  141 (361)
T ss_pred             chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeee
Confidence            456667889999999999999999999999999987664  334578889999888888999999999999999999999


Q ss_pred             EeccCCCChHHHHH-----hCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          161 MELCEGGELFDRIV-----NKGHYTERAAAAVGKTILRIVKVCHE-NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       161 ~E~~~gg~L~~~l~-----~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      ||+|+ .+|..+..     .+..++|..+..|.-..+.||.||-. ..|||||+||+|||+   +..|.|||||||++-.
T Consensus       142 MELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl---dr~G~vKLCDFGIcGq  217 (361)
T KOG1006|consen  142 MELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL---DRHGDVKLCDFGICGQ  217 (361)
T ss_pred             HHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE---ecCCCEeeecccchHh
Confidence            99995 45533322     35679999999999999999999985 589999999999999   7889999999999987


Q ss_pred             cCCCCceecccCCccccchhhhh---ccCCCcchHHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHhCccCCCCC--CCC
Q 043828          235 FKPGEQFCEIVGSPYYMAPEVLR---RNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAIIRGKIDFERD--PWP  308 (586)
Q Consensus       235 ~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~~~~~~~--~~~  308 (586)
                      +..+-..+.-.|...|||||-+.   ..|+-++||||||++|||+.||..|+..-+. -+.+..+..+..+.-..  ..-
T Consensus       218 Lv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~  297 (361)
T KOG1006|consen  218 LVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECV  297 (361)
T ss_pred             HHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCccccc
Confidence            65544445567889999999985   3599999999999999999999999976433 34444455554432211  123


Q ss_pred             CCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          309 KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      +++..++.+|..||.+|-+.||..++++++||++.+.
T Consensus       298 ~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~  334 (361)
T KOG1006|consen  298 HYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYA  334 (361)
T ss_pred             ccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhh
Confidence            4789999999999999999999999999999998754

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=1.7e-38  Score=312.98  Aligned_cols=249  Identities=23%  Similarity=0.354  Sum_probs=208.5

Q ss_pred             cCeeecceeccCCceEEEEEEEccC---CcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIET---GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ++|++.+.||+|+||+||+|.+..+   ...+|+|++....  .......+.+|+.+++.+ +||||+++++++...+.+
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   80 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQF-DHPNIIRLEGVVTKSRPV   80 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhC-CCCCcceEeEEEecCCce
Confidence            5799999999999999999987654   4578999886543  222345688899999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      ++||||+++++|.+++... +.+++..+..++.|++.||.|||+++|+||||||+||++   +.++.++|+|||++....
T Consensus        81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili---~~~~~~~l~dfg~~~~~~  157 (266)
T cd05033          81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRRLE  157 (266)
T ss_pred             EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCCEEECccchhhccc
Confidence            9999999999999998763 468999999999999999999999999999999999999   567889999999998764


Q ss_pred             CC-Ccee--cccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCC
Q 043828          237 PG-EQFC--EIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS  311 (586)
Q Consensus       237 ~~-~~~~--~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  311 (586)
                      .. ....  ...+++.|+|||.+. ..++.++||||||+++|+|++ |..||...........+..... .+  ....++
T Consensus       158 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~--~~~~~~  234 (266)
T cd05033         158 DSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYR-LP--PPMDCP  234 (266)
T ss_pred             ccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC-CC--CCCCCC
Confidence            21 1111  223467899999986 468899999999999999998 9999988887777776655422 11  123578


Q ss_pred             HHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          312 KEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       312 ~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ..+.+|+.+||+.+|++||++.+++++
T Consensus       235 ~~l~~li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         235 SALYQLMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=1.6e-38  Score=311.50  Aligned_cols=241  Identities=26%  Similarity=0.352  Sum_probs=201.2

Q ss_pred             eeccCCceEEEEEEE--ccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccC
Q 043828           88 ELGRGEFGITHQCFE--IETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCE  165 (586)
Q Consensus        88 ~lG~G~~g~V~~~~~--~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~  165 (586)
                      .||+|+||.||+|..  ..++..+|+|++..... .....+.+.+|+.+++.+ +||||+++++++.. ..+++||||++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~~~lv~e~~~   78 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNN-DPALKDELLREANVMQQL-DNPYIVRMIGICEA-ESWMLVMELAE   78 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCC-cHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcC-CCcEEEEecCC
Confidence            689999999999964  45678999998864432 233456788999999999 89999999998764 56789999999


Q ss_pred             CCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCce----
Q 043828          166 GGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF----  241 (586)
Q Consensus       166 gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~----  241 (586)
                      +++|.+++.....+++..+..++.|++.||.|||++||+||||||.||++   +.++.+||+|||++.........    
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill---~~~~~~kl~Dfg~~~~~~~~~~~~~~~  155 (257)
T cd05116          79 LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLL---VTQHYAKISDFGLSKALGADENYYKAK  155 (257)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEE---cCCCeEEECCCccccccCCCCCeeeec
Confidence            99999999887889999999999999999999999999999999999999   56778999999999765433221    


Q ss_pred             ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHH
Q 043828          242 CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK  319 (586)
Q Consensus       242 ~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  319 (586)
                      ....+++.|+|||.+. ..++.++|||||||++|+|++ |..||.......+...+..+.. .+  ....+++.+.++|.
T Consensus       156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~-~~--~~~~~~~~l~~li~  232 (257)
T cd05116         156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER-ME--CPQRCPPEMYDLMK  232 (257)
T ss_pred             CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC-CC--CCCCCCHHHHHHHH
Confidence            1223457899999886 457889999999999999998 9999988887777777765542 11  22458899999999


Q ss_pred             HccCCCCCCCCCHHHHhc
Q 043828          320 NMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       320 ~~L~~dp~~Rps~~eil~  337 (586)
                      +||+.||++||++.+|..
T Consensus       233 ~~~~~~p~~Rp~~~~i~~  250 (257)
T cd05116         233 LCWTYGVDERPGFAVVEL  250 (257)
T ss_pred             HHhccCchhCcCHHHHHH
Confidence            999999999999999865

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=8.4e-39  Score=327.07  Aligned_cols=259  Identities=26%  Similarity=0.456  Sum_probs=209.2

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC---
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK---  154 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~---  154 (586)
                      .+.++|.+.+.||+|+||.||+|.+..+|+.||+|++.+... .....+.+.+|+.+++++ +||||+++++++...   
T Consensus        14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l-~h~~iv~~~~~~~~~~~~   91 (345)
T cd07877          14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSL   91 (345)
T ss_pred             hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHc-CCCcccceeeeeeecccc
Confidence            345789999999999999999999999999999999865422 222345678899999999 899999999988643   


Q ss_pred             ---CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          155 ---DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       155 ---~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                         ..+|++++++ |++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+||++   +.++.+||+|||+
T Consensus        92 ~~~~~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll---~~~~~~kl~dfg~  166 (345)
T cd07877          92 EEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGL  166 (345)
T ss_pred             cccccEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEE---cCCCCEEEecccc
Confidence               3478888887 7799877654 469999999999999999999999999999999999999   5678899999999


Q ss_pred             ccccCCCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc---------
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI---------  300 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~---------  300 (586)
                      +.....  ......|++.|+|||.+.+  .++.++||||+||++|+|++|.+||...........+.....         
T Consensus       167 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (345)
T cd07877         167 ARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK  244 (345)
T ss_pred             cccccc--cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence            876432  2334578899999998854  578899999999999999999999987665544433322111         


Q ss_pred             --------------CCCC----CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          301 --------------DFER----DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       301 --------------~~~~----~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                                    ..+.    ..+...++.+.+||.+||+.||.+|||+.+++.||||+...
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~  307 (345)
T cd07877         245 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  307 (345)
T ss_pred             cccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcC
Confidence                          0000    01124578899999999999999999999999999998643

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=4.8e-39  Score=328.19  Aligned_cols=261  Identities=33%  Similarity=0.490  Sum_probs=211.6

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC--C
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK--D  155 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~--~  155 (586)
                      .+.++|++.+.||+|+||.||+|.+..+|+.+|+|++..... .......+.+|+.+++++.+||||+++++++...  .
T Consensus         4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~   82 (337)
T cd07852           4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR-NATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDK   82 (337)
T ss_pred             hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC-cchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCc
Confidence            456789999999999999999999988999999999865322 1222355778999999997899999999998643  4


Q ss_pred             eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      .+|+||||++ ++|..++... .+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++...
T Consensus        83 ~~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill---~~~~~~kl~d~g~~~~~  157 (337)
T cd07852          83 DIYLVFEYME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILL---NSDCRVKLADFGLARSL  157 (337)
T ss_pred             eEEEEecccc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCcEEEeeccchhcc
Confidence            6899999997 5998888765 78899999999999999999999999999999999999   67789999999998765


Q ss_pred             CCCC------ceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc-------
Q 043828          236 KPGE------QFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI-------  300 (586)
Q Consensus       236 ~~~~------~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~-------  300 (586)
                      ....      ......|++.|+|||++.  ..++.++|||||||++|+|++|.+||.+.........+.....       
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  237 (337)
T cd07852         158 SELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDI  237 (337)
T ss_pred             ccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence            4322      223456899999999874  3578899999999999999999999987655443333222110       


Q ss_pred             --------------------CCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          301 --------------------DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       301 --------------------~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                          .......+.++..+.+||.+||+.||++|||+.++++||||+..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~  301 (337)
T cd07852         238 ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF  301 (337)
T ss_pred             HHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence                                00111234478899999999999999999999999999999764

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=1.7e-38  Score=318.73  Aligned_cols=251  Identities=23%  Similarity=0.353  Sum_probs=205.7

Q ss_pred             ccCeeecceeccCCceEEEEEEEc-----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEI-----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      .++|.+.+.||+|+||.||+|.+.     .++..+|+|.+.....  ....+.+.+|+.+++++.+||||+++++++...
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  111 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH--SSEREALMSELKIMSHLGNHENIVNLLGACTIG  111 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC--hHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence            458999999999999999999752     3456799998865432  223467889999999997799999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          155 DAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                      +.+|+||||+++|+|.+++....  .+++..+..++.|++.||.|||+++|+|+||||+||++   +..+.++|+|||++
T Consensus       112 ~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~~l~dfg~~  188 (302)
T cd05055         112 GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLL---THGKIVKICDFGLA  188 (302)
T ss_pred             CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEE---cCCCeEEECCCccc
Confidence            99999999999999999987643  38999999999999999999999999999999999999   56778999999998


Q ss_pred             cccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCC
Q 043828          233 IFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPW  307 (586)
Q Consensus       233 ~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  307 (586)
                      ........   .....+++.|+|||.+. ..++.++||||+||++|+|++ |..||....................  ..
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~--~~  266 (302)
T cd05055         189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMA--QP  266 (302)
T ss_pred             ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCC--CC
Confidence            76543221   11234577899999885 468899999999999999998 9999987765554444443332222  22


Q ss_pred             CCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       308 ~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ...+..+.+|+.+||.++|++|||+.+++.
T Consensus       267 ~~~~~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         267 EHAPAEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             CCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            356889999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=6.6e-39  Score=318.94  Aligned_cols=253  Identities=32%  Similarity=0.500  Sum_probs=208.8

Q ss_pred             eeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEe
Q 043828           83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVME  162 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E  162 (586)
                      |++.+.||.|++|+||+|....+++.+++|++......  .......+|+..++++.+||||+++++++.+++..|+|||
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   78 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE   78 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence            68899999999999999999888999999998654322  1223456799999999449999999999999999999999


Q ss_pred             ccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCc
Q 043828          163 LCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ  240 (586)
Q Consensus       163 ~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~  240 (586)
                      |+ +|+|.+++....  .+++..+..++.|++.+|.|||++|++|+||+|+||++   +..+.++|+|||++........
T Consensus        79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i---~~~~~~~l~d~~~~~~~~~~~~  154 (283)
T cd07830          79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLV---SGPEVVKIADFGLAREIRSRPP  154 (283)
T ss_pred             cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---cCCCCEEEeecccceeccCCCC
Confidence            99 789998887754  78999999999999999999999999999999999999   5678999999999987655444


Q ss_pred             eecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCC--------------
Q 043828          241 FCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER--------------  304 (586)
Q Consensus       241 ~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~--------------  304 (586)
                      .....++..|+|||++.  ..++.++|+||||+++|+|++|.+||...+.......+.........              
T Consensus       155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (283)
T cd07830         155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLG  234 (283)
T ss_pred             cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccc
Confidence            45567899999999884  34788999999999999999999999877655544433221110000              


Q ss_pred             ------------CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          305 ------------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       305 ------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                                  ...+..+..+.+||.+||+.+|.+|||+.|++.||||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         235 FRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             ccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence                        0112346789999999999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.8e-38  Score=310.92  Aligned_cols=246  Identities=24%  Similarity=0.388  Sum_probs=205.2

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      .+|++.+.||+|+||.||+|.+. ++..+|+|++.....    ..+.+.+|+.+++.+ +||||+++++++...+..|+|
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv   77 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM----SEDDFIEEAKVMMKL-SHPNLVQLYGVCTKQRPIFIV   77 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC----CHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCceEEE
Confidence            36899999999999999999875 466899998864332    235678899999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||++|++|.+++..+ ..+++..+..++.|++.||.|||+.||+||||||+||++   +.++.+||+|||++.......
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i---~~~~~~kl~dfg~~~~~~~~~  154 (256)
T cd05059          78 TEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLV---GEDNVVKVSDFGLARYVLDDQ  154 (256)
T ss_pred             EecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEE---CCCCcEEECCcccceeccccc
Confidence            9999999999998763 468999999999999999999999999999999999999   567889999999987654322


Q ss_pred             cee--cccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          240 QFC--EIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       240 ~~~--~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      ...  ...++..|+|||.+. ..++.++|||||||++|+|++ |..||...+..+....+..... ...  ...++..+.
T Consensus       155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~  231 (256)
T cd05059         155 YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR-LYR--PKLAPTEVY  231 (256)
T ss_pred             ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCc-CCC--CCCCCHHHH
Confidence            111  122345799999986 568899999999999999998 8999988777777666654422 221  235789999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcC
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +++.+||..+|++|||+.++++.
T Consensus       232 ~li~~cl~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         232 TIMYSCWHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             HHHHHHhcCChhhCcCHHHHHHH
Confidence            99999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=1e-38  Score=317.57  Aligned_cols=249  Identities=17%  Similarity=0.290  Sum_probs=208.4

Q ss_pred             cCeeecceeccCCceEEEEEEEcc-----CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIE-----TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      .+|++.+.||.|+||.||+|.+..     .+..||+|++....  .....+.+.+|+.++..+ +||||+++++++....
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~   81 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRL-QHPNIVCLLGVVTKEQ   81 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEcCCC
Confidence            468899999999999999998754     35789999987543  222346688999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCC
Q 043828          156 AIYLVMELCEGGELFDRIVNK----------------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS  219 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~  219 (586)
                      ..++++||+++++|.+++...                ..+++..+..++.|++.||.|||++||+||||||+||++   .
T Consensus        82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~---~  158 (283)
T cd05091          82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLV---F  158 (283)
T ss_pred             ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEe---c
Confidence            999999999999999988532                347888899999999999999999999999999999999   4


Q ss_pred             CCCceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHH
Q 043828          220 ENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHA  294 (586)
Q Consensus       220 ~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~  294 (586)
                      .++.+||+|||++........   .....+++.|+|||.+. +.++.++|||||||++|+|++ |..||.+....+....
T Consensus       159 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~  238 (283)
T cd05091         159 DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEM  238 (283)
T ss_pred             CCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence            567899999999876543221   12345678999999985 568899999999999999998 8899988888888887


Q ss_pred             HHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          295 IIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       295 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +........   ...++..+.+|+.+||+.+|.+||++.+++..
T Consensus       239 i~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         239 IRNRQVLPC---PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             HHcCCcCCC---CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            777654321   23578999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.2e-38  Score=325.79  Aligned_cols=258  Identities=29%  Similarity=0.498  Sum_probs=209.0

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC---
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK---  154 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~---  154 (586)
                      .+..+|.+.+.||+|+||.||+|++..+|+.||+|++.+... .......+.+|+.+++.+ +||||+++++++...   
T Consensus        12 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~   89 (342)
T cd07879          12 ELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHM-QHENVIGLLDVFTSAVSG   89 (342)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhc-CCCCccchhheecccccC
Confidence            345789999999999999999999999999999999875432 222335678899999999 899999999998754   


Q ss_pred             ---CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          155 ---DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       155 ---~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                         ..+|+|+||+.. +|..++  ...+++..+..++.|++.||.|||+.+|+||||||+||++   +.++.+||+|||+
T Consensus        90 ~~~~~~~lv~e~~~~-~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll---~~~~~~kL~dfg~  163 (342)
T cd07879          90 DEFQDFYLVMPYMQT-DLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAV---NEDCELKILDFGL  163 (342)
T ss_pred             CCCceEEEEeccccc-CHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEeeCCC
Confidence               357999999964 676554  3468999999999999999999999999999999999999   5678999999999


Q ss_pred             ccccCCCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCc----------
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK----------  299 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~----------  299 (586)
                      +.....  ......+++.|+|||++.+  .++.++|||||||++|+|++|+.||.+.+.......+....          
T Consensus       164 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (342)
T cd07879         164 ARHADA--EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQK  241 (342)
T ss_pred             CcCCCC--CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence            876432  2234567889999999854  47889999999999999999999998877555444433211          


Q ss_pred             -------------cCCCCC----CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          300 -------------IDFERD----PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       300 -------------~~~~~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                                   ...+..    .++..+..+.+||.+||+.||.+||++.+++.||||+...
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~  304 (342)
T cd07879         242 LEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR  304 (342)
T ss_pred             hcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence                         001111    1245778899999999999999999999999999998653

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.2e-38  Score=314.09  Aligned_cols=249  Identities=22%  Similarity=0.298  Sum_probs=207.1

Q ss_pred             ccCeeecceeccCCceEEEEEEEccC-----CcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIET-----GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~-----~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      .++|++.+.||+|+||.||+|.....     +..+|+|.+....  .......+.+|+.+++.+ +||||+++++++...
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~   81 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEF-NCHHVVRLLGVVSTG   81 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhC-CCCceeEEEEEEcCC
Confidence            46899999999999999999987643     3789999975442  122335678899999999 899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCce
Q 043828          155 DAIYLVMELCEGGELFDRIVNK----------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQL  224 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~v  224 (586)
                      ...|+||||+++++|.+++...          ..+++..+..++.|++.||.|||+.+|+||||||+||++   +.++.+
T Consensus        82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill---~~~~~~  158 (277)
T cd05032          82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMV---AEDLTV  158 (277)
T ss_pred             CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEE---cCCCCE
Confidence            9999999999999999998653          236788899999999999999999999999999999999   567899


Q ss_pred             EEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCc
Q 043828          225 KAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGK  299 (586)
Q Consensus       225 kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~  299 (586)
                      ||+|||++........   .....++..|+|||.+. +.++.++|||||||++|+|++ |..||...+.......+..+.
T Consensus       159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~  238 (277)
T cd05032         159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGG  238 (277)
T ss_pred             EECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCC
Confidence            9999999876543321   22345678899999986 468899999999999999998 999998888877777666433


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          300 IDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       300 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .. ..  ...++..+.++|.+||+.+|++|||+.+++.
T Consensus       239 ~~-~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         239 HL-DL--PENCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             CC-CC--CCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            21 11  1346899999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1.4e-38  Score=318.25  Aligned_cols=251  Identities=26%  Similarity=0.417  Sum_probs=208.6

Q ss_pred             ccCeeecceeccCCceEEEEEEEccC-----CcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIET-----GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~-----~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      .++|++.+.||+|+||.||++.....     ...+|+|.+.....  ......+.+|+.+++++.+||||+++++++..+
T Consensus        11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   88 (293)
T cd05053          11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE   88 (293)
T ss_pred             HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC--HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence            36899999999999999999987643     36799998865432  223456889999999997799999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecC
Q 043828          155 DAIYLVMELCEGGELFDRIVNK----------------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADG  218 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~  218 (586)
                      +.+|+||||+++|+|..++...                ..+++..+..++.|++.||.|||+++|+||||||+||++   
T Consensus        89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~---  165 (293)
T cd05053          89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV---  165 (293)
T ss_pred             CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE---
Confidence            9999999999999999998642                458899999999999999999999999999999999999   


Q ss_pred             CCCCceEEeecccccccCCCCce---ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHH
Q 043828          219 SENSQLKAIDFGLSIFFKPGEQF---CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAH  293 (586)
Q Consensus       219 ~~~~~vkl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~  293 (586)
                      +.++.+||+|||++.........   ....++..|+|||++. ..++.++|||||||++|+|++ |..||......+...
T Consensus       166 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~  245 (293)
T cd05053         166 TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK  245 (293)
T ss_pred             cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHH
Confidence            56789999999999876443221   1223456799999875 468899999999999999997 999998888777776


Q ss_pred             HHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          294 AIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       294 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .+..... ..  .....+..+.+|+.+||..||.+|||+.+++++
T Consensus       246 ~~~~~~~-~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         246 LLKEGYR-ME--KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             HHHcCCc-CC--CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            6655432 11  123578899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.2e-38  Score=313.35  Aligned_cols=248  Identities=21%  Similarity=0.290  Sum_probs=204.2

Q ss_pred             eeecceeccCCceEEEEEEEccC---CcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe---
Q 043828           83 YTFGKELGRGEFGITHQCFEIET---GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA---  156 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~---  156 (586)
                      |++++.||+|+||.||+|....+   +..+|+|++...... ......+.+|+.+++.+ +||||+++++++.....   
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~   78 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT-YSEIEEFLSEAACMKDF-DHPNVMKLIGVCFEASSLQK   78 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCC-HHHHHHHHHHHHHHHhC-CCCCeeeEEeeeccCCcccc
Confidence            67889999999999999987543   478999998754322 33456789999999999 89999999998765443   


Q ss_pred             ---EEEEEeccCCCChHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEe
Q 043828          157 ---IYLVMELCEGGELFDRIVNK------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI  227 (586)
Q Consensus       157 ---~~iv~E~~~gg~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~  227 (586)
                         .++||||+++|+|..++...      ..+++..+..++.|++.||.|||+.+|+||||||+||++   +.++.+||+
T Consensus        79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~  155 (273)
T cd05035          79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCML---REDMTVCVA  155 (273)
T ss_pred             CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEE---CCCCeEEEC
Confidence               79999999999998887532      358999999999999999999999999999999999999   567899999


Q ss_pred             ecccccccCCCCce---ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCC
Q 043828          228 DFGLSIFFKPGEQF---CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDF  302 (586)
Q Consensus       228 Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~  302 (586)
                      |||++.........   ....++..|+|||.+. ..++.++|||||||++|+|++ |.+||.+....+....+..+....
T Consensus       156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~  235 (273)
T cd05035         156 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLK  235 (273)
T ss_pred             CccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            99999865433211   1223467899999986 468899999999999999999 999998888777777666543221


Q ss_pred             CCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          303 ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       303 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                         ....++..+.+++.+||+.||.+|||+.+++++
T Consensus       236 ---~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         236 ---QPEDCLDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             ---CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence               123578999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=1.7e-38  Score=317.39  Aligned_cols=247  Identities=23%  Similarity=0.357  Sum_probs=206.6

Q ss_pred             cCeeecceeccCCceEEEEEEEc-----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           81 DKYTFGKELGRGEFGITHQCFEI-----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      .+|.+.+.||+|+||.||+|.+.     .++..+++|.+....   ......+.+|+.+++++ +||||+++++++....
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~   80 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT---LAARKDFQREAELLTNL-QHEHIVKFYGVCGDGD   80 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc---HHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCC
Confidence            47999999999999999999753     345568888875432   22345788999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCC
Q 043828          156 AIYLVMELCEGGELFDRIVNKG----------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS  219 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~  219 (586)
                      ..++||||+++++|.+++....                .+++..+..++.||+.||.|||++||+||||||+||++   +
T Consensus        81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~---~  157 (291)
T cd05094          81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLV---G  157 (291)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE---c
Confidence            9999999999999999987542                37899999999999999999999999999999999999   5


Q ss_pred             CCCceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHH
Q 043828          220 ENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHA  294 (586)
Q Consensus       220 ~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~  294 (586)
                      .++.++|+|||++........   .....+++.|+|||.+. ..++.++|||||||++|+|++ |..||...+.......
T Consensus       158 ~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~  237 (291)
T cd05094         158 ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIEC  237 (291)
T ss_pred             cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            678999999999876543221   12345678899999886 468889999999999999998 9999988888777776


Q ss_pred             HHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          295 IIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       295 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +..+.....   ....+..+.+++.+||+.+|.+|||+.++++
T Consensus       238 ~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         238 ITQGRVLER---PRVCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             HhCCCCCCC---CccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            665544322   2346889999999999999999999999976

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=2.8e-38  Score=312.23  Aligned_cols=243  Identities=25%  Similarity=0.362  Sum_probs=197.9

Q ss_pred             ceeccCCceEEEEEEEccCCcE--EEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEecc
Q 043828           87 KELGRGEFGITHQCFEIETGET--YACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELC  164 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~--~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~  164 (586)
                      +.||+|+||.||+|....++..  +++|.+....  .......+.+|+.++.++.+||||+++++++...+.+|+||||+
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~   78 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA   78 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC--CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence            3689999999999998887764  5777765322  22334678899999999988999999999999999999999999


Q ss_pred             CCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEee
Q 043828          165 EGGELFDRIVNKG----------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID  228 (586)
Q Consensus       165 ~gg~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~D  228 (586)
                      ++|+|.+++....                .+++..+..++.|++.||.|||++|++||||||+||++   +.++.+||+|
T Consensus        79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili---~~~~~~kl~d  155 (270)
T cd05047          79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIAD  155 (270)
T ss_pred             CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEE---cCCCeEEECC
Confidence            9999999987543                47889999999999999999999999999999999999   5678999999


Q ss_pred             cccccccCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCC
Q 043828          229 FGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDP  306 (586)
Q Consensus       229 fg~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~  306 (586)
                      ||++..............++.|+|||++. ..++.++|||||||++|+|++ |..||.+.+.......+.... ..  ..
T Consensus       156 fgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-~~--~~  232 (270)
T cd05047         156 FGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-RL--EK  232 (270)
T ss_pred             CCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC-CC--CC
Confidence            99986432111111123356799999985 468889999999999999997 999998877777666654432 11  12


Q ss_pred             CCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       307 ~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ...++..+.+|+.+||..+|.+|||+.+++.
T Consensus       233 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         233 PLNCDDEVYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             CCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence            2357889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=1.2e-38  Score=312.64  Aligned_cols=245  Identities=28%  Similarity=0.467  Sum_probs=200.8

Q ss_pred             eecceeccCCceEEEEEEEc----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           84 TFGKELGRGEFGITHQCFEI----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        84 ~~~~~lG~G~~g~V~~~~~~----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      ++.+.||.|+||.||+|...    ..+..|+||.+...  ......+.+.+|+.+++++ +||||+++++++...+.+++
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~l   78 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLFL   78 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeecccccccc-cccccccccccccccccccc
Confidence            46788999999999999887    34678999998442  2333467899999999999 99999999999998888999


Q ss_pred             EEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          160 VMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |||||++|+|.+++...  ..+++..+..++.||+.||.|||+++++|++|+++||++   +.++.+||+|||++.....
T Consensus        79 v~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill---~~~~~~Kl~~f~~~~~~~~  155 (259)
T PF07714_consen   79 VMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILL---DSNGQVKLSDFGLSRPISE  155 (259)
T ss_dssp             EEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE---ETTTEEEEESTTTGEETTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccc
Confidence            99999999999999886  679999999999999999999999999999999999999   5678999999999987632


Q ss_pred             CCce---ecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCH
Q 043828          238 GEQF---CEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       238 ~~~~---~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      ....   ....+...|+|||.+.. .++.++||||||+++|||++ |..||...+...+...+..+.... .  ...++.
T Consensus       156 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~-~--~~~~~~  232 (259)
T PF07714_consen  156 KSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLP-I--PDNCPK  232 (259)
T ss_dssp             SSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETT-S--BTTSBH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccce-e--ccchhH
Confidence            2221   22346778999999864 58999999999999999999 789999988888888886554422 1  235789


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .+.++|.+||..||.+|||+.++++
T Consensus       233 ~~~~li~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  233 DIYSLIQQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             HHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHh
Confidence            9999999999999999999999975

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=3.7e-38  Score=318.38  Aligned_cols=250  Identities=24%  Similarity=0.376  Sum_probs=206.1

Q ss_pred             ccCeeecceeccCCceEEEEEEEcc-------CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIE-------TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYE  152 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~-------~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~  152 (586)
                      .++|.+++.||+|+||.||+|.+..       ....+|+|.+....  .......+.+|+.+++.+.+||||+++++++.
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~   88 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGVCT   88 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence            3689999999999999999997632       34568999876432  22335678899999999967999999999999


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEee
Q 043828          153 DKDAIYLVMELCEGGELFDRIVNK----------------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA  216 (586)
Q Consensus       153 ~~~~~~iv~E~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~  216 (586)
                      ..+.+|+||||+++|+|.+++...                ..++...+..++.||+.||.|||++||+||||||+||++ 
T Consensus        89 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill-  167 (314)
T cd05099          89 QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLV-  167 (314)
T ss_pred             cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEE-
Confidence            999999999999999999998653                247888999999999999999999999999999999999 


Q ss_pred             cCCCCCceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHH
Q 043828          217 DGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGI  291 (586)
Q Consensus       217 ~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~  291 (586)
                        +.++.+||+|||++........   .....+++.|+|||++. +.++.++|||||||++|+|++ |..||...+....
T Consensus       168 --~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~  245 (314)
T cd05099         168 --TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEEL  245 (314)
T ss_pred             --cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence              5677899999999976543211   11223456799999986 468899999999999999999 8999988887777


Q ss_pred             HHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          292 AHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       292 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ...+......   .....++..++++|.+||..+|.+|||+.++++
T Consensus       246 ~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         246 FKLLREGHRM---DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             HHHHHcCCCC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            7766654321   112457889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=1.3e-38  Score=312.85  Aligned_cols=246  Identities=21%  Similarity=0.362  Sum_probs=209.1

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      .+|++++.||.|+||.||+|.+.. +..+|+|++.....   .....+.+|+.+++.+ +||||+++++++.....+++|
T Consensus         6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv   80 (261)
T cd05148           6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDL---LKQQDFQKEVQALKRL-RHKHLISLFAVCSVGEPVYII   80 (261)
T ss_pred             HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccch---hhHHHHHHHHHHHhcC-CCcchhheeeeEecCCCeEEE
Confidence            579999999999999999999877 88999999865532   2346788999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          161 MELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      |||+++++|.+++...  ..+++..+..++.||+.||.|||++||+||||+|+||++   +.++.+||+|||.+......
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv---~~~~~~kl~d~g~~~~~~~~  157 (261)
T cd05148          81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILV---GEDLVCKVADFGLARLIKED  157 (261)
T ss_pred             EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEE---cCCceEEEccccchhhcCCc
Confidence            9999999999998753  458999999999999999999999999999999999999   56788999999998765432


Q ss_pred             Cc-eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          239 EQ-FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       239 ~~-~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      .. .....++..|+|||.+. +.++.++|||||||++|+|++ |..||...+..+....+.... ..  +....++..+.
T Consensus       158 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~  234 (261)
T cd05148         158 VYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGY-RM--PCPAKCPQEIY  234 (261)
T ss_pred             cccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCC-cC--CCCCCCCHHHH
Confidence            21 12334567899999986 468889999999999999998 899998888777777766432 22  22246789999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhc
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ++|.+||+.||.+|||+.++++
T Consensus       235 ~~i~~~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         235 KIMLECWAAEPEDRPSFKALRE  256 (261)
T ss_pred             HHHHHHcCCCchhCcCHHHHHH
Confidence            9999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=3.6e-38  Score=319.94  Aligned_cols=257  Identities=31%  Similarity=0.498  Sum_probs=208.6

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe-CCeE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED-KDAI  157 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~-~~~~  157 (586)
                      +.++|++.+.||.|+||.||+|.+..+|+.||+|++.+.... ......+.+|+.+++.+ +||||++++++|.. ...+
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~   85 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST-PVLAKRTYRELKLLKHL-RHENIISLSDIFISPLEDI   85 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccc-cchhHHHHHHHHHHHhc-CCCCeeeEeeeEecCCCcE
Confidence            457899999999999999999999999999999998654322 22346778899999999 89999999999875 5678


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |+|+||+ +++|..++.. ..+++..+..++.|++.||.|||+.+|+||||+|+||++   +.++.++|+|||.+.....
T Consensus        86 ~lv~e~~-~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili---~~~~~~~l~dfg~~~~~~~  160 (328)
T cd07856          86 YFVTELL-GTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILI---NENCDLKICDFGLARIQDP  160 (328)
T ss_pred             EEEeehh-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeE---CCCCCEEeCccccccccCC
Confidence            9999999 5688777654 468889999999999999999999999999999999999   5678999999999875432


Q ss_pred             CCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhC-----------------
Q 043828          238 GEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRG-----------------  298 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~-----------------  298 (586)
                        ......+++.|+|||.+.+  .++.++|||||||++|+|++|.+||...........+...                 
T Consensus       161 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (328)
T cd07856         161 --QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENT  238 (328)
T ss_pred             --CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhh
Confidence              2234567889999998753  5889999999999999999999999776653322221110                 


Q ss_pred             -------cc--CCC-CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          299 -------KI--DFE-RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       299 -------~~--~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                             ..  ..+ ....+.++..+.++|.+||+.+|++|||+.+++.||||...
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~  294 (328)
T cd07856         239 LRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPY  294 (328)
T ss_pred             HHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccc
Confidence                   00  000 01124578899999999999999999999999999999754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=3.3e-38  Score=311.12  Aligned_cols=248  Identities=24%  Similarity=0.369  Sum_probs=207.3

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCc---EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGE---TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .+|++.+.||+|+||.||+|.+..++.   .+|+|.+....  .......+.+|+.+++++ +||||+++++++...+.+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   80 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSKPV   80 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCcc
Confidence            579999999999999999998865544   68999886543  223356789999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      |+||||+++++|.+++... ..++...+..++.|++.||.|||+++++||||||+||++   +.++.++|+|||++....
T Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili---~~~~~~~l~dfg~~~~~~  157 (267)
T cd05066          81 MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILV---NSNLVCKVSDFGLSRVLE  157 (267)
T ss_pred             EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEE---CCCCeEEeCCCCcccccc
Confidence            9999999999999998764 468999999999999999999999999999999999999   567899999999998764


Q ss_pred             CCCce----ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          237 PGEQF----CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       237 ~~~~~----~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      .....    ....++..|+|||.+. +.++.++|||||||++|++++ |..||......+....+..+. ..+  ....+
T Consensus       158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-~~~--~~~~~  234 (267)
T cd05066         158 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY-RLP--APMDC  234 (267)
T ss_pred             cccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC-cCC--CCCCC
Confidence            33211    1122356899999986 468999999999999999886 999998887777766666542 222  22457


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ++.+.+++.+||+++|.+||++.++++
T Consensus       235 ~~~~~~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         235 PAALHQLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             CHHHHHHHHHHcccCchhCCCHHHHHH
Confidence            889999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=4.3e-38  Score=312.44  Aligned_cols=247  Identities=21%  Similarity=0.267  Sum_probs=203.9

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCc----EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGE----TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~----~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      .+|++.+.||+|+||+||+|.+..+|.    .||+|++....  .......+.+|+.++..+ +||||+++++++.. ..
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~-~~   82 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGV-GSPYVCRLLGICLT-ST   82 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhc-CCCCCceEEEEEcC-CC
Confidence            579999999999999999999877776    47899886543  222346788899999999 89999999999875 45


Q ss_pred             EEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      .++++||+++|+|.+++.. ...+++..+..++.|++.||.|||+++|+||||||+||++   ...+.+||+|||++...
T Consensus        83 ~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~---~~~~~~kL~dfG~~~~~  159 (279)
T cd05109          83 VQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLV---KSPNHVKITDFGLARLL  159 (279)
T ss_pred             cEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE---cCCCcEEECCCCceeec
Confidence            7899999999999999876 4568999999999999999999999999999999999999   45678999999999876


Q ss_pred             CCCCce---ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          236 KPGEQF---CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       236 ~~~~~~---~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      ......   ....+++.|+|||.+. ..++.++|||||||++|+|++ |..||...........+..+... +  ..+.+
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~  236 (279)
T cd05109         160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERL-P--QPPIC  236 (279)
T ss_pred             ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcC-C--CCccC
Confidence            433221   1223467899999985 468899999999999999998 99999877766666555544322 2  22457


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +..+.++|.+||..||++||++.++++
T Consensus       237 ~~~~~~li~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         237 TIDVYMIMVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.3e-38  Score=316.57  Aligned_cols=253  Identities=30%  Similarity=0.530  Sum_probs=210.5

Q ss_pred             eeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEe
Q 043828           83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVME  162 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E  162 (586)
                      |++.+.||.|++|.||+|.+..+++.+|+|++..... .......+..|+.+++.+ +||||+++++++.+.+.+++|||
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~e   78 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE-EEGIPSTALREISLLKEL-KHPNIVKLLDVIHTERKLYLVFE   78 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccc-cccccHHHHHHHHHHHhc-CCCCHHHHHhhhhcCCceEEEec
Confidence            6778899999999999999999999999999976542 222345677899999999 89999999999999999999999


Q ss_pred             ccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-c
Q 043828          163 LCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-Q  240 (586)
Q Consensus       163 ~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-~  240 (586)
                      |++ ++|.+++... ..+++..+..++.|++.||.|||+.||+||||+|+||++   +.++.++|+|||.+....... .
T Consensus        79 ~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~---~~~~~~~l~d~g~~~~~~~~~~~  154 (282)
T cd07829          79 YCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILI---NRDGVLKLADFGLARAFGIPLRT  154 (282)
T ss_pred             CcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEE---cCCCCEEEecCCcccccCCCccc
Confidence            997 5899999875 579999999999999999999999999999999999999   567899999999987654332 2


Q ss_pred             eecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc------------------
Q 043828          241 FCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI------------------  300 (586)
Q Consensus       241 ~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~------------------  300 (586)
                      .....++..|+|||.+..  .++.++|||||||++|+|++|.+||...+.......+.....                  
T Consensus       155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (282)
T cd07829         155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKP  234 (282)
T ss_pred             cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccc
Confidence            333456788999999853  578899999999999999999999988776555544432110                  


Q ss_pred             CCC-------CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          301 DFE-------RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       301 ~~~-------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      .++       ...++.++..+.++|.+||..||.+||++.+++.||||
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         235 TFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             cccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence            000       01233457889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.7e-38  Score=309.72  Aligned_cols=246  Identities=22%  Similarity=0.325  Sum_probs=206.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.+.||+|++|.||+|.+. +++.||+|.+.....    ....+.+|+.+++++ +||||+++++++...+.+|+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   78 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKL-RHPKLIQLYAVCTLEEPIYI   78 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHC-CCCCccceeEEEecCCCeee
Confidence            357999999999999999999864 457899999865432    245688999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          160 VMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      ||||+++++|.+++....  .+++..+..++.|++.||.|||++||+||||||+||++   +.++.++|+|||++.....
T Consensus        79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~dfg~~~~~~~  155 (261)
T cd05068          79 VTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLV---GENNICKVADFGLARVIKE  155 (261)
T ss_pred             eeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEE---cCCCCEEECCcceEEEccC
Confidence            999999999999987644  68999999999999999999999999999999999999   5678899999999987643


Q ss_pred             CCce--ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          238 GEQF--CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       238 ~~~~--~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ....  .....+..|+|||++. ..++.++|||||||++|+|++ |..||.+.+.......+.... ..+  ....++..
T Consensus       156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~  232 (261)
T cd05068         156 DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGY-RMP--CPPGCPKE  232 (261)
T ss_pred             CcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-CCC--CCCcCCHH
Confidence            2111  1122345799999886 468889999999999999999 999998888777776665442 222  22357899


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhc
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +.+++.+||+.+|.+||++.+++.
T Consensus       233 ~~~li~~~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         233 LYDIMLDCWKEDPDDRPTFETLQW  256 (261)
T ss_pred             HHHHHHHHhhcCcccCCCHHHHHH
Confidence            999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=1.3e-38  Score=321.74  Aligned_cols=254  Identities=23%  Similarity=0.310  Sum_probs=199.5

Q ss_pred             eecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEec
Q 043828           84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMEL  163 (586)
Q Consensus        84 ~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~  163 (586)
                      .+++.+|.|  |.||.+++..+++.||+|++..... .......+.+|+.+++.+ +||||+++++++...+.+|++|||
T Consensus         5 ~i~~~~~~~--~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~~e~   80 (314)
T cd08216           5 LIGKCFEDL--MIVHLAKHKPTNTLVAVKKINLDSC-SKEDLKLLQQEIITSRQL-QHPNILPYVTSFIVDSELYVVSPL   80 (314)
T ss_pred             hhhHhhcCC--ceEEEEEecCCCCEEEEEEEecccc-chhHHHHHHHHHHHHHhc-CCcchhhhhheeecCCeEEEEEec
Confidence            344444444  5566666677999999999976532 233567899999999999 899999999999999999999999


Q ss_pred             cCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC--
Q 043828          164 CEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE--  239 (586)
Q Consensus       164 ~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~--  239 (586)
                      +++++|.+++...  ..+++..+..++.|++.||.|||+++|+||||||+||++   +.++.+||+|||.+.......  
T Consensus        81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili---~~~~~~kl~d~~~~~~~~~~~~~  157 (314)
T cd08216          81 MAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILL---SGDGKVVLSGLRYSVSMIKHGKR  157 (314)
T ss_pred             cCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEE---ecCCceEEecCccceeecccccc
Confidence            9999999988753  468999999999999999999999999999999999999   556889999999886543221  


Q ss_pred             ------ceecccCCccccchhhhhc---cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCC-------C
Q 043828          240 ------QFCEIVGSPYYMAPEVLRR---NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF-------E  303 (586)
Q Consensus       240 ------~~~~~~gt~~y~aPE~l~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-------~  303 (586)
                            ......++..|+|||++..   .++.++||||+||++|+|++|..||..............+....       +
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (314)
T cd08216         158 QRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYP  237 (314)
T ss_pred             ccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchh
Confidence                  1123457788999999864   48889999999999999999999998765544332222211100       0


Q ss_pred             C-----------------------CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          304 R-----------------------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       304 ~-----------------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .                       .....++..+.+|+.+||..||++|||++++|+||||+..
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~  301 (314)
T cd08216         238 LYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQC  301 (314)
T ss_pred             hhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhh
Confidence            0                       0001234678999999999999999999999999999854

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=3.6e-38  Score=316.99  Aligned_cols=251  Identities=26%  Similarity=0.386  Sum_probs=208.2

Q ss_pred             ccCeeecceeccCCceEEEEEEEc-------cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEI-------ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYE  152 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~-------~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~  152 (586)
                      .++|.+.+.||+|+||.||+|.+.       ..+..+|+|.+....  .......+.+|+.+++.+.+||||+++++++.
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   91 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT   91 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence            468999999999999999999753       234579999886442  22334678899999999978999999999999


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEee
Q 043828          153 DKDAIYLVMELCEGGELFDRIVNK----------------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA  216 (586)
Q Consensus       153 ~~~~~~iv~E~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~  216 (586)
                      ....+|+||||+++|+|.+++...                ..++...+..++.||+.||.|||++||+||||||+||++ 
T Consensus        92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili-  170 (304)
T cd05101          92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLV-  170 (304)
T ss_pred             cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEE-
Confidence            999999999999999999998753                246778889999999999999999999999999999999 


Q ss_pred             cCCCCCceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHH
Q 043828          217 DGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGI  291 (586)
Q Consensus       217 ~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~  291 (586)
                        +.++.+||+|||++........   .....+++.|+|||++. ..++.++|||||||++|+|++ |..||...+..++
T Consensus       171 --~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~  248 (304)
T cd05101         171 --TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL  248 (304)
T ss_pred             --cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence              5678999999999986643221   12234567899999986 458899999999999999998 8899988888887


Q ss_pred             HHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          292 AHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       292 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ...+.......   ....++..+.+||.+||..+|.+|||+.++++.
T Consensus       249 ~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         249 FKLLKEGHRMD---KPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             HHHHHcCCcCC---CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            77765543221   123578999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=3.8e-38  Score=311.53  Aligned_cols=248  Identities=22%  Similarity=0.301  Sum_probs=202.3

Q ss_pred             eeecceeccCCceEEEEEEEccCCc--EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC------
Q 043828           83 YTFGKELGRGEFGITHQCFEIETGE--TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK------  154 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~~--~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~------  154 (586)
                      |.+++.||+|+||.||+|....++.  .+|+|.+..... .....+.+.+|+.+++.+ +||||+++++++...      
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~   78 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC-TRSEMEDFLSEAVCMKEF-DHPNVMRLIGVCLQTVESEGY   78 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcC-CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEccCCcccCC
Confidence            3577899999999999998877765  589998865432 233456788999999999 899999999976422      


Q ss_pred             CeEEEEEeccCCCChHHHHHh------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEee
Q 043828          155 DAIYLVMELCEGGELFDRIVN------KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID  228 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~D  228 (586)
                      ...++||||+++|+|.+++..      ...+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|
T Consensus        79 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~D  155 (272)
T cd05075          79 PSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCML---NENMNVCVAD  155 (272)
T ss_pred             CCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEE---cCCCCEEECC
Confidence            357899999999999888742      2347899999999999999999999999999999999999   5678999999


Q ss_pred             cccccccCCCCce---ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCC
Q 043828          229 FGLSIFFKPGEQF---CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFE  303 (586)
Q Consensus       229 fg~a~~~~~~~~~---~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~  303 (586)
                      ||++.........   ....+++.|+|||.+. ..++.++|||||||++|+|++ |..||...........+..+.... 
T Consensus       156 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~-  234 (272)
T cd05075         156 FGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLK-  234 (272)
T ss_pred             CCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCC-
Confidence            9999876433221   1234567899999986 468899999999999999999 899998877777777766654321 


Q ss_pred             CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       304 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                        ..+.++..+.++|.+||..||.+|||+.+++++
T Consensus       235 --~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         235 --QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             --CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence              123578899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=4.2e-38  Score=309.47  Aligned_cols=245  Identities=22%  Similarity=0.305  Sum_probs=203.1

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.++||+|+||.||+|.+..+ ..+|+|++.....    ..+.+.+|+.+++.+ +||||+++++.+.. ...|+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~----~~~~~~~E~~~l~~l-~~~~i~~~~~~~~~-~~~~l   77 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYI   77 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc----CHHHHHHHHHHHHhC-CCCCcceEEEEECC-CCcEE
Confidence            35799999999999999999987655 4699999875432    235788999999999 89999999998754 56899


Q ss_pred             EEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          160 VMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      ||||+++|+|.+++...  ..+++..+..++.|++.||.|||+.+|+||||||+||++   +.++.++|+|||.+.....
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill---~~~~~~~L~dfg~~~~~~~  154 (262)
T cd05071          78 VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIED  154 (262)
T ss_pred             EEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEE---cCCCcEEeccCCceeeccc
Confidence            99999999999999753  357899999999999999999999999999999999999   5678899999999976543


Q ss_pred             CCce--ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          238 GEQF--CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       238 ~~~~--~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ....  ....++..|+|||++. ..++.++|||||||++|+|++ |..||.+.........+..... .+  ....++..
T Consensus       155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~  231 (262)
T cd05071         155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-MP--CPPECPES  231 (262)
T ss_pred             cccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCC-CC--CccccCHH
Confidence            3221  1234567899999885 468999999999999999999 8899988877776666554321 11  12457899


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhc
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +.++|.+||+++|.+||++.++++
T Consensus       232 l~~li~~~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         232 LHDLMCQCWRKEPEERPTFEYLQA  255 (262)
T ss_pred             HHHHHHHHccCCcccCCCHHHHHH
Confidence            999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=5.5e-38  Score=311.56  Aligned_cols=247  Identities=21%  Similarity=0.312  Sum_probs=201.9

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcE----EEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGET----YACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~----~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      ++|++.+.||+|+||+||+|.+..++..    +++|.+....  .......+..|+.+++++ +||||+++++++. ...
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l-~h~~iv~~~~~~~-~~~   82 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSL-DHAYIVRLLGICP-GAS   82 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc--chHHHHHHHHHHHHHhcC-CCCCcceEEEEEC-CCc
Confidence            5799999999999999999998877774    5666653221  122345677888899999 8999999999875 456


Q ss_pred             EEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      .++++||+++|+|.+++.. ...+++..+..++.||+.||.|||+++++||||||+||++   +.++.+||+|||++...
T Consensus        83 ~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili---~~~~~~kl~Dfg~~~~~  159 (279)
T cd05111          83 LQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILL---KSDSIVQIADFGVADLL  159 (279)
T ss_pred             cEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE---cCCCcEEEcCCccceec
Confidence            7899999999999999976 4568999999999999999999999999999999999999   56789999999999765


Q ss_pred             CCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          236 KPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       236 ~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      .....   .....++..|+|||.+. +.++.++|||||||++|+|++ |..||.+.........+..+.....   ....
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~  236 (279)
T cd05111         160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQ---PQIC  236 (279)
T ss_pred             cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCC---CCCC
Confidence            43321   22345677899999986 568999999999999999998 9999988877666555554432221   1245


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +..+.+++.+||..||.+|||+.++++
T Consensus       237 ~~~~~~li~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         237 TIDVYMVMVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            778999999999999999999999976

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.6e-38  Score=307.19  Aligned_cols=241  Identities=23%  Similarity=0.347  Sum_probs=201.0

Q ss_pred             ceeccCCceEEEEEEEccCC---cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEec
Q 043828           87 KELGRGEFGITHQCFEIETG---ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMEL  163 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~---~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~  163 (586)
                      +.||+|+||.||+|....++   ..+|+|.+......  ...+.+.+|+.+++.+ +||||+++++++. ...+++||||
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~~v~e~   76 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQL-DHPCIVRLIGVCK-GEPLMLVMEL   76 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhc-CCCCeeeEEEEEc-CCceEEEEEe
Confidence            46999999999999875544   78999998765433  2346788999999999 8999999999876 4568999999


Q ss_pred             cCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCcee-
Q 043828          164 CEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC-  242 (586)
Q Consensus       164 ~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~-  242 (586)
                      +++++|.+++.....+++..+..++.|++.||.|||..+++||||||+||++   +.++.+||+|||++.......... 
T Consensus        77 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili---~~~~~~kl~df~~~~~~~~~~~~~~  153 (257)
T cd05060          77 APLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLL---VNRHQAKISDFGMSRALGAGSDYYR  153 (257)
T ss_pred             CCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEE---cCCCcEEeccccccceeecCCcccc
Confidence            9999999999888789999999999999999999999999999999999999   567889999999988664332211 


Q ss_pred             ---cccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          243 ---EIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       243 ---~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                         ...++..|+|||.+. ..++.++|||||||++|+|++ |.+||...+.......+......   .....++..+.++
T Consensus       154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l  230 (257)
T cd05060         154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERL---PRPEECPQEIYSI  230 (257)
T ss_pred             cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcC---CCCCCCCHHHHHH
Confidence               122346799999886 468889999999999999998 99999887777766666554321   2224678999999


Q ss_pred             HHHccCCCCCCCCCHHHHhc
Q 043828          318 VKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       318 i~~~L~~dp~~Rps~~eil~  337 (586)
                      |.+||..+|.+|||+.++++
T Consensus       231 i~~cl~~~p~~Rp~~~~l~~  250 (257)
T cd05060         231 MLSCWKYRPEDRPTFSELES  250 (257)
T ss_pred             HHHHhcCChhhCcCHHHHHH
Confidence            99999999999999999975

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=4.1e-38  Score=312.74  Aligned_cols=247  Identities=21%  Similarity=0.347  Sum_probs=205.5

Q ss_pred             cCeeecceeccCCceEEEEEEEc-----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           81 DKYTFGKELGRGEFGITHQCFEI-----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      .+|.+.++||+|+||.||+|...     .++..+|+|.+...   .......+.+|+.+++.+ +||||+++++++...+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~   80 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVL-QHQHIVRFYGVCTEGR   80 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcC-CCCCCceEEEEEecCC
Confidence            47889999999999999999643     34667888887543   233456789999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhCC---------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCC
Q 043828          156 AIYLVMELCEGGELFDRIVNKG---------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSE  220 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~---------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~  220 (586)
                      .+++||||+++++|.+++....               .+++..+..++.||+.||.|||+.||+||||||+||++   +.
T Consensus        81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~---~~  157 (280)
T cd05092          81 PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLV---GQ  157 (280)
T ss_pred             ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEE---cC
Confidence            9999999999999999987643               47889999999999999999999999999999999999   56


Q ss_pred             CCceEEeecccccccCCCCce---ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHH
Q 043828          221 NSQLKAIDFGLSIFFKPGEQF---CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAI  295 (586)
Q Consensus       221 ~~~vkl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i  295 (586)
                      .+.+||+|||++.........   ....+++.|+|||.+. ..++.++|||||||++|+|++ |.+||...........+
T Consensus       158 ~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~  237 (280)
T cd05092         158 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECI  237 (280)
T ss_pred             CCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHH
Confidence            788999999998765432211   1233567899999886 468899999999999999998 99999887777766666


Q ss_pred             HhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          296 IRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ..+...   .....+++.+.+||.+||+.||.+||++.++++
T Consensus       238 ~~~~~~---~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         238 TQGREL---ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             HcCccC---CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            554322   112357899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=1.9e-38  Score=324.21  Aligned_cols=250  Identities=24%  Similarity=0.373  Sum_probs=199.1

Q ss_pred             cCeeecceeccCCceEEEEEEE-----ccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe-C
Q 043828           81 DKYTFGKELGRGEFGITHQCFE-----IETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED-K  154 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~-----~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~-~  154 (586)
                      ++|++.+.||+|+||+||+|.+     ..+++.||+|++.....  ......+.+|+.++.++.+||||+++++++.. +
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~   84 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   84 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC--hHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence            5899999999999999999974     35678999999865432  22345688899999999779999999998764 4


Q ss_pred             CeEEEEEeccCCCChHHHHHhC----------------------------------------------------------
Q 043828          155 DAIYLVMELCEGGELFDRIVNK----------------------------------------------------------  176 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~----------------------------------------------------------  176 (586)
                      ..+++|||||++|+|.+++...                                                          
T Consensus        85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (343)
T cd05103          85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE  164 (343)
T ss_pred             CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence            5689999999999999988642                                                          


Q ss_pred             ---------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCc---eecc
Q 043828          177 ---------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEI  244 (586)
Q Consensus       177 ---------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~  244 (586)
                               ..++...+..++.||+.||.|||+++|+||||||+||++   +.++.+||+|||++........   ....
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  241 (343)
T cd05103         165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SENNVVKICDFGLARDIYKDPDYVRKGDA  241 (343)
T ss_pred             hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEE---cCCCcEEEEecccccccccCcchhhcCCC
Confidence                     135677788899999999999999999999999999999   5678999999999876532211   1123


Q ss_pred             cCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHH-HHHHHHhCccCCCCCCCCCCCHHHHHHHHHc
Q 043828          245 VGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEG-IAHAIIRGKIDFERDPWPKVSKEAKELVKNM  321 (586)
Q Consensus       245 ~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~  321 (586)
                      .+++.|+|||++. ..++.++|||||||++|+|++ |..||....... ....+..+. ..+.+  ..+++.+.+++.+|
T Consensus       242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~c  318 (343)
T cd05103         242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMRAP--DYTTPEMYQTMLDC  318 (343)
T ss_pred             CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccC-CCCCC--CCCCHHHHHHHHHH
Confidence            4567899999885 468999999999999999997 999997654332 333333332 22222  23678999999999


Q ss_pred             cCCCCCCCCCHHHHhcC
Q 043828          322 LDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       322 L~~dp~~Rps~~eil~h  338 (586)
                      |+.||.+|||+.++++|
T Consensus       319 l~~~p~~Rps~~eil~~  335 (343)
T cd05103         319 WHGEPSQRPTFSELVEH  335 (343)
T ss_pred             ccCChhhCcCHHHHHHH
Confidence            99999999999999986

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=6e-38  Score=307.26  Aligned_cols=243  Identities=24%  Similarity=0.376  Sum_probs=207.3

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      ..+|++.+.||.|+||.||+|..  .|+.+|+|.+.....    ....+.+|+.+++.+ +||||+++++++.+.+..|+
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~   77 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST----AAQAFLAEASVMTTL-RHPNLVQLLGVVLQGNPLYI   77 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh----HHHHHHHHHHHHHhc-CCcceeeeEEEEcCCCCeEE
Confidence            35799999999999999999975  488999999865532    356788999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          160 VMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      ||||+++++|.+++....  .+++..+..++.|++.||.|||++|++||||||+||++   +.++.++|+|||.+.....
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili---~~~~~~~l~d~g~~~~~~~  154 (256)
T cd05039          78 VTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLV---SEDLVAKVSDFGLAKEASQ  154 (256)
T ss_pred             EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEE---eCCCCEEEccccccccccc
Confidence            999999999999997755  68999999999999999999999999999999999999   5678899999999987632


Q ss_pred             CCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      ..  ....++..|+|||.+. +.++.++||||||+++|+|++ |..||...+.......+..... .  .....+++.+.
T Consensus       155 ~~--~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~  229 (256)
T cd05039         155 GQ--DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYR-M--EAPEGCPPEVY  229 (256)
T ss_pred             cc--ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCC-C--CCccCCCHHHH
Confidence            22  1334456799999886 468889999999999999997 9999988887776666554321 1  11235789999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhc
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ++|.+||..+|++|||+.++++
T Consensus       230 ~li~~~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         230 KVMKDCWELDPAKRPTFKQLRE  251 (256)
T ss_pred             HHHHHHhccChhhCcCHHHHHH
Confidence            9999999999999999999986

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=4.4e-38  Score=325.71  Aligned_cols=252  Identities=22%  Similarity=0.311  Sum_probs=203.2

Q ss_pred             ccCeeecceeccCCceEEEEEEEc-----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEI-----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      .++|.+++.||+|+||.||+|++.     .++..||+|++.....  ......+.+|+.+|.++..||||+++++++...
T Consensus        36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~  113 (401)
T cd05107          36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR--SSEKQALMSELKIMSHLGPHLNIVNLLGACTKG  113 (401)
T ss_pred             HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC--hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence            457999999999999999999853     3456899999975432  222356889999999995599999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhCC---------------------------------------------------------
Q 043828          155 DAIYLVMELCEGGELFDRIVNKG---------------------------------------------------------  177 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~~---------------------------------------------------------  177 (586)
                      +.+++|||||++|+|.+++...+                                                         
T Consensus       114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (401)
T cd05107         114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ  193 (401)
T ss_pred             CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence            99999999999999999986431                                                         


Q ss_pred             -----------------------------------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEee
Q 043828          178 -----------------------------------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA  216 (586)
Q Consensus       178 -----------------------------------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~  216 (586)
                                                               .++...+..++.||+.||.|||+.+|+||||||+|||+ 
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl-  272 (401)
T cd05107         194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLI-  272 (401)
T ss_pred             cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEE-
Confidence                                                     25666788899999999999999999999999999999 


Q ss_pred             cCCCCCceEEeecccccccCCCC---ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHH
Q 043828          217 DGSENSQLKAIDFGLSIFFKPGE---QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGI  291 (586)
Q Consensus       217 ~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~  291 (586)
                        +..+.+||+|||++.......   ......+++.|+|||.+. ..++.++|||||||++|+|++ |..||......+.
T Consensus       273 --~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~  350 (401)
T cd05107         273 --CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ  350 (401)
T ss_pred             --eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH
Confidence              456789999999987643221   112345678899999986 458889999999999999998 8999977655554


Q ss_pred             HHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          292 AHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       292 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ...........+.  ...++..+.+|+.+||..+|.+||++++|++.
T Consensus       351 ~~~~~~~~~~~~~--p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         351 FYNAIKRGYRMAK--PAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             HHHHHHcCCCCCC--CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            4443333322222  23578999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=5.4e-38  Score=309.99  Aligned_cols=248  Identities=23%  Similarity=0.374  Sum_probs=206.8

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCc---EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGE---TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ..|++.+.||+|+||.||+|.+..++.   .||+|++....  .......+..|+.+++.+ +||||+++++++.....+
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~   80 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSRPV   80 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCcCcceEEEEECCCCce
Confidence            468999999999999999999877665   59999886542  233456789999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      ++||||+++++|.+++.. .+.+++..+..++.|++.||.|||++|++||||||+||++   +.++.+||+|||++....
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili---~~~~~~kl~dfg~~~~~~  157 (269)
T cd05065          81 MIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLE  157 (269)
T ss_pred             EEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEE---cCCCcEEECCCccccccc
Confidence            999999999999998875 3568999999999999999999999999999999999999   567899999999987654


Q ss_pred             CCCce---eccc---CCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCC
Q 043828          237 PGEQF---CEIV---GSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWP  308 (586)
Q Consensus       237 ~~~~~---~~~~---gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  308 (586)
                      .....   ....   .+..|+|||.+. ..++.++||||+||++|+|++ |..||...........+... ...  +...
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~-~~~--~~~~  234 (269)
T cd05065         158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD-YRL--PPPM  234 (269)
T ss_pred             cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-CcC--CCcc
Confidence            32211   1111   245799999986 468899999999999999886 99999988877777766433 222  2234


Q ss_pred             CCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          309 KVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .++..+.+++.+||..+|.+||++.+++.
T Consensus       235 ~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         235 DCPTALHQLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            67889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=6.8e-38  Score=312.80  Aligned_cols=247  Identities=24%  Similarity=0.345  Sum_probs=203.1

Q ss_pred             CeeecceeccCCceEEEEEEEcc-----CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           82 KYTFGKELGRGEFGITHQCFEIE-----TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      +|++.+.||+|+||.||+|.+..     ....+++|.+....  .......+.+|+.+++.+ .||||+++++.+...+.
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~   77 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQV-NHPHVIKLYGACSQDGP   77 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC--CHHHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCC
Confidence            57889999999999999998643     23568888776443  222346788999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhC------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCc
Q 043828          157 IYLVMELCEGGELFDRIVNK------------------------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPEN  212 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~------------------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~N  212 (586)
                      .++|+||+.+++|.+++...                        ..+++..+..++.|++.||.|||+.+|+||||||+|
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~n  157 (290)
T cd05045          78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARN  157 (290)
T ss_pred             cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhhe
Confidence            99999999999999988642                        247788999999999999999999999999999999


Q ss_pred             eEeecCCCCCceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCC
Q 043828          213 FLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAET  287 (586)
Q Consensus       213 ill~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~  287 (586)
                      |++   +.++.+||+|||++........   .....++..|+|||.+. ..++.++|||||||++|+|++ |..||.+..
T Consensus       158 ill---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~  234 (290)
T cd05045         158 VLV---AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA  234 (290)
T ss_pred             EEE---cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence            999   5567899999999876432221   12234567899999875 458899999999999999998 999998888


Q ss_pred             HHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          288 EEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       288 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ...+...+.... ..+  ....++..+.+++.+||+.+|.+||++.++++
T Consensus       235 ~~~~~~~~~~~~-~~~--~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         235 PERLFNLLKTGY-RME--RPENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             HHHHHHHHhCCC-CCC--CCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            777766655432 222  22457899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-39  Score=332.58  Aligned_cols=247  Identities=30%  Similarity=0.447  Sum_probs=201.4

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC-----
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD-----  155 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~-----  155 (586)
                      ..|..-+.||+||||.||+++++.+|+.||||.+.+...  ....+..-+|+++|++| +|||||+++++-++..     
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~--~r~~e~~~~EieilkKL-nh~NIVk~f~iee~~~~~~~~   89 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESS--LRPRERWCREIEILKKL-NHPNIVKLFDIEETKFLGLVT   89 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhcc--cchHHHHHHHHHHHHHc-CchhhhhhcccCCccccCccc
Confidence            457788899999999999999999999999999977653  33467889999999999 7999999999866543     


Q ss_pred             -eEEEEEeccCCCChHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCC-CCCceEEeecc
Q 043828          156 -AIYLVMELCEGGELFDRIVN---KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFG  230 (586)
Q Consensus       156 -~~~iv~E~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~-~~~~vkl~Dfg  230 (586)
                       ...+|||||.||+|...+..   ...+++.....++..+..||.|||++||+||||||.||++..+. .....||+|||
T Consensus        90 ~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG  169 (732)
T KOG4250|consen   90 RLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFG  169 (732)
T ss_pred             ccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccc
Confidence             56899999999999999964   45799999999999999999999999999999999999997544 55678999999


Q ss_pred             cccccCCCCceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHH----HHHHHHHhCc-----
Q 043828          231 LSIFFKPGEQFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEE----GIAHAIIRGK-----  299 (586)
Q Consensus       231 ~a~~~~~~~~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~i~~~~-----  299 (586)
                      .|+..+.+....+.+||+.|.+||++.  +.|+..+|.|||||++|+++||..||......    ++...+...+     
T Consensus       170 ~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~  249 (732)
T KOG4250|consen  170 AARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVA  249 (732)
T ss_pred             ccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCcee
Confidence            999999999999999999999999997  57899999999999999999999999543222    2222222211     


Q ss_pred             ----------cCCC--CCCCCCCC----HHHHHHHHHccCCCCCCCC
Q 043828          300 ----------IDFE--RDPWPKVS----KEAKELVKNMLDPNPYNRL  330 (586)
Q Consensus       300 ----------~~~~--~~~~~~~~----~~~~~li~~~L~~dp~~Rp  330 (586)
                                +.+.  .+....++    ..+-..+..+|..+|.+|.
T Consensus       250 i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  250 IGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             EeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence                      1110  11111223    3455678888999999998

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=2.3e-38  Score=310.98  Aligned_cols=252  Identities=26%  Similarity=0.479  Sum_probs=208.3

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccC--ChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK--TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +|.+.+.||+|+||.||++.+..++..+++|++......  .......+..|+.+++.+ +||||+++++++.+....++
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   79 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL-DHPAIVKFHASFLERDAFCI   79 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhC-CCCcHHHHHHHHhcCCceEE
Confidence            589999999999999999998887777777766543221  112234567799999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          160 VMELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      ||||+++++|.+++..    ...+++..+..++.|++.||.|||+.|++|+||+|+||++.    .+.++|+|||++...
T Consensus        80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~----~~~~~l~d~g~~~~~  155 (260)
T cd08222          80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK----NNLLKIGDFGVSRLL  155 (260)
T ss_pred             EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee----cCCEeecccCceeec
Confidence            9999999999888753    35689999999999999999999999999999999999994    246999999998765


Q ss_pred             CCCC-ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          236 KPGE-QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       236 ~~~~-~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      .... ......|++.|+|||.+. ..++.++|+||+|+++|+|++|..||...........+..+.....   ...++..
T Consensus       156 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  232 (260)
T cd08222         156 MGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSL---PETYSRQ  232 (260)
T ss_pred             CCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCC---cchhcHH
Confidence            4332 223456889999999886 4578899999999999999999999987776666666554432221   1357889


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      +.++|.+||..+|++||++.++++||||
T Consensus       233 ~~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         233 LNSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             HHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence            9999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.6e-38  Score=314.23  Aligned_cols=250  Identities=22%  Similarity=0.318  Sum_probs=201.5

Q ss_pred             cCeeecceeccCCceEEEEEEEccC--------------CcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIET--------------GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT  146 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~--------------~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~  146 (586)
                      .+|++.+.||+|+||.||+|++..+              ...||+|.+....  .......+.+|+++++++ +||||++
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l-~h~~i~~   81 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRL-KNPNIIR   81 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhC-CCCCcCe
Confidence            5899999999999999999986543              2358999986542  222345788999999999 8999999


Q ss_pred             EEEEEEeCCeEEEEEeccCCCChHHHHHhCC------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceE
Q 043828          147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKG------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFL  214 (586)
Q Consensus       147 l~~~~~~~~~~~iv~E~~~gg~L~~~l~~~~------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nil  214 (586)
                      +++++...+..++||||+++++|.+++....            .+++..+..++.|++.||.|||++|++||||||+||+
T Consensus        82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil  161 (295)
T cd05097          82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL  161 (295)
T ss_pred             EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence            9999999999999999999999999886432            3678889999999999999999999999999999999


Q ss_pred             eecCCCCCceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh--CCCCCCCCCH
Q 043828          215 FADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC--GVPPFWAETE  288 (586)
Q Consensus       215 l~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~--g~~pf~~~~~  288 (586)
                      +   +.++.+||+|||++........   .....+++.|+|||++. +.++.++|||||||++|+|++  |..||...+.
T Consensus       162 l---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~  238 (295)
T cd05097         162 V---GNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD  238 (295)
T ss_pred             E---cCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh
Confidence            9   5567899999999876543221   12234567899999875 568999999999999999988  6788887776


Q ss_pred             HHHHHHHHh-----CccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          289 EGIAHAIIR-----GKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       289 ~~~~~~i~~-----~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ......+..     ....+ ....+..+..+.+|+.+||..||.+|||++++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         239 EQVIENTGEFFRNQGRQIY-LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             HHHHHHHHHhhhhcccccc-CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            665544322     11111 1122357889999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=7.4e-38  Score=307.37  Aligned_cols=245  Identities=21%  Similarity=0.298  Sum_probs=203.3

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.+.||+|+||.||+|... .+..+|+|.+.....    ..+.+.+|+.+++++ +||||+++++++. ....|+
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l-~~~~i~~~~~~~~-~~~~~l   77 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM----SPESFLEEAQIMKKL-RHDKLVQLYAVVS-EEPIYI   77 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC----CHHHHHHHHHHHHhc-CCCceEEEEeEEC-CCCcEE
Confidence            468999999999999999999764 566799999875433    235788999999999 8999999999875 456899


Q ss_pred             EEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          160 VMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      +|||+++++|.+++...  ..+++..+..++.|++.||.|||+++|+||||||+||++   +.++.++|+|||++.....
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili---~~~~~~~l~dfg~~~~~~~  154 (260)
T cd05070          78 VTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILV---GDGLVCKIADFGLARLIED  154 (260)
T ss_pred             EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEE---eCCceEEeCCceeeeeccC
Confidence            99999999999998753  358999999999999999999999999999999999999   4577899999999976543


Q ss_pred             CCce--ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          238 GEQF--CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       238 ~~~~--~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ....  ....++..|+|||.+. ..++.++||||||+++|+|++ |.+||...+.......+.... ..  +.....+..
T Consensus       155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~  231 (260)
T cd05070         155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY-RM--PCPQDCPIS  231 (260)
T ss_pred             cccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-CC--CCCCcCCHH
Confidence            3211  1234566799999875 468889999999999999999 899998887777777665432 22  122457889


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhc
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +.+|+.+||.++|.+|||+.++++
T Consensus       232 ~~~li~~~l~~~p~~Rpt~~~l~~  255 (260)
T cd05070         232 LHELMLQCWKKDPEERPTFEYLQS  255 (260)
T ss_pred             HHHHHHHHcccCcccCcCHHHHHH
Confidence            999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=7.6e-38  Score=311.34  Aligned_cols=248  Identities=24%  Similarity=0.335  Sum_probs=195.8

Q ss_pred             cCe-eecceeccCCceEEEEEE----EccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe--
Q 043828           81 DKY-TFGKELGRGEFGITHQCF----EIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED--  153 (586)
Q Consensus        81 ~~y-~~~~~lG~G~~g~V~~~~----~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~--  153 (586)
                      ++| ++.+.||+|+||+||++.    ...++..+|+|.+.....  ......+.+|+.+++.+ +||||+++++++..  
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~   79 (283)
T cd05080           3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG--QQNTSGWKKEINILKTL-YHENIVKYKGCCSEQG   79 (283)
T ss_pred             hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC--hHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCC
Confidence            455 999999999999998864    335678999999865432  22346788999999999 89999999998765  


Q ss_pred             CCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          154 KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       154 ~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                      ...+|+||||+++++|.+++... .+++..+..++.|++.||.|||+++|+||||||+||++   +.++.++|+|||++.
T Consensus        80 ~~~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~~l~dfg~~~  155 (283)
T cd05080          80 GKGLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLL---DNDRLVKIGDFGLAK  155 (283)
T ss_pred             CceEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEE---cCCCcEEEeeccccc
Confidence            34689999999999999988664 59999999999999999999999999999999999999   567889999999988


Q ss_pred             ccCCCCc----eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHH--HH------------HH
Q 043828          234 FFKPGEQ----FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEG--IA------------HA  294 (586)
Q Consensus       234 ~~~~~~~----~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~------------~~  294 (586)
                      .......    .....++..|+|||++. ..++.++|||||||++|+|++|..||......-  ..            ..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (283)
T cd05080         156 AVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIE  235 (283)
T ss_pred             ccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhh
Confidence            6643322    11234566799999986 468899999999999999999999986533210  00            00


Q ss_pred             HHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          295 IIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       295 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ........+  ....++..+.+++.+||+.+|++|||+++++.
T Consensus       236 ~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         236 LLERGMRLP--CPKNCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             hhhcCCCCC--CCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            011111111  12356789999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=8.4e-38  Score=306.33  Aligned_cols=246  Identities=28%  Similarity=0.410  Sum_probs=209.2

Q ss_pred             eeecceeccCCceEEEEEEEccCC----cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           83 YTFGKELGRGEFGITHQCFEIETG----ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~----~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      +++.+.||.|+||.||+|.+...+    ..+|+|++......  .....+..|+.+++.+ +||||+++++++.+.+..|
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~   77 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADE--QQIEEFLREARIMRKL-DHPNIVKLLGVCTEEEPLM   77 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCCh--HHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCeeE
Confidence            357789999999999999987766    88999998654321  1456889999999999 9999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          159 LVMELCEGGELFDRIVNKGH--YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      ++|||+++++|.+++.....  +++..+..++.|++.||.|||+.+++||||+|+||++   +..+.++|+|||++....
T Consensus        78 ~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~---~~~~~~~l~dfg~~~~~~  154 (258)
T smart00219       78 IVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLV---GENLVVKISDFGLSRDLY  154 (258)
T ss_pred             EEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEE---ccCCeEEEcccCCceecc
Confidence            99999999999999876544  8999999999999999999999999999999999999   567799999999997765


Q ss_pred             CCCcee--cccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCH
Q 043828          237 PGEQFC--EIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       237 ~~~~~~--~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      ......  ...+++.|+|||.+. ..++.++||||+||++|+|++ |.+||...+.......+........   ...++.
T Consensus       155 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~  231 (258)
T smart00219      155 DDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPK---PENCPP  231 (258)
T ss_pred             cccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCC---CCcCCH
Confidence            432222  133678999999985 468899999999999999998 8899988888777777766553322   234789


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .+.+++.+||..+|.+|||+.++++
T Consensus       232 ~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      232 EIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             HHHHHHHHHCcCChhhCcCHHHHHh
Confidence            9999999999999999999999986

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=1.2e-37  Score=307.35  Aligned_cols=248  Identities=23%  Similarity=0.357  Sum_probs=206.8

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCc---EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGE---TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .+|+..+.||+|+||.||+|+...++.   .+|+|++....  .......+..|+.+++++ +||||+++.+++...+..
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   81 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQF-SHHNIIRLEGVVTKFKPA   81 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEccCCCc
Confidence            478899999999999999999876655   68999886542  222346788999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      |+||||+++++|.+++... +.+++..+..++.|++.||.|||+.|++||||||+||++   +.++.+||+|||++....
T Consensus        82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili---~~~~~~kl~dfg~~~~~~  158 (268)
T cd05063          82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILV---NSNLECKVSDFGLSRVLE  158 (268)
T ss_pred             EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEE---cCCCcEEECCCccceecc
Confidence            9999999999999988764 568999999999999999999999999999999999999   567789999999987654


Q ss_pred             CCCc--ee--cccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          237 PGEQ--FC--EIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       237 ~~~~--~~--~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      ....  ..  ....++.|+|||++. +.++.++|||||||++|+|++ |..||...+.......+.... ..  +....+
T Consensus       159 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~-~~--~~~~~~  235 (268)
T cd05063         159 DDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF-RL--PAPMDC  235 (268)
T ss_pred             cccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC-CC--CCCCCC
Confidence            3221  11  112345799999886 468899999999999999997 999999888877777776542 21  222357


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +..+.+++.+||..+|.+||++.++++
T Consensus       236 ~~~~~~li~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         236 PSAVYQLMLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            889999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=9.1e-38  Score=306.00  Aligned_cols=242  Identities=23%  Similarity=0.345  Sum_probs=202.6

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEE-EeCCeEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAY-EDKDAIY  158 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~-~~~~~~~  158 (586)
                      ..+|++.+.||+|+||.||++..  .|..+|+|.+....     ..+.+.+|+.+++++ +||||+++++++ ..++.+|
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~-----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~   76 (256)
T cd05082           5 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLY   76 (256)
T ss_pred             HHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCc-----hHHHHHHHHHHHHhC-CCCCeeeEEEEEEcCCCceE
Confidence            35899999999999999999965  57889999875432     245788999999999 899999999975 4557799


Q ss_pred             EEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          159 LVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +||||+++++|.+++....  .+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||++....
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~dfg~~~~~~  153 (256)
T cd05082          77 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEAS  153 (256)
T ss_pred             EEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEE---cCCCcEEecCCccceecc
Confidence            9999999999999987643  37899999999999999999999999999999999999   567899999999987643


Q ss_pred             CCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          237 PGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      ...  ....++..|+|||++.. .++.++|||||||++|+|++ |..||...........+..+..   ....+.+++.+
T Consensus       154 ~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  228 (256)
T cd05082         154 STQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---MDAPDGCPPVV  228 (256)
T ss_pred             ccC--CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---CCCCCCCCHHH
Confidence            322  22345668999999864 58889999999999999997 9999988777776666655422   22234678999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhc
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .++|.+||+.+|.+|||+.++++
T Consensus       229 ~~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         229 YDVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             HHHHHHHhcCChhhCcCHHHHHH
Confidence            99999999999999999999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=1.2e-37  Score=305.20  Aligned_cols=241  Identities=26%  Similarity=0.347  Sum_probs=197.6

Q ss_pred             eeccCCceEEEEEEEc--cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccC
Q 043828           88 ELGRGEFGITHQCFEI--ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCE  165 (586)
Q Consensus        88 ~lG~G~~g~V~~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~  165 (586)
                      .||+|+||.||+|.+.  ..+..+|+|++....  .....+.+.+|+.+++++ +||||++++++++. ..+++||||++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~-~~~~lv~e~~~   77 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQL-DNPYIVRMIGVCEA-EALMLVMEMAS   77 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhc-CCCCeEEEEEEEcC-CCeEEEEEeCC
Confidence            4899999999999764  345679999886542  233346788999999999 89999999998864 57899999999


Q ss_pred             CCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCce---
Q 043828          166 GGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF---  241 (586)
Q Consensus       166 gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~---  241 (586)
                      +++|.+++.. ...+++..+..++.|++.||.|||++|++||||||+||++   +.++.+||+|||++.........   
T Consensus        78 ~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~---~~~~~~kl~dfg~~~~~~~~~~~~~~  154 (257)
T cd05115          78 GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLL---VNQHYAKISDFGLSKALGADDSYYKA  154 (257)
T ss_pred             CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEE---cCCCcEEeccCCccccccCCccceec
Confidence            9999998875 4568999999999999999999999999999999999999   56788999999998755432211   


Q ss_pred             -ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHH
Q 043828          242 -CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV  318 (586)
Q Consensus       242 -~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  318 (586)
                       ....+++.|+|||.+. ..++.++|||||||++|+|++ |..||...........+..+... .  ..+..++++.++|
T Consensus       155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~l~~li  231 (257)
T cd05115         155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRL-D--CPAECPPEMYALM  231 (257)
T ss_pred             cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC-C--CCCCCCHHHHHHH
Confidence             1122357899999986 468889999999999999996 99999988877777666655422 1  1235789999999


Q ss_pred             HHccCCCCCCCCCHHHHhcC
Q 043828          319 KNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       319 ~~~L~~dp~~Rps~~eil~h  338 (586)
                      .+||..+|++||++.++++.
T Consensus       232 ~~c~~~~~~~Rp~~~~i~~~  251 (257)
T cd05115         232 KDCWIYKWEDRPNFAKVEER  251 (257)
T ss_pred             HHHcCCChhhCcCHHHHHHH
Confidence            99999999999999998753

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=1e-37  Score=306.30  Aligned_cols=245  Identities=23%  Similarity=0.344  Sum_probs=204.4

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|+++++||+|+||.||+|.. .+++.+|+|.+.....    ....+.+|+.+++++ +||||+++++++. .+.+|+
T Consensus         5 ~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~   77 (260)
T cd05067           5 RETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSM----SPEAFLAEANLMKQL-QHPRLVRLYAVVT-QEPIYI   77 (260)
T ss_pred             hHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCC----cHHHHHHHHHHHHhc-CCcCeeeEEEEEc-cCCcEE
Confidence            46899999999999999999975 4678899999865432    246788999999999 8999999999875 457899


Q ss_pred             EEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          160 VMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      +|||+++++|.+++...  ..+++..+..++.|++.||.|||+.|++||||||+||++   +.++.++|+|||++.....
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i---~~~~~~~l~dfg~~~~~~~  154 (260)
T cd05067          78 ITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILV---SETLCCKIADFGLARLIED  154 (260)
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEE---cCCCCEEEccCcceeecCC
Confidence            99999999999988653  468899999999999999999999999999999999999   5678899999999876542


Q ss_pred             CCc--eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          238 GEQ--FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       238 ~~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ...  .....++..|+|||++. ..++.++|||||||++|+|++ |.+||.+.+.......+..... .  +.....+.+
T Consensus       155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~  231 (260)
T cd05067         155 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYR-M--PRPDNCPEE  231 (260)
T ss_pred             CCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCC-C--CCCCCCCHH
Confidence            221  12334567899999986 467889999999999999998 9999988877776666554421 1  222457889


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhc
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +.++|.+||..+|++|||+++++.
T Consensus       232 ~~~li~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         232 LYELMRLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             HHHHHHHHccCChhhCCCHHHHHH
Confidence            999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=8.5e-38  Score=311.81  Aligned_cols=248  Identities=23%  Similarity=0.330  Sum_probs=206.4

Q ss_pred             cCeeecceeccCCceEEEEEEEc-----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           81 DKYTFGKELGRGEFGITHQCFEI-----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      ++|++.+.||+|+||.||+|.+.     .++..+|+|++.....  ......+.+|+.+++++ +||||+++++++.++.
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~ei~~l~~l-~h~~iv~~~~~~~~~~   81 (288)
T cd05050           5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS--ADMQADFQREAALMAEF-DHPNIVKLLGVCAVGK   81 (288)
T ss_pred             HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC--HHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCC
Confidence            57999999999999999999864     3678899998865431  22345688999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhCC----------------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCce
Q 043828          156 AIYLVMELCEGGELFDRIVNKG----------------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENF  213 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~----------------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Ni  213 (586)
                      .+|+||||+++++|.+++....                      .+++..+..++.|++.||.|||+++++||||||+||
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ni  161 (288)
T cd05050          82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNC  161 (288)
T ss_pred             ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhhe
Confidence            9999999999999999987432                      367888899999999999999999999999999999


Q ss_pred             EeecCCCCCceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCH
Q 043828          214 LFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETE  288 (586)
Q Consensus       214 ll~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~  288 (586)
                      ++   +.++.++|+|||++........   .....+++.|+|||.+. ..++.++|||||||++|+|++ |..||.+.+.
T Consensus       162 l~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~  238 (288)
T cd05050         162 LV---GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH  238 (288)
T ss_pred             Ee---cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            99   5678999999999875432211   11233466799999876 568999999999999999997 8889988888


Q ss_pred             HHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       289 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .+....+..+.....   ...++..+.+||.+||+.+|.+|||+.|+++
T Consensus       239 ~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         239 EEVIYYVRDGNVLSC---PDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             HHHHHHHhcCCCCCC---CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            777777666544211   1357889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=1e-37  Score=317.88  Aligned_cols=250  Identities=26%  Similarity=0.387  Sum_probs=206.1

Q ss_pred             cCeeecceeccCCceEEEEEEEccC-------CcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIET-------GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED  153 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~-------~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~  153 (586)
                      .+|++++.||+|+||.||+|.+...       +..+|+|.+....  .......+.+|+.+++++.+||||+++++++..
T Consensus        12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~   89 (334)
T cd05100          12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ   89 (334)
T ss_pred             hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence            5799999999999999999976432       2368999876432  223356788999999999789999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeec
Q 043828          154 KDAIYLVMELCEGGELFDRIVNKG----------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFAD  217 (586)
Q Consensus       154 ~~~~~iv~E~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~  217 (586)
                      .+.+|++|||+++|+|.+++....                .++...+..++.|++.||.|||++||+||||||+||++  
T Consensus        90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill--  167 (334)
T cd05100          90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLV--  167 (334)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE--
Confidence            999999999999999999987532                36778889999999999999999999999999999999  


Q ss_pred             CCCCCceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHH
Q 043828          218 GSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIA  292 (586)
Q Consensus       218 ~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~  292 (586)
                       +.++.+||+|||+++.......   .....++..|+|||++. ..++.++|||||||++|+|++ |..||.+.+..+..
T Consensus       168 -~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~  246 (334)
T cd05100         168 -TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF  246 (334)
T ss_pred             -cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence             5667899999999876543221   11223456799999986 468899999999999999998 89999988887777


Q ss_pred             HHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          293 HAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       293 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ..+......   ......+..+.+||.+||+.+|.+|||+.+++++
T Consensus       247 ~~~~~~~~~---~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         247 KLLKEGHRM---DKPANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             HHHHcCCCC---CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            766554321   1123568899999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=1.5e-37  Score=305.30  Aligned_cols=244  Identities=23%  Similarity=0.302  Sum_probs=202.1

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|.+.+.||+|++|.||+|.+..+ ..+|+|.+.....    ..+.+.+|+.+++.+ +||||+++++++. .+..|+|
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~v   78 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM----MPEAFLQEAQIMKKL-RHDKLVPLYAVVS-EEPIYIV   78 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc----cHHHHHHHHHHHHhC-CCCCeeeEEEEEc-CCCcEEE
Confidence            5799999999999999999987554 4689998764432    235688899999999 8999999999875 4568999


Q ss_pred             EeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          161 MELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      |||+++++|.+++...  ..+++..+..++.|++.||.|||+.||+|+||||+||++   +.++.++|+|||.+......
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill---~~~~~~~l~dfg~~~~~~~~  155 (260)
T cd05069          79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILV---GDNLVCKIADFGLARLIEDN  155 (260)
T ss_pred             EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEE---cCCCeEEECCCccceEccCC
Confidence            9999999999998763  347899999999999999999999999999999999999   56788999999999765432


Q ss_pred             Cc--eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          239 EQ--FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       239 ~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      ..  .....++..|+|||.+. ..++.++|||||||++|+|++ |..||.+....+....+.... ..  +.....+..+
T Consensus       156 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~  232 (260)
T cd05069         156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGY-RM--PCPQGCPESL  232 (260)
T ss_pred             cccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CC--CCCcccCHHH
Confidence            21  12234567899999886 468889999999999999999 999998888777766665442 11  2224578999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhc
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .+++.+||.+||.+||+++++++
T Consensus       233 ~~li~~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         233 HELMKLCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             HHHHHHHccCCcccCcCHHHHHH
Confidence            99999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=1.2e-37  Score=305.38  Aligned_cols=242  Identities=26%  Similarity=0.385  Sum_probs=203.3

Q ss_pred             ceeccCCceEEEEEEEcc-CCc--EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEec
Q 043828           87 KELGRGEFGITHQCFEIE-TGE--TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMEL  163 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~-~~~--~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~  163 (586)
                      +.||+|++|.||+|.+.. .+.  .+|+|.+......  ...+.+.+|+.+++++ +||||+++++++.. ..+++||||
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~-~~~~~v~e~   76 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSL-DHENLIRLYGVVLT-HPLMMVTEL   76 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhc-CCCCccceeEEEcC-CeEEEEEEe
Confidence            468999999999998765 333  6899998776543  3457889999999999 89999999999988 899999999


Q ss_pred             cCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCc-
Q 043828          164 CEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ-  240 (586)
Q Consensus       164 ~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~-  240 (586)
                      +++++|.+++....  .+++..++.++.|++.||.|||++|++||||+|+||++   +.++.+||+|||++........ 
T Consensus        77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~---~~~~~~kl~dfg~~~~~~~~~~~  153 (257)
T cd05040          77 APLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILL---ASDDKVKIGDFGLMRALPQNEDH  153 (257)
T ss_pred             cCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEE---ecCCEEEeccccccccccccccc
Confidence            99999999997754  68999999999999999999999999999999999999   5568999999999887643221 


Q ss_pred             ---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          241 ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       241 ---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                         .....++..|+|||.+. ..++.++|||||||++|+|++ |..||...+..+....+.........+  ..++..+.
T Consensus       154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  231 (257)
T cd05040         154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERP--EACPQDIY  231 (257)
T ss_pred             eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCC--ccCCHHHH
Confidence               11245678899999986 468899999999999999998 999998888777777666533322221  35688999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhc
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +++.+||..+|++|||+.++++
T Consensus       232 ~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         232 NVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             HHHHHHCCCCcccCCCHHHHHH
Confidence            9999999999999999999986

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=9.4e-38  Score=309.29  Aligned_cols=250  Identities=22%  Similarity=0.356  Sum_probs=209.3

Q ss_pred             cCeeecceeccCCceEEEEEEEcc-----CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIE-----TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      ++|++...||.|+||.||+|+...     +...+++|.+....  .......+.+|+.+++++ +||||+++++++.+.+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~   81 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKL-SHKNVVRLLGLCREAE   81 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhc-CCcceeeeEEEECCCC
Confidence            579999999999999999998653     34678888875432  222346789999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhCC---------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEE
Q 043828          156 AIYLVMELCEGGELFDRIVNKG---------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKA  226 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~---------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl  226 (586)
                      ..|+||||+++|+|.+++....         .+++..+..++.|++.||.|||+++|+||||||+||++   +..+.++|
T Consensus        82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili---~~~~~~~l  158 (275)
T cd05046          82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLV---SSQREVKV  158 (275)
T ss_pred             cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEE---eCCCcEEE
Confidence            9999999999999999997655         68999999999999999999999999999999999999   56788999


Q ss_pred             eecccccccCCCC--ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCC
Q 043828          227 IDFGLSIFFKPGE--QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDF  302 (586)
Q Consensus       227 ~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~  302 (586)
                      +|||++.......  ......+++.|+|||.+. ..++.++|||||||++|+|++ |..||...........+..+...+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~  238 (275)
T cd05046         159 SLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLEL  238 (275)
T ss_pred             cccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCC
Confidence            9999986542221  223345677899999875 457889999999999999998 889998877777777766655544


Q ss_pred             CCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          303 ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       303 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +..  ..++..+.+++.+||+.+|.+|||+.+++..
T Consensus       239 ~~~--~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         239 PVP--EGCPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             CCC--CCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            332  3578999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=100.00  E-value=1.9e-37  Score=332.52  Aligned_cols=341  Identities=20%  Similarity=0.270  Sum_probs=224.4

Q ss_pred             cccCeeecceeccCCceEEEEEEEccC----CcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEE----
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIET----GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEA----  150 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~----~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~----  150 (586)
                      ..++|.+.+.||+|+||.||+|++..+    +..||+|++.....     .+....|  .++.. .+.+++.++..    
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-----~e~~~~e--~l~~~-~~~~~~~~~~~~~~~  201 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-----VEIWMNE--RVRRA-CPNSCADFVYGFLEP  201 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-----hHHHHHH--HHHhh-chhhHHHHHHhhhcc
Confidence            457899999999999999999999888    89999998754221     1111111  11222 12222222211    


Q ss_pred             --EEeCCeEEEEEeccCCCChHHHHHhCCC--------------------CCHHHHHHHHHHHHHHHHHHHHcCceeccC
Q 043828          151 --YEDKDAIYLVMELCEGGELFDRIVNKGH--------------------YTERAAAAVGKTILRIVKVCHENGVMHRDL  208 (586)
Q Consensus       151 --~~~~~~~~iv~E~~~gg~L~~~l~~~~~--------------------~~~~~~~~i~~qi~~~l~~lH~~~ivHrDl  208 (586)
                        ......++|||||+.+++|.+++.....                    .....+..++.||+.||.|||+++|+||||
T Consensus       202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDL  281 (566)
T PLN03225        202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDV  281 (566)
T ss_pred             cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcC
Confidence              2356789999999999999998865321                    123456789999999999999999999999


Q ss_pred             CCCceEeecCCCCCceEEeecccccccCCC--CceecccCCccccchhhhhc-----------------------cCCCc
Q 043828          209 KPENFLFADGSENSQLKAIDFGLSIFFKPG--EQFCEIVGSPYYMAPEVLRR-----------------------NYGPE  263 (586)
Q Consensus       209 kp~Nill~~~~~~~~vkl~Dfg~a~~~~~~--~~~~~~~gt~~y~aPE~l~~-----------------------~~~~~  263 (586)
                      ||+|||++  ...+.+||+|||+|......  ......+|++.|+|||.+..                       .++.+
T Consensus       282 KP~NILl~--~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k  359 (566)
T PLN03225        282 KPQNIIFS--EGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDR  359 (566)
T ss_pred             CHHHEEEe--CCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCC
Confidence            99999995  23578999999999865432  22345678999999997531                       13445


Q ss_pred             chHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCC-------CC----------CCCCCCCHHHHHHHHHccCCCC
Q 043828          264 IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF-------ER----------DPWPKVSKEAKELVKNMLDPNP  326 (586)
Q Consensus       264 ~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-------~~----------~~~~~~~~~~~~li~~~L~~dp  326 (586)
                      +|||||||+||+|+++..|+... .......+......+       ..          ..+......+.+||.+||+.||
T Consensus       360 ~DVwSlGviL~el~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP  438 (566)
T PLN03225        360 FDIYSAGLIFLQMAFPNLRSDSN-LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG  438 (566)
T ss_pred             cccHHHHHHHHHHHhCcCCCchH-HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence            79999999999999977665321 111111111111100       00          0011123446699999999999


Q ss_pred             CCCCCHHHHhcCCCccCCCCCCCccCCCccccchhhhhhhhhhhhhhhhhcccCCchhhHhHHHHhhhhccCCCCCCcCH
Q 043828          327 YNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTF  406 (586)
Q Consensus       327 ~~Rps~~eil~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~  406 (586)
                      .+|||+.++|+||||+...... .+..+.+...+...  .            .....+-.+.+......-+++.+|-.+.
T Consensus       439 ~kR~ta~e~L~Hpff~~~~~~~-~~~~~~~~~~~~~~--~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~e  503 (566)
T PLN03225        439 RQRISAKAALAHPYFDREGLLG-LSVMQNLRLQLFRA--T------------QQDYGEAAAWVVFLMAKSGTEKEGGFTE  503 (566)
T ss_pred             ccCCCHHHHhCCcCcCCCCccc-cccccccccccchh--h------------HHHHHHHHHHHHHHHHhcCCCCCCCccH
Confidence            9999999999999998753321 11111111110000  0            0000111234455556677888999999


Q ss_pred             HHHHHHHHhcCCCCCHHHHH--HHHHHhcCCCCCcccHhHHHh
Q 043828          407 EELKDGLNMIGQKVSDPDVK--MLMEAADVDGNGLLSCDEFVT  447 (586)
Q Consensus       407 ~el~~~l~~~~~~~~~~~~~--~~~~~~D~d~dg~i~~~eF~~  447 (586)
                      .+|+.+...-  ...+.+..  .+....+.+..|..++.+++.
T Consensus       504 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  544 (566)
T PLN03225        504 AQLQELREKE--PKKKGSAQRNALASALRLQRKGVKTVARTVD  544 (566)
T ss_pred             HHHHHhhhhc--CcchhhhhhhhHHHHHhhhhhhhhhhhhhhh
Confidence            9998877653  23333443  488889999999999999976

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=1.4e-37  Score=311.57  Aligned_cols=251  Identities=22%  Similarity=0.308  Sum_probs=200.1

Q ss_pred             cCeeecceeccCCceEEEEEEEcc----------------CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCe
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIE----------------TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNI  144 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~----------------~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnI  144 (586)
                      ++|++.+.||+|+||.||+|.+..                ++..+|+|++....  .......+.+|+.+++.+ +||||
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l-~~~~i   81 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRL-KDPNI   81 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCCc
Confidence            579999999999999999985432                34568999886542  222346788999999999 89999


Q ss_pred             eEEEEEEEeCCeEEEEEeccCCCChHHHHHhCC-----------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCce
Q 043828          145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG-----------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENF  213 (586)
Q Consensus       145 v~l~~~~~~~~~~~iv~E~~~gg~L~~~l~~~~-----------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Ni  213 (586)
                      +++++++...+.+|+||||+++++|.+++....           .+++..+..++.|++.||.|||++||+||||||+||
T Consensus        82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni  161 (296)
T cd05095          82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC  161 (296)
T ss_pred             ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence            999999999999999999999999999987642           366778999999999999999999999999999999


Q ss_pred             EeecCCCCCceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh--CCCCCCCCC
Q 043828          214 LFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC--GVPPFWAET  287 (586)
Q Consensus       214 ll~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~--g~~pf~~~~  287 (586)
                      ++   +.++.++|+|||++........   .....+++.|+|||... +.++.++|||||||++|+|++  |..||...+
T Consensus       162 li---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~  238 (296)
T cd05095         162 LV---GKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLS  238 (296)
T ss_pred             EE---cCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccC
Confidence            99   5678999999999876533221   11233467899999765 568999999999999999998  789998776


Q ss_pred             HHHHHHHHHh----CccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          288 EEGIAHAIIR----GKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       288 ~~~~~~~i~~----~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ..+.......    .......+....++..+.+|+.+||+.||.+|||+.++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         239 DEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             hHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            6555443321    0000111112356789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-38  Score=330.48  Aligned_cols=256  Identities=29%  Similarity=0.478  Sum_probs=220.6

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEE-----eC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYE-----DK  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~-----~~  154 (586)
                      .+.|+|.+.||.|.+|.||+++++++|+..|+|+.....-.    .+.+..|.++|+.++.|||++.++++|-     .+
T Consensus        18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~----deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~   93 (953)
T KOG0587|consen   18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE----EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG   93 (953)
T ss_pred             CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc----cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence            35799999999999999999999999999999998765432    2578889999999999999999999985     35


Q ss_pred             CeEEEEEeccCCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          155 DAIYLVMELCEGGELFDRIVN--KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                      +.+|||||||.||+..+++++  ..++.|..++.|++.++.|+.+||.+.++|||||-.|||+   ..++.|||+|||.+
T Consensus        94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLL---T~e~~VKLvDFGvS  170 (953)
T KOG0587|consen   94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLL---TENAEVKLVDFGVS  170 (953)
T ss_pred             CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEE---eccCcEEEeeeeee
Confidence            789999999999999998876  4579999999999999999999999999999999999999   67899999999998


Q ss_pred             cccCCC-CceecccCCccccchhhhhc------cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCC
Q 043828          233 IFFKPG-EQFCEIVGSPYYMAPEVLRR------NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD  305 (586)
Q Consensus       233 ~~~~~~-~~~~~~~gt~~y~aPE~l~~------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~  305 (586)
                      ..+... ....+.+|||.|||||++..      .|+..+|+||||++..||.-|.+|+.+..+...+-.|.+... ....
T Consensus       171 aQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPP-PkLk  249 (953)
T KOG0587|consen  171 AQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPP-PKLK  249 (953)
T ss_pred             eeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCC-cccc
Confidence            876533 34456889999999999852      377889999999999999999999988877655554444322 1122


Q ss_pred             CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       306 ~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      .|.++++++.+||..||.+|-.+||+..++|+|||++.
T Consensus       250 rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e  287 (953)
T KOG0587|consen  250 RPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE  287 (953)
T ss_pred             chhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence            35678999999999999999999999999999999983

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.3e-37  Score=304.07  Aligned_cols=246  Identities=23%  Similarity=0.333  Sum_probs=207.1

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.+.||+|+||.||+|.+. .+..+|+|.+.....    ..+.+.+|+.+++++ +||||+++++++......++
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~   78 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKL-RHDKLVQLYAVCSEEEPIYI   78 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhC-CCCCEeeeeeeeecCCceEE
Confidence            468999999999999999999864 557899999865432    346789999999999 89999999999999899999


Q ss_pred             EEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          160 VMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      ||||+++++|.+++...  ..++...+..++.|++.||.|||++|++|+||||+||++   +.++.++|+|||++.....
T Consensus        79 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili---~~~~~~~l~d~g~~~~~~~  155 (261)
T cd05034          79 VTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILV---GENLVCKIADFGLARLIED  155 (261)
T ss_pred             EEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEE---cCCCCEEECccccceeccc
Confidence            99999999999998764  368999999999999999999999999999999999999   5678999999999876543


Q ss_pred             CCc--eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          238 GEQ--FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       238 ~~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ...  .....++..|+|||.+. ..++.++||||+||++|+|++ |..||.+.+.......+..... .+  .....+..
T Consensus       156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~  232 (261)
T cd05034         156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYR-MP--RPPNCPEE  232 (261)
T ss_pred             hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-CC--CCCCCCHH
Confidence            211  11223456899999986 468889999999999999998 9999988887777777665422 11  12346889


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhc
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +.+++.+||..+|.+||+++++++
T Consensus       233 ~~~~i~~~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         233 LYDLMLQCWDKDPEERPTFEYLQS  256 (261)
T ss_pred             HHHHHHHHcccCcccCCCHHHHHH
Confidence            999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.6e-37  Score=306.87  Aligned_cols=247  Identities=23%  Similarity=0.311  Sum_probs=206.6

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCc----EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGE----TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~----~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      .+|++.+.||+|+||+||+|.+..+|.    .+|+|.+.....  ......+.+|+.+++++ +||||+++++++.. ..
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~   82 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASV-DHPHVVRLLGICLS-SQ   82 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhC-CCCCcceEEEEEec-Cc
Confidence            589999999999999999999876665    588888765432  33346788999999999 89999999999887 78


Q ss_pred             EEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      .++||||+++|+|.+++... ..+++..+..++.|++.||.|||+++|+||||||+||++   +..+.+||+|||.+...
T Consensus        83 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~---~~~~~~kL~dfg~~~~~  159 (279)
T cd05057          83 VQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLV---KTPQHVKITDFGLAKLL  159 (279)
T ss_pred             eEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEE---cCCCeEEECCCcccccc
Confidence            99999999999999998764 468999999999999999999999999999999999999   56778999999999876


Q ss_pred             CCCCceec---ccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          236 KPGEQFCE---IVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       236 ~~~~~~~~---~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      ........   ..++..|+|||.+. ..++.++|||||||++|++++ |..||.+....++...+..+.. ++.+  ...
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~--~~~  236 (279)
T cd05057         160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGER-LPQP--PIC  236 (279)
T ss_pred             cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCC-CCCC--CCC
Confidence            53332211   22356799999886 568899999999999999998 9999998888777776665432 2222  346


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +..+.+++.+||..+|..|||+.++++
T Consensus       237 ~~~~~~~~~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         237 TIDVYMVLVKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=2.5e-37  Score=302.79  Aligned_cols=246  Identities=24%  Similarity=0.414  Sum_probs=206.5

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      .+|++.+.||.|+||.||+|.+. .+..+|+|.+.....    ....+.+|+.+++++ +||||+++++++.....+|+|
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v   77 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM----SEEDFIEEAQVMMKL-SHPKLVQLYGVCTERSPICLV   77 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC----CHHHHHHHHHHHHhC-CCCCeeeEEEEEccCCceEEE
Confidence            47899999999999999999774 477899998864432    235788999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||+++++|.+++... +.+++..+..++.|++.++.|||+.+++||||||+||++   +.++.++|+|||.+.......
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i---~~~~~~~l~d~g~~~~~~~~~  154 (256)
T cd05112          78 FEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLV---GENQVVKVSDFGMTRFVLDDQ  154 (256)
T ss_pred             EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEE---cCCCeEEECCCcceeecccCc
Confidence            9999999999988764 468999999999999999999999999999999999999   567789999999987653322


Q ss_pred             c--eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          240 Q--FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       240 ~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      .  .....++..|+|||.+. +.++.++|||||||++|+|++ |..||...........+..+...+..   ...+..+.
T Consensus       155 ~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  231 (256)
T cd05112         155 YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKP---RLASQSVY  231 (256)
T ss_pred             ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCC---CCCCHHHH
Confidence            1  11233457899999986 568889999999999999998 99999888877777776654322221   23678999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcC
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +|+.+||+.+|++|||+.+++++
T Consensus       232 ~l~~~~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         232 ELMQHCWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             HHHHHHcccChhhCCCHHHHHHh
Confidence            99999999999999999999864

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-37  Score=315.04  Aligned_cols=251  Identities=25%  Similarity=0.355  Sum_probs=198.9

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC-eEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD-AIY  158 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~-~~~  158 (586)
                      .++|.-...||+|+||.||+|.. .+|..||||++.......   ...|.+|+.++.++ +|||+|+|+|||.+.+ ..+
T Consensus        74 T~~Fs~~~~ig~Ggfg~VYkG~l-~~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l-~H~Nlv~LlGyC~e~~~~~~  148 (361)
T KOG1187|consen   74 TNNFSESNLIGEGGFGTVYKGVL-SDGTVVAVKRLSSNSGQG---EREFLNEVEILSRL-RHPNLVKLLGYCLEGGEHRL  148 (361)
T ss_pred             HhCCchhcceecCCCeEEEEEEE-CCCCEEEEEEecCCCCcc---hhHHHHHHHHHhcC-CCcCcccEEEEEecCCceEE
Confidence            35788888999999999999974 455899999876543221   34599999999999 7999999999999888 599


Q ss_pred             EEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          159 LVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHEN---GVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~---~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                      ||+||+++|+|.+++....  .++|.....|+..++.||+|||..   .||||||||+|||+   +++...||+|||+|+
T Consensus       149 LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL---D~~~~aKlsDFGLa~  225 (361)
T KOG1187|consen  149 LVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL---DEDFNAKLSDFGLAK  225 (361)
T ss_pred             EEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE---CCCCCEEccCccCcc
Confidence            9999999999999998755  899999999999999999999985   39999999999999   788999999999997


Q ss_pred             ccCC-CCceecc-cCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCC---HHHHH----HHHHhCccC-C
Q 043828          234 FFKP-GEQFCEI-VGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAET---EEGIA----HAIIRGKID-F  302 (586)
Q Consensus       234 ~~~~-~~~~~~~-~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~---~~~~~----~~i~~~~~~-~  302 (586)
                      ..+. ....... .||.+|+|||+.. +..+.++|||||||+|.||++|+.|.....   .....    ..+..+.+. .
T Consensus       226 ~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~ei  305 (361)
T KOG1187|consen  226 LGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREI  305 (361)
T ss_pred             cCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhhe
Confidence            7654 3333333 8999999999986 678999999999999999999998876432   11111    122222111 1


Q ss_pred             CCCCC--CCCC-----HHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          303 ERDPW--PKVS-----KEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       303 ~~~~~--~~~~-----~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      -.+..  ...+     ..+..+..+|++.+|..||++.|+++.
T Consensus       306 iD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~  348 (361)
T KOG1187|consen  306 VDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKE  348 (361)
T ss_pred             eCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHH
Confidence            11111  1222     236678899999999999999997653

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=6e-38  Score=303.46  Aligned_cols=228  Identities=23%  Similarity=0.338  Sum_probs=188.7

Q ss_pred             CCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCCCChHH
Q 043828           92 GEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFD  171 (586)
Q Consensus        92 G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~  171 (586)
                      |.+|.||+|++..+|+.||+|++.+..        ...+|...+... .||||+++++++.....+|+||||++||+|.+
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   74 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPH-CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS   74 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhc-CCCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence            899999999999999999999986642        123344444455 69999999999999999999999999999999


Q ss_pred             HHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCceecccCCcccc
Q 043828          172 RIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM  251 (586)
Q Consensus       172 ~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~  251 (586)
                      ++.....+++..+..++.|++.||.|||++||+||||||+||++   +..+.++++|||.+......  .....++..|+
T Consensus        75 ~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~df~~~~~~~~~--~~~~~~~~~y~  149 (237)
T cd05576          75 HISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILL---DDRGHIQLTYFSRWSEVEDS--CDGEAVENMYC  149 (237)
T ss_pred             HHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE---cCCCCEEEecccchhccccc--cccCCcCcccc
Confidence            99887789999999999999999999999999999999999999   56788999999987655432  23345677899


Q ss_pred             chhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCC
Q 043828          252 APEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRL  330 (586)
Q Consensus       252 aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rp  330 (586)
                      |||.+. ..++.++||||+||++|+|++|..||.......      .....+..  .+.+++.+++||.+||+.||.+||
T Consensus       150 aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~------~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~R~  221 (237)
T cd05576         150 APEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI------NTHTTLNI--PEWVSEEARSLLQQLLQFNPTERL  221 (237)
T ss_pred             CCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc------ccccccCC--cccCCHHHHHHHHHHccCCHHHhc
Confidence            999886 458889999999999999999999875432210      01111111  135789999999999999999999


Q ss_pred             CH-----HHHhcCCCc
Q 043828          331 TL-----EEVLENPWI  341 (586)
Q Consensus       331 s~-----~eil~hp~~  341 (586)
                      ++     +++++||||
T Consensus       222 ~~~~~~~~~~~~h~~~  237 (237)
T cd05576         222 GAGVAGVEDIKSHPFF  237 (237)
T ss_pred             CCCccchHHHHcCCCC
Confidence            85     999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-39  Score=311.15  Aligned_cols=267  Identities=28%  Similarity=0.472  Sum_probs=222.4

Q ss_pred             CCCCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccc-cC---ChhcHHHHHHHHHHHHhCCCCCCeeEEEEE
Q 043828           75 AEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEK-LK---TEIDIDDVRREVEIMRHLPKHPNIVTYKEA  150 (586)
Q Consensus        75 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~-~~---~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~  150 (586)
                      ....+.++|-++..||+|||+.||+|.+....+.||+|+-.... +.   .+...+..-+|..|.+.| +||.||++|++
T Consensus       457 DHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL-DHpRIVKlYDy  535 (775)
T KOG1151|consen  457 DHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL-DHPRIVKLYDY  535 (775)
T ss_pred             cCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc-Ccceeeeeeee
Confidence            34456678999999999999999999999999999999864332 11   122234566899999999 99999999999


Q ss_pred             EE-eCCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc--CceeccCCCCceEeecCCCCCceEEe
Q 043828          151 YE-DKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN--GVMHRDLKPENFLFADGSENSQLKAI  227 (586)
Q Consensus       151 ~~-~~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~ivHrDlkp~Nill~~~~~~~~vkl~  227 (586)
                      |. +.+.+|-|+|||+|.+|.-+|..+..+++..++.|+.||+.||.||.+.  .|||-||||.|||+.++...|.+||.
T Consensus       536 fslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKIT  615 (775)
T KOG1151|consen  536 FSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKIT  615 (775)
T ss_pred             eeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEee
Confidence            96 5578999999999999999999999999999999999999999999976  69999999999999988899999999


Q ss_pred             ecccccccCCCC--------ceecccCCccccchhhhh-c----cCCCcchHHHHHHHHHHHhhCCCCCCCCCH-HHHHH
Q 043828          228 DFGLSIFFKPGE--------QFCEIVGSPYYMAPEVLR-R----NYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAH  293 (586)
Q Consensus       228 Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~l~-~----~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~  293 (586)
                      |||+++.+....        -.....||.+|++||.+- +    ..+.++||||+|||+|.++.|+.||..... ..+++
T Consensus       616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILq  695 (775)
T KOG1151|consen  616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQ  695 (775)
T ss_pred             ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHh
Confidence            999999886432        123467999999999873 2    368899999999999999999999976433 23322


Q ss_pred             H--H-HhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          294 A--I-IRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       294 ~--i-~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .  | ......||..  |.+++++++||++||..--+.|....++..||||...
T Consensus       696 eNTIlkAtEVqFP~K--PvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh  747 (775)
T KOG1151|consen  696 ENTILKATEVQFPPK--PVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPH  747 (775)
T ss_pred             hhchhcceeccCCCC--CccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccch
Confidence            1  2 2234455554  5799999999999999999999999999999999863

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=3.2e-37  Score=306.37  Aligned_cols=249  Identities=20%  Similarity=0.274  Sum_probs=205.4

Q ss_pred             ccCeeecceeccCCceEEEEEEEcc----CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe-C
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIE----TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED-K  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~----~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~-~  154 (586)
                      .++|++.+.||+|+||.||+|.+..    ++..+++|++....  .......+.+|+.+++++ +||||+++++++.. +
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~   81 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA--SEIQVTLLLQESCLLYGL-SHQNILPILHVCIEDG   81 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCC
Confidence            3589999999999999999998865    35788888875432  233456788999999999 99999999998765 5


Q ss_pred             CeEEEEEeccCCCChHHHHHhC--------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEE
Q 043828          155 DAIYLVMELCEGGELFDRIVNK--------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKA  226 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~--------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl  226 (586)
                      ...++++||+++++|.+++...        ..+++..+..++.|++.||.|||+++++||||||+||++   ...+.+||
T Consensus        82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~---~~~~~~kl  158 (280)
T cd05043          82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVI---DEELQVKI  158 (280)
T ss_pred             CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEE---cCCCcEEE
Confidence            7789999999999999988653        458899999999999999999999999999999999999   56689999


Q ss_pred             eecccccccCCCCce---ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccC
Q 043828          227 IDFGLSIFFKPGEQF---CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKID  301 (586)
Q Consensus       227 ~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~  301 (586)
                      +|||+++.+.+....   ....++..|+|||++. ..++.++|||||||++|++++ |..||...+.......+..+ ..
T Consensus       159 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~  237 (280)
T cd05043         159 TDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDG-YR  237 (280)
T ss_pred             CCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcC-CC
Confidence            999999865433221   1234567899999986 458899999999999999998 99999887777666555543 22


Q ss_pred             CCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       302 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +.  ....++..+.+++.+||..||++|||+.++++
T Consensus       238 ~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         238 LA--QPINCPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             CC--CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            22  22457889999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=3.6e-37  Score=304.11  Aligned_cols=252  Identities=27%  Similarity=0.505  Sum_probs=210.0

Q ss_pred             CeeecceeccCCceEEEEEEEcc-CCcEEEEEEeecccc-------CChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe
Q 043828           82 KYTFGKELGRGEFGITHQCFEIE-TGETYACKKIAKEKL-------KTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED  153 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~-~~~~~avK~i~~~~~-------~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~  153 (586)
                      .|++.+.||+|+||.||+|.+.. +++.+|+|.+.....       ........+..|+.++.+..+||||+++++++..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            48889999999999999999877 678999998864321       1223345677888888764489999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeecCCCCCceEEee
Q 043828          154 KDAIYLVMELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHE-NGVMHRDLKPENFLFADGSENSQLKAID  228 (586)
Q Consensus       154 ~~~~~iv~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivHrDlkp~Nill~~~~~~~~vkl~D  228 (586)
                      ++.+++||||++|++|.+++..    ...+++..++.++.|++.+|.|||+ .+++|+||+|+||++   +..+.++|+|
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~---~~~~~~~l~d  157 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML---GEDDKVTITD  157 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEE---CCCCcEEEec
Confidence            9999999999999999888743    3468999999999999999999996 789999999999999   5678999999


Q ss_pred             cccccccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCC
Q 043828          229 FGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW  307 (586)
Q Consensus       229 fg~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  307 (586)
                      ||.+.............|+..|+|||.+.+ .++.++||||||+++|+|++|.+||...........+........  ..
T Consensus       158 fg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~  235 (269)
T cd08528         158 FGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPL--PE  235 (269)
T ss_pred             ccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcC--Cc
Confidence            999987655444445678999999999864 588899999999999999999999988777666666655443321  22


Q ss_pred             CCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       308 ~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ..++..+.++|.+||+.||++||++.|+..+
T Consensus       236 ~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         236 GMYSEDVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             ccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence            3578999999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=5e-37  Score=299.60  Aligned_cols=241  Identities=25%  Similarity=0.352  Sum_probs=199.5

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG  166 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~g  166 (586)
                      +.||+|+||.||+|.. .++..+|+|++....  .......+.+|+.+++.+ +||||+++++++...+..++||||+++
T Consensus         1 ~~ig~g~~g~vy~~~~-~~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~   76 (250)
T cd05085           1 ELLGKGNFGEVFKGTL-KDKTPVAVKTCKEDL--PQELKIKFLSEARILKQY-DHPNIVKLIGVCTQRQPIYIVMELVPG   76 (250)
T ss_pred             CccCCCCCceEEEEEe-cCCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhC-CCCCcCeEEEEEecCCccEEEEECCCC
Confidence            3699999999999975 468899999886543  222234688899999999 899999999999999999999999999


Q ss_pred             CChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCce--ec
Q 043828          167 GELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF--CE  243 (586)
Q Consensus       167 g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~--~~  243 (586)
                      ++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||++   +.++.+||+|||++.........  ..
T Consensus        77 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili---~~~~~~~l~d~g~~~~~~~~~~~~~~~  153 (250)
T cd05085          77 GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSRQEDDGIYSSSGL  153 (250)
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEE---cCCCeEEECCCccceeccccccccCCC
Confidence            9999988753 457899999999999999999999999999999999999   56778999999998754332211  11


Q ss_pred             ccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHc
Q 043828          244 IVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNM  321 (586)
Q Consensus       244 ~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~  321 (586)
                      ..+++.|+|||++. +.++.++|||||||++|++++ |..||...........+..+..   ......++..+.+++.+|
T Consensus       154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~  230 (250)
T cd05085         154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYR---MSCPQKCPDDVYKVMQRC  230 (250)
T ss_pred             CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCCHHHHHHHHHH
Confidence            23456799999986 468889999999999999998 9999988877766666554422   122245789999999999


Q ss_pred             cCCCCCCCCCHHHHhc
Q 043828          322 LDPNPYNRLTLEEVLE  337 (586)
Q Consensus       322 L~~dp~~Rps~~eil~  337 (586)
                      |..+|++|||+.++++
T Consensus       231 l~~~p~~Rp~~~~l~~  246 (250)
T cd05085         231 WDYKPENRPKFSELQK  246 (250)
T ss_pred             cccCcccCCCHHHHHH
Confidence            9999999999999976

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=4.2e-37  Score=300.33  Aligned_cols=241  Identities=26%  Similarity=0.340  Sum_probs=200.9

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCC
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG  166 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~g  166 (586)
                      ++||.|+||.||+|.+.. ++.||+|.+......  .....+.+|+.+++++ +||||+++++++......|+||||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~   76 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP--DLKRKFLQEAEILKQY-DHPNIVKLIGVCVQKQPIYIVMELVPG   76 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCH--HHHHHHHHHHHHHHhC-CCCCeEEEEEEEecCCCeEEEEEcCCC
Confidence            469999999999999877 999999988765432  2346788999999999 899999999999999999999999999


Q ss_pred             CChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCce---e
Q 043828          167 GELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF---C  242 (586)
Q Consensus       167 g~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~---~  242 (586)
                      ++|.+++.. ...+++..+..++.+++.+|.|||+++++||||+|+||++   +.++.++|+|||++.........   .
T Consensus        77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili---~~~~~~~l~d~g~~~~~~~~~~~~~~~  153 (251)
T cd05041          77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLV---GENNVLKISDFGMSREEEGGIYTVSDG  153 (251)
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEE---cCCCcEEEeeccccccccCCcceeccc
Confidence            999999865 3468899999999999999999999999999999999999   56789999999998765422111   1


Q ss_pred             cccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHH
Q 043828          243 EIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN  320 (586)
Q Consensus       243 ~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~  320 (586)
                      ...++..|+|||.+. +.++.++|||||||++|+|++ |..||...........+.... ..+  ....++..+.+++.+
T Consensus       154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~li~~  230 (251)
T cd05041         154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY-RMP--APQLCPEEIYRLMLQ  230 (251)
T ss_pred             cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC-CCC--CCccCCHHHHHHHHH
Confidence            122356799999886 468899999999999999999 899998877766666554432 111  224578899999999


Q ss_pred             ccCCCCCCCCCHHHHhc
Q 043828          321 MLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       321 ~L~~dp~~Rps~~eil~  337 (586)
                      ||..+|.+|||+.++++
T Consensus       231 ~l~~~p~~Rp~~~ell~  247 (251)
T cd05041         231 CWAYDPENRPSFSEIYN  247 (251)
T ss_pred             HhccChhhCcCHHHHHH
Confidence            99999999999999986

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=4.1e-37  Score=303.66  Aligned_cols=244  Identities=22%  Similarity=0.258  Sum_probs=192.5

Q ss_pred             ceeccCCceEEEEEEEc--cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEecc
Q 043828           87 KELGRGEFGITHQCFEI--ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELC  164 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~  164 (586)
                      +.||+|+||.||+|...  .++..+|+|.+.....  ......+.+|+.+++++ +||||+++++++.+...+++||||+
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~   77 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS--VQEQMKFLEEAQPYRSL-QHSNLLQCLGQCTEVTPYLLVMEFC   77 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCCcEEEEECC
Confidence            36899999999999754  3456799998865432  22234688899999999 8999999999999999999999999


Q ss_pred             CCCChHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          165 EGGELFDRIVNKG-----HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       165 ~gg~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      ++|+|.+++....     .+++..+..++.|++.||.|||+.+++||||||+||++   +..+.+||+|||++.......
T Consensus        78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~---~~~~~~kL~dfg~~~~~~~~~  154 (269)
T cd05087          78 PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLL---TADLTVKIGDYGLSHNKYKED  154 (269)
T ss_pred             CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE---cCCCcEEECCccccccccCcc
Confidence            9999999986532     35677788899999999999999999999999999999   567889999999986543222


Q ss_pred             c---eecccCCccccchhhhhc--------cCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHH-hCccCCCCCC
Q 043828          240 Q---FCEIVGSPYYMAPEVLRR--------NYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAII-RGKIDFERDP  306 (586)
Q Consensus       240 ~---~~~~~gt~~y~aPE~l~~--------~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~-~~~~~~~~~~  306 (586)
                      .   .....|++.|+|||++..        .++.++|||||||++|+|++ |..||............. ......+.+.
T Consensus       155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  234 (269)
T cd05087         155 YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPR  234 (269)
T ss_pred             eeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCc
Confidence            1   123457788999999853        25789999999999999996 999998766655443322 2223333322


Q ss_pred             C-CCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          307 W-PKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       307 ~-~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      . ...+..+.+++.+|+ .+|++|||+++|+.
T Consensus       235 ~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         235 LKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             cCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence            2 246788999999999 68999999999974

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=3.9e-37  Score=303.99  Aligned_cols=248  Identities=23%  Similarity=0.330  Sum_probs=204.0

Q ss_pred             cCeeecceeccCCceEEEEEEEccC---CcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIET---GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .+|.+.+.||+|+||.||+|.+...   ...+|+|.+.....  ....+.+.+|+.+++++ +||||+++++++.+ ...
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~-~~~   81 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS--PSVREKFLQEAYIMRQF-DHPHIVKLIGVITE-NPV   81 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC--HHHHHHHHHHHHHHHhC-CCCchhceeEEEcC-CCc
Confidence            4689999999999999999987544   34688888754431  22346788999999999 89999999999876 557


Q ss_pred             EEEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      |+||||+++++|.+++.... .+++..+..++.|++.||.|||+.+++||||||+||++   +..+.++|+|||++....
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili---~~~~~~~l~d~g~~~~~~  158 (270)
T cd05056          82 WIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLV---SSPDCVKLGDFGLSRYLE  158 (270)
T ss_pred             EEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEE---ecCCCeEEccCceeeecc
Confidence            89999999999999997643 58999999999999999999999999999999999999   566789999999987654


Q ss_pred             CCCcee--cccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCH
Q 043828          237 PGEQFC--EIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       237 ~~~~~~--~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      ......  ...+++.|+|||.+. ..++.++|||||||++|+|++ |..||...+..+....+.++...   ...+.++.
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~  235 (270)
T cd05056         159 DESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL---PMPPNCPP  235 (270)
T ss_pred             cccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC---CCCCCCCH
Confidence            332211  223456799999885 468899999999999999986 99999888777766666554322   12346789


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .+.++|.+||..+|.+|||+.+++..
T Consensus       236 ~~~~li~~~l~~~P~~Rpt~~~~~~~  261 (270)
T cd05056         236 TLYSLMTKCWAYDPSKRPRFTELKAQ  261 (270)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=4.1e-37  Score=303.71  Aligned_cols=244  Identities=21%  Similarity=0.277  Sum_probs=191.7

Q ss_pred             ceeccCCceEEEEEEEcc--CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEecc
Q 043828           87 KELGRGEFGITHQCFEIE--TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELC  164 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~--~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~  164 (586)
                      +.||+|+||.||+|....  ....+|+|.+....  .......+.+|+.+++.+ +||||+++++++.....+|+||||+
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l-~h~nii~~~~~~~~~~~~~lv~e~~   77 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYREL-NHPNVLQCLGQCIESIPYLLVLEFC   77 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhC-CCCCcceEEEEECCCCceEEEEEeC
Confidence            369999999999996432  34567888765432  222335678899999999 8999999999999999999999999


Q ss_pred             CCCChHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          165 EGGELFDRIVNKG-----HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       165 ~gg~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      ++|+|.+++....     ..++..+..++.||+.||.|||+++|+||||||+||++   +.++.+||+|||++.......
T Consensus        78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---~~~~~~kl~dfg~~~~~~~~~  154 (269)
T cd05042          78 PLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQL---TADLSVKIGDYGLALEQYPED  154 (269)
T ss_pred             CCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEe---cCCCcEEEeccccccccccch
Confidence            9999999987643     24677888999999999999999999999999999999   567899999999986543221


Q ss_pred             c---eecccCCccccchhhhhc--------cCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHh-CccCCCCCC
Q 043828          240 Q---FCEIVGSPYYMAPEVLRR--------NYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIR-GKIDFERDP  306 (586)
Q Consensus       240 ~---~~~~~gt~~y~aPE~l~~--------~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~-~~~~~~~~~  306 (586)
                      .   .....+++.|+|||++..        .++.++|||||||++|+|++ |..||...........+.. ....++.+.
T Consensus       155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  234 (269)
T cd05042         155 YYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQ  234 (269)
T ss_pred             heeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCc
Confidence            1   122345678999999742        36779999999999999999 7889987776655554433 333333322


Q ss_pred             -CCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          307 -WPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       307 -~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                       ...++..+.+++..|+ .||.+|||++++++
T Consensus       235 ~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         235 LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             ccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence             2357788999999998 59999999999986

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=5.5e-38  Score=307.94  Aligned_cols=240  Identities=18%  Similarity=0.262  Sum_probs=191.4

Q ss_pred             ceeccCCceEEEEEEEccCCc-------EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           87 KELGRGEFGITHQCFEIETGE-------TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~-------~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +.||.|+||.||+|.+...+.       .+|+|.+....   ....+.+.+|+.+++.+ +||||+++++++..+...++
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~l   76 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQL-SHKHLVLNYGVCVCGDESIM   76 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhC-CCCChhheeeEEEeCCCcEE
Confidence            469999999999998765443       37777765432   22345678899999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCC-----CCceEEeeccccc
Q 043828          160 VMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSE-----NSQLKAIDFGLSI  233 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~-----~~~vkl~Dfg~a~  233 (586)
                      ||||+++|+|..++..++ .+++..+..++.||+.||.|||++||+||||||+||+++.+..     .+.++++|||++.
T Consensus        77 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~  156 (258)
T cd05078          77 VQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI  156 (258)
T ss_pred             EEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence            999999999999987644 5899999999999999999999999999999999999964211     1348999999987


Q ss_pred             ccCCCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCC-CCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          234 FFKPGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGV-PPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       234 ~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~-~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      .....   ....+++.|+|||++.+  .++.++|||||||++|+|++|. +||...+...... +......++.    ..
T Consensus       157 ~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-~~~~~~~~~~----~~  228 (258)
T cd05078         157 TVLPK---EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-FYEDRHQLPA----PK  228 (258)
T ss_pred             ccCCc---hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-HHHccccCCC----CC
Confidence            65432   23467889999999864  4788999999999999999984 6665555444332 2333333322    35


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +..+.+||.+||+.||++|||++++++.
T Consensus       229 ~~~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         229 WTELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             cHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence            5789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=2.7e-37  Score=302.27  Aligned_cols=240  Identities=25%  Similarity=0.400  Sum_probs=202.4

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++.+.||+|+||.||++.  .+++.+|+|.+....     ....+.+|+.+++.+ +||||+++++++..+ ..++|
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~-~~~~v   76 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV-----TAQAFLEETAVMTKL-HHKNLVRLLGVILHN-GLYIV   76 (254)
T ss_pred             HHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc-----hHHHHHHHHHHHHhC-CCCCcCeEEEEEcCC-CcEEE
Confidence            579999999999999999985  478899999985432     235788999999999 899999999998764 47999


Q ss_pred             EeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          161 MELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      |||+++++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+||++   +.++.+||+|||++......
T Consensus        77 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili---~~~~~~kl~Dfg~~~~~~~~  153 (254)
T cd05083          77 MELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILV---SEDGVAKVSDFGLARVGSMG  153 (254)
T ss_pred             EECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEE---cCCCcEEECCCccceecccc
Confidence            99999999999987643  47899999999999999999999999999999999999   56788999999998764322


Q ss_pred             CceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          239 EQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                        ......+..|+|||.+. +.++.++|+|||||++|+|++ |.+||...+.......+..+.. .  .+...++..+.+
T Consensus       154 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~  228 (254)
T cd05083         154 --VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYR-M--EPPEGCPADVYV  228 (254)
T ss_pred             --CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCC-C--CCCCcCCHHHHH
Confidence              12233457899999886 468889999999999999997 9999988888777766655422 2  223467899999


Q ss_pred             HHHHccCCCCCCCCCHHHHhc
Q 043828          317 LVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~  337 (586)
                      ++.+||+.+|.+||++++++.
T Consensus       229 li~~~l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         229 LMTSCWETEPKKRPSFHKLRE  249 (254)
T ss_pred             HHHHHcCCChhhCcCHHHHHH
Confidence            999999999999999999986

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=2.2e-37  Score=308.18  Aligned_cols=248  Identities=26%  Similarity=0.410  Sum_probs=198.5

Q ss_pred             CeeecceeccCCceEEEEEEE----ccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC--C
Q 043828           82 KYTFGKELGRGEFGITHQCFE----IETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK--D  155 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~----~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~--~  155 (586)
                      -|++++.||+|+||.||+|..    ..++..||+|.+....  .......+.+|+.+++.+ +||||+++++++...  .
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   81 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGN   81 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCC
Confidence            478999999999999999974    4568899999986442  223346789999999999 899999999998875  6


Q ss_pred             eEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      .+++||||++|++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++   +.++.++|+|||++..
T Consensus        82 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~---~~~~~~~l~dfg~~~~  158 (284)
T cd05079          82 GIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV---ESEHQVKIGDFGLTKA  158 (284)
T ss_pred             ceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEE---cCCCCEEECCCccccc
Confidence            789999999999999998664 358999999999999999999999999999999999999   5677899999999886


Q ss_pred             cCCCCce----ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCH---------------HHHHHH
Q 043828          235 FKPGEQF----CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETE---------------EGIAHA  294 (586)
Q Consensus       235 ~~~~~~~----~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------------~~~~~~  294 (586)
                      .......    ....++..|+|||++. ..++.++|||||||++|+|+++..|+.....               ......
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd05079         159 IETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV  238 (284)
T ss_pred             cccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH
Confidence            5433221    2345677899999875 4688999999999999999998776532111               111111


Q ss_pred             HHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          295 IIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       295 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +..+ ...  +.+..++..+.+||.+||+.+|.+|||+++++++
T Consensus       239 ~~~~-~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         239 LEEG-KRL--PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             HHcC-ccC--CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            1222 111  2234688999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-37  Score=337.28  Aligned_cols=248  Identities=22%  Similarity=0.397  Sum_probs=212.5

Q ss_pred             cCeeecceeccCCceEEEEEEEccC-C----cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIET-G----ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~-~----~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      ...++.+.||+|+||.||.|..... |    ..||+|.+.+.  .+......|.+|..+|+.+ +|||||++++++-+..
T Consensus       692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f-~HpNiv~liGv~l~~~  768 (1025)
T KOG1095|consen  692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKF-DHPNIVSLIGVCLDSG  768 (1025)
T ss_pred             hheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcC-CCcceeeEEEeecCCC
Confidence            4678889999999999999976433 2    24888887654  3556678999999999999 9999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEee
Q 043828          156 AIYLVMELCEGGELFDRIVNK-------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID  228 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~D  228 (586)
                      ..+|++|||.||+|..+|++.       ..++......++.+|++|+.||+++++|||||-..|+|+   +....|||+|
T Consensus       769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL---~~~r~VKIaD  845 (1025)
T KOG1095|consen  769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLL---DERRVVKIAD  845 (1025)
T ss_pred             CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheee---cccCcEEEcc
Confidence            999999999999999999875       248899999999999999999999999999999999999   6779999999


Q ss_pred             cccccccCCCCceec---ccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCC
Q 043828          229 FGLSIFFKPGEQFCE---IVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFE  303 (586)
Q Consensus       229 fg~a~~~~~~~~~~~---~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~  303 (586)
                      ||+|+.+...+.+..   ..-...|||||.+. +.++.++|||||||+|||++| |..||.+.+..++..-..++. .++
T Consensus       846 FGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-RL~  924 (1025)
T KOG1095|consen  846 FGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-RLD  924 (1025)
T ss_pred             cchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-ccC
Confidence            999995543332221   12235799999997 679999999999999999998 899999999999888666665 443


Q ss_pred             CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       304 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .+  +.++..+.++|..||+.+|++||++..|++
T Consensus       925 ~P--~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  925 PP--SYCPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             CC--CCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence            33  578899999999999999999999999997

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=5e-37  Score=301.47  Aligned_cols=246  Identities=21%  Similarity=0.322  Sum_probs=204.0

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++.+.||+|+||.||++... .+..+|+|.+....    ...+.+.+|+.+++.+ +|+||+++++.+.. ...|
T Consensus         4 ~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~----~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~-~~~~   76 (260)
T cd05073           4 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS----MSVEAFLAEANVMKTL-QHDKLVKLHAVVTK-EPIY   76 (260)
T ss_pred             cccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh----hHHHHHHHHHHHHHhc-CCCCcceEEEEEcC-CCeE
Confidence            3578999999999999999999753 45679999876432    2346788999999999 89999999999887 7789


Q ss_pred             EEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          159 LVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      ++|||+++++|.+++...  ..++...+..++.|++.||.|||++|++||||||+||++   +..+.+||+|||.+....
T Consensus        77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i---~~~~~~~l~d~~~~~~~~  153 (260)
T cd05073          77 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIE  153 (260)
T ss_pred             EEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE---cCCCcEEECCCcceeecc
Confidence            999999999999998763  457888899999999999999999999999999999999   567899999999987654


Q ss_pred             CCCce--ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCH
Q 043828          237 PGEQF--CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       237 ~~~~~--~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      .....  ....++..|+|||++. +.++.++|||||||++|++++ |..||...+.......+..... .  +.....+.
T Consensus       154 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~  230 (260)
T cd05073         154 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR-M--PRPENCPE  230 (260)
T ss_pred             CCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCC-C--CCcccCCH
Confidence            32211  1234567799999986 457889999999999999998 9999988877776666554422 2  22346789


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ++.+++.+||..+|++||++.+++.
T Consensus       231 ~~~~~i~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         231 ELYNIMMRCWKNRPEERPTFEYIQS  255 (260)
T ss_pred             HHHHHHHHHcccCcccCcCHHHHHH
Confidence            9999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=4.1e-37  Score=304.38  Aligned_cols=239  Identities=18%  Similarity=0.171  Sum_probs=190.3

Q ss_pred             eeccCCceEEEEEEEccC------------------------CcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCC
Q 043828           88 ELGRGEFGITHQCFEIET------------------------GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN  143 (586)
Q Consensus        88 ~lG~G~~g~V~~~~~~~~------------------------~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpn  143 (586)
                      +||+|+||.||+|....+                        ...+|+|++....   ......+.+|+.+++.+ +|||
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l-~h~n   77 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQV-SHIH   77 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcC-CCCC
Confidence            699999999999975322                        1357888775432   12235677889999999 8999


Q ss_pred             eeEEEEEEEeCCeEEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecC----
Q 043828          144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADG----  218 (586)
Q Consensus       144 Iv~l~~~~~~~~~~~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~----  218 (586)
                      |+++++++......|+||||+++|+|..++.. .+.+++..+..++.||+.||.|||+++|+||||||+||++...    
T Consensus        78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~  157 (274)
T cd05076          78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE  157 (274)
T ss_pred             eeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence            99999999999999999999999999988865 5678999999999999999999999999999999999999532    


Q ss_pred             CCCCceEEeecccccccCCCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHH-hhCCCCCCCCCHHHHHHHH
Q 043828          219 SENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYIL-LCGVPPFWAETEEGIAHAI  295 (586)
Q Consensus       219 ~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~l-l~g~~pf~~~~~~~~~~~i  295 (586)
                      .....+|++|||++......   ....++..|+|||.+.+  .++.++|||||||++|+| ++|..||...........+
T Consensus       158 ~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~  234 (274)
T cd05076         158 GTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFY  234 (274)
T ss_pred             CccceeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHH
Confidence            12345899999987643222   23457888999998853  578999999999999998 4799999877665543332


Q ss_pred             HhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          296 IRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      . .....+.    ..++.+.++|.+||+.+|.+|||+.++|++
T Consensus       235 ~-~~~~~~~----~~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         235 E-KKHRLPE----PSCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             H-hccCCCC----CCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            2 2222222    245789999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=4.2e-37  Score=302.24  Aligned_cols=240  Identities=19%  Similarity=0.196  Sum_probs=189.3

Q ss_pred             ceeccCCceEEEEEEEcc------------CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           87 KELGRGEFGITHQCFEIE------------TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~------------~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      +.||+|+||.||+|....            ....+++|++....   ......+..|+.+++.+ +||||+++++++..+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~l~~l-~hp~iv~~~~~~~~~   76 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---RDISLAFFETASMMRQV-SHKHIVLLYGVCVRD   76 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---hhHHHHHHHHHHHHHhC-CCCCEeeEEEEEecC
Confidence            468999999999997432            22357888765432   22335678889999999 899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCC----CCCceEEeec
Q 043828          155 DAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS----ENSQLKAIDF  229 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~----~~~~vkl~Df  229 (586)
                      ...++||||+++++|..++.. ...+++..+..++.||+.||.|||+++|+||||||+|||+....    ....++++||
T Consensus        77 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~  156 (262)
T cd05077          77 VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP  156 (262)
T ss_pred             CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence            999999999999999888765 45689999999999999999999999999999999999995321    1123899999


Q ss_pred             ccccccCCCCceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHh-hCCCCCCCCCHHHHHHHHHhCccCCCCCC
Q 043828          230 GLSIFFKPGEQFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILL-CGVPPFWAETEEGIAHAIIRGKIDFERDP  306 (586)
Q Consensus       230 g~a~~~~~~~~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll-~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  306 (586)
                      |++......   ....++..|+|||.+.  ..++.++|||||||++|+|+ +|..||......+.. .+........   
T Consensus       157 g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~~~~~~~---  229 (262)
T cd05077         157 GIPITVLSR---QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYEGQCMLV---  229 (262)
T ss_pred             CCCccccCc---ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHhcCccCC---
Confidence            998654322   2346788999999885  45888999999999999997 588888765544332 2222222221   


Q ss_pred             CCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       307 ~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                       ...+.++.+||.+||+.||.+||++.+|+++
T Consensus       230 -~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         230 -TPSCKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             -CCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence             2346789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=1.1e-36  Score=303.06  Aligned_cols=248  Identities=26%  Similarity=0.396  Sum_probs=196.5

Q ss_pred             cCeeecceeccCCceEEEEEEE----ccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe--C
Q 043828           81 DKYTFGKELGRGEFGITHQCFE----IETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED--K  154 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~----~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~--~  154 (586)
                      .+|++.+.||+|+||.||+|..    ..++..||+|++....   ......+.+|+.+++.+ +||||+++++++..  .
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~   79 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST---AEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGR   79 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC---HHHHHHHHHHHHHHHhC-CCCCeeEEEEEEccCCC
Confidence            4799999999999999999973    4578899999986542   23346788999999999 89999999998653  3


Q ss_pred             CeEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          155 DAIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                      ..+++||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||++.
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili---~~~~~~~l~dfg~~~  156 (284)
T cd05081          80 RNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILV---ESENRVKIGDFGLTK  156 (284)
T ss_pred             CceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEE---CCCCeEEECCCcccc
Confidence            5789999999999999998764 468999999999999999999999999999999999999   567889999999998


Q ss_pred             ccCCCCce----ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHH---------------HHH
Q 043828          234 FFKPGEQF----CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEG---------------IAH  293 (586)
Q Consensus       234 ~~~~~~~~----~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---------------~~~  293 (586)
                      ........    ....++..|+|||++. ..++.++|||||||++|+|++|..|+.......               ...
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T cd05081         157 VLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLI  236 (284)
T ss_pred             cccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHH
Confidence            76433221    1122345699999986 468889999999999999999877764332110               011


Q ss_pred             HHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          294 AIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       294 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .+......++  ....++..+.+||.+||..+|++|||+.++++
T Consensus       237 ~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         237 ELLKNNGRLP--APPGCPAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             HHHhcCCcCC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            1112222221  22457889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=5.4e-37  Score=300.92  Aligned_cols=237  Identities=18%  Similarity=0.186  Sum_probs=189.7

Q ss_pred             ceeccCCceEEEEEEEccCC----------cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           87 KELGRGEFGITHQCFEIETG----------ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~----------~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      +.||+|+||.||+|.+..++          ..+++|.+.....    ....+.+|+.+++.+ +||||+++++++.. ..
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~   74 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR----DSLAFFETASLMSQL-SHKHLVKLYGVCVR-DE   74 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh----hHHHHHHHHHHHHcC-CCcchhheeeEEec-CC
Confidence            46999999999999987766          3467776543321    146788999999999 89999999999887 77


Q ss_pred             EEEEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCC----CCCceEEeeccc
Q 043828          157 IYLVMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS----ENSQLKAIDFGL  231 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~----~~~~vkl~Dfg~  231 (586)
                      .++||||+++|+|.+++.... .++...+..++.||+.||.|||++||+||||||+||+++...    ....+||+|||+
T Consensus        75 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~  154 (259)
T cd05037          75 NIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI  154 (259)
T ss_pred             cEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence            899999999999999998765 789999999999999999999999999999999999995321    112799999999


Q ss_pred             ccccCCCCceecccCCccccchhhhhc---cCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCC
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLRR---NYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPW  307 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~~---~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  307 (586)
                      +.....   .....++..|+|||++..   .++.++|||||||++|+|++ |..||...+........... ...+.   
T Consensus       155 a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~-~~~~~---  227 (259)
T cd05037         155 PITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQ-HRLPM---  227 (259)
T ss_pred             cccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcC-CCCCC---
Confidence            886543   223456788999999864   47889999999999999999 58888766544333332211 11111   


Q ss_pred             CCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       308 ~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                       .....+.++|.+||..+|.+|||+.++++
T Consensus       228 -~~~~~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         228 -PDCAELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             -CCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence             12378999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=1.7e-36  Score=298.10  Aligned_cols=243  Identities=22%  Similarity=0.343  Sum_probs=193.4

Q ss_pred             ceeccCCceEEEEEEEcc---CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEE-eCCeEEEEEe
Q 043828           87 KELGRGEFGITHQCFEIE---TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYE-DKDAIYLVME  162 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~---~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~-~~~~~~iv~E  162 (586)
                      +.||+|+||.||+|.+..   .+..+|+|.+....  .....+.+.+|+.+++.+ +||||+++++++. .++..++|||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~e   77 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT--DLEEVEQFLKEGIIMKDF-SHPNVLSLLGICLPSEGSPLVVLP   77 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccC--CHHHHHHHHHHHHHHccC-CCCCcceEEEEeecCCCCcEEEEe
Confidence            468999999999998653   34579999875322  223356788899999999 8999999999765 4566899999


Q ss_pred             ccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC--
Q 043828          163 LCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE--  239 (586)
Q Consensus       163 ~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~--  239 (586)
                      |+.+++|.+++... ...++..+..++.|++.||.|||+.+|+||||||+|||+   +..+.+||+|||++.......  
T Consensus        78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili---~~~~~~kl~dfg~~~~~~~~~~~  154 (262)
T cd05058          78 YMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCML---DESFTVKVADFGLARDIYDKEYY  154 (262)
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEE---cCCCcEEECCccccccccCCcce
Confidence            99999999998764 346778888999999999999999999999999999999   567789999999987543221  


Q ss_pred             ---ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          240 ---QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       240 ---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                         ......+++.|+|||.+. ..++.++|||||||++|+|++ |.+||...+.......+..+.... .  ...++..+
T Consensus       155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~  231 (262)
T cd05058         155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLL-Q--PEYCPDPL  231 (262)
T ss_pred             eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCC-C--CCcCCHHH
Confidence               112334577899999885 468889999999999999999 567777766666665555443211 1  13467899


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .+++.+||..+|++||++.+++..
T Consensus       232 ~~li~~cl~~~p~~Rp~~~~il~~  255 (262)
T cd05058         232 YEVMLSCWHPKPEMRPTFSELVSR  255 (262)
T ss_pred             HHHHHHHcCCChhhCCCHHHHHHH
Confidence            999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=1.2e-36  Score=305.67  Aligned_cols=248  Identities=23%  Similarity=0.289  Sum_probs=201.6

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCc----EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGE----TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~----~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      ++|++.+.||+|+||.||+|.+..+|.    .+|+|.+.....  ......+.+|+.+++.+ +||||+++++++... .
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~-~   82 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG--PKANVEFMDEALIMASM-DHPHLVRLLGVCLSP-T   82 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC--HHHHHHHHHHHHHHHhC-CCCCcccEEEEEcCC-C
Confidence            578999999999999999999887776    467777754321  22234678899999999 899999999998754 5


Q ss_pred             EEEEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      .++++||+++|+|.+++.... .+++..+..++.|++.||.|||+++|+||||||+||++   +.++.+||+|||++...
T Consensus        83 ~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill---~~~~~~kL~Dfg~~~~~  159 (303)
T cd05110          83 IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLV---KSPNHVKITDFGLARLL  159 (303)
T ss_pred             ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeee---cCCCceEEccccccccc
Confidence            679999999999999987643 58999999999999999999999999999999999999   45678999999999865


Q ss_pred             CCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          236 KPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       236 ~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      .....   .....++..|+|||.+. ..++.++|||||||++|+|++ |..||.+.........+..+. .++.  .+..
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~  236 (303)
T cd05110         160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE-RLPQ--PPIC  236 (303)
T ss_pred             cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC-CCCC--CCCC
Confidence            43222   12234567899999986 468889999999999999997 999998776665555444332 2222  2456


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +..+.+++.+||..+|++||++.++++.
T Consensus       237 ~~~~~~li~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         237 TIDVYMVMVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            7899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=7.5e-37  Score=301.78  Aligned_cols=245  Identities=24%  Similarity=0.354  Sum_probs=198.3

Q ss_pred             ceeccCCceEEEEEEEccCC------cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           87 KELGRGEFGITHQCFEIETG------ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~------~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      +.||+|+||.||+|......      ..+|+|.+.+...  ......+.+|+.+++.+ +||||+++++++......++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v   77 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT--DQEKKEFLKEAHLMSNF-NHPNIVKLLGVCLLNEPQYII   77 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccc--hhhHHHHHHHHHHHHhc-CCCCeeeEeeeecCCCCeEEE
Confidence            36899999999999875433      6799998764421  22346788999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCC--CCCceEEeeccc
Q 043828          161 MELCEGGELFDRIVNK-------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS--ENSQLKAIDFGL  231 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~--~~~~vkl~Dfg~  231 (586)
                      |||+++++|.+++...       ..+++..+..++.|++.||.|||+++++|+||||+||+++...  ....++|+|||+
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~  157 (269)
T cd05044          78 MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL  157 (269)
T ss_pred             EeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence            9999999999998642       3378899999999999999999999999999999999995422  223899999999


Q ss_pred             ccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCC
Q 043828          232 SIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDP  306 (586)
Q Consensus       232 a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~  306 (586)
                      +........   .....++..|+|||++. +.++.++|||||||++|+|++ |..||...+.......+..+.. +  ..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~-~--~~  234 (269)
T cd05044         158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGR-L--QK  234 (269)
T ss_pred             ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCc-c--CC
Confidence            876533221   12234567899999986 468899999999999999998 9999988777666665544321 1  12


Q ss_pred             CCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       307 ~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ...++..+.++|.+||.++|.+||+++++++
T Consensus       235 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         235 PENCPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             cccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            2467899999999999999999999999875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.7e-36  Score=301.64  Aligned_cols=249  Identities=27%  Similarity=0.409  Sum_probs=200.8

Q ss_pred             cCeeecceeccCCceEEEEEEEc----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe--C
Q 043828           81 DKYTFGKELGRGEFGITHQCFEI----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED--K  154 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~--~  154 (586)
                      +.|++.+.||+|+||.||+|...    .++..+|+|++......  .....+.+|+.+++.+ .||||+++++++..  .
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l-~~~~i~~~~~~~~~~~~   80 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTL-DHENIVKYKGVCEKPGG   80 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhC-CCCChheEEeeeecCCC
Confidence            46888999999999999999854    34789999998755432  2356789999999999 89999999999887  5


Q ss_pred             CeEEEEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          155 DAIYLVMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                      ...++||||+++++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||++   +.++.++|+|||.+.
T Consensus        81 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~---~~~~~~~l~dfg~~~  157 (284)
T cd05038          81 RSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILV---ESEDLVKISDFGLAK  157 (284)
T ss_pred             CceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE---cCCCCEEEccccccc
Confidence            68999999999999999997654 58999999999999999999999999999999999999   566899999999998


Q ss_pred             ccCCCCce----ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHH--------------HHHH
Q 043828          234 FFKPGEQF----CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEG--------------IAHA  294 (586)
Q Consensus       234 ~~~~~~~~----~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--------------~~~~  294 (586)
                      ........    ....++..|+|||.+. ..++.++|||||||++|+|++|..||.......              ....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
T cd05038         158 VLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE  237 (284)
T ss_pred             ccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHH
Confidence            76532211    1223456799999886 468889999999999999999999986533221              1111


Q ss_pred             HHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          295 IIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       295 i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .......++.  ...++..+.+|+.+||+.+|.+|||+.++++
T Consensus       238 ~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         238 LLKEGERLPR--PPSCPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             HHHcCCcCCC--CccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            2222222222  2356789999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=3.6e-36  Score=296.74  Aligned_cols=243  Identities=19%  Similarity=0.269  Sum_probs=190.2

Q ss_pred             eeccCCceEEEEEEEccCC--cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccC
Q 043828           88 ELGRGEFGITHQCFEIETG--ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCE  165 (586)
Q Consensus        88 ~lG~G~~g~V~~~~~~~~~--~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~  165 (586)
                      .||+|+||.||++.....+  ..+++|.+....  .....+.+.+|+.+++.+ +||||+++++.+.....+|+||||++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~   78 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRIL-QHPNILQCLGQCVEAIPYLLVFEYCE   78 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhcc-CCcchhheEEEecCCCccEEEEecCC
Confidence            5999999999999754332  345566654432  122346788999999999 89999999999999999999999999


Q ss_pred             CCChHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC--
Q 043828          166 GGELFDRIVNK----GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE--  239 (586)
Q Consensus       166 gg~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~--  239 (586)
                      +|+|.+++...    ...++..+..++.||+.||.|||+++|+||||||+|||+   +.++.++|+|||++.......  
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~---~~~~~~~l~Dfg~~~~~~~~~~~  155 (268)
T cd05086          79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFL---TSDLTVKVGDYGIGPSRYKEDYI  155 (268)
T ss_pred             CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEE---cCCccEEecccccccccCcchhh
Confidence            99999998753    235677788999999999999999999999999999999   567889999999886432211  


Q ss_pred             -ceecccCCccccchhhhhc--------cCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhC-ccCCCCCC-C
Q 043828          240 -QFCEIVGSPYYMAPEVLRR--------NYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRG-KIDFERDP-W  307 (586)
Q Consensus       240 -~~~~~~gt~~y~aPE~l~~--------~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~-~~~~~~~~-~  307 (586)
                       ......|++.|+|||++..        .++.++|||||||++|+|++ |..||...+..+....+..+ ......+. .
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (268)
T cd05086         156 ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLE  235 (268)
T ss_pred             hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccC
Confidence             1223567889999998742        35678999999999999997 57788777776666655433 22222222 2


Q ss_pred             CCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       308 ~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ..++..+.+++..|| .+|.+||+++++++
T Consensus       236 ~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         236 LPYSERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             CCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence            347888999999999 67999999999975

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=100.00  E-value=3.5e-38  Score=309.35  Aligned_cols=257  Identities=24%  Similarity=0.401  Sum_probs=216.2

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCC-----CCCeeEEEEEEEe
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK-----HPNIVTYKEAYED  153 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~-----hpnIv~l~~~~~~  153 (586)
                      +-.+|.+....|+|-|++|..|.+...|..||||+|....    ...+.-..|++||++|..     --|+++|+..|..
T Consensus       430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE----~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h  505 (752)
T KOG0670|consen  430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE----VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH  505 (752)
T ss_pred             hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch----HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence            3468999999999999999999999999999999997654    334566789999999932     2489999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecc
Q 043828          154 KDAIYLVMELCEGGELFDRIVNKG---HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG  230 (586)
Q Consensus       154 ~~~~~iv~E~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg  230 (586)
                      .+++|||+|.+ ..+|.+.|...+   .+....+..+++||+.||..|-.+||+|.||||+|||++  .....+||||||
T Consensus       506 knHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVN--E~k~iLKLCDfG  582 (752)
T KOG0670|consen  506 KNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVN--ESKNILKLCDFG  582 (752)
T ss_pred             cceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEec--cCcceeeeccCc
Confidence            99999999988 568999888644   488899999999999999999999999999999999996  456789999999


Q ss_pred             cccccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCC--
Q 043828          231 LSIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW--  307 (586)
Q Consensus       231 ~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~--  307 (586)
                      .|.....++. +....+..|.|||++-+ .|+...|+||.||+||||+||+..|.+.+...++...+..+..||...+  
T Consensus       583 SA~~~~enei-tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRK  661 (752)
T KOG0670|consen  583 SASFASENEI-TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRK  661 (752)
T ss_pred             cccccccccc-cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhh
Confidence            9988766543 34455788999999865 7999999999999999999999999999998887776554443332100  


Q ss_pred             -----------------------------------------------CCC-------CHHHHHHHHHccCCCCCCCCCHH
Q 043828          308 -----------------------------------------------PKV-------SKEAKELVKNMLDPNPYNRLTLE  333 (586)
Q Consensus       308 -----------------------------------------------~~~-------~~~~~~li~~~L~~dp~~Rps~~  333 (586)
                                                                     +.+       -..+++|+.+||..||++|.|+.
T Consensus       662 gqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~n  741 (752)
T KOG0670|consen  662 GQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVN  741 (752)
T ss_pred             cchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHH
Confidence                                                           001       13688999999999999999999


Q ss_pred             HHhcCCCccC
Q 043828          334 EVLENPWIKN  343 (586)
Q Consensus       334 eil~hp~~~~  343 (586)
                      ++|.||||..
T Consensus       742 qAL~HpFi~~  751 (752)
T KOG0670|consen  742 QALKHPFITE  751 (752)
T ss_pred             HHhcCCcccC
Confidence            9999999974

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=2.8e-36  Score=298.40  Aligned_cols=248  Identities=22%  Similarity=0.367  Sum_probs=200.6

Q ss_pred             eeecceeccCCceEEEEEEEc---cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC----
Q 043828           83 YTFGKELGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD----  155 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~---~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~----  155 (586)
                      |++.+.||+|+||.||+|...   .++..+|+|++..... .....+.+.+|+.+++.+ +||||+++++++....    
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~   78 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIF-SSSDIEEFLREAACMKEF-DHPNVIKLIGVSLRSRAKGR   78 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccC-ChHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCCCCCc
Confidence            678889999999999999864   3578999999865432 233456788999999999 8999999999886532    


Q ss_pred             --eEEEEEeccCCCChHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEe
Q 043828          156 --AIYLVMELCEGGELFDRIVNK------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI  227 (586)
Q Consensus       156 --~~~iv~E~~~gg~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~  227 (586)
                        ..++++||+.+|+|..++...      ..++...+..++.|++.||.|||++||+||||||+||++   +.++.+||+
T Consensus        79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili---~~~~~~kl~  155 (273)
T cd05074          79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCML---NENMTVCVA  155 (273)
T ss_pred             ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEE---cCCCCEEEC
Confidence              347899999999998877532      247889999999999999999999999999999999999   567889999


Q ss_pred             ecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCC
Q 043828          228 DFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDF  302 (586)
Q Consensus       228 Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~  302 (586)
                      |||++........   .....+++.|++||.+. ..++.++|||||||++|+|++ |.+||...+.......+...... 
T Consensus       156 dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~-  234 (273)
T cd05074         156 DFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRL-  234 (273)
T ss_pred             cccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcC-
Confidence            9999886543221   12234567899999986 457889999999999999999 89999887777666665544321 


Q ss_pred             CCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          303 ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       303 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ..  .+..+..+.+++.+||+.+|.+|||+.+++.+
T Consensus       235 ~~--~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         235 KQ--PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             CC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            11  13567899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=2.9e-36  Score=301.39  Aligned_cols=248  Identities=17%  Similarity=0.166  Sum_probs=186.1

Q ss_pred             ccCeeecceeccCCceEEEEEEEccC---CcEEEEEEeeccccCChhc--------HHHHHHHHHHHHhCCCCCCeeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIET---GETYACKKIAKEKLKTEID--------IDDVRREVEIMRHLPKHPNIVTYK  148 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~~avK~i~~~~~~~~~~--------~~~~~~Ei~~l~~l~~hpnIv~l~  148 (586)
                      ..+|++.+.||+|+||+||+|.+..+   +..+|+|+...........        ......+...+..+ .|++|++++
T Consensus        11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~~~   89 (294)
T PHA02882         11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNI-DHLGIPKYY   89 (294)
T ss_pred             CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccC-CCCCCCcEE
Confidence            46899999999999999999998776   6667777643222110000        00112233445556 899999999


Q ss_pred             EEEEeCC----eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCce
Q 043828          149 EAYEDKD----AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQL  224 (586)
Q Consensus       149 ~~~~~~~----~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~v  224 (586)
                      +++....    ..++++|++. .++.+.+......++..+..++.|++.||.|||+++|+||||||+|||+   +..+.+
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill---~~~~~~  165 (294)
T PHA02882         90 GCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV---DGNNRG  165 (294)
T ss_pred             EeeeEecCCceEEEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCcE
Confidence            8765443    3478888874 4666666665557889999999999999999999999999999999999   566789


Q ss_pred             EEeecccccccCCCC--------ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCH-HHH---
Q 043828          225 KAIDFGLSIFFKPGE--------QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGI---  291 (586)
Q Consensus       225 kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~---  291 (586)
                      +|+|||+|.......        ......||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+. ...   
T Consensus       166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~  245 (294)
T PHA02882        166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHA  245 (294)
T ss_pred             EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHH
Confidence            999999997653211        1123469999999999864 689999999999999999999999977632 221   


Q ss_pred             -----HHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          292 -----AHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       292 -----~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                           ...+..+..     ..+..++.+.+++..|+..+|.+||++.++++
T Consensus       246 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        246 AKCDFIKRLHEGKI-----KIKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             hHHHHHHHhhhhhh-----ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence                 222222222     22456789999999999999999999999875

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-36  Score=300.15  Aligned_cols=251  Identities=24%  Similarity=0.348  Sum_probs=207.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .....+.++||+|-||.|.+|. ...+..||+|.++......  ....|.+||++|.+| +|||||+++++|..++.+++
T Consensus       537 Rs~L~~~ekiGeGqFGEVhLCe-veg~lkVAVK~Lr~~a~~~--~r~~F~kEIkiLsqL-khPNIveLvGVC~~DePicm  612 (807)
T KOG1094|consen  537 RSRLRFKEKIGEGQFGEVHLCE-VEGPLKVAVKILRPDATKN--ARNDFLKEIKILSRL-KHPNIVELLGVCVQDDPLCM  612 (807)
T ss_pred             hhheehhhhhcCcccceeEEEE-ecCceEEEEeecCcccchh--HHHHHHHHHHHHhcc-CCCCeeEEEeeeecCCchHH
Confidence            3578899999999999999996 3446899999998765433  247899999999999 99999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          160 VMELCEGGELFDRIVNKGH--YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |+||++.|+|.+++..+..  +.......|+.||+.|++||.+.++|||||.+.|+|+   +.++++||+|||+++.+-.
T Consensus       613 I~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv---~~e~~iKiadfgmsR~lys  689 (807)
T KOG1094|consen  613 ITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV---DGEFTIKIADFGMSRNLYS  689 (807)
T ss_pred             HHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceee---cCcccEEecCccccccccc
Confidence            9999999999999987632  3445566799999999999999999999999999999   7889999999999997655


Q ss_pred             CCcee---cccCCccccchhhh-hccCCCcchHHHHHHHHHHHh--hCCCCCCCCCHHHHHHHHHhCccCCCC----CCC
Q 043828          238 GEQFC---EIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILL--CGVPPFWAETEEGIAHAIIRGKIDFER----DPW  307 (586)
Q Consensus       238 ~~~~~---~~~gt~~y~aPE~l-~~~~~~~~DiwslG~il~~ll--~g~~pf~~~~~~~~~~~i~~~~~~~~~----~~~  307 (586)
                      ++.+.   ..+-..+|||||.+ .+.+++++|+|++|+++||++  +.+.||...+.+++.++...-......    ...
T Consensus       690 g~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P  769 (807)
T KOG1094|consen  690 GDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRP  769 (807)
T ss_pred             CCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCC
Confidence            44332   23446789999976 588999999999999999864  588999988888777765432111111    111


Q ss_pred             CCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       308 ~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +-++..+.+||.+||..+..+|||++++..
T Consensus       770 ~~cp~~lyelml~Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  770 PACPQGLYELMLRCWRRESEQRPSFEQLHL  799 (807)
T ss_pred             CcCcHHHHHHHHHHhchhhhcCCCHHHHHH
Confidence            356788999999999999999999999854

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6e-36  Score=292.27  Aligned_cols=258  Identities=23%  Similarity=0.455  Sum_probs=196.4

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCC-------CCeeEEEEEEEe
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH-------PNIVTYKEAYED  153 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~h-------pnIv~l~~~~~~  153 (586)
                      .+|.+.++||.|-|++||+|++..+.+.||+|+++....    ..+....||.+|++++.+       ..||+|++.|..
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqh----YtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh  153 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQH----YTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH  153 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhH----HHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence            699999999999999999999999999999999865432    335678899999988533       369999999974


Q ss_pred             ----CCeEEEEEeccCCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeecCC-------
Q 043828          154 ----KDAIYLVMELCEGGELFDRIVN--KGHYTERAAAAVGKTILRIVKVCHE-NGVMHRDLKPENFLFADGS-------  219 (586)
Q Consensus       154 ----~~~~~iv~E~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivHrDlkp~Nill~~~~-------  219 (586)
                          +.++|||+|++ |.+|..+|..  .+.++...++.|++|++.||.|||. +||||-||||+|||+..++       
T Consensus       154 sGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~~~~~~~  232 (590)
T KOG1290|consen  154 SGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEIDPAKDA  232 (590)
T ss_pred             cCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeeccccchhhhh
Confidence                46899999999 7899999975  4569999999999999999999996 5999999999999973210       


Q ss_pred             --------------------C--------------------------------------------------------C--
Q 043828          220 --------------------E--------------------------------------------------------N--  221 (586)
Q Consensus       220 --------------------~--------------------------------------------------------~--  221 (586)
                                          .                                                        +  
T Consensus       233 ~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~  312 (590)
T KOG1290|consen  233 REAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGN  312 (590)
T ss_pred             hhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCcc
Confidence                                0                                                        0  


Q ss_pred             ------------------------------------------------------------------------------Cc
Q 043828          222 ------------------------------------------------------------------------------SQ  223 (586)
Q Consensus       222 ------------------------------------------------------------------------------~~  223 (586)
                                                                                                    .+
T Consensus       313 ~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~  392 (590)
T KOG1290|consen  313 ESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIR  392 (590)
T ss_pred             ccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCcccee
Confidence                                                                                          01


Q ss_pred             eEEeecccccccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCC-------CHHHHHHHH
Q 043828          224 LKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAE-------TEEGIAHAI  295 (586)
Q Consensus       224 vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~-------~~~~~~~~i  295 (586)
                      |||+|||-|.-..  ...+.-+.|..|+|||++-+ .|+..+||||++|++|||+||...|...       +.+- +..|
T Consensus       393 vKIaDlGNACW~~--khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDH-iA~i  469 (590)
T KOG1290|consen  393 VKIADLGNACWVH--KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDH-IALI  469 (590)
T ss_pred             EEEeeccchhhhh--hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHH-HHHH
Confidence            4555555444321  22334456889999999864 7999999999999999999999998432       2222 2222


Q ss_pred             Hh------------CccC---C----------CCCCCC---------CC----CHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          296 IR------------GKID---F----------ERDPWP---------KV----SKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       296 ~~------------~~~~---~----------~~~~~~---------~~----~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +.            +...   |          ...+|+         ++    ..++.+||.-||+.+|.+||||.++|+
T Consensus       470 ~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~  549 (590)
T KOG1290|consen  470 MELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLK  549 (590)
T ss_pred             HHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhc
Confidence            11            1110   0          011232         12    346889999999999999999999999


Q ss_pred             CCCccCCCC
Q 043828          338 NPWIKNDNH  346 (586)
Q Consensus       338 hp~~~~~~~  346 (586)
                      |||+.....
T Consensus       550 hPwLn~~~~  558 (590)
T KOG1290|consen  550 HPWLNPVAG  558 (590)
T ss_pred             CccccCCCC
Confidence            999986543

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-36  Score=306.82  Aligned_cols=252  Identities=26%  Similarity=0.402  Sum_probs=215.4

Q ss_pred             cCeeecceeccCCceEEEEEEEccC-Cc--EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIET-GE--TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~-~~--~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ++.++.++||+|.||+|++|.+... |+  .||||.+.......  ...+|.+|+.+|.+| +|||+++||++..+ ...
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L-~H~hliRLyGvVl~-qp~  185 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKL-QHPHLIRLYGVVLD-QPA  185 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhc-cCcceeEEeeeecc-chh
Confidence            4677889999999999999988653 33  58999998766543  568999999999999 99999999999887 678


Q ss_pred             EEEEeccCCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          158 YLVMELCEGGELFDRIVN--KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      .||||++++|+|.+.|+.  ...+.......++.||+.||.||..+++|||||-..|+|+.   ....|||+|||+.+.+
T Consensus       186 mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNllla---sprtVKI~DFGLmRaL  262 (1039)
T KOG0199|consen  186 MMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLA---SPRTVKICDFGLMRAL  262 (1039)
T ss_pred             hHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheec---ccceeeeecccceecc
Confidence            899999999999999987  45688899999999999999999999999999999999995   4568999999999988


Q ss_pred             CCCCceeccc----CCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCC
Q 043828          236 KPGEQFCEIV----GSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPK  309 (586)
Q Consensus       236 ~~~~~~~~~~----gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  309 (586)
                      ..++......    -...|+|||.++ +.++.++|||++||++|||++ |+.||.+.....+++.|..+. .++.+  +-
T Consensus       263 g~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~e-rLpRP--k~  339 (1039)
T KOG0199|consen  263 GENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGE-RLPRP--KY  339 (1039)
T ss_pred             CCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccc-cCCCC--CC
Confidence            7665443322    245699999997 689999999999999999998 889999999999999988443 34443  35


Q ss_pred             CCHHHHHHHHHccCCCCCCCCCHHHHhcCCCcc
Q 043828          310 VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK  342 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~  342 (586)
                      +++.+.++++.||..+|.+|||+..|.+.-+..
T Consensus       340 csedIY~imk~cWah~paDRptFsair~~~~l~  372 (1039)
T KOG0199|consen  340 CSEDIYQIMKNCWAHNPADRPTFSAIREDLVLA  372 (1039)
T ss_pred             ChHHHHHHHHHhccCCccccccHHHHHHhHHHH
Confidence            789999999999999999999999987654444

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=100.00  E-value=2e-36  Score=313.29  Aligned_cols=249  Identities=28%  Similarity=0.440  Sum_probs=199.6

Q ss_pred             eecceeccCCce-EEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEe
Q 043828           84 TFGKELGRGEFG-ITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVME  162 (586)
Q Consensus        84 ~~~~~lG~G~~g-~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E  162 (586)
                      .-.+.+|.|+.| .||+|..  .|+.||||++-.+.      .+.+.+||..|+.-.+|||||++++.-.++...||..|
T Consensus       512 ~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e~------~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE  583 (903)
T KOG1027|consen  512 SPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEEF------FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE  583 (903)
T ss_pred             ccHHHcccCCCCcEEEEEee--CCceehHHHHhhHh------HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence            334678999998 5899854  78899999885442      35678999999999899999999999999999999999


Q ss_pred             ccCCCChHHHHHhCCC----CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecC--CCCCceEEeecccccccC
Q 043828          163 LCEGGELFDRIVNKGH----YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADG--SENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       163 ~~~gg~L~~~l~~~~~----~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~--~~~~~vkl~Dfg~a~~~~  236 (586)
                      .|. .+|.+++...+.    ......+.+..|++.||++||+.+||||||||.||||...  +....++|+|||+++...
T Consensus       584 LC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~  662 (903)
T KOG1027|consen  584 LCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA  662 (903)
T ss_pred             Hhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence            995 599999876311    1114457889999999999999999999999999999753  344689999999999886


Q ss_pred             CCCc----eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhC-CCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          237 PGEQ----FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCG-VPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       237 ~~~~----~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      .+..    .....||-+|+|||++.. .-+.++|||||||++|+.++| ..||...  .+...+|.++......-.. ..
T Consensus       663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~--~~R~~NIl~~~~~L~~L~~-~~  739 (903)
T KOG1027|consen  663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDS--LERQANILTGNYTLVHLEP-LP  739 (903)
T ss_pred             CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCch--HHhhhhhhcCccceeeecc-Cc
Confidence            5543    345689999999999975 346689999999999999886 8899653  3344566666655432211 11


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ..++++||.+||+++|..||+|.++|.||+|+..
T Consensus       740 d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~  773 (903)
T KOG1027|consen  740 DCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS  773 (903)
T ss_pred             hHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence            1289999999999999999999999999999964

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=100.00  E-value=5.4e-35  Score=283.15  Aligned_cols=242  Identities=43%  Similarity=0.747  Sum_probs=208.0

Q ss_pred             CceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCCCChHHH
Q 043828           93 EFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDR  172 (586)
Q Consensus        93 ~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~  172 (586)
                      +||.||+|.+..+|+.+|+|++........  .+.+.+|+..++++ +|+||+++++++......++++||+++++|.++
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~   77 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKL-KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL   77 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhC-CCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence            589999999988899999999876543321  57889999999999 999999999999999999999999999999999


Q ss_pred             HHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCceecccCCccccc
Q 043828          173 IVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA  252 (586)
Q Consensus       173 l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~a  252 (586)
                      +.....++...+..++.+++.++.+||+.+++|+||+|+||++   +.++.++|+|||.+.............++..|+|
T Consensus        78 ~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~---~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~  154 (244)
T smart00220       78 LKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILL---DEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMA  154 (244)
T ss_pred             HHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEE---CCCCcEEEccccceeeeccccccccccCCcCCCC
Confidence            8876668999999999999999999999999999999999999   4568999999999987765444556678999999


Q ss_pred             hhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCC-CCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCC
Q 043828          253 PEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWA-ETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRL  330 (586)
Q Consensus       253 PE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rp  330 (586)
                      ||.+. ..++.++||||+|+++|+|++|..||.. .........+......... .+..++..+.+++.+||..+|++||
T Consensus       155 pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rp  233 (244)
T smart00220      155 PEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPP-PEWKISPEAKDLIRKLLVKDPEKRL  233 (244)
T ss_pred             HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCcc-ccccCCHHHHHHHHHHccCCchhcc
Confidence            99986 5678899999999999999999999987 5555555555544443322 2222788999999999999999999


Q ss_pred             CHHHHhcCCCc
Q 043828          331 TLEEVLENPWI  341 (586)
Q Consensus       331 s~~eil~hp~~  341 (586)
                      ++.++++||||
T Consensus       234 ~~~~~~~~~~~  244 (244)
T smart00220      234 TAEEALQHPFF  244 (244)
T ss_pred             CHHHHhhCCCC
Confidence            99999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=100.00  E-value=4.7e-35  Score=305.97  Aligned_cols=258  Identities=22%  Similarity=0.322  Sum_probs=187.6

Q ss_pred             ccCeeecceeccCCceEEEEEEEc----------------cCCcEEEEEEeeccccCCh-----------hcHHHHHHHH
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEI----------------ETGETYACKKIAKEKLKTE-----------IDIDDVRREV  132 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~----------------~~~~~~avK~i~~~~~~~~-----------~~~~~~~~Ei  132 (586)
                      .++|.+.++||+|+||+||+|...                ..++.||||++........           ...+....|+
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~  223 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA  223 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence            568999999999999999999642                3456799999864321100           0112334577


Q ss_pred             HHHHhCCCCCC-----eeEEEEEEEe--------CCeEEEEEeccCCCChHHHHHhCC----------------------
Q 043828          133 EIMRHLPKHPN-----IVTYKEAYED--------KDAIYLVMELCEGGELFDRIVNKG----------------------  177 (586)
Q Consensus       133 ~~l~~l~~hpn-----Iv~l~~~~~~--------~~~~~iv~E~~~gg~L~~~l~~~~----------------------  177 (586)
                      .++.++ +|.+     +++++++|..        .+..|+||||+++++|.+++....                      
T Consensus       224 ~~l~~l-~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        224 YMCAKI-KRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHh-hcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            777777 4443     3667776642        356899999999999998886421                      


Q ss_pred             --CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCceec--ccCCccccch
Q 043828          178 --HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE--IVGSPYYMAP  253 (586)
Q Consensus       178 --~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~--~~gt~~y~aP  253 (586)
                        .+++..+..++.|++.+|.|||+.+|+||||||+|||+   +..+.+||+|||++...........  ..+|+.|+||
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl---~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP  379 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLV---TVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP  379 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEE---CCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence              23566788899999999999999999999999999999   5667899999999976543322222  2348899999


Q ss_pred             hhhhcc---------------------CC--CcchHHHHHHHHHHHhhCCC-CCCCCCHH-----------HHHHHHHhC
Q 043828          254 EVLRRN---------------------YG--PEIDVWSAGVIIYILLCGVP-PFWAETEE-----------GIAHAIIRG  298 (586)
Q Consensus       254 E~l~~~---------------------~~--~~~DiwslG~il~~ll~g~~-pf~~~~~~-----------~~~~~i~~~  298 (586)
                      |.+...                     |+  .+.||||+||++|+|++|.. ||......           .....+...
T Consensus       380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~  459 (507)
T PLN03224        380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQ  459 (507)
T ss_pred             hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhccc
Confidence            987421                     12  24799999999999999886 66432111           111111222


Q ss_pred             ccCCCCCCCCCCCHHHHHHHHHccCCCC---CCCCCHHHHhcCCCccC
Q 043828          299 KIDFERDPWPKVSKEAKELVKNMLDPNP---YNRLTLEEVLENPWIKN  343 (586)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~li~~~L~~dp---~~Rps~~eil~hp~~~~  343 (586)
                      .+.+  ..+...+..+++|+.+||..+|   .+|+|++|+|+||||.+
T Consensus       460 ~~~~--~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        460 KYDF--SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             CCCc--ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence            3333  3567789999999999999876   68999999999999975

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-36  Score=280.91  Aligned_cols=256  Identities=28%  Similarity=0.480  Sum_probs=210.1

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC---
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK---  154 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~---  154 (586)
                      .+..+|.-+..+|.|+- .|..+.+...++.+|+|++... ........+..+|...+..+ .|+||++++.+|...   
T Consensus        14 tv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v-~~~nii~l~n~ftP~~~l   90 (369)
T KOG0665|consen   14 TVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCV-NHKNIISLLNVFTPQKTL   90 (369)
T ss_pred             eeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCccchhhhhhhhhhhhh-cccceeeeeeccCccccH
Confidence            34568899999999998 7888888999999999998776 44455567889999999999 999999999999654   


Q ss_pred             ---CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          155 ---DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       155 ---~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                         ..+|+|||||. .+|...+.  -.+....+..++.|++.|++|||+.||+||||||+||++   .....+||.|||+
T Consensus        91 ~~~~e~y~v~e~m~-~nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv---~~~~~lKi~dfg~  164 (369)
T KOG0665|consen   91 EEFQEVYLVMELMD-ANLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVV---NSDCTLKILDFGL  164 (369)
T ss_pred             HHHHhHHHHHHhhh-hHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCccccee---cchhheeeccchh
Confidence               35899999995 58877776  347888999999999999999999999999999999999   6788999999999


Q ss_pred             ccccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCc-----------
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK-----------  299 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~-----------  299 (586)
                      |+.....-..+..+.|..|.|||++-+ .|...+||||+||++.||++|...|.+.+.-+...++....           
T Consensus       165 ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL  244 (369)
T KOG0665|consen  165 ARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQL  244 (369)
T ss_pred             hcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHh
Confidence            987665545677889999999999753 58999999999999999999999997765443332221100           


Q ss_pred             ----------------c----CCCCCCCC-------CCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCcc
Q 043828          300 ----------------I----DFERDPWP-------KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK  342 (586)
Q Consensus       300 ----------------~----~~~~~~~~-------~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~  342 (586)
                                      .    .|+...|+       .-+..+++|+.+||..||++|.|++++|.||||+
T Consensus       245 ~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  245 QPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             hHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence                            1    12222222       2245689999999999999999999999999997

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-36  Score=309.09  Aligned_cols=249  Identities=24%  Similarity=0.384  Sum_probs=215.5

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCc---EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGE---TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ...+|.++||.|.||.|++|+.+..|+   .||||.++.-.  .+.....|..|..||-++ +||||++|.++......+
T Consensus       629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQF-dHPNIIrLEGVVTks~Pv  705 (996)
T KOG0196|consen  629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQF-DHPNIIRLEGVVTKSKPV  705 (996)
T ss_pred             hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccC-CCCcEEEEEEEEecCcee
Confidence            356788899999999999999887764   69999886543  334457899999999999 999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      .||+|||++|+|..+|+.+ +.++..+...+++.|+.|++||-+.|+|||||-..|||+   +.+..+|++|||+++.++
T Consensus       706 MIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV---NsnLvCKVsDFGLSRvle  782 (996)
T KOG0196|consen  706 MIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLE  782 (996)
T ss_pred             EEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee---ccceEEEeccccceeecc
Confidence            9999999999999999864 679999999999999999999999999999999999999   788999999999999875


Q ss_pred             CCC--ceecccC--Cccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          237 PGE--QFCEIVG--SPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       237 ~~~--~~~~~~g--t~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      +..  .+++.-|  ..+|.|||.+. +.++.++||||+|++|||.++ |+.|||..+.++++..|..+.- +|.  ...+
T Consensus       783 dd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyR-LPp--PmDC  859 (996)
T KOG0196|consen  783 DDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYR-LPP--PMDC  859 (996)
T ss_pred             cCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccC-CCC--CCCC
Confidence            443  2222333  36799999986 789999999999999998655 9999999999999999887643 332  2468


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +..+.+|+..||++|-.+||.+.||+.+
T Consensus       860 P~aL~qLMldCWqkdR~~RP~F~qiV~~  887 (996)
T KOG0196|consen  860 PAALYQLMLDCWQKDRNRRPKFAQIVST  887 (996)
T ss_pred             cHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence            9999999999999999999999999875

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-35  Score=296.34  Aligned_cols=243  Identities=22%  Similarity=0.382  Sum_probs=208.9

Q ss_pred             eeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEe
Q 043828           83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVME  162 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E  162 (586)
                      .....+||.|.||.||.|++++..-.||||.++.+    ...++.|..|..+|+.+ +|||+|+|+++|..+..+|||+|
T Consensus       269 ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED----tMeveEFLkEAAvMKei-kHpNLVqLLGVCT~EpPFYIiTE  343 (1157)
T KOG4278|consen  269 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTHEPPFYIITE  343 (1157)
T ss_pred             eeeeeccCCCcccceeeeeeeccceeeehhhhhhc----chhHHHHHHHHHHHHhh-cCccHHHHhhhhccCCCeEEEEe
Confidence            44456899999999999999999999999988544    34578999999999999 99999999999999999999999


Q ss_pred             ccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCc
Q 043828          163 LCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ  240 (586)
Q Consensus       163 ~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~  240 (586)
                      ||..|+|.++|++..  .++.-....++.||..|+.||..+++|||||-..|+|+   .++..||+.|||+++.+.....
T Consensus       344 fM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLV---gEnhiVKvADFGLsRlMtgDTY  420 (1157)
T KOG4278|consen  344 FMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHIVKVADFGLSRLMTGDTY  420 (1157)
T ss_pred             cccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccc---cccceEEeeccchhhhhcCCce
Confidence            999999999998743  46777778889999999999999999999999999999   6788999999999999865433


Q ss_pred             eecccC---Cccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          241 FCEIVG---SPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       241 ~~~~~g---t~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      . .-.|   ...|.|||-|. ..++.++|||+|||+|||+.| |-.||.+.+...++..+.++ +....  ...+++...
T Consensus       421 T-AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkg-yRM~~--PeGCPpkVY  496 (1157)
T KOG4278|consen  421 T-AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKG-YRMDG--PEGCPPKVY  496 (1157)
T ss_pred             e-cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcc-ccccC--CCCCCHHHH
Confidence            2 2223   45699999986 568999999999999999988 78899998888877766554 33333  357999999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhc
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +|++.||++.|..||++.|+-+
T Consensus       497 eLMraCW~WsPsDRPsFaeiHq  518 (1157)
T KOG4278|consen  497 ELMRACWNWSPSDRPSFAEIHQ  518 (1157)
T ss_pred             HHHHHHhcCCcccCccHHHHHH
Confidence            9999999999999999999843

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.7e-35  Score=295.94  Aligned_cols=244  Identities=25%  Similarity=0.393  Sum_probs=203.5

Q ss_pred             eeecceeccCCceEEEEEEEcc--CCc--EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           83 YTFGKELGRGEFGITHQCFEIE--TGE--TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~--~~~--~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      .++.+.||.|-||.||+|+...  .|+  .||||..+.+..  ....+.|..|..+|+.+ +|||||+++|++.. ...|
T Consensus       391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t--~d~tekflqEa~iMrnf-dHphIikLIGv~~e-~P~W  466 (974)
T KOG4257|consen  391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCT--PDDTEKFLQEASIMRNF-DHPHIIKLIGVCVE-QPMW  466 (974)
T ss_pred             ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCC--hhhHHHHHHHHHHHHhC-CCcchhheeeeeec-ccee
Confidence            4455689999999999997532  333  477787665442  33467899999999999 99999999999875 5789


Q ss_pred             EEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          159 LVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      ||||+++-|.|..+++. +..++......++.||..||.|||+.++|||||-..|||+   .....|||+|||+++.+..
T Consensus       467 ivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLV---sSp~CVKLaDFGLSR~~ed  543 (974)
T KOG4257|consen  467 IVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILV---SSPQCVKLADFGLSRYLED  543 (974)
T ss_pred             EEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheee---cCcceeeecccchhhhccc
Confidence            99999999999999986 4568999999999999999999999999999999999999   4566899999999999876


Q ss_pred             CCceecccC--Cccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          238 GEQFCEIVG--SPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       238 ~~~~~~~~g--t~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ...+....|  ..-|||||.+. +.++.++|||-|||.+||++. |..||.+-...+++-.+.+|.-. |.  .+.+++.
T Consensus       544 ~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRl-P~--P~nCPp~  620 (974)
T KOG4257|consen  544 DAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERL-PC--PPNCPPA  620 (974)
T ss_pred             cchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCC-CC--CCCCChH
Confidence            655544444  34699999987 679999999999999999776 99999998877777666666532 22  2578999


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHh
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVL  336 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil  336 (586)
                      +..|+.+||..+|.+||.+.++.
T Consensus       621 LYslmskcWayeP~kRPrftei~  643 (974)
T KOG4257|consen  621 LYSLMSKCWAYEPSKRPRFTEIK  643 (974)
T ss_pred             HHHHHHHHhccCcccCCcHHHHH
Confidence            99999999999999999887764

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3e-36  Score=273.77  Aligned_cols=258  Identities=26%  Similarity=0.439  Sum_probs=211.1

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC-----
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD-----  155 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~-----  155 (586)
                      .+.+-.+.||-|+||+||.+.+..+|+.+|+|++... ...-...+.+.+|+++|..+ +|.|++..++..+...     
T Consensus        53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnv-fq~L~s~krvFre~kmLcfF-kHdNVLSaLDILQPph~dfFq  130 (449)
T KOG0664|consen   53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNV-FQNLASCKRVFREIKMLSSF-RHDNVLSLLDILQPANPSFFQ  130 (449)
T ss_pred             ccCCCCCcccccceeEEEeccCCCCccchhHhhcchH-HHHHHHHHHHHHHHHHHHhh-ccccHHHHHHhcCCCCchHHH
Confidence            4555667899999999999999999999999998653 23344557889999999999 8999999988876543     


Q ss_pred             eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      .+|+|+|++. .+|...+.....++.+.+.-+++||++||+|||+.+|.||||||.|.|+   +.+-.+||||||+++..
T Consensus       131 EiYV~TELmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLV---NSNCvLKICDFGLARve  206 (449)
T KOG0664|consen  131 ELYVLTELMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLV---NSNCILKICDFGLARTW  206 (449)
T ss_pred             HHHHHHHHHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEe---ccCceEEeccccccccc
Confidence            4788999984 5888888888889999999999999999999999999999999999999   67889999999999876


Q ss_pred             CCCC--ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHh--------------
Q 043828          236 KPGE--QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR--------------  297 (586)
Q Consensus       236 ~~~~--~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~--------------  297 (586)
                      ...+  ..+.-+.|.+|+|||++.+  .|+.+.||||.|||+.||+..+..|...++-+.++.|..              
T Consensus       207 e~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~AC  286 (449)
T KOG0664|consen  207 DQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYAC  286 (449)
T ss_pred             chhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHh
Confidence            5432  3445567899999999974  799999999999999999999999988777666555532              


Q ss_pred             ---------CccCCCCC-CC------CCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          298 ---------GKIDFERD-PW------PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       298 ---------~~~~~~~~-~~------~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                               +....+.. ..      ..-..+..+++.++|..||.+|.+..+++.|+|....
T Consensus       287 EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~  349 (449)
T KOG0664|consen  287 EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEG  349 (449)
T ss_pred             hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccccc
Confidence                     11111110 00      0123467889999999999999999999999999754

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-34  Score=250.29  Aligned_cols=212  Identities=24%  Similarity=0.382  Sum_probs=177.9

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      +...-+..||+|+||.|-+.++..+|...|+|.++....  ....+++.+|+.+..+...+|.+|.+|+.+.+...+||.
T Consensus        46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn--~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIc  123 (282)
T KOG0984|consen   46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN--SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWIC  123 (282)
T ss_pred             hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC--hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEe
Confidence            456667789999999999999999999999999976543  234577889999988888999999999999999999999


Q ss_pred             EeccCCCChHHHH----HhCCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          161 MELCEGGELFDRI----VNKGHYTERAAAAVGKTILRIVKVCHEN-GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       161 ~E~~~gg~L~~~l----~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      ||.|. .+|..+.    ...+.++|..+-+|+..++.||.|||++ .++|||+||+|||+   +..++||+||||++-.+
T Consensus       124 ME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI---n~~GqVKiCDFGIsG~L  199 (282)
T KOG0984|consen  124 MELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI---NYDGQVKICDFGISGYL  199 (282)
T ss_pred             HHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE---ccCCcEEEcccccceee
Confidence            99995 4664433    3467799999999999999999999976 89999999999999   78999999999999877


Q ss_pred             CCCCceecccCCccccchhhhh-----ccCCCcchHHHHHHHHHHHhhCCCCCCC-CCHHHHHHHHHhC
Q 043828          236 KPGEQFCEIVGSPYYMAPEVLR-----RNYGPEIDVWSAGVIIYILLCGVPPFWA-ETEEGIAHAIIRG  298 (586)
Q Consensus       236 ~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~DiwslG~il~~ll~g~~pf~~-~~~~~~~~~i~~~  298 (586)
                      .++-..+--.|...|||||.+.     ..|+-++||||||++++||.+++.||.. .++-+++..+...
T Consensus       200 ~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee  268 (282)
T KOG0984|consen  200 VDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE  268 (282)
T ss_pred             hhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence            5543333356888999999884     2589999999999999999999999964 4555555555544

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=100.00  E-value=1.3e-34  Score=279.71  Aligned_cols=257  Identities=27%  Similarity=0.474  Sum_probs=204.0

Q ss_pred             CcccCeeecceeccCCceEEEEEEEcc---CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIE---TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      .+...|.++.+||.|.|++||++.+..   .++.||+|.+.....     ...+.+|+++|..+.++.||+++.+++..+
T Consensus        33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-----p~ri~~El~~L~~~gG~~ni~~~~~~~rnn  107 (418)
T KOG1167|consen   33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-----PSRILNELEMLYRLGGSDNIIKLNGCFRNN  107 (418)
T ss_pred             hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC-----chHHHHHHHHHHHhccchhhhcchhhhccC
Confidence            456789999999999999999998877   788999999866542     257899999999999999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          155 DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      +...+|+||++.....++...   ++...+..+++.++.||.++|.+|||||||||+|||+.  ...+.-.|+|||+|..
T Consensus       108 d~v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n--~~t~rg~LvDFgLA~~  182 (418)
T KOG1167|consen  108 DQVAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYN--RRTQRGVLVDFGLAQR  182 (418)
T ss_pred             CeeEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccc--cccCCceEEechhHHH
Confidence            999999999999888776643   67889999999999999999999999999999999996  4567789999999872


Q ss_pred             cC-----------------C-----------------CC-----------ceecccCCccccchhhhhc--cCCCcchHH
Q 043828          235 FK-----------------P-----------------GE-----------QFCEIVGSPYYMAPEVLRR--NYGPEIDVW  267 (586)
Q Consensus       235 ~~-----------------~-----------------~~-----------~~~~~~gt~~y~aPE~l~~--~~~~~~Diw  267 (586)
                      ..                 +                 ..           ......||++|+|||++.+  .-++++|||
T Consensus       183 ~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiw  262 (418)
T KOG1167|consen  183 YDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIW  262 (418)
T ss_pred             HHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcccee
Confidence            10                 0                 00           0113579999999999863  568899999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCHH--HHHHHH-------------HhCc--c-----------------CC-----------
Q 043828          268 SAGVIIYILLCGVPPFWAETEE--GIAHAI-------------IRGK--I-----------------DF-----------  302 (586)
Q Consensus       268 slG~il~~ll~g~~pf~~~~~~--~~~~~i-------------~~~~--~-----------------~~-----------  302 (586)
                      |.|||+..++++..||.....+  .+.+..             ..+.  +                 ..           
T Consensus       263 s~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~  342 (418)
T KOG1167|consen  263 SAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQP  342 (418)
T ss_pred             eccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccc
Confidence            9999999999999999643221  110000             0011  0                 00           


Q ss_pred             --CCCCC-CCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          303 --ERDPW-PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       303 --~~~~~-~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                        ....| ...+..+.+|+.+||..||.+|.|++++|+||||...
T Consensus       343 n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~  387 (418)
T KOG1167|consen  343 NTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA  387 (418)
T ss_pred             ceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence              00011 1235589999999999999999999999999999843

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-35  Score=297.61  Aligned_cols=259  Identities=29%  Similarity=0.481  Sum_probs=222.4

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|.++..+|.|+||.||+++++.+++..|+|+++.+.   ..+..-+..||-+++.. +|||||.|++.|.....+|
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep---~dd~~~iqqei~~~~dc-~h~nivay~gsylr~dklw   88 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP---GDDFSGIQQEIGMLRDC-RHPNIVAYFGSYLRRDKLW   88 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccC---CccccccccceeeeecC-CCcChHHHHhhhhhhcCcE
Confidence            3468999999999999999999999999999999997654   34456788899999998 9999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      |.||||.||+|.+...-.+++++.++..+.+..+++++|||+.|-+|||||-.||++   ...+.+|+.|||.+..+...
T Consensus        89 icMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanill---td~gDvklaDfgvsaqitat  165 (829)
T KOG0576|consen   89 ICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILL---TDEGDVKLADFGVSAQITAT  165 (829)
T ss_pred             EEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceee---cccCceeecccCchhhhhhh
Confidence            999999999999988888999999999999999999999999999999999999999   67889999999988765422


Q ss_pred             -CceecccCCccccchhhh----hccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCC-CCCCCCCH
Q 043828          239 -EQFCEIVGSPYYMAPEVL----RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER-DPWPKVSK  312 (586)
Q Consensus       239 -~~~~~~~gt~~y~aPE~l----~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~  312 (586)
                       -......|||+|||||+-    ++.|...+|||++|+...|+---++|-...-+........+-.+..+. ..-.++++
T Consensus       166 i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~  245 (829)
T KOG0576|consen  166 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSE  245 (829)
T ss_pred             hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchH
Confidence             234567899999999985    367999999999999999998888887776665544444333333222 22245788


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .+-+|++.+|.++|++|||++.+|.|||+...
T Consensus       246 ~fh~fvK~altknpKkRptaeklL~h~fvs~~  277 (829)
T KOG0576|consen  246 FFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT  277 (829)
T ss_pred             HHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence            99999999999999999999999999999754

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=4.9e-33  Score=322.29  Aligned_cols=240  Identities=21%  Similarity=0.258  Sum_probs=183.2

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ..|.....||+|+||.||+|++..+|..||+|++.....       ....|+.+++++ +|||||++++++.+....|+|
T Consensus       690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l-~HpnIv~~~~~~~~~~~~~lv  761 (968)
T PLN00113        690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKL-QHPNIVKLIGLCRSEKGAYLI  761 (968)
T ss_pred             hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhC-CCCCcceEEEEEEcCCCCEEE
Confidence            456677789999999999999988999999998864321       123468899999 999999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH---ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |||+++|+|.+++.   .+++..+..++.|++.||.|||   +.+|+||||||+||+++   .....++. ||.+.....
T Consensus       762 ~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~---~~~~~~~~-~~~~~~~~~  834 (968)
T PLN00113        762 HEYIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIID---GKDEPHLR-LSLPGLLCT  834 (968)
T ss_pred             EeCCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEEC---CCCceEEE-ecccccccc
Confidence            99999999999985   3789999999999999999999   66999999999999994   44555554 555433221


Q ss_pred             CCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCH-----HHHHHHHHhC---------ccCC
Q 043828          238 GEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETE-----EGIAHAIIRG---------KIDF  302 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~~i~~~---------~~~~  302 (586)
                         .....||+.|+|||++. ..|+.++|||||||++|||++|+.||.....     ..........         ....
T Consensus       835 ---~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  911 (968)
T PLN00113        835 ---DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRG  911 (968)
T ss_pred             ---CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccC
Confidence               12336889999999986 4689999999999999999999999853211     1111110000         0000


Q ss_pred             CCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          303 ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       303 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ..........++.+++.+||+.||++|||+.|+++.
T Consensus       912 ~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        912 DVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             CCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence            000000112356789999999999999999999875

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-32  Score=267.21  Aligned_cols=247  Identities=24%  Similarity=0.370  Sum_probs=192.1

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhC-CCCCCeeEEEEEEEeC--
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL-PKHPNIVTYKEAYEDK--  154 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~~hpnIv~l~~~~~~~--  154 (586)
                      .+..+.++.+.||+|.||.||+|.+  .|+.||||++...      +...+.+|.+|.+.. -+|+||+.+++.-..+  
T Consensus       208 TiarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~sr------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~g  279 (513)
T KOG2052|consen  208 TIARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSR------DERSWFRETEIYQTVMLRHENILGFIAADNKDNG  279 (513)
T ss_pred             hhhheeEEEEEecCccccceeeccc--cCCceEEEEeccc------chhhhhhHHHHHHHHHhccchhhhhhhccccCCC
Confidence            4567899999999999999999976  6899999998543      235677887777652 3899999999885433  


Q ss_pred             --CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc--------CceeccCCCCceEeecCCCCCce
Q 043828          155 --DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN--------GVMHRDLKPENFLFADGSENSQL  224 (586)
Q Consensus       155 --~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~ivHrDlkp~Nill~~~~~~~~v  224 (586)
                        ..+|||++|.+.|+|+++|.+ ..++......++..++.||++||-.        .|.|||||..|||+   ..++.+
T Consensus       280 s~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILV---Kkn~~C  355 (513)
T KOG2052|consen  280 SWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTC  355 (513)
T ss_pred             ceEEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEE---ccCCcE
Confidence              369999999999999999988 5788999999999999999999943        59999999999999   788999


Q ss_pred             EEeecccccccCCCC-----ceecccCCccccchhhhhccCC-------CcchHHHHHHHHHHHhhC----------CCC
Q 043828          225 KAIDFGLSIFFKPGE-----QFCEIVGSPYYMAPEVLRRNYG-------PEIDVWSAGVIIYILLCG----------VPP  282 (586)
Q Consensus       225 kl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~l~~~~~-------~~~DiwslG~il~~ll~g----------~~p  282 (586)
                      -|+|+|+|.......     .....+||.+|||||+|.....       ..+||||||.|+||+...          ++|
T Consensus       356 ~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~P  435 (513)
T KOG2052|consen  356 CIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLP  435 (513)
T ss_pred             EEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCC
Confidence            999999998765432     2346799999999999964322       258999999999998753          578


Q ss_pred             CCC-----CCHHHHHHHHHhCccCCCCCC-CCCCC--HHHHHHHHHccCCCCCCCCCHHHHh
Q 043828          283 FWA-----ETEEGIAHAIIRGKIDFERDP-WPKVS--KEAKELVKNMLDPNPYNRLTLEEVL  336 (586)
Q Consensus       283 f~~-----~~~~~~~~~i~~~~~~~~~~~-~~~~~--~~~~~li~~~L~~dp~~Rps~~eil  336 (586)
                      |++     .+.+++..-+.-..+....+. |...+  ..+-.+++.||..||.-|.||--+.
T Consensus       436 yyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK  497 (513)
T KOG2052|consen  436 YYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIK  497 (513)
T ss_pred             cccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence            864     233444444433444333332 32222  3466789999999999999986553

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-33  Score=281.27  Aligned_cols=200  Identities=33%  Similarity=0.553  Sum_probs=177.1

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhc-----HHHHHHHHHHHHhCCC---CCCeeEEEEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID-----IDDVRREVEIMRHLPK---HPNIVTYKEAYE  152 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~-----~~~~~~Ei~~l~~l~~---hpnIv~l~~~~~  152 (586)
                      .+|..++.+|.|+||.|++|.++.+...|++|.|.++++.....     +-.+-.||.||..| +   |+||++++++|+
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l-~~~sH~NIlKlLdfFE  639 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATL-NKHSHENILKLLDFFE  639 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHh-hhcCccchhhhhheee
Confidence            46999999999999999999999999999999998876543211     12345699999999 5   999999999999


Q ss_pred             eCCeEEEEEecc-CCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          153 DKDAIYLVMELC-EGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       153 ~~~~~~iv~E~~-~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                      +++.+||+||-. +|.+|++++..+..++|..+..|++|++.|+++||+.||||||||-+|+.+   +.+|-+||+|||.
T Consensus       640 ddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv---d~~g~~klidfgs  716 (772)
T KOG1152|consen  640 DDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV---DSNGFVKLIDFGS  716 (772)
T ss_pred             cCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEE---ecCCeEEEeeccc
Confidence            999999999976 457999999999999999999999999999999999999999999999999   7889999999999


Q ss_pred             ccccCCCCceecccCCccccchhhhhcc--CCCcchHHHHHHHHHHHhhCCCCCCC
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLRRN--YGPEIDVWSAGVIIYILLCGVPPFWA  285 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~DiwslG~il~~ll~g~~pf~~  285 (586)
                      |...+.+ .....+||..|.|||++.+.  .+..-|||+||++||.++..+.||+.
T Consensus       717 aa~~ksg-pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  717 AAYTKSG-PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             hhhhcCC-CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence            8876544 45678999999999999863  47789999999999999999999864

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-32  Score=268.17  Aligned_cols=242  Identities=27%  Similarity=0.392  Sum_probs=190.4

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhC-CCCCCeeEEEEEEEeCC---
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL-PKHPNIVTYKEAYEDKD---  155 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~~hpnIv~l~~~~~~~~---  155 (586)
                      ....++.+.||+|.||.||+|.  .+++.||||++....      .+.+.+|-+|.... -+|+||++++++-+...   
T Consensus       209 l~pl~l~eli~~Grfg~V~Kaq--L~~~~VAVKifp~~~------kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~  280 (534)
T KOG3653|consen  209 LDPLQLLELIGRGRFGCVWKAQ--LDNRLVAVKIFPEQE------KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADR  280 (534)
T ss_pred             CCchhhHHHhhcCccceeehhh--ccCceeEEEecCHHH------HHHHHhHHHHHhccCccchhHHHhhchhccCCccc
Confidence            4578888999999999999995  467999999986543      35677777776643 27999999999876554   


Q ss_pred             -eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc---------CceeccCCCCceEeecCCCCCceE
Q 043828          156 -AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN---------GVMHRDLKPENFLFADGSENSQLK  225 (586)
Q Consensus       156 -~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---------~ivHrDlkp~Nill~~~~~~~~vk  225 (586)
                       .++||+||.+.|+|.++|..+ .+++....+++..|++||+|||+.         .|+|||||..|||+   ..+.+..
T Consensus       281 ~eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv---K~DlTcc  356 (534)
T KOG3653|consen  281 MEYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV---KNDLTCC  356 (534)
T ss_pred             cceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE---ccCCcEE
Confidence             899999999999999999875 589999999999999999999953         59999999999999   6789999


Q ss_pred             EeecccccccCCCCc---eecccCCccccchhhhhccC--C-----CcchHHHHHHHHHHHhhCC------------CCC
Q 043828          226 AIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLRRNY--G-----PEIDVWSAGVIIYILLCGV------------PPF  283 (586)
Q Consensus       226 l~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~~~~--~-----~~~DiwslG~il~~ll~g~------------~pf  283 (586)
                      |+|||+|..+.+...   ....+||.+|||||+|.+..  .     .+.||||+|.|||||++.-            +||
T Consensus       357 IaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpf  436 (534)
T KOG3653|consen  357 IADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPF  436 (534)
T ss_pred             eeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCch
Confidence            999999998865533   23478999999999997643  2     2589999999999998752            334


Q ss_pred             C-----CCCHHHHHHHHHhCccCCC-CCCCCC--CCHHHHHHHHHccCCCCCCCCCHH
Q 043828          284 W-----AETEEGIAHAIIRGKIDFE-RDPWPK--VSKEAKELVKNMLDPNPYNRLTLE  333 (586)
Q Consensus       284 ~-----~~~~~~~~~~i~~~~~~~~-~~~~~~--~~~~~~~li~~~L~~dp~~Rps~~  333 (586)
                      .     ..+.+++...+.+.+.... ...|.+  ....+++.+..||..||+.|.|+.
T Consensus       437 e~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~  494 (534)
T KOG3653|consen  437 EAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG  494 (534)
T ss_pred             hHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence            2     2344455555544443221 112322  235689999999999999999985

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.1e-32  Score=292.87  Aligned_cols=249  Identities=26%  Similarity=0.432  Sum_probs=206.7

Q ss_pred             cCeeecceeccCCceEEEEEEEc---c----CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe
Q 043828           81 DKYTFGKELGRGEFGITHQCFEI---E----TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED  153 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~---~----~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~  153 (586)
                      ++..+.+.||.|+||.|++|.-.   .    ....||||........  ...+.+..|+++|+.+..||||+.+++++..
T Consensus       296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~llG~~t~  373 (609)
T KOG0200|consen  296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNLLGACTQ  373 (609)
T ss_pred             hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhheeeecc
Confidence            34567779999999999999642   1    1457899988665433  4568899999999999999999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeec
Q 043828          154 KDAIYLVMELCEGGELFDRIVNKG----------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFAD  217 (586)
Q Consensus       154 ~~~~~iv~E~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~  217 (586)
                      .+.+++|+|||..|+|.++++..+                .++......++.||+.|+.||++.++|||||-..|||+  
T Consensus       374 ~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi--  451 (609)
T KOG0200|consen  374 DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLI--  451 (609)
T ss_pred             CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEe--
Confidence            999999999999999999998765                38889999999999999999999999999999999999  


Q ss_pred             CCCCCceEEeecccccccCCCCceec--ccC--Cccccchhhhhc-cCCCcchHHHHHHHHHHHhh-CCCCCCCCC-HHH
Q 043828          218 GSENSQLKAIDFGLSIFFKPGEQFCE--IVG--SPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLC-GVPPFWAET-EEG  290 (586)
Q Consensus       218 ~~~~~~vkl~Dfg~a~~~~~~~~~~~--~~g--t~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~-g~~pf~~~~-~~~  290 (586)
                       ..+..+||+|||+|+..........  ..|  ...|||||.+.. .|+.++||||+||+|||+++ |..||.+.. ..+
T Consensus       452 -~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~  530 (609)
T KOG0200|consen  452 -TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEE  530 (609)
T ss_pred             -cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHH
Confidence             5678999999999997655443321  222  235999999974 69999999999999999998 889998855 556


Q ss_pred             HHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          291 IAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       291 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +.+.+..|.. ...+  ..++.++.++++.||+.+|++||++.++.+
T Consensus       531 l~~~l~~G~r-~~~P--~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  531 LLEFLKEGNR-MEQP--EHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             HHHHHhcCCC-CCCC--CCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence            6655555443 2222  356899999999999999999999999876

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.98  E-value=3.3e-32  Score=280.28  Aligned_cols=245  Identities=26%  Similarity=0.339  Sum_probs=205.3

Q ss_pred             eeecceeccCCceEEEEEEEccCCc----EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           83 YTFGKELGRGEFGITHQCFEIETGE----TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~~----~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      .+..++||.|+||+||+|.+...|+    +||+|++.....  ...-..+.+|+-+|.+| +|||++++++++.... +.
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~--~~~s~e~LdeAl~masl-dHpnl~RLLgvc~~s~-~q  773 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS--PKASIELLDEALRMASL-DHPNLLRLLGVCMLST-LQ  773 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCC--chhhHHHHHHHHHHhcC-CCchHHHHhhhcccch-HH
Confidence            4445689999999999999876665    577777755432  22346788999999999 9999999999987654 88


Q ss_pred             EEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          159 LVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      ||++|+++|+|.++++. +..+.......|..||++||.|||.+++|||||-..|||+   ..-..+||.|||+++...+
T Consensus       774 lvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLV---ksP~hvkitdfgla~ll~~  850 (1177)
T KOG1025|consen  774 LVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLV---KSPNHVKITDFGLAKLLAP  850 (1177)
T ss_pred             HHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheee---cCCCeEEEEecchhhccCc
Confidence            99999999999999986 4579999999999999999999999999999999999999   5667899999999998765


Q ss_pred             CCceecc---cCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCH
Q 043828          238 GEQFCEI---VGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       238 ~~~~~~~---~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      .......   .-.+.|||=|.+. ..|++++||||+||++||++| |..|+.+....++-..+..+.. ++.+  +..+-
T Consensus       851 d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR-LsqP--piCti  927 (1177)
T KOG1025|consen  851 DEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER-LSQP--PICTI  927 (1177)
T ss_pred             ccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc-CCCC--CCccH
Confidence            5432222   2245688888876 579999999999999999998 9999999998888877777665 4443  46788


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ++.-++.+||..|+..||+++++..
T Consensus       928 DVy~~mvkCwmid~~~rp~fkel~~  952 (1177)
T KOG1025|consen  928 DVYMVMVKCWMIDADSRPTFKELAE  952 (1177)
T ss_pred             HHHHHHHHHhccCcccCccHHHHHH
Confidence            9999999999999999999998764

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.3e-32  Score=250.16  Aligned_cols=257  Identities=25%  Similarity=0.347  Sum_probs=202.7

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEE-EEEeCCe
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKE-AYEDKDA  156 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~-~~~~~~~  156 (586)
                      .+.+.|.|.+.||+|-||.+.+|.++.+...+|+|.+++...    ....+.+|...--.|+.|.||+.-|+ .|+.-+.
T Consensus        21 ~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t----t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~   96 (378)
T KOG1345|consen   21 DLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT----TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDA   96 (378)
T ss_pred             chhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh----hHHHHHHHhccceeeccchhhhHHHHHHhhcCce
Confidence            456789999999999999999999999999999999987653    34789999998888989999998766 4788889


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +++++||++.|+|.+-+.. ..+.|.....++.|+++|+.|+|++++||||||.+|||+.+.+ ..+|||||||.++...
T Consensus        97 YvF~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~d-f~rvKlcDFG~t~k~g  174 (378)
T KOG1345|consen   97 YVFVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDAD-FYRVKLCDFGLTRKVG  174 (378)
T ss_pred             EEEeeccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCC-ccEEEeeecccccccC
Confidence            9999999999999876654 4588999999999999999999999999999999999998744 4599999999887543


Q ss_pred             CCCceecccCCccccchhhhhc------cCCCcchHHHHHHHHHHHhhCCCCCCCCCHH----HHHHHHHhCccCCCCCC
Q 043828          237 PGEQFCEIVGSPYYMAPEVLRR------NYGPEIDVWSAGVIIYILLCGVPPFWAETEE----GIAHAIIRGKIDFERDP  306 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~~------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~  306 (586)
                      .  .....--+..|.+||.+..      ...+.+|||.||+++|.+++|.+||......    ........+...-.+..
T Consensus       175 ~--tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~  252 (378)
T KOG1345|consen  175 T--TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKK  252 (378)
T ss_pred             c--eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchh
Confidence            2  1222234567999998742      2467899999999999999999999642211    11122222222222234


Q ss_pred             CCCCCHHHHHHHHHccCCCCCCC---CCHHHHhcCCCcc
Q 043828          307 WPKVSKEAKELVKNMLDPNPYNR---LTLEEVLENPWIK  342 (586)
Q Consensus       307 ~~~~~~~~~~li~~~L~~dp~~R---ps~~eil~hp~~~  342 (586)
                      +..+++.+..+.++-|.++|++|   -+++......|..
T Consensus       253 F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E  291 (378)
T KOG1345|consen  253 FNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKE  291 (378)
T ss_pred             hcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHH
Confidence            55688999999999999999999   4555555666764

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.97  E-value=1.6e-29  Score=238.95  Aligned_cols=210  Identities=42%  Similarity=0.711  Sum_probs=184.6

Q ss_pred             eccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccCCCC
Q 043828           89 LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGE  168 (586)
Q Consensus        89 lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~gg~  168 (586)
                      ||.|++|.||+|....+++.+++|++.......  ..+.+.+|+.+++.+ .|++|+++++++......++++|+++|++
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~~~e~~~~~~   77 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKL-NHPNIVKLYGVFEDENHLYLVMEYCEGGS   77 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhc-CCCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence            689999999999988889999999987654321  346789999999999 89999999999999999999999999999


Q ss_pred             hHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCC-CCceEEeecccccccCCCC-ceeccc
Q 043828          169 LFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSE-NSQLKAIDFGLSIFFKPGE-QFCEIV  245 (586)
Q Consensus       169 L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~-~~~vkl~Dfg~a~~~~~~~-~~~~~~  245 (586)
                      |.+++... ..++...+..++.+++.++.+||+.|++|+||+|.||++.   . .+.++|+|||.+....... ......
T Consensus        78 l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~---~~~~~~~l~d~~~~~~~~~~~~~~~~~~  154 (215)
T cd00180          78 LKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLD---SDNGKVKLADFGLSKLLTSDKSLLKTIV  154 (215)
T ss_pred             HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEe---CCCCcEEEecCCceEEccCCcchhhccc
Confidence            99998765 5789999999999999999999999999999999999994   4 6789999999987664332 123356


Q ss_pred             CCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccC
Q 043828          246 GSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD  323 (586)
Q Consensus       246 gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~  323 (586)
                      +...|++||.+..  .++.+.|+|++|+++++|                                   ..+.+++.+|+.
T Consensus       155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------------------~~~~~~l~~~l~  199 (215)
T cd00180         155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-----------------------------------PELKDLIRKMLQ  199 (215)
T ss_pred             CCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------HHHHHHHHHHhh
Confidence            7889999999865  678899999999999999                                   568999999999


Q ss_pred             CCCCCCCCHHHHhcCC
Q 043828          324 PNPYNRLTLEEVLENP  339 (586)
Q Consensus       324 ~dp~~Rps~~eil~hp  339 (586)
                      .+|.+||++.++++|+
T Consensus       200 ~~p~~R~~~~~l~~~~  215 (215)
T cd00180         200 KDPEKRPSAKEILEHL  215 (215)
T ss_pred             CCcccCcCHHHHhhCC
Confidence            9999999999999885

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.96  E-value=1.1e-28  Score=236.29  Aligned_cols=211  Identities=41%  Similarity=0.706  Sum_probs=180.8

Q ss_pred             eeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEe
Q 043828           83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVME  162 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E  162 (586)
                      |.+.+.||.|++|.||+|.+..+++.+|+|.+......  ...+.+.+|+..++++ +|+|++++++++......++++|
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~e   77 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKL-KHPNIVKLYGVFEDPEPLYLVME   77 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhC-CCCChhhheeeeecCCceEEEEe
Confidence            56788999999999999999888999999999765432  2357889999999999 89999999999999999999999


Q ss_pred             ccCCCChHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC--
Q 043828          163 LCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE--  239 (586)
Q Consensus       163 ~~~gg~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~--  239 (586)
                      |+++++|.+++..... +++..+..++.+++.++.+||+++++|+||+|.||++   +..+.++|+|||.+.......  
T Consensus        78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v---~~~~~~~l~d~g~~~~~~~~~~~  154 (225)
T smart00221       78 YCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILL---GMDGLVKLADFGLARFIHRDLAA  154 (225)
T ss_pred             ccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeeCceeeEecCcccc
Confidence            9999999999987666 8999999999999999999999999999999999999   456899999999988765432  


Q ss_pred             ceecccCCccccchhhh-h-ccCCCcchHHHHHHHHHHHhhCCCCCCC-CCH-HHHHHHHHhCc
Q 043828          240 QFCEIVGSPYYMAPEVL-R-RNYGPEIDVWSAGVIIYILLCGVPPFWA-ETE-EGIAHAIIRGK  299 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l-~-~~~~~~~DiwslG~il~~ll~g~~pf~~-~~~-~~~~~~i~~~~  299 (586)
                      ......++..|++||.+ . ..++.++|||+||+++|+|++|+.||.. ... ..+.+.+..+.
T Consensus       155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~  218 (225)
T smart00221      155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGV  218 (225)
T ss_pred             cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCC
Confidence            33445788899999998 3 3577799999999999999999999977 343 35555555554

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.96  E-value=3.3e-30  Score=290.71  Aligned_cols=199  Identities=18%  Similarity=0.246  Sum_probs=148.6

Q ss_pred             CC-CCeeEEEEEE-------EeCCeEEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCC
Q 043828          140 KH-PNIVTYKEAY-------EDKDAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKP  210 (586)
Q Consensus       140 ~h-pnIv~l~~~~-------~~~~~~~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp  210 (586)
                      .| +||++++++|       .....++.++||+ +++|.+++.. ...+++..+..+++||+.||.|||++||+||||||
T Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP  108 (793)
T PLN00181         30 SHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRP  108 (793)
T ss_pred             hHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCc
Confidence            45 5777777776       2335678889987 6699999965 34699999999999999999999999999999999


Q ss_pred             CceEeec----------------CCCCCceEEeecccccccCCC-----------------CceecccCCccccchhhhh
Q 043828          211 ENFLFAD----------------GSENSQLKAIDFGLSIFFKPG-----------------EQFCEIVGSPYYMAPEVLR  257 (586)
Q Consensus       211 ~Nill~~----------------~~~~~~vkl~Dfg~a~~~~~~-----------------~~~~~~~gt~~y~aPE~l~  257 (586)
                      +|||+..                .+..+.+|++|||+++.....                 ......+||+.|||||++.
T Consensus       109 ~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~  188 (793)
T PLN00181        109 SCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDN  188 (793)
T ss_pred             hhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhc
Confidence            9999942                123456788888877642110                 0011246899999999986


Q ss_pred             -ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHh
Q 043828          258 -RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVL  336 (586)
Q Consensus       258 -~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil  336 (586)
                       ..|+.++|||||||+||||++|.+|+....  .....+.....  +... ....+...+++.+||.++|.+|||+.|+|
T Consensus       189 ~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~L~~~P~~Rps~~eil  263 (793)
T PLN00181        189 GSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVL--PPQI-LLNWPKEASFCLWLLHPEPSCRPSMSELL  263 (793)
T ss_pred             cCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhc--Chhh-hhcCHHHHHHHHHhCCCChhhCcChHHHh
Confidence             468999999999999999999998875322  12222222211  1111 12245678999999999999999999999


Q ss_pred             cCCCccCC
Q 043828          337 ENPWIKND  344 (586)
Q Consensus       337 ~hp~~~~~  344 (586)
                      +||||...
T Consensus       264 ~h~~~~~~  271 (793)
T PLN00181        264 QSEFINEP  271 (793)
T ss_pred             hchhhhhh
Confidence            99999753

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.95  E-value=3.7e-27  Score=224.79  Aligned_cols=249  Identities=19%  Similarity=0.267  Sum_probs=200.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCC-----cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEE-e
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETG-----ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYE-D  153 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~-----~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~-~  153 (586)
                      .+++++...+-+|.||.||.|.+....     +.+-+|.++...  .+.....+..|.-.+..+ .|||+..+.++.. +
T Consensus       283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A--S~iQv~~~L~es~lly~~-sH~nll~V~~V~ie~  359 (563)
T KOG1024|consen  283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA--SQIQVNLLLQESMLLYGA-SHPNLLSVLGVSIED  359 (563)
T ss_pred             hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc--cHHHHHHHHHHHHHHhcC-cCCCccceeEEEeec
Confidence            357888889999999999999765332     234455443322  344566788888889888 7999999988764 5


Q ss_pred             CCeEEEEEeccCCCChHHHHHh--------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceE
Q 043828          154 KDAIYLVMELCEGGELFDRIVN--------KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLK  225 (586)
Q Consensus       154 ~~~~~iv~E~~~gg~L~~~l~~--------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vk  225 (586)
                      ....++++.++.-|+|..++..        ...++..+...++.|+..|+.|||+++|||.||-..|.++   ++...||
T Consensus       360 ~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI---dd~LqVk  436 (563)
T KOG1024|consen  360 YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI---DDQLQVK  436 (563)
T ss_pred             cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee---hhheeEE
Confidence            5678888999988999999872        1236777888899999999999999999999999999999   5678999


Q ss_pred             EeecccccccCCCCcee---cccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCcc
Q 043828          226 AIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKI  300 (586)
Q Consensus       226 l~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~  300 (586)
                      |+|=.+++..-+.+..+   .--....||+||.+. ..|+.++|+|||||+||||+| |+.|+..-++.++...+..|..
T Consensus       437 ltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyR  516 (563)
T KOG1024|consen  437 LTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYR  516 (563)
T ss_pred             eccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccce
Confidence            99999988765544321   112345799999996 579999999999999999988 9999999999999888877753


Q ss_pred             CCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       301 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      - ..+  .+++.++..++.-||...|++||+++|+..
T Consensus       517 l-aQP--~NCPDeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  517 L-AQP--FNCPDELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             e-cCC--CCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            2 222  368999999999999999999999999864

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.94  E-value=7.8e-27  Score=214.76  Aligned_cols=161  Identities=24%  Similarity=0.300  Sum_probs=127.5

Q ss_pred             CChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCceeccc
Q 043828          167 GELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIV  245 (586)
Q Consensus       167 g~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~  245 (586)
                      |+|.+++.. ...+++..++.++.|++.||.|||+.+      ||+|||+   +.++.+|+  ||++.......    ..
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~---~~~~~~~~--fG~~~~~~~~~----~~   65 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILL---TWDGLLKL--DGSVAFKTPEQ----SR   65 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeE---cCccceee--ccceEeecccc----CC
Confidence            689999986 456999999999999999999999998      9999999   56788888  99988754322    26


Q ss_pred             CCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHhCccCCCC---CCCCCCCH--HHHHHH
Q 043828          246 GSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAIIRGKIDFER---DPWPKVSK--EAKELV  318 (586)
Q Consensus       246 gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~~~~~~---~~~~~~~~--~~~~li  318 (586)
                      ||+.|+|||++. ..|+.++|||||||++|+|++|..||..... ......+.........   .....++.  .++++|
T Consensus        66 g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  145 (176)
T smart00750       66 VDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFM  145 (176)
T ss_pred             CcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHH
Confidence            899999999986 4689999999999999999999999976443 2233333332221111   11122333  699999


Q ss_pred             HHccCCCCCCCCCHHHHhcCCCcc
Q 043828          319 KNMLDPNPYNRLTLEEVLENPWIK  342 (586)
Q Consensus       319 ~~~L~~dp~~Rps~~eil~hp~~~  342 (586)
                      .+||..+|.+|||+.++++|+|+.
T Consensus       146 ~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      146 RVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHhcccccccCHHHHHHHHHHH
Confidence            999999999999999999999975

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=8.1e-28  Score=257.11  Aligned_cols=261  Identities=31%  Similarity=0.491  Sum_probs=199.4

Q ss_pred             cccCe-eecceeccCCceEEEEEEEccCCcEEEEEEeecc--ccCChh-cHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           79 ILDKY-TFGKELGRGEFGITHQCFEIETGETYACKKIAKE--KLKTEI-DIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        79 ~~~~y-~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~--~~~~~~-~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      +.+.| .....+|.|++|.|+.+........++.|.+...  ...... ....+..|.-+-..| .|||++..+..+.+.
T Consensus       315 ~~~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l-~h~~~~e~l~~~~~~  393 (601)
T KOG0590|consen  315 FSEKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSL-SHPNIIETLDIVQEI  393 (601)
T ss_pred             cccccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccc-cCCchhhhHHHHhhc
Confidence            34556 4567899999998888887777776777765422  111111 111255677777778 899998877776666


Q ss_pred             CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          155 DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      ...+-+||||++ +|+.++...+.++...+..++.|++.||+|+|..||.||||||+|+++   ..++.+||+|||.+..
T Consensus       394 ~~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~---~~~g~lki~Dfg~~~v  469 (601)
T KOG0590|consen  394 DGILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLV---TENGILKIIDFGAASV  469 (601)
T ss_pred             ccchhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEE---ecCCceEEeecCccee
Confidence            555566999999 999999988889999999999999999999999999999999999999   6778999999999876


Q ss_pred             cCCC-----CceecccCCccccchhhhhc-cCCC-cchHHHHHHHHHHHhhCCCCCCCCCHHHHH--HHHHh---CccCC
Q 043828          235 FKPG-----EQFCEIVGSPYYMAPEVLRR-NYGP-EIDVWSAGVIIYILLCGVPPFWAETEEGIA--HAIIR---GKIDF  302 (586)
Q Consensus       235 ~~~~-----~~~~~~~gt~~y~aPE~l~~-~~~~-~~DiwslG~il~~ll~g~~pf~~~~~~~~~--~~i~~---~~~~~  302 (586)
                      ....     ......+|+..|+|||++.+ .|.+ ..||||.|+++..|++|+.||.-....+..  .....   ....-
T Consensus       470 f~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~  549 (601)
T KOG0590|consen  470 FRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEG  549 (601)
T ss_pred             eccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccC
Confidence            5322     23356789999999999964 5655 589999999999999999999654433221  11111   11111


Q ss_pred             CCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          303 ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       303 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +...+..++...+.+|.+||++||.+|.|+++|++.+||+..
T Consensus       550 ~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i  591 (601)
T KOG0590|consen  550 PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI  591 (601)
T ss_pred             hHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence            222345678899999999999999999999999999999864

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.94  E-value=5.6e-25  Score=221.91  Aligned_cols=253  Identities=23%  Similarity=0.291  Sum_probs=193.7

Q ss_pred             CeeecceeccCCceEEEEEEEccCC-cEEEEEEeeccccCChhcHHHHHHHHHHHHhCC---CCCCeeEEEEEE-EeCCe
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETG-ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP---KHPNIVTYKEAY-EDKDA  156 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~-~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~---~hpnIv~l~~~~-~~~~~  156 (586)
                      +|++.++||+|+||.||.|.+..++ ..+|+|..........   ..+..|+.++..+.   ..++++.+++.+ ..+..
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~   95 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF   95 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence            8999999999999999999987765 5788888765432221   25778999999884   246999999999 57888


Q ss_pred             EEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCC--CCCceEEeecccc
Q 043828          157 IYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS--ENSQLKAIDFGLS  232 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~--~~~~vkl~Dfg~a  232 (586)
                      .||||+.+ |.+|.++....  +.++...+..++.|++.+|.++|+.|++||||||.|+++....  ....+.|.|||++
T Consensus        96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla  174 (322)
T KOG1164|consen   96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA  174 (322)
T ss_pred             eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence            99999998 88999977543  5799999999999999999999999999999999999997432  1257999999999


Q ss_pred             cccC---CCC-------c-eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc
Q 043828          233 IFFK---PGE-------Q-FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI  300 (586)
Q Consensus       233 ~~~~---~~~-------~-~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~  300 (586)
                      +...   ...       . .....||..|+++.+..+ ..+++.|+||++.++.+++.|..||...........+.....
T Consensus       175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~  254 (322)
T KOG1164|consen  175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR  254 (322)
T ss_pred             ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence            8321   111       1 123559999999998764 688999999999999999999999976553222222222211


Q ss_pred             CCCCC-CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          301 DFERD-PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       301 ~~~~~-~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ..... .....+..+..+...+-..+...+|....+...
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~  293 (322)
T KOG1164|consen  255 KLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL  293 (322)
T ss_pred             hhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence            11111 223345778888888877889999988877654

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.93  E-value=2.1e-24  Score=219.09  Aligned_cols=255  Identities=33%  Similarity=0.541  Sum_probs=208.4

Q ss_pred             eeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCC-CeeEEEEEEEeCCeEEEEE
Q 043828           83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP-NIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hp-nIv~l~~~~~~~~~~~iv~  161 (586)
                      |.+.+.||.|+||.||.+.+.   ..+++|.+.............+.+|+.++..+ .|+ +|+++.+.+......++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~   77 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASL-NHPPNIVKLYDFFQDEGSLYLVM   77 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHc-cCCcceeeEEEEEecCCEEEEEE
Confidence            788899999999999999876   78899998776654433457889999999999 566 8999999998888899999


Q ss_pred             eccCCCChHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCC-ceEEeecccccccCC
Q 043828          162 ELCEGGELFDRIVNKG---HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENS-QLKAIDFGLSIFFKP  237 (586)
Q Consensus       162 E~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~-~vkl~Dfg~a~~~~~  237 (586)
                      +++.++++.+++....   .++...+..++.|++.++.|+|+.+++|||+||+||++   +... .++++|||.+.....
T Consensus        78 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~---~~~~~~~~l~dfg~~~~~~~  154 (384)
T COG0515          78 EYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILL---DRDGRVVKLIDFGLAKLLPD  154 (384)
T ss_pred             ecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeee---cCCCCeEEEeccCcceecCC
Confidence            9999999997776654   79999999999999999999999999999999999999   4455 799999999875543


Q ss_pred             CC-------ceecccCCccccchhhhhc----cCCCcchHHHHHHHHHHHhhCCCCCCCCCH----HHHHHHHHhCccC-
Q 043828          238 GE-------QFCEIVGSPYYMAPEVLRR----NYGPEIDVWSAGVIIYILLCGVPPFWAETE----EGIAHAIIRGKID-  301 (586)
Q Consensus       238 ~~-------~~~~~~gt~~y~aPE~l~~----~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~~~i~~~~~~-  301 (586)
                      ..       ......|++.|+|||.+..    .++...|+||+|++++++++|..||.....    ......+...... 
T Consensus       155 ~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  234 (384)
T COG0515         155 PGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPS  234 (384)
T ss_pred             CCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcc
Confidence            32       2356789999999999864    578889999999999999999999877653    4445554444433 


Q ss_pred             CCCCCCCCC----CHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          302 FERDPWPKV----SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       302 ~~~~~~~~~----~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .........    ...+.+++.+++..+|..|.+..+...++|....
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~  281 (384)
T COG0515         235 LASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL  281 (384)
T ss_pred             cccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence            222211111    2578999999999999999999999999777643

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.93  E-value=1e-25  Score=226.13  Aligned_cols=166  Identities=20%  Similarity=0.271  Sum_probs=130.3

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEcc-CCcEEEEEEeecccc--CChhcHHHHHHHHHHHHhCCCCCCeeE-EEEEEE
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIE-TGETYACKKIAKEKL--KTEIDIDDVRREVEIMRHLPKHPNIVT-YKEAYE  152 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~~avK~i~~~~~--~~~~~~~~~~~Ei~~l~~l~~hpnIv~-l~~~~~  152 (586)
                      ..+.++|.+.+.||+|+||+||+|++.. +++.+|+|++.....  ........+.+|+.+|++| +|+||+. ++++  
T Consensus        14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L-~h~~iv~~l~~~--   90 (365)
T PRK09188         14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTV-RGIGVVPQLLAT--   90 (365)
T ss_pred             ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhc-cCCCCCcEEEEc--
Confidence            4566789999999999999999998876 677889998753311  1222356789999999999 8999884 5542  


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccC-CCCceEeecCCCCCceEEeeccc
Q 043828          153 DKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDL-KPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       153 ~~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDl-kp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                        +..|||||||+|++|.. +.   ...   ...++.|++.+|.|||+.||+|||| ||+|||+   +.++.+||+|||+
T Consensus        91 --~~~~LVmE~~~G~~L~~-~~---~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv---~~~~~ikLiDFGl  158 (365)
T PRK09188         91 --GKDGLVRGWTEGVPLHL-AR---PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLM---GPDGEAAVIDFQL  158 (365)
T ss_pred             --CCcEEEEEccCCCCHHH-hC---ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEE---cCCCCEEEEECcc
Confidence              45899999999999962 21   111   1467899999999999999999999 9999999   4567899999999


Q ss_pred             ccccCCCC---------ceecccCCccccchhhhh
Q 043828          232 SIFFKPGE---------QFCEIVGSPYYMAPEVLR  257 (586)
Q Consensus       232 a~~~~~~~---------~~~~~~gt~~y~aPE~l~  257 (586)
                      |.......         ......+++.|+|||++.
T Consensus       159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~  193 (365)
T PRK09188        159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT  193 (365)
T ss_pred             ceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence            98654322         123567889999999985

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.93  E-value=3.9e-27  Score=239.47  Aligned_cols=242  Identities=27%  Similarity=0.466  Sum_probs=207.5

Q ss_pred             eeccCCceEEEEEEE---ccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEecc
Q 043828           88 ELGRGEFGITHQCFE---IETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELC  164 (586)
Q Consensus        88 ~lG~G~~g~V~~~~~---~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~  164 (586)
                      .+|+|+||.|++++.   ...|.-||+|+..+......... .-..|..++.....||.+|++...++.+...+++++|.
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~   79 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL   79 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence            379999999998853   24567899998876654433222 44567888888867999999999999999999999999


Q ss_pred             CCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCceecc
Q 043828          165 EGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI  244 (586)
Q Consensus       165 ~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~  244 (586)
                      .||.|+..+.....+.+...+.+...++.++.++|+.+|+|||+|++||++   +..|++++.|||+++..-..+..   
T Consensus        80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill---d~~Ghi~~tdfglske~v~~~~~---  153 (612)
T KOG0603|consen   80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL---LLEGHIKLTDFGLSKEAVKEKIA---  153 (612)
T ss_pred             ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee---cccCccccCCchhhhHhHhhhhc---
Confidence            999999998888889999999999999999999999999999999999999   78999999999999875433322   


Q ss_pred             cCCccccchhhhhccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCC
Q 043828          245 VGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDP  324 (586)
Q Consensus       245 ~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~  324 (586)
                      |||..|||||++. .+...+|.||+|+++|+|++|..||..    ++...|.+.....+.    .++..+++++..++..
T Consensus       154 cgt~eymApEI~~-gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~----~l~~~a~~~~~~l~~r  224 (612)
T KOG0603|consen  154 CGTYEYRAPEIIN-GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPR----ELSAEARSLFRQLFKR  224 (612)
T ss_pred             ccchhhhhhHhhh-ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCch----hhhHHHHHHHHHHHhh
Confidence            8999999999998 567889999999999999999999977    677778877776665    4778899999999999


Q ss_pred             CCCCCCC-----HHHHhcCCCccCCC
Q 043828          325 NPYNRLT-----LEEVLENPWIKNDN  345 (586)
Q Consensus       325 dp~~Rps-----~~eil~hp~~~~~~  345 (586)
                      +|.+|.-     +.|+++|+||+...
T Consensus       225 ~p~nrLg~~~~~~~eik~h~f~~~i~  250 (612)
T KOG0603|consen  225 NPENRLGAGPDGVDEIKQHEFFQSID  250 (612)
T ss_pred             CHHHHhccCcchhHHHhccchheeee
Confidence            9999984     57999999998654

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.93  E-value=2.5e-25  Score=199.49  Aligned_cols=249  Identities=21%  Similarity=0.247  Sum_probs=201.8

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      +.++|.++++||.|+||.+|.|....+|..||+|+-.....     ..++..|..+.+.|++...|+.+..++.....-.
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-----hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynv   87 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-----HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNV   87 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-----CcchhHHHHHHHHhccCCCCchhhhhccccccce
Confidence            45789999999999999999999999999999998654432     2357789999999988889999998988888899


Q ss_pred             EEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          159 LVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      +||+++ |.+|.+++.- ...++...+.-++-|++.-++|+|.++++||||||+|+|.+-+.....+.|+|||+|+.+..
T Consensus        88 lVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d  166 (341)
T KOG1163|consen   88 LVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD  166 (341)
T ss_pred             eeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence            999998 8899887753 56799999999999999999999999999999999999997666677899999999987643


Q ss_pred             CC--------ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCH---HHHHHHHHhCccCCCCC
Q 043828          238 GE--------QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETE---EGIAHAIIRGKIDFERD  305 (586)
Q Consensus       238 ~~--------~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~~i~~~~~~~~~~  305 (586)
                      ..        ......||.+|.+-...-+ .-+.+.|+=|+|.+|.++..|..||.+...   .+-.+.|...+.+.+..
T Consensus       167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie  246 (341)
T KOG1163|consen  167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIE  246 (341)
T ss_pred             ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHH
Confidence            22        2234679999999876543 457788999999999999999999987644   34455666655544332


Q ss_pred             -CCCCCCHHHHHHHHHccCCCCCCCCCHH
Q 043828          306 -PWPKVSKEAKELVKNMLDPNPYNRLTLE  333 (586)
Q Consensus       306 -~~~~~~~~~~~li~~~L~~dp~~Rps~~  333 (586)
                       .+...|.++.-.+.-|-..--.+-|...
T Consensus       247 ~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~  275 (341)
T KOG1163|consen  247 VLCKGFPAEFAMYLNYCRGLGFEEKPDYM  275 (341)
T ss_pred             HHhCCCcHHHHHHHHHHhhcCCCCCCcHH
Confidence             3456788888888888776666667653

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.93  E-value=1.2e-24  Score=203.93  Aligned_cols=201  Identities=22%  Similarity=0.355  Sum_probs=171.8

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      -.|+++++||.|+||+++.|.+..+++.||||.-+...     ...++..|....+.|...++|+.+|.+...+-+-.||
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV  102 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV  102 (449)
T ss_pred             ccceeccccccCcceeeecccccccCceEEEEeccccC-----CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence            37999999999999999999999999999999864432     2357889999999998999999999888888888999


Q ss_pred             EeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecC--CCCCceEEeecccccccCC
Q 043828          161 MELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADG--SENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~--~~~~~vkl~Dfg~a~~~~~  237 (586)
                      +|++ |.+|.+++.- .++++...++.++.|++.-+.|+|++.+|+|||||+|+||+..  .....|.|+|||+|+.+..
T Consensus       103 idLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD  181 (449)
T KOG1165|consen  103 IDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD  181 (449)
T ss_pred             hhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence            9998 8899887764 4579999999999999999999999999999999999999742  2345789999999998754


Q ss_pred             CC--------ceecccCCccccchhhh-hccCCCcchHHHHHHHHHHHhhCCCCCCCCC
Q 043828          238 GE--------QFCEIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAET  287 (586)
Q Consensus       238 ~~--------~~~~~~gt~~y~aPE~l-~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  287 (586)
                      ..        ......||.+||+-.-. .+.-+.+.|+=|||.++++.|-|.+||.+..
T Consensus       182 p~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK  240 (449)
T KOG1165|consen  182 PKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK  240 (449)
T ss_pred             ccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence            32        23456899999997653 3456788999999999999999999998753

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=99.93  E-value=1.2e-24  Score=187.44  Aligned_cols=147  Identities=30%  Similarity=0.548  Sum_probs=136.7

Q ss_pred             hcccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhc-c
Q 043828          376 VVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLK-R  454 (586)
Q Consensus       376 ~~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-~  454 (586)
                      ....+++.+++++++++|..+|.|++|.|++.||..+|+.+|.+++..++.++|..+|. +.|.|+|.+|+.++.... .
T Consensus         9 ~~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~   87 (160)
T COG5126           9 LTFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKR   87 (160)
T ss_pred             hhcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhcc
Confidence            34567889999999999999999999999999999999999999999999999999999 999999999999766544 5


Q ss_pred             CCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          455 IGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       455 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ...+++++.+|+.||+|++|+|+..||..+|..+|...+ +++++.++..+|.|+||.|+|++|.+.+..
T Consensus        88 ~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~-deev~~ll~~~d~d~dG~i~~~eF~~~~~~  156 (160)
T COG5126          88 GDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLS-DEEVEKLLKEYDEDGDGEIDYEEFKKLIKD  156 (160)
T ss_pred             CCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCC-HHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence            566899999999999999999999999999999999887 999999999999999999999999998764

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.91  E-value=1e-23  Score=187.41  Aligned_cols=143  Identities=34%  Similarity=0.662  Sum_probs=131.5

Q ss_pred             CchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCC----
Q 043828          381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIG----  456 (586)
Q Consensus       381 l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~----  456 (586)
                      +..++..+++++|..||.|++|+|+..||..+++.+|..++..++..++..+|.|++|.|+++||+.++.......    
T Consensus         2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~   81 (151)
T KOG0027|consen    2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEE   81 (151)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhccccccc
Confidence            3567788999999999999999999999999999999999999999999999999999999999999776543322    


Q ss_pred             -chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          457 -NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       457 -~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                       ..++++++|+.||+|++|+||++||+.+|..+|...+ .+++..+++.+|.|+||.|+|+||+.+|..
T Consensus        82 ~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~-~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~  149 (151)
T KOG0027|consen   82 ASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLT-DEECKEMIREVDVDGDGKVNFEEFVKMMSG  149 (151)
T ss_pred             ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCC-HHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence             3458999999999999999999999999999999888 899999999999999999999999999864

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.91  E-value=2.1e-24  Score=229.84  Aligned_cols=220  Identities=31%  Similarity=0.541  Sum_probs=178.9

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      .+|..++.|..|+||.||.++|+.+.+.+|+ ++.++.+        +.+-  ++... ++|.+|               
T Consensus        83 ~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~l--------ilRn--ilt~a-~npfvv---------------  135 (1205)
T KOG0606|consen   83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNL--------ILRN--ILTFA-GNPFVV---------------  135 (1205)
T ss_pred             cccceeEeeccCCCCceeeeeccccccchhh-cccccch--------hhhc--ccccc-CCccee---------------
Confidence            5799999999999999999999999999999 5544432        1111  33333 666666               


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC---
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP---  237 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~---  237 (586)
                            |+=...+.+-+.++...        +.+++|||+.||+|||+||+|.++   ..-+++|+.|||+++..--   
T Consensus       136 ------gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllI---T~mGhiKlTDfgLsk~GLms~a  198 (1205)
T KOG0606|consen  136 ------GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLI---TSMGHIKLTDFGLSKKGLMSLA  198 (1205)
T ss_pred             ------chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCccee---eecccccccchhhhhhhhhhcc
Confidence                  33334455555666554        778999999999999999999999   6789999999999864310   


Q ss_pred             -----CC--------ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCC
Q 043828          238 -----GE--------QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE  303 (586)
Q Consensus       238 -----~~--------~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~  303 (586)
                           +.        .-...+|||.|.|||++. +.|+..+|+|++|+|+|+.+.|..||.+.++++++..+....+.++
T Consensus       199 tnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wp  278 (1205)
T KOG0606|consen  199 TNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWP  278 (1205)
T ss_pred             chhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcccc
Confidence                 00        112468999999999875 6799999999999999999999999999999999999999999888


Q ss_pred             CCCCCCCCHHHHHHHHHccCCCCCCCC---CHHHHhcCCCccCCC
Q 043828          304 RDPWPKVSKEAKELVKNMLDPNPYNRL---TLEEVLENPWIKNDN  345 (586)
Q Consensus       304 ~~~~~~~~~~~~~li~~~L~~dp~~Rp---s~~eil~hp~~~~~~  345 (586)
                      ... +.++++++++|.++|..+|..|.   .+-++.+|+||+...
T Consensus       279 E~d-ea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LD  322 (1205)
T KOG0606|consen  279 EED-EALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLD  322 (1205)
T ss_pred             ccC-cCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecc
Confidence            874 56899999999999999999996   677888999998643

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=99.90  E-value=1.6e-23  Score=180.64  Aligned_cols=123  Identities=20%  Similarity=0.366  Sum_probs=117.9

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKM  530 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~  530 (586)
                      .++++++|..||+|++|.|+..||..+|+.+|.+++ +.++.+|+..+|. |.|.|+|.+|+.+|...       ++++.
T Consensus        19 i~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s-~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~~~Eel~~   96 (160)
T COG5126          19 IQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPS-EAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGDKEEELRE   96 (160)
T ss_pred             HHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCc-HHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccCCcHHHHHH
Confidence            367999999999999999999999999999999998 9999999999999 99999999999999754       88999


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      ||+.||+|++|+|+..||+.+++.+|+.+++++++.||+.+|+|+||.|++.
T Consensus        97 aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~  148 (160)
T COG5126          97 AFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYE  148 (160)
T ss_pred             HHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHH
Confidence            9999999999999999999999999999999999999999999999999985

>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.90  E-value=1.9e-23  Score=195.50  Aligned_cols=201  Identities=18%  Similarity=0.233  Sum_probs=171.9

Q ss_pred             chhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhc-------c
Q 043828          382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLK-------R  454 (586)
Q Consensus       382 ~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-------~  454 (586)
                      +.+...++..+|..+|.++||+|+..||+.|+..........++.+-+..+|.|.||.|+|+||+.......       .
T Consensus        72 ~ee~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d  151 (325)
T KOG4223|consen   72 PEESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPD  151 (325)
T ss_pred             cchhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCcccccc
Confidence            344678899999999999999999999999998876666677889999999999999999999998655321       1


Q ss_pred             CC-c------hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc--
Q 043828          455 IG-N------DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG--  525 (586)
Q Consensus       455 ~~-~------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~--  525 (586)
                      .. .      ..+-++-|+..|.|+||.+|.+||..+|.+-..+.+..-.|.+-+..+|+|+||+|+++||+.-|...  
T Consensus       152 ~e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~  231 (325)
T KOG4223|consen  152 EEDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEG  231 (325)
T ss_pred             chhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccC
Confidence            11 1      12346789999999999999999999999877666656678889999999999999999999987654  


Q ss_pred             ---------hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          526 ---------ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       526 ---------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                               .+-.+.|...|+|++|+++.+|++.++.+.+......|++.|+.++|.|+||++|+-
T Consensus       232 ~~~epeWv~~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dkD~kLs~e  297 (325)
T KOG4223|consen  232 NEEEPEWVLTEREQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEADEDKDGKLSKE  297 (325)
T ss_pred             CCCCcccccccHHHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhccCccccccHH
Confidence                     223467788999999999999999999999999999999999999999999999863

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.89  E-value=2.4e-23  Score=200.03  Aligned_cols=235  Identities=23%  Similarity=0.394  Sum_probs=153.8

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCC---------CCCeeEEEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK---------HPNIVTYKEAY  151 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~---------hpnIv~l~~~~  151 (586)
                      ..+..++.||.|+++.||.|.+..||+.+|+|+............+.+++|.-....+.+         |-.++..++..
T Consensus        12 r~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~   91 (288)
T PF14531_consen   12 RTLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLL   91 (288)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEE
T ss_pred             eEEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEE
Confidence            367888999999999999999999999999999876654444456777777655544422         22333333332


Q ss_pred             E---------eC---C-----eEEEEEeccCCCChHHHHH---hCCCC----CHHHHHHHHHHHHHHHHHHHHcCceecc
Q 043828          152 E---------DK---D-----AIYLVMELCEGGELFDRIV---NKGHY----TERAAAAVGKTILRIVKVCHENGVMHRD  207 (586)
Q Consensus       152 ~---------~~---~-----~~~iv~E~~~gg~L~~~l~---~~~~~----~~~~~~~i~~qi~~~l~~lH~~~ivHrD  207 (586)
                      .         ..   .     +.+++|+-+ .++|.+.+.   .....    .......+..|++..+++||..|++|+|
T Consensus        92 ~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgd  170 (288)
T PF14531_consen   92 RIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGD  170 (288)
T ss_dssp             EETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST
T ss_pred             EEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecc
Confidence            2         11   1     246788877 457766653   22222    2222344558999999999999999999


Q ss_pred             CCCCceEeecCCCCCceEEeecccccccCCCCceecccCCccccchhhhhc---------cCCCcchHHHHHHHHHHHhh
Q 043828          208 LKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR---------NYGPEIDVWSAGVIIYILLC  278 (586)
Q Consensus       208 lkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~---------~~~~~~DiwslG~il~~ll~  278 (586)
                      |+|+|+++   +.+|.+.|+||+......  ........+..|.+||....         .++.+.|.|+||+++|.|.+
T Consensus       171 i~~~nfll---~~~G~v~Lg~F~~~~r~g--~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC  245 (288)
T PF14531_consen  171 IKPENFLL---DQDGGVFLGDFSSLVRAG--TRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC  245 (288)
T ss_dssp             -SGGGEEE----TTS-EEE--GGGEEETT--EEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred             cceeeEEE---cCCCCEEEcChHHHeecC--ceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence            99999999   678999999998766543  22222445678999998742         36788999999999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCC
Q 043828          279 GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNR  329 (586)
Q Consensus       279 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R  329 (586)
                      |..||...........      .|  ..+..++..++.||..+|++||.+|
T Consensus       246 ~~lPf~~~~~~~~~~~------~f--~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  246 GRLPFGLSSPEADPEW------DF--SRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             SS-STCCCGGGSTSGG------GG--TTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             ccCCCCCCCccccccc------cc--hhcCCcCHHHHHHHHHHccCCcccC
Confidence            9999976543211110      12  2234788999999999999999987

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.89  E-value=1.4e-23  Score=191.46  Aligned_cols=247  Identities=17%  Similarity=0.248  Sum_probs=195.5

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      +.-+....+.-+|.....|..|+|++  .|..+++|++.......... ..|..|.-.|+.+ .||||+.+++.+..+.+
T Consensus       186 gid~~~lnl~tkl~e~hsgelwrgrw--qgndivakil~vr~~t~ris-rdfneefp~lrif-shpnilpvlgacnsppn  261 (448)
T KOG0195|consen  186 GIDVSSLNLITKLAESHSGELWRGRW--QGNDIVAKILNVREVTARIS-RDFNEEFPALRIF-SHPNILPVLGACNSPPN  261 (448)
T ss_pred             CcchhhhhhhhhhccCCCcccccccc--cCcchhhhhhhhhhcchhhc-chhhhhCcceeee-cCCchhhhhhhccCCCC
Confidence            44455677778899999999999987  45567888887665544332 4688899999988 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          157 IYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTILRIVKVCHENG--VMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~--ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                      +.++..||+.|+|+..+.....  ....++.+++..++.|++|||+..  |.--.|....+++++ +-..++..+|--++
T Consensus       262 lv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmide-dltarismad~kfs  340 (448)
T KOG0195|consen  262 LVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDE-DLTARISMADTKFS  340 (448)
T ss_pred             ceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecc-hhhhheecccceee
Confidence            9999999999999999987543  577889999999999999999974  445568888999943 22233444454333


Q ss_pred             cccCCCCceecccCCccccchhhhhcc----CCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCC
Q 043828          233 IFFKPGEQFCEIVGSPYYMAPEVLRRN----YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP  308 (586)
Q Consensus       233 ~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  308 (586)
                      ..      .....-.|.||+||.+++.    .-.++|+|||++++|||.|.+.||...++.+...+|.-+.+....+  |
T Consensus       341 fq------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ip--p  412 (448)
T KOG0195|consen  341 FQ------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIP--P  412 (448)
T ss_pred             ee------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCC--C
Confidence            22      1123447899999999753    2346899999999999999999999999998888887766655443  5


Q ss_pred             CCCHHHHHHHHHccCCCCCCCCCHHHHh
Q 043828          309 KVSKEAKELVKNMLDPNPYNRLTLEEVL  336 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~Rps~~eil  336 (586)
                      .++..+..|+.-|++.||.+||.++.++
T Consensus       413 gis~hm~klm~icmnedpgkrpkfdmiv  440 (448)
T KOG0195|consen  413 GISRHMNKLMNICMNEDPGKRPKFDMIV  440 (448)
T ss_pred             CccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence            8999999999999999999999988764

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.89  E-value=5.2e-23  Score=191.90  Aligned_cols=174  Identities=18%  Similarity=0.167  Sum_probs=133.6

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHH------HHHHHHHHHhCCCCCCeeEEEEEEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD------VRREVEIMRHLPKHPNIVTYKEAYE  152 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~------~~~Ei~~l~~l~~hpnIv~l~~~~~  152 (586)
                      +.++|++.+.||.|+||.||++..  ++..+|+|++.......+.....      +.+|+..+.++ .||+|+.+.+++.
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL-~~~GI~~~~d~~~  105 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV-RSEGLASLNDFYL  105 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH-HHCCCCcceEeee
Confidence            357899999999999999999644  57789999997665444433333      57899999999 9999999998876


Q ss_pred             eC--------CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCce
Q 043828          153 DK--------DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQL  224 (586)
Q Consensus       153 ~~--------~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~v  224 (586)
                      ..        +..+|||||++|.+|.++.    .+++    ....+++.+|..||+.|++|||+||+||++.   .++ +
T Consensus       106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~---~~g-i  173 (232)
T PRK10359        106 LAERKTLRYAHTYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVS---KNG-L  173 (232)
T ss_pred             ecccccccccCCeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEe---CCC-E
Confidence            43        3589999999999997763    2333    3456899999999999999999999999994   445 9


Q ss_pred             EEeecccccccCCCCceecccCCccccchhhhhccCCCcchHHHHHHHHHHHh
Q 043828          225 KAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILL  277 (586)
Q Consensus       225 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll  277 (586)
                      +|+|||.............          =++...|+.++||||||+++..+.
T Consensus       174 ~liDfg~~~~~~e~~a~d~----------~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        174 RIIDLSGKRCTAQRKAKDR----------IDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             EEEECCCcccccchhhHHH----------HHHHhHhcccccccceeEeehHHH
Confidence            9999998765422111100          123456788999999999987654

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.89  E-value=1.8e-22  Score=179.42  Aligned_cols=123  Identities=29%  Similarity=0.471  Sum_probs=117.4

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-----------h
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-----------A  526 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-----------~  526 (586)
                      ..+++++|+.||+|++|+|+..||..+++.+|..++ +.++..++..+|.|++|.|+|+||+.++...           +
T Consensus         7 ~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t-~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~   85 (151)
T KOG0027|consen    7 ILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPT-EEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSE   85 (151)
T ss_pred             HHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCC-HHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHH
Confidence            457999999999999999999999999999999988 9999999999999999999999999999854           2


Q ss_pred             HHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEec
Q 043828          527 DWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRI  581 (586)
Q Consensus       527 ~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~  581 (586)
                      .+++||+.||+|++|+|+++||+.+|..+|+.++.++++.|++.+|.|+||.|++
T Consensus        86 el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f  140 (151)
T KOG0027|consen   86 ELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNF  140 (151)
T ss_pred             HHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeH
Confidence            8999999999999999999999999999999999999999999999999999976

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.88  E-value=1.3e-22  Score=187.52  Aligned_cols=142  Identities=18%  Similarity=0.178  Sum_probs=110.5

Q ss_pred             cceeccCCceEEEEEEEccCCcEEEEEEeeccccCChh-----------------------cHHHHHHHHHHHHhCCCCC
Q 043828           86 GKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEI-----------------------DIDDVRREVEIMRHLPKHP  142 (586)
Q Consensus        86 ~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~-----------------------~~~~~~~Ei~~l~~l~~hp  142 (586)
                      .+.||+|++|.||+|.+. +|+.||+|+++........                       .......|+.++.++ .++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~   79 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL-VTA   79 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH-HHC
Confidence            467999999999999886 8999999999765321110                       012334599999999 677


Q ss_pred             CeeEEEEEEEeCCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHH-HHcCceeccCCCCceEeecCCCC
Q 043828          143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC-HENGVMHRDLKPENFLFADGSEN  221 (586)
Q Consensus       143 nIv~l~~~~~~~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~l-H~~~ivHrDlkp~Nill~~~~~~  221 (586)
                      ++.........  ..+|||||++|+++...+.....++...+..++.|++.+|.++ |+.||+||||||+|||++    .
T Consensus        80 ~v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~----~  153 (190)
T cd05147          80 GIPCPEPILLK--SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH----D  153 (190)
T ss_pred             CCCCCcEEEec--CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE----C
Confidence            66433322222  2389999999887765545556899999999999999999999 799999999999999994    3


Q ss_pred             CceEEeeccccccc
Q 043828          222 SQLKAIDFGLSIFF  235 (586)
Q Consensus       222 ~~vkl~Dfg~a~~~  235 (586)
                      +.++|+|||+|...
T Consensus       154 ~~v~LiDFG~a~~~  167 (190)
T cd05147         154 GKLYIIDVSQSVEH  167 (190)
T ss_pred             CcEEEEEccccccC
Confidence            57999999998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.88  E-value=5.6e-22  Score=180.76  Aligned_cols=188  Identities=19%  Similarity=0.249  Sum_probs=140.8

Q ss_pred             eecceeccCCceEEEEEEEccCCcEEEEEEeeccccC-ChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEe
Q 043828           84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK-TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVME  162 (586)
Q Consensus        84 ~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E  162 (586)
                      .+...|++|+||+||.+..  .+..++.+.+.....- .......+.+|+++|++|.+|++|++++++    +..|++||
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme   78 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS   78 (218)
T ss_pred             ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence            3456899999999997743  6777776666443321 111122578999999999777899999886    34699999


Q ss_pred             ccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccC-CCCceEeecCCCCCceEEeecccccccCCCCce
Q 043828          163 LCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDL-KPENFLFADGSENSQLKAIDFGLSIFFKPGEQF  241 (586)
Q Consensus       163 ~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDl-kp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~  241 (586)
                      |+.|.+|...+..      . ...++.|++.+|.++|++||+|||| ||+|||+   +.++.++|+|||+|.........
T Consensus        79 yI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv---~~~g~i~LIDFG~A~~~~~~~~~  148 (218)
T PRK12274         79 YLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLV---QEDGSPAVIDFQLAVRGNPRARW  148 (218)
T ss_pred             eecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEE---cCCCCEEEEECCCceecCCcchH
Confidence            9999988654321      1 2357789999999999999999999 7999999   45678999999999865543321


Q ss_pred             --------------ecccCCccccchhhhh--ccCC-CcchHHHHHHHHHHHhhCCCCCCCCC
Q 043828          242 --------------CEIVGSPYYMAPEVLR--RNYG-PEIDVWSAGVIIYILLCGVPPFWAET  287 (586)
Q Consensus       242 --------------~~~~gt~~y~aPE~l~--~~~~-~~~DiwslG~il~~ll~g~~pf~~~~  287 (586)
                                    .-...++.|++|+.-.  ...+ ...++++.|+-+|.++|+..|+++.+
T Consensus       149 ~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        149 MRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence                          0123578888888543  2233 45789999999999999999988764

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=99.87  E-value=4.2e-21  Score=160.48  Aligned_cols=146  Identities=27%  Similarity=0.503  Sum_probs=135.5

Q ss_pred             ccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhh-hhhccCC
Q 043828          378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMS-VHLKRIG  456 (586)
Q Consensus       378 ~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~-~~~~~~~  456 (586)
                      ...+.+++.++++..|..||.+++|+|+..||+.+++.+|..+..+++.+++..+|.++.|.|+|++|..++ ..+....
T Consensus        24 ~~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~d  103 (172)
T KOG0028|consen   24 KSELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERD  103 (172)
T ss_pred             CccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccC
Confidence            445678888999999999999999999999999999999999999999999999999999999999999864 4445556


Q ss_pred             chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       457 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      +.++++.+|+.+|.|++|+|+..+|+.+...||.+.+ ++++.+|++++|.|+||.|+-+||..+|..
T Consensus       104 t~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenlt-D~El~eMIeEAd~d~dgevneeEF~~imk~  170 (172)
T KOG0028|consen  104 TKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLT-DEELMEMIEEADRDGDGEVNEEEFIRIMKK  170 (172)
T ss_pred             cHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCcccc-HHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence            8899999999999999999999999999999999988 899999999999999999999999999864

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.86  E-value=2.4e-21  Score=179.91  Aligned_cols=144  Identities=16%  Similarity=0.163  Sum_probs=112.6

Q ss_pred             ecceeccCCceEEEEEEEccCCcEEEEEEeeccccCCh-----------------------hcHHHHHHHHHHHHhCCCC
Q 043828           85 FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE-----------------------IDIDDVRREVEIMRHLPKH  141 (586)
Q Consensus        85 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~-----------------------~~~~~~~~Ei~~l~~l~~h  141 (586)
                      +.+.||+|++|.||+|.+. +|+.||+|++........                       ........|...+.++ .|
T Consensus         1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~   78 (190)
T cd05145           1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRL-YE   78 (190)
T ss_pred             CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHH-Hh
Confidence            3578999999999999877 899999999986531100                       0012346789999999 78


Q ss_pred             CCeeEEEEEEEeCCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeecCCC
Q 043828          142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHRDLKPENFLFADGSE  220 (586)
Q Consensus       142 pnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivHrDlkp~Nill~~~~~  220 (586)
                      ++|.....+....  .||||||++|+++.........++...+..++.|++.++.++|+ .||+||||||+||++.    
T Consensus        79 ~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~----  152 (190)
T cd05145          79 AGVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH----  152 (190)
T ss_pred             CCCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE----
Confidence            8875443333322  48999999988664443345678889999999999999999999 9999999999999994    


Q ss_pred             CCceEEeecccccccC
Q 043828          221 NSQLKAIDFGLSIFFK  236 (586)
Q Consensus       221 ~~~vkl~Dfg~a~~~~  236 (586)
                      ++.++|+|||++....
T Consensus       153 ~~~~~liDFG~a~~~~  168 (190)
T cd05145         153 DGKPYIIDVSQAVELD  168 (190)
T ss_pred             CCCEEEEEcccceecC
Confidence            5789999999998654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=1.9e-21  Score=162.52  Aligned_cols=122  Identities=27%  Similarity=0.452  Sum_probs=116.9

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKM  530 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~  530 (586)
                      .++++.+|..||.+++|+|+.+||..+++++|+.+. .+++..++.++|+++.|.|+|++|...+..+       ++++.
T Consensus        32 ~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~-k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~  110 (172)
T KOG0028|consen   32 KQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPK-KEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKEEIKK  110 (172)
T ss_pred             HhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcc-hHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHHHHHH
Confidence            367999999999999999999999999999999988 8899999999999999999999999998754       88999


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEe
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLR  580 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~  580 (586)
                      +|+.||-|++|+|+..+|+.++..||++++++|+++||.++|.|+||.|+
T Consensus       111 afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevn  160 (172)
T KOG0028|consen  111 AFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVN  160 (172)
T ss_pred             HHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhccccccccc
Confidence            99999999999999999999999999999999999999999999999987

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=4.8e-21  Score=183.77  Aligned_cols=192  Identities=29%  Similarity=0.443  Sum_probs=142.9

Q ss_pred             CCCCCCeeEEEEEEEe---------------------------CCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHH
Q 043828          138 LPKHPNIVTYKEAYED---------------------------KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKT  190 (586)
Q Consensus       138 l~~hpnIv~l~~~~~~---------------------------~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~q  190 (586)
                      |.+|||||++..+|.+                           +..+|+||.-++. +|..++-.+ ..+....+-++.|
T Consensus       272 La~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~-~~s~r~~~~~laQ  349 (598)
T KOG4158|consen  272 LAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR-HRSYRTGRVILAQ  349 (598)
T ss_pred             cCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC-CCchHHHHHHHHH
Confidence            3579999999988843                           2358999998854 888887654 4566677788999


Q ss_pred             HHHHHHHHHHcCceeccCCCCceEee-cCCCCCceEEeecccccccCC-------CCceecccCCccccchhhhhccC--
Q 043828          191 ILRIVKVCHENGVMHRDLKPENFLFA-DGSENSQLKAIDFGLSIFFKP-------GEQFCEIVGSPYYMAPEVLRRNY--  260 (586)
Q Consensus       191 i~~~l~~lH~~~ivHrDlkp~Nill~-~~~~~~~vkl~Dfg~a~~~~~-------~~~~~~~~gt~~y~aPE~l~~~~--  260 (586)
                      +++|+.|||++||.|||+|.+|||+. +++.-..+.|+|||++-.-..       .......-|.-..||||+...-.  
T Consensus       350 lLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp  429 (598)
T KOG4158|consen  350 LLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGP  429 (598)
T ss_pred             HHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCC
Confidence            99999999999999999999999995 345667899999998754322       11223456788899999985321  


Q ss_pred             -----CCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHH
Q 043828          261 -----GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLE  333 (586)
Q Consensus       261 -----~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~  333 (586)
                           -.++|.|+.|.+.||+++...||+...+.-+... ....-.+|. ....+++.+++|+..+|+.||++|+++.
T Consensus       430 ~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r-~Yqe~qLPa-lp~~vpp~~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  430 NAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTR-TYQESQLPA-LPSRVPPVARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             ceeeccchhhhhhhhhhHHHHhccCCcccccchheechh-hhhhhhCCC-CcccCChHHHHHHHHHhcCCccccCCcc
Confidence                 2478999999999999999999988443221111 111111111 1246889999999999999999999864

>PRK10345 hypothetical protein; Provisional

Probab=99.85  E-value=1.7e-20  Score=174.81  Aligned_cols=138  Identities=19%  Similarity=0.181  Sum_probs=108.9

Q ss_pred             cceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCC----CCCCeeEEEEEEEeCC---e-E
Q 043828           86 GKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP----KHPNIVTYKEAYEDKD---A-I  157 (586)
Q Consensus        86 ~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~----~hpnIv~l~~~~~~~~---~-~  157 (586)
                      .+.||+|+||.||.  ++.++.. +||++......   ..+.+.+|+.+++.|.    .||||++++++++++.   . +
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~---~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~   80 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDG---GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY   80 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEeccccc---hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence            46799999999995  7777665 68988664322   3467899999999994    4799999999999873   4 3


Q ss_pred             EEEEec--cCCCChHHHHHhCCCCCHHHHHHHHHHHHHHH-HHHHHcCceeccCCCCceEeecCC-CCCceEEeecccc
Q 043828          158 YLVMEL--CEGGELFDRIVNKGHYTERAAAAVGKTILRIV-KVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLS  232 (586)
Q Consensus       158 ~iv~E~--~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l-~~lH~~~ivHrDlkp~Nill~~~~-~~~~vkl~Dfg~a  232 (586)
                      .+|+||  +.+++|.+++.+. .+++.  ..++.|++.++ .|||+++|+||||||+|||++..+ ....++|+||+.+
T Consensus        81 ~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345         81 DVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             EEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            478999  5579999999664 46666  35678888777 899999999999999999996432 3458999995433

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.84  E-value=6.7e-22  Score=211.05  Aligned_cols=245  Identities=24%  Similarity=0.345  Sum_probs=175.9

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccC-ChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK-TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~-~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      +|...+.||.+.|=+|.+|++. .| .+++|++-+..-. .-....+-..|++  ..+.++||++.+.-+...+..-|||
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~-eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik--~~l~~~pn~lPfqk~~~t~kAAylv   99 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDR-EG-LVVVKVFVKQDPTISLRPFKQRLEEIK--FALMKAPNCLPFQKVLVTDKAAYLV   99 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCC-Cc-eEEEEEEeccCCCCCchHHHHHHHHHH--HHhhcCCcccchHHHHHhhHHHHHH
Confidence            7888999999999999999753 34 4899998765421 1122233334455  2344899999999888888888999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc--CCC
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF--KPG  238 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~--~~~  238 (586)
                      -+|... +|++++..+..+..-+.+-|+.||+.||..||..||+|||||.+|||+   ..-.-+.|+||..-+..  +..
T Consensus       100 Rqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILi---TSWNW~~LtDFAsFKPtYLPeD  175 (1431)
T KOG1240|consen  100 RQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILI---TSWNWLYLTDFASFKPTYLPED  175 (1431)
T ss_pred             HHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEE---eeechhhhhcccccCCccCCCC
Confidence            999954 999999888778888888899999999999999999999999999999   45567899999754432  111


Q ss_pred             C--ce----ecccCCccccchhhhhc-----------c-CCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCc
Q 043828          239 E--QF----CEIVGSPYYMAPEVLRR-----------N-YGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGK  299 (586)
Q Consensus       239 ~--~~----~~~~gt~~y~aPE~l~~-----------~-~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~  299 (586)
                      .  ..    .+...-..|.|||-+..           . .+++.||||+||+++||++ |.+||.-   .+ +-...++.
T Consensus       176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L---SQ-L~aYr~~~  251 (1431)
T KOG1240|consen  176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL---SQ-LLAYRSGN  251 (1431)
T ss_pred             CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH---HH-HHhHhccC
Confidence            1  11    11122235999998732           1 4678999999999999988 6888821   11 11112221


Q ss_pred             cCCCCCCCCCC-CHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          300 IDFERDPWPKV-SKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       300 ~~~~~~~~~~~-~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      -..+.....++ +..++.||..|++.||.+|.+|++.|+.
T Consensus       252 ~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  252 ADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             ccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            11111111111 3468999999999999999999999986

>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.83  E-value=7e-20  Score=162.33  Aligned_cols=154  Identities=23%  Similarity=0.331  Sum_probs=142.4

Q ss_pred             hHhHHHHhhhhccCCCCCCcCHHHHHHHHHhc-CCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHH
Q 043828          385 QMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI-GQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQ  463 (586)
Q Consensus       385 ~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~-~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~  463 (586)
                      .-..+...|+..|.|+.|.|+.+||+.+|... ...++.+.++.|+..||.+.+|+|.|+||..++..++.      ++.
T Consensus        55 ~~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~~------Wr~  128 (221)
T KOG0037|consen   55 TFPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYINQ------WRN  128 (221)
T ss_pred             ccHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHH------HHH
Confidence            34578899999999999999999999999966 46678899999999999999999999999998877665      899


Q ss_pred             HHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhhhhhccCcc
Q 043828          464 AFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSAL  543 (586)
Q Consensus       464 ~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i  543 (586)
                      +|+.||+|++|.|+..||+.+|..+|...+ ++..+.+++.+|.-++|.|.|++|+.++.....+.++|+.+|.+..|.|
T Consensus       129 vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Ls-pq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~~lt~~Fr~~D~~q~G~i  207 (221)
T KOG0037|consen  129 VFRTYDRDRSGTIDSSELRQALTQLGYRLS-PQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQRLTEAFRRRDTAQQGSI  207 (221)
T ss_pred             HHHhcccCCCCcccHHHHHHHHHHcCcCCC-HHHHHHHHHHhccccCCceeHHHHHHHHHHHHHHHHHHHHhccccceeE
Confidence            999999999999999999999999999987 8888999999998889999999999999998999999999999999987


Q ss_pred             cH
Q 043828          544 SI  545 (586)
Q Consensus       544 ~~  545 (586)
                      +.
T Consensus       208 ~~  209 (221)
T KOG0037|consen  208 TI  209 (221)
T ss_pred             EE
Confidence            63

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.83  E-value=2.7e-20  Score=202.91  Aligned_cols=195  Identities=27%  Similarity=0.358  Sum_probs=157.9

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCC--CCCCeeEEEEEEEeCCeE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP--KHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~--~hpnIv~l~~~~~~~~~~  157 (586)
                      ...|.|-+.||+|+||.||+|.+.. |+.||+|+=.....      -.++--.+++.+|.  --+-|..+...+...+.-
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~------WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S  769 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNP------WEFYICLQVMERLKPQMLPSIMHISSAHVFQNAS  769 (974)
T ss_pred             ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCc------eeeeehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence            3579999999999999999998766 99999998544321      11222334455551  124455555556666778


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeec----CCCCCceEEeeccccc
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFAD----GSENSQLKAIDFGLSI  233 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~----~~~~~~vkl~Dfg~a~  233 (586)
                      ++|+||.+.|+|.+++...+.+++..+..++.||+..|.+||..+|||+||||+|+|+..    +....-++|+|||.+.
T Consensus       770 ~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~si  849 (974)
T KOG1166|consen  770 VLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSI  849 (974)
T ss_pred             eeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccce
Confidence            899999999999999998888999999999999999999999999999999999999952    2345679999999997


Q ss_pred             ccC---CCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCC
Q 043828          234 FFK---PGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVP  281 (586)
Q Consensus       234 ~~~---~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~  281 (586)
                      .+.   ++......++|-.+-.+|++.+ .++..+|.|.|+.+++-||.|..
T Consensus       850 Dm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  850 DMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             eeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence            653   4445667788999999999974 79999999999999999999964

>PTZ00184 calmodulin; Provisional

Probab=99.82  E-value=2.9e-19  Score=159.45  Aligned_cols=146  Identities=32%  Similarity=0.640  Sum_probs=130.5

Q ss_pred             ccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh-ccCC
Q 043828          378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL-KRIG  456 (586)
Q Consensus       378 ~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-~~~~  456 (586)
                      +..++.++.+.+++.|..+|.+++|.|+.+||..++..++..+..+++..+|+.+|.+++|.|+|+||+.++... ....
T Consensus         2 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~   81 (149)
T PTZ00184          2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTD   81 (149)
T ss_pred             CCccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCc
Confidence            455678888999999999999999999999999999999988899999999999999999999999999876543 2234


Q ss_pred             chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       457 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ..+.++.+|+.+|.+++|+|+.+||..++...|.... .+++..++..+|.+++|.|+|+||+.++..
T Consensus        82 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~-~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  148 (149)
T PTZ00184         82 SEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLT-DEEVDEMIREADVDGDGQINYEEFVKMMMS  148 (149)
T ss_pred             HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCC-HHHHHHHHHhcCCCCCCcCcHHHHHHHHhc
Confidence            4567899999999999999999999999998877665 888999999999999999999999988753

>PTZ00183 centrin; Provisional

Probab=99.82  E-value=4.5e-19  Score=159.88  Aligned_cols=147  Identities=28%  Similarity=0.490  Sum_probs=131.9

Q ss_pred             cccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh-ccC
Q 043828          377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL-KRI  455 (586)
Q Consensus       377 ~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-~~~  455 (586)
                      ....+.++++++++.+|..+|.+++|+|+..||..+++.+|..++..++..+|..+|.+++|.|+|+||+.++... ...
T Consensus         7 ~~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~   86 (158)
T PTZ00183          7 ERPGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGER   86 (158)
T ss_pred             ccCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCC
Confidence            3455778899999999999999999999999999999999988899999999999999999999999999865442 334


Q ss_pred             CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ...+.++.+|+.+|.+++|.|+.+||..++..+|.... ..++..++..+|.|++|.|+|+||..++..
T Consensus        87 ~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~-~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  154 (158)
T PTZ00183         87 DPREEILKAFRLFDDDKTGKISLKNLKRVAKELGETIT-DEELQEMIDEADRNGDGEISEEEFYRIMKK  154 (158)
T ss_pred             CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            45678999999999999999999999999998887665 888999999999999999999999998864

>smart00090 RIO RIO-like kinase

Probab=99.80  E-value=2.2e-19  Score=171.67  Aligned_cols=146  Identities=18%  Similarity=0.142  Sum_probs=115.0

Q ss_pred             CeeecceeccCCceEEEEEE-EccCCcEEEEEEeeccccCCh---------------------hcHHHHHHHHHHHHhCC
Q 043828           82 KYTFGKELGRGEFGITHQCF-EIETGETYACKKIAKEKLKTE---------------------IDIDDVRREVEIMRHLP  139 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~-~~~~~~~~avK~i~~~~~~~~---------------------~~~~~~~~Ei~~l~~l~  139 (586)
                      -|.+.+.||+|++|.||+|. +..+|+.||+|++........                     .....+.+|+.++.++ 
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L-  107 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL-  107 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH-
Confidence            48899999999999999998 678999999999975432100                     0112357899999999 


Q ss_pred             CC--CCeeEEEEEEEeCCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcC-ceeccCCCCceEee
Q 043828          140 KH--PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG-VMHRDLKPENFLFA  216 (586)
Q Consensus       140 ~h--pnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-ivHrDlkp~Nill~  216 (586)
                      .+  ..+++++++    ...++||||++|++|.........+....+..++.|++.++.+||+.| |+||||||+||++.
T Consensus       108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~  183 (237)
T smart00090      108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH  183 (237)
T ss_pred             HhcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE
Confidence            44  334555543    235899999999888766544555677778899999999999999999 99999999999994


Q ss_pred             cCCCCCceEEeecccccccC
Q 043828          217 DGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       217 ~~~~~~~vkl~Dfg~a~~~~  236 (586)
                          .+.++|+|||.+....
T Consensus       184 ----~~~i~LiDFg~a~~~~  199 (237)
T smart00090      184 ----DGKVVIIDVSQSVELD  199 (237)
T ss_pred             ----CCCEEEEEChhhhccC
Confidence                5689999999987543

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.80  E-value=5.7e-20  Score=183.96  Aligned_cols=175  Identities=30%  Similarity=0.459  Sum_probs=137.4

Q ss_pred             CeEEEEEeccCCCChHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          155 DAIYLVMELCEGGELFDRIVNKG---HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                      ..+||.|++|...+|.+|+....   ..+......++.|+..|+.|   ++.+|||+||.||++   ..+..+||+|||+
T Consensus       329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~---~~d~q~kIgDFgl  402 (516)
T KOG1033|consen  329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFF---SDDDQLKIGDFGL  402 (516)
T ss_pred             cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhcccccccc---ccchhhhhhhhhh
Confidence            35899999999999999997543   36778889999999999999   999999999999999   4455899999999


Q ss_pred             ccccCCCC-------ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCC
Q 043828          232 SIFFKPGE-------QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDF  302 (586)
Q Consensus       232 a~~~~~~~-------~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~  302 (586)
                      ........       ..+..+||.+||+||.+. +.|+.++||||||++|+|++. -..+|..   ......+..+.++ 
T Consensus       403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er---~~t~~d~r~g~ip-  478 (516)
T KOG1033|consen  403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER---IATLTDIRDGIIP-  478 (516)
T ss_pred             eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH---HHhhhhhhcCCCC-
Confidence            88765544       455678999999999997 579999999999999999997 3333321   2233334444443 


Q ss_pred             CCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          303 ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       303 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                       +..+.. .+.-..|+..||.+.|.+||++.+.--|+|.
T Consensus       479 -~~~~~d-~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  479 -PEFLQD-YPEEYTLLQQLLSPSPEERPSAIEVALHEFL  515 (516)
T ss_pred             -hHHhhc-CcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence             111222 2456789999999999999988888777775

>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=99.79  E-value=2.9e-19  Score=145.71  Aligned_cols=125  Identities=18%  Similarity=0.265  Sum_probs=114.7

Q ss_pred             CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCC--CCCceeHHHHHHHHhcc--------
Q 043828          456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLD--RDGRISFEEFKAMMTSG--------  525 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~--~dg~i~~~eF~~~~~~~--------  525 (586)
                      ....+++++|..||+.+||+|+..+...+|+++|.+|+ +.++.+.+...+++  +-.+|+|++|+.++...        
T Consensus         8 d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT-~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q~t   86 (152)
T KOG0030|consen    8 DQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPT-NAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQGT   86 (152)
T ss_pred             chHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCc-HHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhccccCc
Confidence            34478999999999999999999999999999999999 99999999999887  45799999999999753        


Q ss_pred             -hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          526 -ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       526 -~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                       +++.+..++||++++|.|...||+++|..+|++++++|++.++...- |++|.|+|-
T Consensus        87 ~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~e-D~nG~i~YE  143 (152)
T KOG0030|consen   87 YEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQE-DSNGCINYE  143 (152)
T ss_pred             HHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHcccc-ccCCcCcHH
Confidence             88899999999999999999999999999999999999999999854 888999873

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.79  E-value=5e-19  Score=180.93  Aligned_cols=199  Identities=25%  Similarity=0.349  Sum_probs=158.8

Q ss_pred             HhCCCCCCeeEEEEEEEeCCeEEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCc-eeccCCCCce
Q 043828          136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGV-MHRDLKPENF  213 (586)
Q Consensus       136 ~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i-vHrDlkp~Ni  213 (586)
                      +.+ .|.|+.++++.+.++..+++|.+||..|+|.+.+.. ...++......+++.|+.||.|||...| .|+.|++.|.
T Consensus         2 ~~l-~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC   80 (484)
T KOG1023|consen    2 RQL-DHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC   80 (484)
T ss_pred             ccc-chhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence            456 899999999999999999999999999999999987 4568888889999999999999999887 9999999999


Q ss_pred             EeecCCCCCceEEeecccccccCCC---CceecccCCccccchhhhhcc--------CCCcchHHHHHHHHHHHhhCCCC
Q 043828          214 LFADGSENSQLKAIDFGLSIFFKPG---EQFCEIVGSPYYMAPEVLRRN--------YGPEIDVWSAGVIIYILLCGVPP  282 (586)
Q Consensus       214 ll~~~~~~~~vkl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~l~~~--------~~~~~DiwslG~il~~ll~g~~p  282 (586)
                      ++   +....+||+|||+.......   .......-...|.|||.++..        .+.+.||||+|++++|+++...|
T Consensus        81 lv---d~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~  157 (484)
T KOG1023|consen   81 LV---DSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP  157 (484)
T ss_pred             ee---eeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence            99   68899999999998766421   111122234579999998642        46679999999999999999999


Q ss_pred             CCCC----CHHHHHHHHHhCccC-CCCCCC--CCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          283 FWAE----TEEGIAHAIIRGKID-FERDPW--PKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       283 f~~~----~~~~~~~~i~~~~~~-~~~~~~--~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      |...    .+.++...+..+... +.+..+  ....+.+..++..||..+|..||+++++-..
T Consensus       158 ~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~  220 (484)
T KOG1023|consen  158 FDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSK  220 (484)
T ss_pred             cccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhh
Confidence            9652    334556565552222 222211  1455679999999999999999999998653

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.79  E-value=5.2e-21  Score=204.96  Aligned_cols=258  Identities=30%  Similarity=0.517  Sum_probs=206.9

Q ss_pred             CeeecceeccCCceEEEEEEEccC-CcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIET-GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~-~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      .|.+.+.||+|+|+.|-.+....+ ...+|.|.+.... ........+..|..+-+.+.+|+|++.+++.....+..+++
T Consensus        21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~   99 (601)
T KOG0590|consen   21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS   99 (601)
T ss_pred             cccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence            577777899999999988865433 3456666654433 22333456667888888886699999999999999999999


Q ss_pred             EeccCCCChHHHH-HhCC-CCCHHHHHHHHHHHHHHHHHHH-HcCceeccCCCCceEeecCCCCC-ceEEeecccccccC
Q 043828          161 MELCEGGELFDRI-VNKG-HYTERAAAAVGKTILRIVKVCH-ENGVMHRDLKPENFLFADGSENS-QLKAIDFGLSIFFK  236 (586)
Q Consensus       161 ~E~~~gg~L~~~l-~~~~-~~~~~~~~~i~~qi~~~l~~lH-~~~ivHrDlkp~Nill~~~~~~~-~vkl~Dfg~a~~~~  236 (586)
                      ++|..|++++..+ .... ..+...+..++.|+..++.|+| ..++.|||+||+|.++   +..+ .+++.|||+|..+.
T Consensus       100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l---~~s~~~l~~~df~~At~~~  176 (601)
T KOG0590|consen  100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLL---DESGSALKIADFGLATAYR  176 (601)
T ss_pred             cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchh---ccCCCcccCCCchhhcccc
Confidence            9999999999988 4444 6788889999999999999999 9999999999999999   4556 89999999998765


Q ss_pred             C-C---CceecccC-Cccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHH-HHHHHHhCccCCCCCCCC
Q 043828          237 P-G---EQFCEIVG-SPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEG-IAHAIIRGKIDFERDPWP  308 (586)
Q Consensus       237 ~-~---~~~~~~~g-t~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~  308 (586)
                      . .   ......+| ++.|+|||...+  ...+..|+||+|+++.-+++|..||....... ...........+...+|.
T Consensus       177 ~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (601)
T KOG0590|consen  177 NKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWN  256 (601)
T ss_pred             ccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccc
Confidence            4 2   22345678 999999999865  45778999999999999999999986544322 112222222334466788


Q ss_pred             CCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          309 KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      .++....+++.+++..+|..|.+.+++-.+||+..
T Consensus       257 ~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  257 SISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             cCChhhhhcccccccCCchhccccccccccccccc
Confidence            99999999999999999999999999999999986

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=99.78  E-value=6.9e-18  Score=140.09  Aligned_cols=144  Identities=26%  Similarity=0.479  Sum_probs=131.1

Q ss_pred             hcccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh-cc
Q 043828          376 VVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL-KR  454 (586)
Q Consensus       376 ~~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-~~  454 (586)
                      -+-..+.+.|+++++++|..+|.|+||.|++++|+..|..+|..+++++++.|++..    .|.|+|.-|+.++... ..
T Consensus        21 nvFamf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea----~gPINft~FLTmfGekL~g   96 (171)
T KOG0031|consen   21 NVFAMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEA----PGPINFTVFLTMFGEKLNG   96 (171)
T ss_pred             hHHHHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhC----CCCeeHHHHHHHHHHHhcC
Confidence            344567899999999999999999999999999999999999999999999999975    7999999999977554 44


Q ss_pred             CCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          455 IGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       455 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ...++.+..||+.||.+++|+|..+.|+.+|...|...+ +++|+.|++.+-.|..|.|+|.+|..++..
T Consensus        97 tdpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~-~eEV~~m~r~~p~d~~G~~dy~~~~~~ith  165 (171)
T KOG0031|consen   97 TDPEEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFT-DEEVDEMYREAPIDKKGNFDYKAFTYIITH  165 (171)
T ss_pred             CCHHHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCC-HHHHHHHHHhCCcccCCceeHHHHHHHHHc
Confidence            566888999999999999999999999999999888776 999999999999999999999999999874

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.76  E-value=7.8e-18  Score=159.61  Aligned_cols=137  Identities=26%  Similarity=0.358  Sum_probs=113.0

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCCh-----hcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE-----IDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~-----~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +.||+|++|.||+|..  .|..+++|+.........     .....+.+|+.++..+ .|++|+....++.+....++||
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~   78 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRA-RKAGVNVPAVYFVDPENFIIVM   78 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCeEEEEeCCCCEEEE
Confidence            5799999999999976  778899998654332211     1234577899999999 7888877766777778889999


Q ss_pred             eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          162 ELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       162 E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      ||++|++|.+++.....    ....++.+++.+|.++|+.+++|||++|.||++.    .+.++|+|||.+..
T Consensus        79 e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~----~~~~~liDf~~a~~  143 (211)
T PRK14879         79 EYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS----GGKIYLIDFGLAEF  143 (211)
T ss_pred             EEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE----CCCEEEEECCcccC
Confidence            99999999988865422    7888999999999999999999999999999994    56899999998865

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=99.76  E-value=8.7e-18  Score=139.49  Aligned_cols=121  Identities=16%  Similarity=0.317  Sum_probs=112.8

Q ss_pred             chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHH
Q 043828          457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWK  529 (586)
Q Consensus       457 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~  529 (586)
                      ..+++++||..+|+|+||.|+.++|+.++.++|..++ +++++.|+.+.    .|.|+|.-|+.++..+       +.+.
T Consensus        30 QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~-d~elDaM~~Ea----~gPINft~FLTmfGekL~gtdpe~~I~  104 (171)
T KOG0031|consen   30 QIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIAS-DEELDAMMKEA----PGPINFTVFLTMFGEKLNGTDPEEVIL  104 (171)
T ss_pred             HHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCC-HHHHHHHHHhC----CCCeeHHHHHHHHHHHhcCCCHHHHHH
Confidence            3468999999999999999999999999999999876 99999999986    6899999999999865       7789


Q ss_pred             HHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          530 MASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       530 ~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      .||+.||.+++|+|..+.|+++|..+|.+++++|++.|++.+-.|..|.|.|.
T Consensus       105 ~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~  157 (171)
T KOG0031|consen  105 NAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYK  157 (171)
T ss_pred             HHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHH
Confidence            99999999999999999999999999999999999999999999999998863

>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=99.74  E-value=2.4e-17  Score=134.49  Aligned_cols=141  Identities=24%  Similarity=0.413  Sum_probs=125.2

Q ss_pred             CchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCC--CCCcccHhHHHhhhhhh---ccC
Q 043828          381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVD--GNGLLSCDEFVTMSVHL---KRI  455 (586)
Q Consensus       381 l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d--~dg~i~~~eF~~~~~~~---~~~  455 (586)
                      +++++..+++++|..||..+||+|+..++..+|+.+|.+|++.++.+....++.+  +--+|+|++|+.++...   +..
T Consensus         5 ~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q   84 (152)
T KOG0030|consen    5 FTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQ   84 (152)
T ss_pred             cCcchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhcccc
Confidence            4567779999999999999999999999999999999999999999999999887  45789999999977654   334


Q ss_pred             CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      .+.+.+-+-.+.||++++|.|...||+.+|..+|...+ ++|++.+++-. .|.+|.|+|+.|++.+.
T Consensus        85 ~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~-eeEVe~Llag~-eD~nG~i~YE~fVk~i~  150 (152)
T KOG0030|consen   85 GTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLT-EEEVEELLAGQ-EDSNGCINYEAFVKHIM  150 (152)
T ss_pred             CcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhcc-HHHHHHHHccc-cccCCcCcHHHHHHHHh
Confidence            56788889999999999999999999999999999887 99999998865 36679999999998754

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.73  E-value=2.5e-17  Score=154.62  Aligned_cols=134  Identities=25%  Similarity=0.304  Sum_probs=105.6

Q ss_pred             eeccCCceEEEEEEEccCCcEEEEEEeeccccCC-----hhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEe
Q 043828           88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-----EIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVME  162 (586)
Q Consensus        88 ~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~-----~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E  162 (586)
                      .||+|++|.||++.  .+|..+++|+........     ......+.+|+.++..+ .|+++....-++...+..++|||
T Consensus         1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~e   77 (199)
T TIGR03724         1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRA-RKAGVNTPVVYDVDPDNKTIVME   77 (199)
T ss_pred             CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHH-HHCCCCCCEEEEEECCCCEEEEE
Confidence            48999999999997  467889999865432211     11235678899999999 67765444444456667799999


Q ss_pred             ccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          163 LCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       163 ~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      |++|++|.+++.....       .++.+++.+|.+||+.|++|||++|.||++.    .+.++++|||++...
T Consensus        78 ~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~----~~~~~liDfg~a~~~  139 (199)
T TIGR03724        78 YIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR----DDKLYLIDFGLGKYS  139 (199)
T ss_pred             EECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE----CCcEEEEECCCCcCC
Confidence            9999999887754321       7889999999999999999999999999994    578999999988764

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.73  E-value=3.1e-17  Score=145.61  Aligned_cols=124  Identities=23%  Similarity=0.296  Sum_probs=117.1

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhhhh
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSR  537 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~  537 (586)
                      ...+...|...|+|+.|+|+.+||+++|......+...+.+.-|+..+|.+.+|+|+|.||..+|....+|+..|+.||+
T Consensus        56 ~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~~Wr~vF~~~D~  135 (221)
T KOG0037|consen   56 FPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYINQWRNVFRTYDR  135 (221)
T ss_pred             cHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhccc
Confidence            45788999999999999999999999999888888779999999999999999999999999999999999999999999


Q ss_pred             hccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEec
Q 043828          538 AMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRI  581 (586)
Q Consensus       538 d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~  581 (586)
                      |++|.|+..||+.+|..+|..+++.-.+-|++.+|.-++|.|..
T Consensus       136 D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~F  179 (221)
T KOG0037|consen  136 DRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDF  179 (221)
T ss_pred             CCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeH
Confidence            99999999999999999999999999999999999777888764

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.72  E-value=2.7e-17  Score=154.03  Aligned_cols=140  Identities=19%  Similarity=0.225  Sum_probs=108.0

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccC--C-----------------hhcHHHHHHHHHHHHhCCCCC
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK--T-----------------EIDIDDVRREVEIMRHLPKHP  142 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~--~-----------------~~~~~~~~~Ei~~l~~l~~hp  142 (586)
                      .|.+.+.||+|+||.||++... +|+.+|||++......  .                 .........|+.++..+ .|+
T Consensus        16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~   93 (198)
T cd05144          16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL-YEE   93 (198)
T ss_pred             hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH-HHc
Confidence            3888899999999999999864 7999999997653210  0                 00112367789999988 666


Q ss_pred             --CeeEEEEEEEeCCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCC
Q 043828          143 --NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSE  220 (586)
Q Consensus       143 --nIv~l~~~~~~~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~  220 (586)
                        .++..++.    ...++||||++|++|.....      ......++.+++.++.++|+.||+||||+|+||++   +.
T Consensus        94 ~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill---~~  160 (198)
T cd05144          94 GFPVPKPIDW----NRHAVVMEYIDGVELYRVRV------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILV---DD  160 (198)
T ss_pred             CCCCCceeec----CCceEEEEEeCCcchhhccc------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEE---cC
Confidence              45555442    44589999999999865432      13456788999999999999999999999999999   55


Q ss_pred             CCceEEeecccccccC
Q 043828          221 NSQLKAIDFGLSIFFK  236 (586)
Q Consensus       221 ~~~vkl~Dfg~a~~~~  236 (586)
                      ++.++|+|||++....
T Consensus       161 ~~~~~liDfg~~~~~~  176 (198)
T cd05144         161 DEKIYIIDWPQMVSTD  176 (198)
T ss_pred             CCcEEEEECCccccCC
Confidence            7899999999986543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.71  E-value=8e-17  Score=173.62  Aligned_cols=140  Identities=21%  Similarity=0.309  Sum_probs=111.7

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccC-----ChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK-----TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~-----~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      ..|...+.||+|+||+||++...  +..+++|+.......     .....+.+.+|+.+++.+ +|++|+....++.+..
T Consensus       333 ~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~  409 (535)
T PRK09605        333 RRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEA-RRAGVPTPVIYDVDPE  409 (535)
T ss_pred             cccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhh-cccCCCeeEEEEEeCC
Confidence            45677889999999999999753  444555543322111     112235688999999999 8999988877777777


Q ss_pred             eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      ..++||||++|++|.+++.        ....++.+++.+|.+||+.||+||||||+|||+.    .+.++|+|||++...
T Consensus       410 ~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~----~~~~~liDFGla~~~  477 (535)
T PRK09605        410 EKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR----DDRLYLIDFGLGKYS  477 (535)
T ss_pred             CCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE----CCcEEEEeCcccccC
Confidence            8899999999999998875        3567899999999999999999999999999992    457999999998764

>PTZ00183 centrin; Provisional

Probab=99.71  E-value=1.2e-16  Score=143.95  Aligned_cols=124  Identities=27%  Similarity=0.416  Sum_probs=113.3

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKM  530 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~  530 (586)
                      ..+++.+|..+|.+++|.|+.+||..+++.+|.... ..++..++..+|.+++|.|+|+||+.++...       +.++.
T Consensus        16 ~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~-~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~   94 (158)
T PTZ00183         16 KKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPK-KEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILK   94 (158)
T ss_pred             HHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHH
Confidence            356889999999999999999999999998887665 7889999999999999999999999877542       57899


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +|+.+|++++|+|+.+|+..++..+|..++.+++..++..+|.|++|.|++.
T Consensus        95 ~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~  146 (158)
T PTZ00183         95 AFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEE  146 (158)
T ss_pred             HHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHH
Confidence            9999999999999999999999999999999999999999999999999864

>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]

Probab=99.69  E-value=3.5e-16  Score=140.55  Aligned_cols=148  Identities=26%  Similarity=0.445  Sum_probs=121.8

Q ss_pred             cCCchhhHhHHHHhhhhccCC-CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCc-ccHhHHHhhhhhhccCC
Q 043828          379 DNLPQDQMAQIKQMFYMMDTD-KNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGL-LSCDEFVTMSVHLKRIG  456 (586)
Q Consensus       379 ~~l~~~~~~~~~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~-i~~~eF~~~~~~~~~~~  456 (586)
                      ..+...++.+++.+|.++|.+ ++|+|+.+||..+... ..+   .-..++++.+|.+++|. |+|++|+..+.......
T Consensus        25 ~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~~-~~N---p~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~  100 (187)
T KOG0034|consen   25 TQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPEL-ALN---PLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKA  100 (187)
T ss_pred             cccCHHHHHHHHHHHHHhccccccCccCHHHHHHHHHH-hcC---cHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCc
Confidence            457789999999999999999 9999999999998832 222   34678899999998888 99999999776655555


Q ss_pred             ch-hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCC------HHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHH
Q 043828          457 ND-DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNG------DQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWK  529 (586)
Q Consensus       457 ~~-~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~------~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~  529 (586)
                      .. ++++-||+.||.+++|+|+.+|+..++..+......      +..++.+|.++|.|+||.|+|+||..++...+.+.
T Consensus       101 ~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~P~~~  180 (187)
T KOG0034|consen  101 SKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQPDLL  180 (187)
T ss_pred             cHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCccHH
Confidence            44 489999999999999999999999999876553222      23456688999999999999999999998765544


Q ss_pred             H
Q 043828          530 M  530 (586)
Q Consensus       530 ~  530 (586)
                      +
T Consensus       181 ~  181 (187)
T KOG0034|consen  181 E  181 (187)
T ss_pred             H
Confidence            3

>PTZ00184 calmodulin; Provisional

Probab=99.68  E-value=2.6e-16  Score=140.26  Aligned_cols=124  Identities=23%  Similarity=0.396  Sum_probs=113.6

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKM  530 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~  530 (586)
                      .+.++..|..+|.+++|.|+.+||..++..++..+. .+.+..++..+|.+++|.|+|+||+.++...       ..+..
T Consensus        10 ~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~-~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~   88 (149)
T PTZ00184         10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKE   88 (149)
T ss_pred             HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCC-HHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHH
Confidence            356889999999999999999999999998887766 7889999999999999999999999987632       56889


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +|+.||.+++|+|+.+|++.++...|..++.+++..++..+|.+++|.|++.
T Consensus        89 ~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~  140 (149)
T PTZ00184         89 AFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE  140 (149)
T ss_pred             HHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHH
Confidence            9999999999999999999999999999999999999999999999999875

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.68  E-value=1.8e-16  Score=147.26  Aligned_cols=140  Identities=18%  Similarity=0.218  Sum_probs=99.5

Q ss_pred             cceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHH---------------------HHHHHHHHHHhCCCC-CC
Q 043828           86 GKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDID---------------------DVRREVEIMRHLPKH-PN  143 (586)
Q Consensus        86 ~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~---------------------~~~~Ei~~l~~l~~h-pn  143 (586)
                      ++.||+|+||.||+|.+. +|+.||+|++............                     ....|...+..+..+ ..
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~   80 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP   80 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence            567999999999999876 8999999998764322111111                     114566666666222 23


Q ss_pred             eeEEEEEEEeCCeEEEEEeccCCCChHH-HHHhCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeecCCCC
Q 043828          144 IVTYKEAYEDKDAIYLVMELCEGGELFD-RIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHRDLKPENFLFADGSEN  221 (586)
Q Consensus       144 Iv~l~~~~~~~~~~~iv~E~~~gg~L~~-~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivHrDlkp~Nill~~~~~~  221 (586)
                      +++.+..    ...++||||++|+.+.. .+... .. ...+..++.+++.++.++|. .+|+||||||+||+++    +
T Consensus        81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~-~~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~----~  150 (187)
T cd05119          81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDV-RL-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD----D  150 (187)
T ss_pred             CCceEec----CCCEEEEEEeCCCCccChhhhhh-hh-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE----C
Confidence            5555543    23589999999854422 11111 11 16678899999999999999 9999999999999994    6


Q ss_pred             CceEEeecccccccC
Q 043828          222 SQLKAIDFGLSIFFK  236 (586)
Q Consensus       222 ~~vkl~Dfg~a~~~~  236 (586)
                      +.++|+|||.+....
T Consensus       151 ~~~~liDfg~a~~~~  165 (187)
T cd05119         151 GKVYIIDVPQAVEID  165 (187)
T ss_pred             CcEEEEECccccccc
Confidence            789999999987543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.68  E-value=1.1e-16  Score=163.71  Aligned_cols=257  Identities=21%  Similarity=0.232  Sum_probs=198.7

Q ss_pred             cccCeeecceecc--CCceEEEEEEE--ccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           79 ILDKYTFGKELGR--GEFGITHQCFE--IETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        79 ~~~~y~~~~~lG~--G~~g~V~~~~~--~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      +...+.+...+|.  |.+|.||.+..  ..++..+|+|+-.... ..+..-..=.+|+...+++..|++.++.+..++..
T Consensus       112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~-s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~  190 (524)
T KOG0601|consen  112 FDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPF-SPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGS  190 (524)
T ss_pred             hhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCC-CCccccccccchhhcccccCccccccccCcccccC
Confidence            3456778889999  99999999988  8889999999843221 11111223356777778888899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHH----HHHHHHHcCceeccCCCCceEeecCCCC-CceEEee
Q 043828          155 DAIYLVMELCEGGELFDRIVNKG-HYTERAAAAVGKTILR----IVKVCHENGVMHRDLKPENFLFADGSEN-SQLKAID  228 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~----~l~~lH~~~ivHrDlkp~Nill~~~~~~-~~vkl~D  228 (586)
                      +..|+-+|+|. .+|..+..... .++...++....+...    ||.++|..+++|-|+||.||+.   ..+ ..++++|
T Consensus       191 ~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~---~~~~~s~~~~d  266 (524)
T KOG0601|consen  191 GILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFT---TSDWTSCKLTD  266 (524)
T ss_pred             Ccceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheec---ccccceeecCC
Confidence            99999999994 68877776644 4899999999999999    9999999999999999999999   445 7899999


Q ss_pred             cccccccCCCCce------ecccCCccccchhhhhccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCC
Q 043828          229 FGLSIFFKPGEQF------CEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF  302 (586)
Q Consensus       229 fg~a~~~~~~~~~------~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~  302 (586)
                      ||+...+.+....      ....|...|++||.+++-++...||+++|.+..+..++..++...-... ...+...  ..
T Consensus       267 f~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-W~~~r~~--~i  343 (524)
T KOG0601|consen  267 FGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSS-WSQLRQG--YI  343 (524)
T ss_pred             cceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCC-ccccccc--cC
Confidence            9998877654321      1236788999999999999999999999999999888766543321000 0000111  12


Q ss_pred             CCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          303 ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       303 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      +.......+..+...+..|++.+|-.|+++..+++|+++..
T Consensus       344 p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s  384 (524)
T KOG0601|consen  344 PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS  384 (524)
T ss_pred             chhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence            33334456777788999999999999999999999999973

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.67  E-value=1e-15  Score=137.44  Aligned_cols=155  Identities=19%  Similarity=0.297  Sum_probs=126.9

Q ss_pred             cCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCC-CHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCc
Q 043828          379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV-SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGN  457 (586)
Q Consensus       379 ~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~-~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~  457 (586)
                      ..++..++..+++-|..  .-.+|.++.++++.++...+... +..-++.+|+.+|.|+||.|+|.||+.++........
T Consensus        21 t~f~~~ei~~~Yr~Fk~--~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~   98 (193)
T KOG0044|consen   21 TKFSKKEIQQWYRGFKN--ECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTL   98 (193)
T ss_pred             cCCCHHHHHHHHHHhcc--cCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcH
Confidence            34566777777777776  45699999999999999987643 3455899999999999999999999998877777778


Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhc----CC------CCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLED----NA------GPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGAD  527 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~----~~------~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~  527 (586)
                      ++.++-+|++||.||+|+|+.+|+..++.+.    |.      ..+.++-+..+|+.+|.|+||.|+++||+......+.
T Consensus        99 eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d~~  178 (193)
T KOG0044|consen   99 EEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKADPS  178 (193)
T ss_pred             HHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhCHH
Confidence            8899999999999999999999998877542    21      1224667889999999999999999999999988766


Q ss_pred             HHHHHHhh
Q 043828          528 WKMASRQY  535 (586)
Q Consensus       528 ~~~~F~~~  535 (586)
                      +..++..+
T Consensus       179 i~~~l~~~  186 (193)
T KOG0044|consen  179 ILRALEQD  186 (193)
T ss_pred             HHHHhhhc
Confidence            66666543

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.66  E-value=6.2e-17  Score=173.46  Aligned_cols=261  Identities=26%  Similarity=0.409  Sum_probs=206.7

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      +.+.+.+-+-.|+++.++.+.-..+|...+.|+............+.+..+-.++-.- .+|.++...-.+......+++
T Consensus       804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p-~~P~v~~~~~s~~~rsP~~L~  882 (1205)
T KOG0606|consen  804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITP-RSPAVVRSFPSFPCRSPLPLV  882 (1205)
T ss_pred             ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccC-CCCceecccCCCCCCCCcchh
Confidence            4567777888899999998877777766666665433222222233444444444323 568888766666677889999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC----
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK----  236 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~----  236 (586)
                      ++|+.+++|...+++.+..+...++..+..++.++++||...+.|||++|.|.+.   ...++.++.|||......    
T Consensus       883 ~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~---~~~gh~~l~~~~t~~~vg~~~p  959 (1205)
T KOG0606|consen  883 GHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLI---AYDGHRPLTDFGTLSKVGLIPP  959 (1205)
T ss_pred             hHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhh---cccCCcccCccccccccccccC
Confidence            9999999999999988888888888899999999999999999999999999999   678899999998432110    


Q ss_pred             -----------------CC-----------CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCC
Q 043828          237 -----------------PG-----------EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAET  287 (586)
Q Consensus       237 -----------------~~-----------~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~  287 (586)
                                       ..           .......||+.|.+||.+.+ .....+|+|+.|+++++.++|.+||...+
T Consensus       960 ~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen  960 TTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred             cCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence                             00           00123578999999999864 57788999999999999999999999999


Q ss_pred             HHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHH---HHhcCCCccCCCC
Q 043828          288 EEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLE---EVLENPWIKNDNH  346 (586)
Q Consensus       288 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~---eil~hp~~~~~~~  346 (586)
                      ++.+.++|.++...++..+ ...+..+++++.++|..+|.+|..+.   ++-.||||+....
T Consensus      1040 pq~~f~ni~~~~~~~p~g~-~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~ 1100 (1205)
T KOG0606|consen 1040 PQQIFENILNRDIPWPEGP-EEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDW 1100 (1205)
T ss_pred             hhhhhhccccCCCCCCCCc-cccChhhhhhhhhhhccCchhccCcccccccccCCccCCCCc
Confidence            9999999999988777654 35788999999999999999999888   9999999997544

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.65  E-value=2.2e-15  Score=144.53  Aligned_cols=138  Identities=20%  Similarity=0.275  Sum_probs=102.9

Q ss_pred             ceec-cCCceEEEEEEEccCCcEEEEEEeecccc-----C-----ChhcHHHHHHHHHHHHhCCCCCCe--eEEEEEEEe
Q 043828           87 KELG-RGEFGITHQCFEIETGETYACKKIAKEKL-----K-----TEIDIDDVRREVEIMRHLPKHPNI--VTYKEAYED  153 (586)
Q Consensus        87 ~~lG-~G~~g~V~~~~~~~~~~~~avK~i~~~~~-----~-----~~~~~~~~~~Ei~~l~~l~~hpnI--v~l~~~~~~  153 (586)
                      ..|| .|+.|+||.+..  .+..+++|.+.....     .     .......+.+|+.++.+| .|++|  ++.+++...
T Consensus        37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L-~~~gi~vP~pl~~~~~  113 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQL-YEAGLPVPRPIAARVV  113 (239)
T ss_pred             ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHH-HhCCCCCceeEeeeee
Confidence            3576 788888888864  478899998854221     1     112235678899999999 77774  677766443


Q ss_pred             C-Ce---EEEEEeccCC-CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEee
Q 043828          154 K-DA---IYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID  228 (586)
Q Consensus       154 ~-~~---~~iv~E~~~g-g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~D  228 (586)
                      . ..   .++|||+++| .+|.+++.. ..+++..    +.+|+.+|.+||+.||+||||||.|||+   +.++.++|+|
T Consensus       114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv---~~~~~v~LID  185 (239)
T PRK01723        114 RHGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILL---DPDGKFWLID  185 (239)
T ss_pred             ecCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEE---cCCCCEEEEE
Confidence            2 22   2599999997 688877754 3455543    5789999999999999999999999999   4456899999


Q ss_pred             ccccccc
Q 043828          229 FGLSIFF  235 (586)
Q Consensus       229 fg~a~~~  235 (586)
                      ||.+...
T Consensus       186 fg~~~~~  192 (239)
T PRK01723        186 FDRGELR  192 (239)
T ss_pred             CCCcccC
Confidence            9988763

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]

Probab=99.61  E-value=8.1e-15  Score=141.35  Aligned_cols=157  Identities=19%  Similarity=0.298  Sum_probs=134.4

Q ss_pred             chhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCC-CCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhH
Q 043828          382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQK-VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDI  460 (586)
Q Consensus       382 ~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~  460 (586)
                      ..+...+++.+|+.||.+++|.++..+|...+..+..+ +..+-+..+|+.+|.|.||.++|+||...+.     ..+.+
T Consensus         9 ~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~-----~~E~~   83 (463)
T KOG0036|consen    9 DEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLD-----NKELE   83 (463)
T ss_pred             cHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHH-----HhHHH
Confidence            34555689999999999999999999999999998665 7777899999999999999999999988653     45667


Q ss_pred             HHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc--hHHHHH------H
Q 043828          461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG--ADWKMA------S  532 (586)
Q Consensus       461 ~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~--~~~~~~------F  532 (586)
                      +...|+..|.+.||.|+..|+.+.|+.+|.+.. +++++.+++.+|+++++.|+++||...+.-.  .++...      +
T Consensus        84 l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~-de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~p~s~i~di~~~W~h~  162 (463)
T KOG0036|consen   84 LYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLS-DEKAAKFFEHMDKDGKATIDLEEWRDHLLLYPESDLEDIYDFWRHV  162 (463)
T ss_pred             HHHHHhhhccccCCccCHHHHHHHHHHhCCccC-HHHHHHHHHHhccCCCeeeccHHHHhhhhcCChhHHHHHHHhhhhh
Confidence            999999999999999999999999999999877 8889999999999999999999999987654  223322      3


Q ss_pred             HhhhhhccCccc
Q 043828          533 RQYSRAMMSALS  544 (586)
Q Consensus       533 ~~~D~d~~G~i~  544 (586)
                      -.+|-..+..|.
T Consensus       163 ~~idigE~~~iP  174 (463)
T KOG0036|consen  163 LLIDIGEDAVLP  174 (463)
T ss_pred             eEEEccccccCC
Confidence            346777777776

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.61  E-value=4.5e-15  Score=132.42  Aligned_cols=133  Identities=23%  Similarity=0.242  Sum_probs=110.2

Q ss_pred             ecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCC-CCeeEEEEEEEeCCeEEEEEec
Q 043828           85 FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH-PNIVTYKEAYEDKDAIYLVMEL  163 (586)
Q Consensus        85 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~h-pnIv~l~~~~~~~~~~~iv~E~  163 (586)
                      +++.||.|.++.||++...  +..+++|.+.....     ...+..|+.+++.+..+ +++++++.++...+..+++|||
T Consensus         2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~   74 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW   74 (155)
T ss_pred             cceecccccccceEEEEec--CCeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence            4578999999999999763  37899998755432     35788999999999434 6899999998888899999999


Q ss_pred             cCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          164 CEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN---GVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       164 ~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      ++|+.+..+       +......++.+++.++.++|..   +++|+|++|.||++.   ..+.++++|||.+..
T Consensus        75 ~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~---~~~~~~l~Df~~~~~  138 (155)
T cd05120          75 IEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVD---DGKILGIIDWEYAGY  138 (155)
T ss_pred             cCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEE---CCcEEEEEecccccC
Confidence            998877543       5566777889999999999985   799999999999994   467899999998765

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]

Probab=99.57  E-value=1.7e-14  Score=139.15  Aligned_cols=128  Identities=13%  Similarity=0.208  Sum_probs=117.4

Q ss_pred             CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-hHHHHHHHh
Q 043828          456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-ADWKMASRQ  534 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-~~~~~~F~~  534 (586)
                      +.+.+++..|+.||.+++|.|+..++.+.+..+.......+....++..+|.|.||.++|.||.+.+..+ ..+.+.|..
T Consensus        11 er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~E~~l~~~F~~   90 (463)
T KOG0036|consen   11 ERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNKELELYRIFQS   90 (463)
T ss_pred             HHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHhHHHHHHHHhh
Confidence            3455789999999999999999999999999888774546778889999999999999999999999876 678899999


Q ss_pred             hhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecCC
Q 043828          535 YSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIPH  583 (586)
Q Consensus       535 ~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~~  583 (586)
                      .|.++||.|+++|+...+..+|.++++++++.+++.+|+|+++.|++.+
T Consensus        91 iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e  139 (463)
T KOG0036|consen   91 IDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEE  139 (463)
T ss_pred             hccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHH
Confidence            9999999999999999999999999999999999999999999998764

>KOG4251 consensus Calcium binding protein [General function prediction only]

Probab=99.53  E-value=1.9e-14  Score=128.65  Aligned_cols=197  Identities=16%  Similarity=0.157  Sum_probs=148.4

Q ss_pred             hHhHHHHhhhhccCCCCCCcCHHHHHHHHHhc-C--CCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhcc-------
Q 043828          385 QMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI-G--QKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKR-------  454 (586)
Q Consensus       385 ~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~-~--~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-------  454 (586)
                      ..+.+..+|.+.|.|-||+|+..|+++|+..- .  ..-..++.+-.|+.+|+|+||.|+|+||..-+...+.       
T Consensus        99 srrklmviFsKvDVNtDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskghsekeva  178 (362)
T KOG4251|consen   99 SRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEVA  178 (362)
T ss_pred             HHHHHHHHHhhcccCccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHHH
Confidence            34678999999999999999999999988642 1  1123345677899999999999999999863322111       


Q ss_pred             -------CCchhHHHHHHhhhcCCCCCcccH---------HHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHH
Q 043828          455 -------IGNDDILSQAFRFFDKNQSGFIEV---------DELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEF  518 (586)
Q Consensus       455 -------~~~~~~~~~~F~~~D~d~~G~i~~---------~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF  518 (586)
                             ....++-.+.|..-+++..|..+.         +|+..+|.+......-..-+.+++..+|.|||..++..||
T Consensus       179 dairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlSvpeF  258 (362)
T KOG4251|consen  179 DAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEF  258 (362)
T ss_pred             HHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCCCeeecchhh
Confidence                   111123345565556666666655         9999988754332222456788999999999999999999


Q ss_pred             HHHHhcc---------------hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEec
Q 043828          519 KAMMTSG---------------ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRI  581 (586)
Q Consensus       519 ~~~~~~~---------------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~  581 (586)
                      +...-..               ...++.=...|.+++|.++.+||..+...+...++..++..++.-.|.|+|.++++
T Consensus       259 islpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhDGivTaeELe~y~dP~n~~~alne~~~~ma~~d~n~~~~Ls~  336 (362)
T KOG4251|consen  259 ISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELEDYVDPQNFRLALNEVNDIMALTDANNDEKLSL  336 (362)
T ss_pred             hcCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCccceeHHHHHhhcCchhhhhhHHHHHHHHhhhccCCCcccCH
Confidence            8865432               22334445589999999999999999999999999999999999999999988764

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.44  E-value=1.5e-12  Score=119.12  Aligned_cols=143  Identities=15%  Similarity=0.116  Sum_probs=102.9

Q ss_pred             cceeccCCceEEEEEEEcc------CCcEEEEEEeecccc--C-----------------ChhcHHHHH----HHHHHHH
Q 043828           86 GKELGRGEFGITHQCFEIE------TGETYACKKIAKEKL--K-----------------TEIDIDDVR----REVEIMR  136 (586)
Q Consensus        86 ~~~lG~G~~g~V~~~~~~~------~~~~~avK~i~~~~~--~-----------------~~~~~~~~~----~Ei~~l~  136 (586)
                      ...||.|--+.||.|....      .+..+|+|+++....  +                 .......+.    +|...|+
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            4578999999999997543      357899999753211  0                 011123333    8999999


Q ss_pred             hCCCC-CCeeEEEEEEEeCCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHH-HHcCceeccCCCCceE
Q 043828          137 HLPKH-PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC-HENGVMHRDLKPENFL  214 (586)
Q Consensus       137 ~l~~h-pnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~l-H~~~ivHrDlkp~Nil  214 (586)
                      ++... -++++++.+    ...+|||||+.+..+..-......+++.....+..+++.+|..| |+.||||+||++.||+
T Consensus        82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL  157 (197)
T cd05146          82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNML  157 (197)
T ss_pred             HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence            98433 567777765    45689999997654432222233456667778889999999998 8999999999999999


Q ss_pred             eecCCCCCceEEeecccccccC
Q 043828          215 FADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       215 l~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +.    .+.+.|+|||.+....
T Consensus       158 ~~----~~~v~iIDF~qav~~~  175 (197)
T cd05146         158 WH----DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             EE----CCcEEEEECCCceeCC
Confidence            94    3579999999887653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]

Probab=99.41  E-value=1.5e-12  Score=117.12  Aligned_cols=119  Identities=18%  Similarity=0.286  Sum_probs=98.9

Q ss_pred             hHHHHHHhhhcCC-CCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCc-eeHHHHHHHHhcc-------hHHH
Q 043828          459 DILSQAFRFFDKN-QSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGR-ISFEEFKAMMTSG-------ADWK  529 (586)
Q Consensus       459 ~~~~~~F~~~D~d-~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~-i~~~eF~~~~~~~-------~~~~  529 (586)
                      ..+...|..+|.+ ++|.|+.+||..+. .+..++.    .+.++..++.+++|. |+|++|++.+..-       +.++
T Consensus        33 ~~L~~rF~kl~~~~~~g~lt~eef~~i~-~~~~Np~----~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~  107 (187)
T KOG0034|consen   33 ERLYERFKKLDRNNGDGYLTKEEFLSIP-ELALNPL----ADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLR  107 (187)
T ss_pred             HHHHHHHHHhccccccCccCHHHHHHHH-HHhcCcH----HHHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHH
Confidence            3477789999999 99999999999988 4455554    678889999988888 9999999998743       5788


Q ss_pred             HHHHhhhhhccCcccHHHHHHHHHhh-cccCC--hhh----HHHHHHhhccCCCceEecC
Q 043828          530 MASRQYSRAMMSALSIKLFKDKSMEL-TKSME--LNK----SMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       530 ~~F~~~D~d~~G~i~~~el~~~~~~~-g~~~~--~~~----~~~~~~~~d~~~dg~i~~~  582 (586)
                      -||+.||.+++|+|+.+|+..++..+ |...+  ++.    ++.+|.++|.|+||+|++.
T Consensus       108 faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~Isfe  167 (187)
T KOG0034|consen  108 FAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFE  167 (187)
T ss_pred             HHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHH
Confidence            99999999999999999999999774 55555  444    4667778999999999864

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.41  E-value=2.3e-13  Score=128.55  Aligned_cols=237  Identities=16%  Similarity=0.176  Sum_probs=157.8

Q ss_pred             EEEEEEEccCCcEEEEEEeeccccCChhc-HHHHHHHHHHHHhCCCCCCeeEEEEEEEeC-----CeEEEEEeccCCCCh
Q 043828           96 ITHQCFEIETGETYACKKIAKEKLKTEID-IDDVRREVEIMRHLPKHPNIVTYKEAYEDK-----DAIYLVMELCEGGEL  169 (586)
Q Consensus        96 ~V~~~~~~~~~~~~avK~i~~~~~~~~~~-~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~-----~~~~iv~E~~~gg~L  169 (586)
                      .||++.+...|.+++.-.+.-...+.... .+..+.-...|-.+ -|.|||+++.++.+.     ....+++||+..|+|
T Consensus        81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllql-vHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~  159 (458)
T KOG1266|consen   81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQL-VHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSL  159 (458)
T ss_pred             HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHH-HHHHHHHHHHhhcccccccccceEEEEecccchhH
Confidence            46666666666665543332111111111 11222223344456 699999999888643     457899999999999


Q ss_pred             HHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHc--CceeccCCCCceEeecCCCCCceEEeecccccccC---C--C
Q 043828          170 FDRIVN----KGHYTERAAAAVGKTILRIVKVCHEN--GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK---P--G  238 (586)
Q Consensus       170 ~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~--~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~---~--~  238 (586)
                      ..+|++    ...+......+|+.||+.||.|||+.  .|+|+++..+.|++   ..++-+|+.---......   .  .
T Consensus       160 ~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifi---q~ngLIkig~~ap~s~h~s~~~~~~  236 (458)
T KOG1266|consen  160 KQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFI---QHNGLIKIGSVAPDSTHPSVNSTRE  236 (458)
T ss_pred             HHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheee---cCCceEEecccCccccchhhhhhhH
Confidence            999875    34588888999999999999999988  59999999999999   567777765311111000   0  0


Q ss_pred             CceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCC-CCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          239 EQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPF-WAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      .......+-++|.+||.=. .+.+.++|||++|....+|..+..-- .+.+.-.....+.+..+....       ..-++
T Consensus       237 ~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~len-------~lqr~  309 (458)
T KOG1266|consen  237 AEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGLEN-------GLQRG  309 (458)
T ss_pred             hhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeeccC-------ccccC
Confidence            0111234678899998643 34566899999999999998887542 222222333334443333222       12356


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      ++.+||+..|..||++.+++.||..-+
T Consensus       310 ~i~kcl~~eP~~rp~ar~llfHpllfe  336 (458)
T KOG1266|consen  310 SITKCLEGEPNGRPDARLLLFHPLLFE  336 (458)
T ss_pred             cCcccccCCCCCCcchhhhhcCceeee
Confidence            899999999999999999999998754

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.39  E-value=7e-13  Score=139.72  Aligned_cols=150  Identities=21%  Similarity=0.296  Sum_probs=95.4

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccC---------------------C------h----hcHH
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---------------------T------E----IDID  126 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~---------------------~------~----~~~~  126 (586)
                      .+...|.. +.||.|++|.||+|+...+|+.||||++++....                     .      .    ...+
T Consensus       117 ~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~  195 (537)
T PRK04750        117 EWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEK  195 (537)
T ss_pred             HHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHH
Confidence            34556776 7899999999999998878999999999754210                     0      0    0112


Q ss_pred             HH------HHHHHHHHhCC---CCCCeeEEEEEEEe-CCeEEEEEeccCCCChHHH--HHhCC----CCCHHHHHHHHHH
Q 043828          127 DV------RREVEIMRHLP---KHPNIVTYKEAYED-KDAIYLVMELCEGGELFDR--IVNKG----HYTERAAAAVGKT  190 (586)
Q Consensus       127 ~~------~~Ei~~l~~l~---~hpnIv~l~~~~~~-~~~~~iv~E~~~gg~L~~~--l~~~~----~~~~~~~~~i~~q  190 (586)
                      .+      .+|+..+.++.   .+...+.+-.+|.+ ....+|||||+.|+.+.+.  +...+    .+.+..+..++.|
T Consensus       196 ~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q  275 (537)
T PRK04750        196 TLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ  275 (537)
T ss_pred             HHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence            22      33443333331   13333333333322 3456899999999999764  33322    2334444444444


Q ss_pred             HHHHHHHHHHcCceeccCCCCceEeecC-CCCCceEEeeccccccc
Q 043828          191 ILRIVKVCHENGVMHRDLKPENFLFADG-SENSQLKAIDFGLSIFF  235 (586)
Q Consensus       191 i~~~l~~lH~~~ivHrDlkp~Nill~~~-~~~~~vkl~Dfg~a~~~  235 (586)
                      +       ...|++|+|+||.||++..+ ...+.++++|||++...
T Consensus       276 i-------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l  314 (537)
T PRK04750        276 V-------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL  314 (537)
T ss_pred             H-------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence            4       45899999999999999532 12348999999987654

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.39  E-value=2.4e-13  Score=139.49  Aligned_cols=252  Identities=21%  Similarity=0.218  Sum_probs=185.0

Q ss_pred             cccCeeecceeccCCceEEEEEEEc-cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEI-ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ...+|..+..||.|.|+.|+.+... .++..|++|-+.........+ ..-..|+.+...+.-|.++++++..|......
T Consensus       263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~d-i~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~  341 (524)
T KOG0601|consen  263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASD-IFSLGEVILEAILGSHLPSVGKNSSWSQLRQG  341 (524)
T ss_pred             ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhh-hcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence            4567888999999999999988644 678889998876544332222 22345777777777899999998888888888


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      ||--|||.++++...+.-...+.+...+.+..|++.++.++|+..++|+|+||+||++...  .+..+++|||++..+.-
T Consensus       342 ~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~--~~~~~~~~~~~~t~~~~  419 (524)
T KOG0601|consen  342 YIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISND--GFFSKLGDFGCWTRLAF  419 (524)
T ss_pred             cCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccc--hhhhhccccccccccce
Confidence            8999999999887666555568888999999999999999999999999999999999532  27889999999864321


Q ss_pred             CCceecccCCcccc-chhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          238 GEQFCEIVGSPYYM-APEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       238 ~~~~~~~~gt~~y~-aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      ..  ....+.-++. .+|++..  .+..+.|++|||..+.+.+++...-+....   ...|..+....    .+....++
T Consensus       420 ~~--~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~---~~~i~~~~~p~----~~~~~~~~  490 (524)
T KOG0601|consen  420 SS--GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ---SLTIRSGDTPN----LPGLKLQL  490 (524)
T ss_pred             ec--ccccccccccccchhhccccccccccccccccccccccccCcccCccccc---ceeeecccccC----CCchHHhh
Confidence            11  1122333444 3555543  467799999999999999998754322211   12222332211    13345778


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCcc
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWIK  342 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~~  342 (586)
                      ..+.+.++.+++..||.+.++..|+=|.
T Consensus       491 q~~~kv~~~~~~~~~~l~~~l~~~~~~~  518 (524)
T KOG0601|consen  491 QVLLKVMINPDRKRRPSAVELSLHSEFY  518 (524)
T ss_pred             hhhhhhhcCCccccchhhhhhcccchhh
Confidence            8999999999999999999998886554

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.38  E-value=3.2e-12  Score=133.33  Aligned_cols=140  Identities=23%  Similarity=0.313  Sum_probs=94.2

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCC-h----------------------hc--------HH------HHH
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-E----------------------ID--------ID------DVR  129 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~-~----------------------~~--------~~------~~~  129 (586)
                      +.||.|++|.||+|+. .+|+.||||+.++..... .                      ..        ..      .+.
T Consensus       123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~  201 (437)
T TIGR01982       123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR  201 (437)
T ss_pred             cceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence            5799999999999975 579999999986542100 0                      00        00      233


Q ss_pred             HHHHHHHhC----CCCCCee--EEEEEEEeCCeEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHH-HHHHHHHc
Q 043828          130 REVEIMRHL----PKHPNIV--TYKEAYEDKDAIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILR-IVKVCHEN  201 (586)
Q Consensus       130 ~Ei~~l~~l----~~hpnIv--~l~~~~~~~~~~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~-~l~~lH~~  201 (586)
                      +|...+.++    .++|+|.  +++.  ...+..+|||||++|++|.+..... ....   ...++..++. .+..+|..
T Consensus       202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~--~~~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~  276 (437)
T TIGR01982       202 REAANASELGENFKNDPGVYVPEVYW--DRTSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRD  276 (437)
T ss_pred             HHHHHHHHHHHhcCCCCCEEeCCEeh--hhcCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhC
Confidence            454444444    2345433  3332  2234568999999999998776432 1222   2345555555 46788999


Q ss_pred             CceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       202 ~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      |++|+|++|.||++   ..++.++++|||++..+
T Consensus       277 g~~H~D~hPgNilv---~~~g~i~liDfG~~~~l  307 (437)
T TIGR01982       277 GFFHADLHPGNIFV---LKDGKIIALDFGIVGRL  307 (437)
T ss_pred             CceeCCCCcccEEE---CCCCcEEEEeCCCeeEC
Confidence            99999999999999   56688999999988654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.38  E-value=8.7e-12  Score=129.20  Aligned_cols=183  Identities=17%  Similarity=0.212  Sum_probs=132.9

Q ss_pred             eeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEe
Q 043828           83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVME  162 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E  162 (586)
                      |.+ +..+-++.+..-.|..+.++.++.+.++....-   ...+.+.+-++.|+.| +||||+++++.++..+.+|||+|
T Consensus        15 Y~l-e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtl-RHP~Il~yL~t~e~~~~~ylvTE   89 (690)
T KOG1243|consen   15 YDL-EETAFSSEALWPDGTRKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTL-RHPNILSYLDTTEEEGTLYLVTE   89 (690)
T ss_pred             ccc-ccccCCCcccccccceeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhc-cCchhhhhhhhhcccCceEEEee
Confidence            444 333334433222455677888999988865542   3346678889999999 89999999999999999999999


Q ss_pred             ccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH-HcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCc-
Q 043828          163 LCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH-ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ-  240 (586)
Q Consensus       163 ~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~-  240 (586)
                      -+.  .|..++.+.   +...+.--++||+.||.||| +++++|++|.-+.|++   +..|..||++|-.+........ 
T Consensus        90 rV~--Pl~~~lk~l---~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfV---n~~GeWkLggle~v~~~~~~~~~  161 (690)
T KOG1243|consen   90 RVR--PLETVLKEL---GKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFV---NESGEWKLGGLELVSKASGFNAP  161 (690)
T ss_pred             ccc--cHHHHHHHh---HHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEE---cCCCcEEEeeeEEEeccccCCcc
Confidence            885  566666654   36677778899999999997 6789999999999999   7889999999987754332211 


Q ss_pred             eecccCCccccchhhhhccCCCcchHHHHHHHHHHHhhC
Q 043828          241 FCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCG  279 (586)
Q Consensus       241 ~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g  279 (586)
                      .....---.|..|+.+... .-..|.|-|||++++++.|
T Consensus       162 ~~~~~~~~s~~~P~~~~~s-~~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  162 AKSLYLIESFDDPEEIDPS-EWSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             cccchhhhcccChhhcCcc-ccchhhhhHHHHHHHHhCc
Confidence            0011111235566544211 1346999999999999998

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.36  E-value=8.4e-12  Score=109.16  Aligned_cols=148  Identities=19%  Similarity=0.255  Sum_probs=111.2

Q ss_pred             ecceeccCCceEEEEEEEccCCcEEEEEE-----eeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           85 FGKELGRGEFGITHQCFEIETGETYACKK-----IAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        85 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~-----i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .+..|-+|+-+.|+++..  .|+.++||.     ++...+.......+..+|+.+|.++ .--.|.-..-+|.+...-.|
T Consensus        11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~-~~~GI~~P~l~~~D~~~~~i   87 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKC-RALGIPAPRLIFIDTYGGQI   87 (229)
T ss_pred             cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHH-HHhCCCCceEEEEecCCCeE
Confidence            456788999999999854  678777764     3333334444456778899999987 44455444445666677789


Q ss_pred             EEeccCC-CChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          160 VMELCEG-GELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       160 v~E~~~g-g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      +|||++| .++.+++...  ..........+++.|-..+.-||..+|+|+||..+||++.++.....+.++|||++...
T Consensus        88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen   88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS  166 (229)
T ss_pred             EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence            9999987 4677777653  23334444788999999999999999999999999999987777777899999998653

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.35  E-value=3.2e-12  Score=116.49  Aligned_cols=129  Identities=19%  Similarity=0.174  Sum_probs=95.2

Q ss_pred             cceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEeccC
Q 043828           86 GKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCE  165 (586)
Q Consensus        86 ~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~~  165 (586)
                      ++.|+.|.++.||++..  .+..|++|.......    .......|+.+++.+.+...+++++.+..  ...++||||++
T Consensus         3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~   74 (170)
T cd05151           3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE   74 (170)
T ss_pred             eeecCCcccCceEEEEE--CCeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence            35688999999999975  478899998754421    11345789999998843333556665543  34579999999


Q ss_pred             CCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCc-----eeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          166 GGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGV-----MHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       166 gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i-----vHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      |.++...        ......++.+++.+|..||..++     +|+|++|.||+++    .+.++++|||.+..
T Consensus        75 G~~l~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~----~~~~~liDf~~a~~  136 (170)
T cd05151          75 GSELLTE--------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD----DGRLWLIDWEYAGM  136 (170)
T ss_pred             CCccccc--------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE----CCeEEEEecccccC
Confidence            9887543        11123456789999999999985     9999999999994    45799999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PLN02964 phosphatidylserine decarboxylase

Probab=99.35  E-value=5.3e-12  Score=133.81  Aligned_cols=107  Identities=17%  Similarity=0.248  Sum_probs=93.0

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcC-CCCCCHHH---HHHHHHHhcCCCCCceeHHHHHHHHhcc------hHH
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDN-AGPNGDQT---IRDILRDVDLDRDGRISFEEFKAMMTSG------ADW  528 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~-~~~~~~~~---~~~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~  528 (586)
                      ++++++|..+|+|++|+|    +..+++++| ..++ +.+   ++++|+.+|.|+||.|+|+||+.++...      +++
T Consensus       143 ~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pt-e~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~seEEL  217 (644)
T PLN02964        143 ESACESFDLLDPSSSNKV----VGSIFVSCSIEDPV-ETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGNLVAANKK  217 (644)
T ss_pred             HHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCC-HHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhccCCCHHHH
Confidence            568899999999999997    888899988 4666 554   8999999999999999999999888643      669


Q ss_pred             HHHHHhhhhhccCcccHHHHHHHHHh-------------hcccCCh-hhHHHHHHh
Q 043828          529 KMASRQYSRAMMSALSIKLFKDKSME-------------LTKSMEL-NKSMELKKS  570 (586)
Q Consensus       529 ~~~F~~~D~d~~G~i~~~el~~~~~~-------------~g~~~~~-~~~~~~~~~  570 (586)
                      +.+|+.||+|++|+|+.+||++++..             +|+.++. ++++.|++.
T Consensus       218 ~eaFk~fDkDgdG~Is~dEL~~vL~~~~~~~~~~~~cp~cg~~l~~~~~~~~iiH~  273 (644)
T PLN02964        218 EELFKAADLNGDGVVTIDELAALLALQQEQEPIINNCPVCGEALGVSDKLNAMIHM  273 (644)
T ss_pred             HHHHHHhCCCCCCcCCHHHHHHHHHhcccCcchhhhchhhcCcccchhhHHHHHHH
Confidence            99999999999999999999999988             8888887 788888854

>PLN02964 phosphatidylserine decarboxylase

Probab=99.34  E-value=8.3e-12  Score=132.37  Aligned_cols=104  Identities=16%  Similarity=0.286  Sum_probs=94.2

Q ss_pred             CCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcC-CCCCHHH---HHHHHHHhcCCCCCcccHhHHHhhhhhhccC
Q 043828          380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIG-QKVSDPD---VKMLMEAADVDGNGLLSCDEFVTMSVHLKRI  455 (586)
Q Consensus       380 ~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~-~~~~~~~---~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~  455 (586)
                      .+...|++++.++|..+|.|++|.+    |..+++.+| ..+++.+   ++.+|+.+|.|++|.|+|+||+.++......
T Consensus       136 ~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~  211 (644)
T PLN02964        136 DFVTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGNL  211 (644)
T ss_pred             hccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhccC
Confidence            4556678999999999999999997    899999999 5888887   8999999999999999999999987766655


Q ss_pred             CchhHHHHHHhhhcCCCCCcccHHHHHHHHHh
Q 043828          456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLE  487 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~  487 (586)
                      ..+++++++|+.||.|++|+|+.+||..+|..
T Consensus       212 ~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~  243 (644)
T PLN02964        212 VAANKKEELFKAADLNGDGVVTIDELAALLAL  243 (644)
T ss_pred             CCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence            67888999999999999999999999999987

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.32  E-value=4.2e-11  Score=107.78  Aligned_cols=148  Identities=21%  Similarity=0.250  Sum_probs=111.3

Q ss_pred             CcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCC-CCCcccHhHHHhhhhhhcc-CCchhHHHHHHhhhcCCCCCcccHHH
Q 043828          403 DLTFEELKDGLNMIGQKVSDPDVKMLMEAADVD-GNGLLSCDEFVTMSVHLKR-IGNDDILSQAFRFFDKNQSGFIEVDE  480 (586)
Q Consensus       403 ~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d-~dg~i~~~eF~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~i~~~e  480 (586)
                      .++.+.+.++.+.  ..++..+++.+++.|=.+ .+|.++.++|..++...-. .....-...+|+.||.|+||.|+..|
T Consensus         8 ~~~~~~~e~l~~~--t~f~~~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~E   85 (193)
T KOG0044|consen    8 KLQPESLEQLVQQ--TKFSKKEIQQWYRGFKNECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLE   85 (193)
T ss_pred             cCCcHHHHHHHHh--cCCCHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHH
Confidence            3444445444433  356777888888877554 4799999999987766654 34455678899999999999999999


Q ss_pred             HHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-----------------hHHHHHHHhhhhhccCcc
Q 043828          481 LKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-----------------ADWKMASRQYSRAMMSAL  543 (586)
Q Consensus       481 l~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-----------------~~~~~~F~~~D~d~~G~i  543 (586)
                      |..+|.-...... ++-+.=.|+.+|.||||.|+++|++.++...                 +.....|+.+|+|+||.|
T Consensus        86 fi~als~~~rGt~-eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~l  164 (193)
T KOG0044|consen   86 FICALSLTSRGTL-EEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKL  164 (193)
T ss_pred             HHHHHHHHcCCcH-HHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcc
Confidence            8888876555444 6666677999999999999999998887632                 335578889999999999


Q ss_pred             cHHHHHHHHH
Q 043828          544 SIKLFKDKSM  553 (586)
Q Consensus       544 ~~~el~~~~~  553 (586)
                      +.+|+.+...
T Consensus       165 T~eef~~~~~  174 (193)
T KOG0044|consen  165 TLEEFIEGCK  174 (193)
T ss_pred             cHHHHHHHhh
Confidence            9999888753

>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.31  E-value=6.7e-12  Score=118.44  Aligned_cols=136  Identities=28%  Similarity=0.376  Sum_probs=108.7

Q ss_pred             HhHHHHhhhhccCCCCCCcCHHHHHHHHHhc-CCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh-hccCCch----h
Q 043828          386 MAQIKQMFYMMDTDKNGDLTFEELKDGLNMI-GQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH-LKRIGND----D  459 (586)
Q Consensus       386 ~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~-~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~-~~~~~~~----~  459 (586)
                      +.+-.+.|+.-|.|+||.+|.+||..+|.-- ...+..--|..-+..+|+|+||+|+++||+.-+.. .......    .
T Consensus       162 ~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~~  241 (325)
T KOG4223|consen  162 IARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVLT  241 (325)
T ss_pred             HHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCcccccc
Confidence            4566789999999999999999999988743 23333444788889999999999999999984433 3221111    1


Q ss_pred             HHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 043828          460 ILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM  522 (586)
Q Consensus       460 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~  522 (586)
                      +-.+.|...|+|+||+++.+|++..+.+-+.... +.++..++.+.|.|+||++|++|-+..+
T Consensus       242 Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A-~~EA~hL~~eaD~dkD~kLs~eEIl~~~  303 (325)
T KOG4223|consen  242 EREQFFEFRDKNKDGKLDGDELLDWILPSEQDHA-KAEARHLLHEADEDKDGKLSKEEILEHY  303 (325)
T ss_pred             cHHHHHHHhhcCCCCccCHHHHhcccCCCCccHH-HHHHHHHhhhhccCccccccHHHHhhCc
Confidence            3346778889999999999999999987777666 8889999999999999999999987654

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.30  E-value=2e-11  Score=107.54  Aligned_cols=135  Identities=23%  Similarity=0.299  Sum_probs=96.9

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeecccc-----CChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKL-----KTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~-----~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      ..+++|+-+.+|.+..  -|..+++|.=.+...     ......++-.+|..++.++ .--.|...+-++.+.....|+|
T Consensus         2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a-~~~GV~~P~v~dvD~~~~~I~m   78 (204)
T COG3642           2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKA-REAGVPVPIVYDVDPDNGLIVM   78 (204)
T ss_pred             chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHH-HHcCCCCCeEEEEcCCCCEEEE
Confidence            3578999999998844  354566664222211     1122234567899999888 4555554444555777788999


Q ss_pred             eccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          162 ELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       162 E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      ||++|-.|.+.+...       ...+++.+-..+.-||..||+|+||.++||++.    .+.+.++|||++...
T Consensus        79 e~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~----~~~i~~IDfGLg~~s  141 (204)
T COG3642          79 EYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILS----GGRIYFIDFGLGEFS  141 (204)
T ss_pred             EEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEe----CCcEEEEECCccccc
Confidence            999998888787654       245566677778889999999999999999994    345999999998753

>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]

Probab=99.20  E-value=7.3e-11  Score=115.11  Aligned_cols=190  Identities=25%  Similarity=0.340  Sum_probs=137.0

Q ss_pred             hHHHHhhhhccCCCCCCcCHHHHHHHHHhc------CC----CCC-----HHHHHH--HHHHhcCCCCCcccHhHHHhhh
Q 043828          387 AQIKQMFYMMDTDKNGDLTFEELKDGLNMI------GQ----KVS-----DPDVKM--LMEAADVDGNGLLSCDEFVTMS  449 (586)
Q Consensus       387 ~~~~~~F~~~D~~~~G~i~~~el~~~l~~~------~~----~~~-----~~~~~~--~~~~~D~d~dg~i~~~eF~~~~  449 (586)
                      ..++-+|..||.|+||.|+.+||..+.+..      |.    .++     ..++..  +..-|..+++|+++++||+..+
T Consensus       233 ~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~  312 (489)
T KOG2643|consen  233 RNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQ  312 (489)
T ss_pred             ccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCCccccHHHHHHHH
Confidence            467889999999999999999998766322      11    011     112221  2334678999999999999877


Q ss_pred             hhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCC-C-HHHHHHHHHHhcCCCCCceeHHHHHHHHhcc--
Q 043828          450 VHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-G-DQTIRDILRDVDLDRDGRISFEEFKAMMTSG--  525 (586)
Q Consensus       450 ~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~-~-~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~--  525 (586)
                      .++.    ++-++--|..+|+..+|.|+..+|..+|-....... . ...+.++-+.++.+ +-.|+++||.+...-.  
T Consensus       313 e~Lq----~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~kf~~~-~~gISl~Ef~~Ff~Fl~~  387 (489)
T KOG2643|consen  313 ENLQ----EEILELEFERFDKGDSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEKFKDD-GKGISLQEFKAFFRFLNN  387 (489)
T ss_pred             HHHH----HHHHHHHHHHhCcccccccCHHHHHHHHHHHcccchHhHHHHHHHHHHhccCC-CCCcCHHHHHHHHHHHhh
Confidence            5533    355677799999999999999999998865443222 1 22566677777766 4569999998876643  


Q ss_pred             -hHHHHHHHhhhhhccCcccHHHHHHHHHh-hcccCChhhHHHHHHhhccCCCceEecC
Q 043828          526 -ADWKMASRQYSRAMMSALSIKLFKDKSME-LTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       526 -~~~~~~F~~~D~d~~G~i~~~el~~~~~~-~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                       .++.-|-..|- .-.+.|+..+++++... .|..+++..++.++.-+|.|+||.+...
T Consensus       388 l~dfd~Al~fy~-~Ag~~i~~~~f~raa~~vtGveLSdhVvdvvF~IFD~N~Dg~LS~~  445 (489)
T KOG2643|consen  388 LNDFDIALRFYH-MAGASIDEKTFQRAAKVVTGVELSDHVVDVVFTIFDENNDGTLSHK  445 (489)
T ss_pred             hhHHHHHHHHHH-HcCCCCCHHHHHHHHHHhcCcccccceeeeEEEEEccCCCCcccHH
Confidence             44445544443 33577899999987765 5788888888888888999999988754

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=99.16  E-value=6.9e-11  Score=93.23  Aligned_cols=67  Identities=18%  Similarity=0.310  Sum_probs=59.7

Q ss_pred             hHHHHHHhhhcC-CCCCcccHHHHHHHHHh-cCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          459 DILSQAFRFFDK-NQSGFIEVDELKEVLLE-DNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       459 ~~~~~~F~~~D~-d~~G~i~~~el~~~l~~-~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      ..+..+|+.||+ +++|+|+..||+.+|.. +|...+..+++++||+.+|.|+||.|+|+||+.++...
T Consensus         8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l   76 (89)
T cd05022           8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL   76 (89)
T ss_pred             HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            458899999999 99999999999999998 77655522889999999999999999999999998753

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=99.16  E-value=1e-10  Score=87.96  Aligned_cols=63  Identities=41%  Similarity=0.691  Sum_probs=54.4

Q ss_pred             HHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCC---CHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 043828          460 ILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN---GDQTIRDILRDVDLDRDGRISFEEFKAMM  522 (586)
Q Consensus       460 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~---~~~~~~~~~~~~d~~~dg~i~~~eF~~~~  522 (586)
                      .++++|+.+|+|++|+|+.+||..++..++....   ..+.++.+++.+|.|+||.|+|+||+.+|
T Consensus         1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~   66 (66)
T PF13499_consen    1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM   66 (66)
T ss_dssp             HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred             CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence            3789999999999999999999999999886543   13456667999999999999999999875

...

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=99.15  E-value=1.7e-09  Score=108.90  Aligned_cols=212  Identities=15%  Similarity=0.213  Sum_probs=155.9

Q ss_pred             CceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEE----eCCeEEEEEeccCC-C
Q 043828           93 EFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYE----DKDAIYLVMELCEG-G  167 (586)
Q Consensus        93 ~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~----~~~~~~iv~E~~~g-g  167 (586)
                      -..+.|+|....+|..|++|++...+....   ...-.-+++++++ .|+|||++.++|.    .+..+++|++|.++ +
T Consensus       288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl-~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~  363 (655)
T KOG3741|consen  288 FSITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKL-CHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSP  363 (655)
T ss_pred             ccceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHh-ccCceeehhhhhhhhccCcceEEEEEecCCCCc
Confidence            345899999999999999999954443222   1122346788999 8999999999987    45679999999987 6


Q ss_pred             ChHHHHHh---------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          168 ELFDRIVN---------------KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       168 ~L~~~l~~---------------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                      +|.++...               +...++..+|.++.||..||.++|+.|+.-+-|.|.+|++   ..+.+++|+-.|..
T Consensus       364 TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv---~G~~RIriS~C~i~  440 (655)
T KOG3741|consen  364 TLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILV---TGKMRIRISGCGIM  440 (655)
T ss_pred             hHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEe---eCcceEEEecccce
Confidence            78776642               2347889999999999999999999999999999999999   45558899888876


Q ss_pred             cccCCCCceecccCCccccchhhhhccCCCcchHHHHHHHHHHHhhCCCCCCCCC-HHHH-HHHHHhCccCCCCCCCCCC
Q 043828          233 IFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAET-EEGI-AHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       233 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~-~~~i~~~~~~~~~~~~~~~  310 (586)
                      ....+..           .+|  +..  -.+-|.=.||.+++.|.||..--+..+ .... +..|.           +.+
T Consensus       441 Dvl~~d~-----------~~~--le~--~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I~-----------~~y  494 (655)
T KOG3741|consen  441 DVLQEDP-----------TEP--LES--QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRIT-----------TTY  494 (655)
T ss_pred             eeecCCC-----------Ccc--hhH--HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHhh-----------hhh
Confidence            6544332           111  111  124589999999999999964322221 2111 11111           347


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +.+++++|.-+...++.+ -++.+++.|
T Consensus       495 S~D~rn~v~yl~s~~~~~-ksI~~llp~  521 (655)
T KOG3741|consen  495 STDLRNVVEYLESLNFRE-KSIQDLLPM  521 (655)
T ss_pred             hHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence            889999999999988876 688888765

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=99.14  E-value=9.6e-11  Score=92.41  Aligned_cols=68  Identities=19%  Similarity=0.253  Sum_probs=61.9

Q ss_pred             hhHhHHHHhhhhccC-CCCCCcCHHHHHHHHHh-cCCCCCH-HHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          384 DQMAQIKQMFYMMDT-DKNGDLTFEELKDGLNM-IGQKVSD-PDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       384 ~~~~~~~~~F~~~D~-~~~G~i~~~el~~~l~~-~~~~~~~-~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      .-+..+.++|+.||. +++|+|+..||+.++.. +|..++. ++++.+|+.+|.|+||.|+|+||+.++..
T Consensus         5 ~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~   75 (89)
T cd05022           5 KAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGE   75 (89)
T ss_pred             HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            345789999999999 99999999999999998 8887888 99999999999999999999999886643

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]

Probab=99.11  E-value=4.4e-10  Score=92.72  Aligned_cols=147  Identities=23%  Similarity=0.436  Sum_probs=103.2

Q ss_pred             chhhHhHHHHhhhhccCC-----CCC------CcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhh
Q 043828          382 PQDQMAQIKQMFYMMDTD-----KNG------DLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSV  450 (586)
Q Consensus       382 ~~~~~~~~~~~F~~~D~~-----~~G------~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  450 (586)
                      +..++-++...|..+..+     -.|      .+..+.+. -+-.+-.++-++   ++-..+..||.|.++|++|+.++.
T Consensus        23 trKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~i~-kMPELkenpfk~---ri~e~FSeDG~GnlsfddFlDmfS   98 (189)
T KOG0038|consen   23 TRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFELIE-KMPELKENPFKR---RICEVFSEDGRGNLSFDDFLDMFS   98 (189)
T ss_pred             cHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHHHh-hChhhhcChHHH---HHHHHhccCCCCcccHHHHHHHHH
Confidence            444555566666655433     111      33343332 233334444444   444555679999999999999876


Q ss_pred             hhccCCc-hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHH----HHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          451 HLKRIGN-DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTI----RDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       451 ~~~~~~~-~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~----~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      ....... .-.+.-||+.+|-|+|++|-..+|...+..+-.+..+++++    +.+++++|.||||+++|.||..++.+.
T Consensus        99 V~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~ra  178 (189)
T KOG0038|consen   99 VFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLSFAEFEHVILRA  178 (189)
T ss_pred             HHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHhC
Confidence            5544433 34677899999999999999999999999887666556654    567889999999999999999999887


Q ss_pred             hHHHHHH
Q 043828          526 ADWKMAS  532 (586)
Q Consensus       526 ~~~~~~F  532 (586)
                      +++...|
T Consensus       179 PDFlsTF  185 (189)
T KOG0038|consen  179 PDFLSTF  185 (189)
T ss_pred             cchHhhh
Confidence            7766555

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.10  E-value=4.9e-10  Score=106.90  Aligned_cols=143  Identities=22%  Similarity=0.326  Sum_probs=102.1

Q ss_pred             ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCC-CCCeeEEEEEEEeC---CeEEEEEe
Q 043828           87 KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK-HPNIVTYKEAYEDK---DAIYLVME  162 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~-hpnIv~l~~~~~~~---~~~~iv~E  162 (586)
                      +.|+.|.++.||++... +|..+++|+.......  .....+..|+.+++.+.. +.++++++.+....   +..++|||
T Consensus         4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e   80 (223)
T cd05154           4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME   80 (223)
T ss_pred             eecCCCccceEEEEEec-CCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence            56899999999999753 3688999987654321  123567889999999843 23467777776543   36789999


Q ss_pred             ccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH------------------------------------------
Q 043828          163 LCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE------------------------------------------  200 (586)
Q Consensus       163 ~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~------------------------------------------  200 (586)
                      |++|.++...+.. ..+++.....++.+++.+|..||+                                          
T Consensus        81 ~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (223)
T cd05154          81 RVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER  159 (223)
T ss_pred             EeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence            9999888664421 345666666667777777766662                                          


Q ss_pred             --------------cCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          201 --------------NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       201 --------------~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                                    ..++|+|++|.||+++.+ ..+.+.|+||+.+..
T Consensus       160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~-~~~~~~iID~e~~~~  206 (223)
T cd05154         160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPD-EPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHHhhCCCCCCcEEEECCCCcccEEEcCC-CCcEEEEEecccccc
Confidence                          246999999999999421 145689999997764

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=99.10  E-value=1.4e-10  Score=87.34  Aligned_cols=61  Identities=33%  Similarity=0.655  Sum_probs=53.1

Q ss_pred             HHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHH----HHHHHHHhcCCCCCcccHhHHHhh
Q 043828          388 QIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPD----VKMLMEAADVDGNGLLSCDEFVTM  448 (586)
Q Consensus       388 ~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~----~~~~~~~~D~d~dg~i~~~eF~~~  448 (586)
                      +++++|+.+|.|++|+|+.+||..++..++......+    ++.+|+.+|+|+||.|+|+||+.+
T Consensus         1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~   65 (66)
T PF13499_consen    1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNF   65 (66)
T ss_dssp             HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHH
T ss_pred             CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhcc
Confidence            4789999999999999999999999999987665544    555599999999999999999875

...

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=99.09  E-value=3e-10  Score=89.84  Aligned_cols=65  Identities=22%  Similarity=0.387  Sum_probs=59.0

Q ss_pred             hHHHHHHhhhc-CCCCC-cccHHHHHHHHHh-----cCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          459 DILSQAFRFFD-KNQSG-FIEVDELKEVLLE-----DNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       459 ~~~~~~F~~~D-~d~~G-~i~~~el~~~l~~-----~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ..++++|+.|| +||+| +|+.+||+.+|+.     +|...+ +++++++++.+|.|+||.|+|+||+.++..
T Consensus         8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~-~~~v~~~i~~~D~n~dG~v~f~eF~~li~~   79 (88)
T cd05027           8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKE-QEVVDKVMETLDSDGDGECDFQEFMAFVAM   79 (88)
T ss_pred             HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCC-HHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            45899999998 89999 5999999999998     777665 888999999999999999999999998874

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=99.02  E-value=9.4e-10  Score=87.04  Aligned_cols=67  Identities=24%  Similarity=0.351  Sum_probs=61.0

Q ss_pred             hHhHHHHhhhhcc-CCCCC-CcCHHHHHHHHHh-----cCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          385 QMAQIKQMFYMMD-TDKNG-DLTFEELKDGLNM-----IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       385 ~~~~~~~~F~~~D-~~~~G-~i~~~el~~~l~~-----~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      -+..+.++|+.|| .|++| +|+.+||+.+|+.     +|..+++++++.+++.+|.|+||.|+|+||+.++..
T Consensus         6 ~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~   79 (88)
T cd05027           6 AMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAM   79 (88)
T ss_pred             HHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            3568999999998 79999 5999999999999     899899999999999999999999999999886543

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.97  E-value=1.5e-08  Score=99.67  Aligned_cols=238  Identities=18%  Similarity=0.187  Sum_probs=156.3

Q ss_pred             eecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEE------EeC-Ce
Q 043828           84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAY------EDK-DA  156 (586)
Q Consensus        84 ~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~------~~~-~~  156 (586)
                      ..++.||+|+-+.+|..-..   ...+.|++.......      -..-+..|.....||-+-.-+.|=      -+. ..
T Consensus        14 ~~gr~LgqGgea~ly~l~e~---~d~VAKIYh~Pppa~------~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~   84 (637)
T COG4248          14 PPGRPLGQGGEADLYTLGEV---RDQVAKIYHAPPPAA------QAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKV   84 (637)
T ss_pred             CCCccccCCccceeeecchh---hchhheeecCCCchH------HHHHHHHhccCCCCcchhhhhcccHHHhhCCCccce
Confidence            34567999999999976332   234568886553211      122344455555777654412221      122 23


Q ss_pred             EEEEEeccCCCCh-HHHHH------hCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeec
Q 043828          157 IYLVMELCEGGEL-FDRIV------NKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDF  229 (586)
Q Consensus       157 ~~iv~E~~~gg~L-~~~l~------~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Df  229 (586)
                      +.++|..++|..- ..++.      ......+.....+++.|+.+.+.||..|.+-+|++++|+|+   ...+.|.|+|-
T Consensus        85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lV---sd~~~V~LVds  161 (637)
T COG4248          85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLV---SDDSKVVLVDS  161 (637)
T ss_pred             eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceee---ecCceEEEEcc
Confidence            7788998887532 22221      12236678889999999999999999999999999999999   56778999885


Q ss_pred             ccccccCCCCceecccCCccccchhhhh-c-----cCCCcchHHHHHHHHHHHhhC-CCCCCCCCH-----HHHHHHHHh
Q 043828          230 GLSIFFKPGEQFCEIVGSPYYMAPEVLR-R-----NYGPEIDVWSAGVIIYILLCG-VPPFWAETE-----EGIAHAIIR  297 (586)
Q Consensus       230 g~a~~~~~~~~~~~~~gt~~y~aPE~l~-~-----~~~~~~DiwslG~il~~ll~g-~~pf~~~~~-----~~~~~~i~~  297 (586)
                      ..-....++......+|.+.|.+||... +     .-+...|-|.|||++|+++.| +.||.+...     .-....|..
T Consensus       162 Dsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~  241 (637)
T COG4248         162 DSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAH  241 (637)
T ss_pred             cceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhc
Confidence            5333323344455668999999999864 2     235678999999999998886 889854211     001112222


Q ss_pred             Ccc-----------C-CCCCCCCCCCHHHHHHHHHccCC--CCCCCCCHH
Q 043828          298 GKI-----------D-FERDPWPKVSKEAKELVKNMLDP--NPYNRLTLE  333 (586)
Q Consensus       298 ~~~-----------~-~~~~~~~~~~~~~~~li~~~L~~--dp~~Rps~~  333 (586)
                      +.+           . ....+|.-+++.+.-|..+|+..  ++.-|||++
T Consensus       242 g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~  291 (637)
T COG4248         242 GRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAK  291 (637)
T ss_pred             ceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHH
Confidence            211           1 12235667889999999999875  466899875

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.97  E-value=1.5e-08  Score=98.41  Aligned_cols=136  Identities=19%  Similarity=0.173  Sum_probs=93.2

Q ss_pred             EEEEEEEccCCcEEEEEEeeccccC----C----hhcHHHHHHHHHHHHhCCCCCCe--eEEEEEEEe-----CCeEEEE
Q 043828           96 ITHQCFEIETGETYACKKIAKEKLK----T----EIDIDDVRREVEIMRHLPKHPNI--VTYKEAYED-----KDAIYLV  160 (586)
Q Consensus        96 ~V~~~~~~~~~~~~avK~i~~~~~~----~----~~~~~~~~~Ei~~l~~l~~hpnI--v~l~~~~~~-----~~~~~iv  160 (586)
                      .|+++.  ..|+.|.||........    .    ......+.+|...+.+| ..-+|  +.++.+++.     ...-+||
T Consensus        37 rvvr~~--~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L-~~~GIptP~pVa~~e~~~~~~~~~s~LV  113 (268)
T PRK15123         37 RTLRFE--LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRL-HEVGVDTMTGVAFGERGSNPATRTSFII  113 (268)
T ss_pred             eEEEEE--ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHH-HHcCCCCCCeeEEEEecCCCccceeEEE
Confidence            345543  36778888876432211    0    01112467888887776 22222  233444432     2357899


Q ss_pred             EeccCCC-ChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeec----CCCCCceEEeeccccc
Q 043828          161 MELCEGG-ELFDRIVN--KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFAD----GSENSQLKAIDFGLSI  233 (586)
Q Consensus       161 ~E~~~gg-~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~----~~~~~~vkl~Dfg~a~  233 (586)
                      ||++++. +|.+++..  ....+......++.+++..+.-||..||+|+|+++.|||+..    +.....+.|+||+.+.
T Consensus       114 te~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        114 TEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             EeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            9999885 78888754  344667778899999999999999999999999999999963    1345789999999875


Q ss_pred             c
Q 043828          234 F  234 (586)
Q Consensus       234 ~  234 (586)
                      .
T Consensus       194 ~  194 (268)
T PRK15123        194 I  194 (268)
T ss_pred             c
Confidence            4

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.95  E-value=4.3e-10  Score=117.33  Aligned_cols=149  Identities=21%  Similarity=0.305  Sum_probs=108.4

Q ss_pred             HHHHHHHHHc-CceeccCCCCceEeecCCCCCceEEeecccccccCCCCce-----e-----cccCCccccchhhhhc-c
Q 043828          192 LRIVKVCHEN-GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF-----C-----EIVGSPYYMAPEVLRR-N  259 (586)
Q Consensus       192 ~~~l~~lH~~-~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~-----~-----~~~gt~~y~aPE~l~~-~  259 (586)
                      +.|+.|+|.. ++||++|.|++|.+   +.++..||+-|+++....+...+     .     -..-...|.|||++.. .
T Consensus       109 ~dgl~flh~sAk~VH~ni~p~~i~~---na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~  185 (700)
T KOG2137|consen  109 ADGLAFLHRSAKVVHGNIQPEAIVV---NANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTT  185 (700)
T ss_pred             cchhhhhccCcceeecccchhheee---ccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcccc
Confidence            3899999976 89999999999999   78899999999998765542111     0     1223567999999864 5


Q ss_pred             CCCcchHHHHHHHHHHHh-hCCCCCCCCCHHHHHHHHHhCccCCCC-CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          260 YGPEIDVWSAGVIIYILL-CGVPPFWAETEEGIAHAIIRGKIDFER-DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       260 ~~~~~DiwslG~il~~ll-~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .+.++|++|+||++|.+. .|...+......... ........... .....+++++++-+.++|..++..||++.+++.
T Consensus       186 ~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~-~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~  264 (700)
T KOG2137|consen  186 NTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSY-SFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLS  264 (700)
T ss_pred             ccccccceeeeeEEEEEecCCcchhhccCCcchh-hhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhhc
Confidence            678999999999999999 455544433221111 11111111111 111478999999999999999999999999999


Q ss_pred             CCCccCC
Q 043828          338 NPWIKND  344 (586)
Q Consensus       338 hp~~~~~  344 (586)
                      .|||...
T Consensus       265 ~~ff~D~  271 (700)
T KOG2137|consen  265 IPFFSDP  271 (700)
T ss_pred             ccccCCc
Confidence            9999853

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.93  E-value=5.3e-09  Score=95.58  Aligned_cols=130  Identities=18%  Similarity=0.214  Sum_probs=81.0

Q ss_pred             EEEEEEEccCCcEEEEEEeeccccC-----------------------ChhcHHHHHHHHHHHHhCCCC-CCeeEEEEEE
Q 043828           96 ITHQCFEIETGETYACKKIAKEKLK-----------------------TEIDIDDVRREVEIMRHLPKH-PNIVTYKEAY  151 (586)
Q Consensus        96 ~V~~~~~~~~~~~~avK~i~~~~~~-----------------------~~~~~~~~~~Ei~~l~~l~~h-pnIv~l~~~~  151 (586)
                      .||.|.. ..|..+|+|+.+.....                       .........+|...|.++... -++++++++.
T Consensus         1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~   79 (188)
T PF01163_consen    1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN   79 (188)
T ss_dssp             EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred             CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence            3888875 56789999987532110                       011134567899999999433 2577777552


Q ss_pred             EeCCeEEEEEeccC--CCChHHHHHhCCCCCHHHHHHHHHHHHHHHHH-HHHcCceeccCCCCceEeecCCCCCceEEee
Q 043828          152 EDKDAIYLVMELCE--GGELFDRIVNKGHYTERAAAAVGKTILRIVKV-CHENGVMHRDLKPENFLFADGSENSQLKAID  228 (586)
Q Consensus       152 ~~~~~~~iv~E~~~--gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~-lH~~~ivHrDlkp~Nill~~~~~~~~vkl~D  228 (586)
                          ..+|||||++  |..+.. +.... ++......++.+++..+.. +|..||+|+||.+.||++.   . +.+.|+|
T Consensus        80 ----~~~ivME~I~~~G~~~~~-l~~~~-~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~---~-~~~~iID  149 (188)
T PF01163_consen   80 ----RNVIVMEYIGEDGVPLPR-LKDVD-LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVD---D-GKVYIID  149 (188)
T ss_dssp             ----TTEEEEE--EETTEEGGC-HHHCG-GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEE---T-TCEEE--
T ss_pred             ----CCEEEEEecCCCccchhh-HHhcc-ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEee---c-ceEEEEe
Confidence                2369999998  655544 33321 2244566677778875544 6899999999999999995   2 2899999


Q ss_pred             cccccccC
Q 043828          229 FGLSIFFK  236 (586)
Q Consensus       229 fg~a~~~~  236 (586)
                      ||.+....
T Consensus       150 f~qav~~~  157 (188)
T PF01163_consen  150 FGQAVDSS  157 (188)
T ss_dssp             GTTEEETT
T ss_pred             cCcceecC
Confidence            99887643

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=98.93  E-value=4e-09  Score=84.95  Aligned_cols=67  Identities=21%  Similarity=0.399  Sum_probs=58.1

Q ss_pred             hhHHHHHHhhhc-CCCCC-cccHHHHHHHHHh-cCC----CCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          458 DDILSQAFRFFD-KNQSG-FIEVDELKEVLLE-DNA----GPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       458 ~~~~~~~F~~~D-~d~~G-~i~~~el~~~l~~-~~~----~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      .+.++++|+.|| +|++| +|+..||+.+|+. +|.    .++ +++++.+|..+|.|++|.|+|+||+.++...
T Consensus         8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s-~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~   81 (92)
T cd05025           8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKD-ADAVDKIMKELDENGDGEVDFQEFVVLVAAL   81 (92)
T ss_pred             HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCC-HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence            356999999997 99999 5999999999985 443    334 7889999999999999999999999998754

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=98.93  E-value=2.9e-09  Score=85.58  Aligned_cols=66  Identities=24%  Similarity=0.417  Sum_probs=56.0

Q ss_pred             hHHHHHHhhhc-CCCCC-cccHHHHHHHHHh-c----CCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          459 DILSQAFRFFD-KNQSG-FIEVDELKEVLLE-D----NAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       459 ~~~~~~F~~~D-~d~~G-~i~~~el~~~l~~-~----~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      ..+.++|..|| +||+| +|+.+||+.+|.. +    +... .+.++++++..+|.|+||.|+|+||+.++...
T Consensus        10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~-~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l   82 (93)
T cd05026          10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQK-DPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL   82 (93)
T ss_pred             HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhccccc-CHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            35788999999 78998 5999999999976 2    2223 37789999999999999999999999998754

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>smart00027 EH Eps15 homology domain

Probab=98.92  E-value=3.8e-09  Score=85.83  Aligned_cols=69  Identities=25%  Similarity=0.352  Sum_probs=63.1

Q ss_pred             CchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       381 l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      ++.+++..++++|..+|.|++|.|+.+||+.+++.++  ++.++++++|..+|.+++|.|+|+||+.++..
T Consensus         4 ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~   72 (96)
T smart00027        4 ISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHL   72 (96)
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            4678899999999999999999999999999999865  67889999999999999999999999986644

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=98.92  E-value=3.7e-09  Score=83.61  Aligned_cols=68  Identities=24%  Similarity=0.373  Sum_probs=60.7

Q ss_pred             hhHhHHHHhhhhccC-CC-CCCcCHHHHHHHHHh---cCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          384 DQMAQIKQMFYMMDT-DK-NGDLTFEELKDGLNM---IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       384 ~~~~~~~~~F~~~D~-~~-~G~i~~~el~~~l~~---~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      +.+..+.++|++||. |+ +|+|+.+||+.+|..   +|..++.+++.++|+.+|.|++|.|+|+||+.++..
T Consensus         7 ~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~   79 (88)
T cd05029           7 QAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGA   79 (88)
T ss_pred             HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence            456778999999998 77 899999999999963   688999999999999999999999999999876543

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=98.92  E-value=3.3e-09  Score=85.78  Aligned_cols=67  Identities=22%  Similarity=0.439  Sum_probs=58.3

Q ss_pred             hhHHHHHHhhhcC-CC-CCcccHHHHHHHHHh-----cCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          458 DDILSQAFRFFDK-NQ-SGFIEVDELKEVLLE-----DNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       458 ~~~~~~~F~~~D~-d~-~G~i~~~el~~~l~~-----~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      ...++.+|..||. |+ +|+|+.+||+.+|+.     +|..++ +++++.++..+|.|++|.|+|+||+.++...
T Consensus         7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s-~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~   80 (94)
T cd05031           7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKD-PMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL   80 (94)
T ss_pred             HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhcccc-HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            3568999999997 97 699999999999986     455555 8899999999999999999999999988753

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=98.88  E-value=6.1e-09  Score=83.71  Aligned_cols=68  Identities=21%  Similarity=0.302  Sum_probs=57.8

Q ss_pred             hHhHHHHhhhhcc-CCCCC-CcCHHHHHHHHHh-c----CCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh
Q 043828          385 QMAQIKQMFYMMD-TDKNG-DLTFEELKDGLNM-I----GQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL  452 (586)
Q Consensus       385 ~~~~~~~~F~~~D-~~~~G-~i~~~el~~~l~~-~----~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~  452 (586)
                      -+..+.++|+.|| .|++| +|+.+||+.++.. +    +...+..+++.+++.+|.|+||.|+|+||+.++..+
T Consensus         8 a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l   82 (93)
T cd05026           8 AMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL   82 (93)
T ss_pred             HHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            3567889999999 78998 5999999999976 2    334577899999999999999999999999876543

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=98.85  E-value=7.1e-09  Score=83.80  Aligned_cols=67  Identities=21%  Similarity=0.310  Sum_probs=59.5

Q ss_pred             hHhHHHHhhhhccC-CC-CCCcCHHHHHHHHHh-----cCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          385 QMAQIKQMFYMMDT-DK-NGDLTFEELKDGLNM-----IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       385 ~~~~~~~~F~~~D~-~~-~G~i~~~el~~~l~~-----~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      ....+.++|..||. |+ +|+|+.+||+.+|..     +|..++.++++.+++.+|.|++|.|+|+||+.++..
T Consensus         6 ~~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~   79 (94)
T cd05031           6 AMESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAG   79 (94)
T ss_pred             HHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            35679999999997 97 799999999999986     567889999999999999999999999999986643

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=98.85  E-value=8.8e-09  Score=81.48  Aligned_cols=64  Identities=20%  Similarity=0.433  Sum_probs=56.8

Q ss_pred             HHHHHHhhhcC-CC-CCcccHHHHHHHHH---hcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          460 ILSQAFRFFDK-NQ-SGFIEVDELKEVLL---EDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       460 ~~~~~F~~~D~-d~-~G~i~~~el~~~l~---~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      .+-.+|..||. || +|+|+.+||+.+|.   .+|...+ ++++.++++.+|.|++|+|+|+||+.++..
T Consensus        11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t-~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~   79 (88)
T cd05029          11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQ-DAEIAKLMEDLDRNKDQEVNFQEYVTFLGA   79 (88)
T ss_pred             HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCC-HHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence            46789999998 77 89999999999996   3676665 899999999999999999999999998874

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=98.84  E-value=9.4e-09  Score=82.75  Aligned_cols=66  Identities=24%  Similarity=0.385  Sum_probs=58.0

Q ss_pred             HhHHHHhhhhcc-CCCCCC-cCHHHHHHHHHh-cC----CCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          386 MAQIKQMFYMMD-TDKNGD-LTFEELKDGLNM-IG----QKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       386 ~~~~~~~F~~~D-~~~~G~-i~~~el~~~l~~-~~----~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      ...++++|+.|| .+++|+ |+..||+.+|+. +|    ..++.++++.+|+.+|.|++|.|+|+||+.++..
T Consensus         8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~   80 (92)
T cd05025           8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA   80 (92)
T ss_pred             HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            467999999997 999995 999999999985 43    4568899999999999999999999999986654

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

Probab=98.82  E-value=1.1e-08  Score=81.78  Aligned_cols=69  Identities=20%  Similarity=0.311  Sum_probs=60.7

Q ss_pred             hhhHhHHHHhhhhccC--CCCCCcCHHHHHHHHHh-cCCC----CCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          383 QDQMAQIKQMFYMMDT--DKNGDLTFEELKDGLNM-IGQK----VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       383 ~~~~~~~~~~F~~~D~--~~~G~i~~~el~~~l~~-~~~~----~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      +++++.++++|..||.  |++|.|+.+||..+++. +|..    ++..++..++..+|.|++|.|+|+||+.++..
T Consensus         4 ~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~   79 (88)
T cd00213           4 EKAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGK   79 (88)
T ss_pred             HHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence            4677889999999999  89999999999999976 4544    45899999999999999999999999987654

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=98.81  E-value=1.4e-08  Score=76.62  Aligned_cols=60  Identities=30%  Similarity=0.438  Sum_probs=54.6

Q ss_pred             HHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          462 SQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       462 ~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      +++|+.+|+|++|.|+.+|+..++..+|.  + .+++..++..+|.+++|.|+|+||+.++..
T Consensus         2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~--~-~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~   61 (67)
T cd00052           2 DQIFRSLDPDGDGLISGDEARPFLGKSGL--P-RSVLAQIWDLADTDKDGKLDKEEFAIAMHL   61 (67)
T ss_pred             hHHHHHhCCCCCCcCcHHHHHHHHHHcCC--C-HHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence            57899999999999999999999998764  3 788999999999999999999999998763

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.81  E-value=3.2e-10  Score=116.73  Aligned_cols=249  Identities=17%  Similarity=0.161  Sum_probs=172.0

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCC-eeEEEEEEEeCC
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN-IVTYKEAYEDKD  155 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpn-Iv~l~~~~~~~~  155 (586)
                      .....-|.....+++|+++.+++.+...+.... .+++...        ....-++++|.++ +||| .+..++-++.+.
T Consensus       238 kDk~kws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~--------l~~rl~~eLLdK~-n~P~~~v~~~~d~~~E~  307 (829)
T KOG0576|consen  238 KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT--------LSRRLAIELLDKV-NNPNPVVRYLEDYDGED  307 (829)
T ss_pred             cCCccchHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc--------hhhHHHHHHHHHc-cCCCCcccccccCCccc
Confidence            344456777788999999999998766655444 5655332        3456689999999 9999 788888888889


Q ss_pred             eEEEEEeccCCC-ChHHHH-HhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          156 AIYLVMELCEGG-ELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       156 ~~~iv~E~~~gg-~L~~~l-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                      ..+++++++.++ +....+ ...-.+.+-....+.+.-..+++++|+..=+|||    ||+..    .+..+..+|+...
T Consensus       308 ~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s----~~~~~~~~~~v~~  379 (829)
T KOG0576|consen  308 YLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGS----EEEVKLLDFAVPP  379 (829)
T ss_pred             ccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----ccccc----ccccccccccCCc
Confidence            999999999887 221111 1111233444455566667889999998888998    88873    4678999999988


Q ss_pred             ccCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCH
Q 043828          234 FFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       234 ~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      .+..........+++.|+|||+.. +.+....|.|++|+-..+|.-|.+|-..  +......+-.+.-.+....-...+.
T Consensus       380 ~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~--P~~~~~~~g~~p~s~~L~~~~aw~~  457 (829)
T KOG0576|consen  380 QLTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS--PPAVLPMIGNGPNSPMLTDKSAWSP  457 (829)
T ss_pred             ccCcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC--CccccCCCCCCCCccccchhhhcCc
Confidence            877666667788999999999775 5688889999999988888888776533  1111111111110000000001111


Q ss_pred             HHH-HHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          313 EAK-ELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       313 ~~~-~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      ... ++...|+..-|..|+....++.|.+|....
T Consensus       458 ~~~~~~~~~~~~g~P~~pkv~mgacfsKvfngCp  491 (829)
T KOG0576|consen  458 VFHRDFPAPCLNGLPPTPKVHMGACFSKVFNGCP  491 (829)
T ss_pred             ccccCCcccccCCCCCCCcchhhHHHHHHhccCc
Confidence            222 478889999999999999999999998654

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.81  E-value=2.7e-08  Score=93.34  Aligned_cols=139  Identities=21%  Similarity=0.260  Sum_probs=102.8

Q ss_pred             eeecceeccCCceEEEEEEEccCCcEEEEEEeeccc--c--------------C-C--hhcHHHHHHHHHHHHhCCCC-C
Q 043828           83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEK--L--------------K-T--EIDIDDVRREVEIMRHLPKH-P  142 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~--~--------------~-~--~~~~~~~~~Ei~~l~~l~~h-p  142 (586)
                      +.++..||.|--|.||.|.+. .|.++|+|.=+.-.  +              . +  .......++|.++|.+|..+ -
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~  171 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV  171 (304)
T ss_pred             HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence            567789999999999999864 68899999642110  0              0 0  12234678899999999433 3


Q ss_pred             CeeEEEEEEEeCCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCC
Q 043828          143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENS  222 (586)
Q Consensus       143 nIv~l~~~~~~~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~  222 (586)
                      .|++.+++    +...+||||++|-.|...     ++.......++..|+.-+..+-..||||+|+++-||++   ++++
T Consensus       172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~-----r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV---~~dg  239 (304)
T COG0478         172 KVPKPIAW----NRHAVVMEYIEGVELYRL-----RLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILV---TEDG  239 (304)
T ss_pred             CCCCcccc----ccceeeeehcccceeecc-----cCcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEE---ecCC
Confidence            67777755    556899999999766532     22455566667777777776669999999999999999   6778


Q ss_pred             ceEEeecccccc
Q 043828          223 QLKAIDFGLSIF  234 (586)
Q Consensus       223 ~vkl~Dfg~a~~  234 (586)
                      .+.++||-.+..
T Consensus       240 ~~~vIDwPQ~v~  251 (304)
T COG0478         240 DIVVIDWPQAVP  251 (304)
T ss_pred             CEEEEeCccccc
Confidence            999999976654

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.81  E-value=5.3e-08  Score=91.44  Aligned_cols=110  Identities=20%  Similarity=0.280  Sum_probs=84.5

Q ss_pred             HHHHHHHHHHHHhCCCCC--CeeEEEEEEEeC----CeEEEEEeccCCC-ChHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Q 043828          125 IDDVRREVEIMRHLPKHP--NIVTYKEAYEDK----DAIYLVMELCEGG-ELFDRIVNKGHYTERAAAAVGKTILRIVKV  197 (586)
Q Consensus       125 ~~~~~~Ei~~l~~l~~hp--nIv~l~~~~~~~----~~~~iv~E~~~gg-~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~  197 (586)
                      .....+|...+..| ..-  .+++.+.+.+..    ...++|+|++++. +|.+++......+......++.++...+.-
T Consensus        55 ~~ra~~E~~~~~~L-~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~  133 (206)
T PF06293_consen   55 RSRAKREWRNLQRL-REAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAK  133 (206)
T ss_pred             chHHHHHHHHHHHH-HHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHH
Confidence            34677788877776 222  234555555442    2458999999884 798888775557788889999999999999


Q ss_pred             HHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       198 lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      ||..||+|+|++|.|||+..++....+.++||+-+...
T Consensus       134 lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  134 LHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             HHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            99999999999999999975544568999999977653

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	586
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		5e-70
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		5e-70
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		6e-70
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		3e-67
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		5e-67
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		7e-66
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		1e-63
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		2e-60
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		3e-60
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		4e-60
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		2e-58
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		4e-58
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		6e-57
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		2e-55
3soa_A	444	Full-Length Human Camkii Length = 444		4e-55
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		4e-55
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		7e-55
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		1e-54
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		3e-54
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		3e-54
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		5e-54
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		5e-54
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		7e-54
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		1e-53
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-53
3kk8_A	284	Camkii Substrate Complex A Length = 284		2e-53
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		4e-53
3kk9_A	282	Camkii Substrate Complex B Length = 282		4e-53
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		4e-53
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-52
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		5e-52
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		1e-48
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		2e-48
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		2e-48
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		2e-48
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		3e-48
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		6e-48
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		7e-48
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		8e-48
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		1e-47
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		1e-47
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		1e-47
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		1e-47
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		1e-47
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		1e-47
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		2e-47
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		2e-47
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		2e-47
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		3e-47
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		4e-47
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		2e-46
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		3e-46
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		1e-45
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		8e-45
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		1e-44
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		1e-44
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		1e-44
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		2e-44
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		2e-44
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		2e-44
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		4e-44
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		4e-44
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		8e-44
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		2e-43
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		2e-43
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		3e-43
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		3e-43
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		6e-43
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		6e-43
2oza_A	356	Structure Of P38alpha Complex Length = 356		7e-43
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		7e-43
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		8e-43
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		8e-43
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		8e-43
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		8e-43
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		1e-42
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		2e-42
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-42
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		2e-42
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-42
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		2e-42
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		6e-42
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		7e-42
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		8e-42
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		8e-42
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		1e-41
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		1e-41
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		2e-41
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		4e-41
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		1e-40
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		1e-39
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		2e-39
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-39
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-39
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		5e-39
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		5e-39
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		7e-39
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		7e-39
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		8e-39
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		8e-39
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		2e-38
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		6e-38
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		6e-38
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		1e-37
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		1e-37
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		1e-37
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		1e-37
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		3e-37
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		3e-37
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		4e-37
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		5e-37
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-36
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		2e-36
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		2e-36
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		2e-36
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		6e-36
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		6e-36
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-35
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		3e-35
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		3e-35
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		4e-35
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		5e-35
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		8e-35
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		1e-34
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		1e-34
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		1e-34
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		1e-34
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-34
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		1e-34
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		1e-34
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		1e-34
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		2e-34
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		2e-34
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		2e-34
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		2e-34
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		2e-34
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		2e-34
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		2e-34
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		2e-34
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		3e-34
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		3e-34
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		3e-34
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		3e-34
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		4e-34
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		4e-34
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		4e-34
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		4e-34
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		8e-34
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		9e-34
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		1e-33
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		1e-33
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		1e-33
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		1e-33
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		4e-33
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		4e-33
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		7e-33
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		8e-33
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		1e-32
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		3e-32
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		8e-32
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		8e-32
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		1e-30
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		1e-30
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		5e-30
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		9e-30
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		1e-29
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-29
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		2e-29
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		3e-29
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		3e-29
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		4e-29
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		4e-29
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		4e-29
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		4e-29
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		4e-29
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		4e-29
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		4e-29
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		6e-29
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		7e-29
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		8e-29
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		9e-29
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-28
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		1e-28
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		1e-28
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		1e-28
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		1e-28
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		1e-28
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		1e-28
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-28
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		2e-28
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		2e-28
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		2e-28
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-28
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		3e-28
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		4e-28
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		4e-28
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		4e-28
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		4e-28
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		6e-28
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		6e-28
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		6e-28
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		6e-28
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		6e-28
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		6e-28
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		7e-28
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		8e-28
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		1e-27
4ae6_A	343	Structure And Function Of The Human Sperm-specific		1e-27
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		1e-27
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		1e-27
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		1e-27
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		1e-27
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-27
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		2e-27
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		2e-27
4ae9_A	343	Structure And Function Of The Human Sperm-specific		2e-27
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		2e-27
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		2e-27
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-27
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		2e-27
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		2e-27
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		2e-27
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		2e-27
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		2e-27
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		2e-27
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		2e-27
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		3e-27
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		3e-27
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		3e-27
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		3e-27
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		3e-27
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		3e-27
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		3e-27
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		3e-27
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		3e-27
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		3e-27
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		3e-27
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		4e-27
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		4e-27
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		4e-27
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		4e-27
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		4e-27
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		4e-27
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		4e-27
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		4e-27
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		4e-27
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		4e-27
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		5e-27
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		6e-27
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		6e-27
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		6e-27
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		7e-27
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		7e-27
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		8e-27
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		8e-27
4fie_A	423	Full-Length Human Pak4 Length = 423		8e-27
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		8e-27
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		9e-27
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		9e-27
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		9e-27
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-26
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		1e-26
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-26
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		2e-26
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		2e-26
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		2e-26
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		3e-26
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		4e-26
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		5e-26
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		2e-25
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		2e-25
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		3e-25
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		3e-25
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		6e-25
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		6e-25
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		6e-25
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		7e-25
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		8e-25
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		8e-25
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		8e-25
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		9e-25
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		9e-25
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		9e-25
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		9e-25
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		9e-25
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		1e-24
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		1e-24
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		1e-24
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		1e-24
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		1e-24
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		1e-24
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		1e-24
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		1e-24
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-24
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		1e-24
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		1e-24
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		2e-24
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		2e-24
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		2e-24
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		3e-24
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		3e-24
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		3e-24
2aao_A	166	Regulatory Apparatus Of Calcium Dependent Protein K		4e-24
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		4e-24
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		4e-24
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		4e-24
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		4e-24
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		5e-24
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		5e-24
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		5e-24
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		5e-24
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		6e-24
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		6e-24
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		6e-24
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		7e-24
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		7e-24
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		7e-24
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		1e-23
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		1e-23
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		1e-23
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		1e-23
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-23
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		1e-23
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		2e-23
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-23
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		3e-23
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		3e-23
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		3e-23
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		5e-23
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		5e-23
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		6e-23
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		6e-23
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		6e-23
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		6e-23
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		7e-23
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		7e-23
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		7e-23
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		7e-23
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		8e-23
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		1e-22
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		2e-22
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		2e-22
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		3e-22
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		4e-22
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		4e-22
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		5e-22
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		5e-22
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		5e-22
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		6e-22
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		2e-21
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		2e-21
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		2e-21
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		2e-21
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		2e-21
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		2e-21
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		3e-21
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		5e-21
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		7e-21
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		7e-21
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		7e-21
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		8e-21
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		9e-21
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		1e-20
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		1e-20
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		1e-20
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		1e-20
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		1e-20
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		1e-20
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		1e-20
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		1e-20
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		2e-20
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		2e-20
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		2e-20
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		2e-20
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		2e-20
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		2e-20
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		2e-20
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		2e-20
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		3e-20
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		3e-20
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		3e-20
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		3e-20
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		3e-20
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		3e-20
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		4e-20
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		5e-20
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		5e-20
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		6e-20
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		6e-20
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		6e-20
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		6e-20
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		6e-20
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		6e-20
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		6e-20
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		7e-20
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		8e-20
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		8e-20
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		8e-20
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		9e-20
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		1e-19
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		1e-19
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		1e-19
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		4e-19
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		5e-19
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		7e-19
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		1e-18
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		1e-18
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		1e-18
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		2e-18
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		2e-18
1s6i_A	188	Ca2+-Regulatory Region (Cld) From Soybean Calcium-D		2e-18
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		3e-18
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		3e-18
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		3e-18
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		3e-18
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		3e-18
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		5e-18
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		6e-18
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		7e-18
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		7e-18
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		8e-18
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		1e-17
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		2e-17
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		3e-17
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		3e-17
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		4e-17
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		4e-17
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		5e-17
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		5e-17
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		5e-17
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		6e-17
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		6e-17
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		6e-17
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		6e-17
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		6e-17
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		7e-17
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		8e-17
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		8e-17
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		8e-17
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		9e-17
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		9e-17
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		9e-17
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		9e-17
2oza_B	366	Structure Of P38alpha Complex Length = 366		9e-17
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		9e-17
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		9e-17
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		1e-16
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		1e-16
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		1e-16
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		1e-16
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		1e-16
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		1e-16
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		1e-16
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		1e-16
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		1e-16
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		1e-16
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		1e-16
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		2e-16
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		2e-16
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		2e-16
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		2e-16
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		2e-16
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		2e-16
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		2e-16
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		2e-16
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		2e-16
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		2e-16
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		2e-16
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		2e-16
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		2e-16
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		2e-16
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		2e-16
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		2e-16
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		2e-16
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		2e-16
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		2e-16
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		2e-16
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		2e-16
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		2e-16
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		2e-16
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		2e-16
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		2e-16
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		2e-16
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		2e-16
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		2e-16
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		2e-16
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		2e-16
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		2e-16
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		2e-16
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		2e-16
3hec_A	348	P38 In Complex With Imatinib Length = 348		2e-16
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		2e-16
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		2e-16
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		3e-16
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-16
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		3e-16
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-16
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		4e-16
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		4e-16
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		4e-16
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		4e-16
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		4e-16
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		5e-16
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		5e-16
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		5e-16
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		5e-16
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		5e-16
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		5e-16
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		5e-16
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		5e-16
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		5e-16
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		5e-16
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		6e-16
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		6e-16
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		6e-16
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		6e-16
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		7e-16
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		7e-16
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		7e-16
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		7e-16
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		7e-16
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		7e-16
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		8e-16
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		8e-16
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		8e-16
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		8e-16
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		8e-16
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		8e-16
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		8e-16
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		8e-16
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		8e-16
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		8e-16
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		8e-16
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		9e-16
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		9e-16
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		9e-16
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		1e-15
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		1e-15
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		1e-15
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		1e-15
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-15
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		1e-15
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		1e-15
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		1e-15
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		1e-15
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		1e-15
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		1e-15
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		1e-15
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		1e-15
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		1e-15
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		1e-15
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		1e-15
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-15
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		1e-15
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		2e-15
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		2e-15
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		2e-15
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		2e-15
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		2e-15
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		2e-15
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		2e-15
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-15
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-15
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		2e-15
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-15
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-15
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		2e-15
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-15
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		3e-15
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		8e-15
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		1e-14
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		1e-14
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-14
4exu_A	371	Mapk13, Inactive Form Length = 371		1e-14
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		1e-14
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		2e-14
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		2e-14
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		2e-14
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		2e-14
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-14
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		2e-14
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		3e-14
3a7f_A	303	Human Mst3 Kinase Length = 303		3e-14
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		3e-14
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		3e-14
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		3e-14
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		3e-14
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		4e-14
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		4e-14
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		5e-14
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		5e-14
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		5e-14
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		5e-14
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		6e-14
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		6e-14
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		6e-14
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		6e-14
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		6e-14
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		7e-14
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		7e-14
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		7e-14
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		7e-14
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		8e-14
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		8e-14
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		8e-14
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		8e-14
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		8e-14
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		9e-14
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		9e-14
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		9e-14
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		9e-14
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		9e-14
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		1e-13
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		1e-13
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		1e-13
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		1e-13
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		1e-13
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		1e-13
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		1e-13
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		2e-13
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-13
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		2e-13
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-13
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		2e-13
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		2e-13
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-13
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		2e-13
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		2e-13
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		3e-13
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		3e-13
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		3e-13
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		3e-13
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		3e-13
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-13
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		4e-13
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		4e-13
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		4e-13
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		4e-13
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		5e-13
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		5e-13
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		5e-13
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		5e-13
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		5e-13
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		5e-13
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		5e-13
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		5e-13
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		5e-13
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		5e-13
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		5e-13
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		6e-13
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		6e-13
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		7e-13
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		9e-13
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		1e-12
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		1e-12
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		1e-12
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		1e-12
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		1e-12
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		1e-12
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		1e-12
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		1e-12
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		1e-12
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		1e-12
1s6j_A	87	N-Terminal Region Of The Ca2+-Saturated Calcium Reg		1e-12
2z2w_A	285	Humand Wee1 Kinase Complexed With Inhibitor Pf03357		1e-12
3bi6_A	287	Wee1 Kinase Complex With Inhibitor Pd352396 Length		1e-12
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		1e-12
2in6_A	287	Wee1 Kinase Complex With Inhibitor Pd311839 Length		2e-12
4h58_A	275	Braf In Complex With Compound 3 Length = 275		2e-12
1x8b_A	289	Structure Of Human Wee1a Kinase: Kinase Domain Comp		2e-12
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		2e-12
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		2e-12
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		2e-12
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		2e-12
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		2e-12
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		3e-12
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		3e-12
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		3e-12
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		3e-12
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		3e-12
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		3e-12
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		4e-12
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-12
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		4e-12
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		5e-12
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		5e-12
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		6e-12
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		6e-12
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		6e-12
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		6e-12
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		6e-12
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		7e-12
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		7e-12
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		8e-12
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		8e-12
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		9e-12
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		1e-11
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		1e-11
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		1e-11
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		1e-11
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		1e-11
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		1e-11
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		2e-11
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		2e-11
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		2e-11
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-11
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-11
1rfj_A	149	Crystal Structure Of Potato Calmodulin Pcm6 Length		2e-11
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		2e-11
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		3e-11
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		3e-11
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-11
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-11
2bkh_B	149	Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc		3e-11
2vb6_B	149	Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigo		3e-11
1ooj_A	149	Structural Genomics Of Caenorhabditis Elegans : Cal		3e-11
2lv6_A	148	The Complex Between Ca-calmodulin And Skeletal Musc		4e-11
2bbm_A	148	Solution Structure Of A Calmodulin-Target Peptide C		4e-11
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		4e-11
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		4e-11
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		4e-11
4aqr_A	149	Crystal Structure Of A Calmodulin In Complex With T		4e-11
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		4e-11
3b2t_A	311	Structure Of Phosphotransferase Length = 311		4e-11
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		4e-11
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		4e-11
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		4e-11
2f2o_A	179	Structure Of Calmodulin Bound To A Calcineurin Pept		4e-11
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		5e-11
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		6e-11
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		6e-11
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		6e-11
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		6e-11
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		6e-11
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		6e-11
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		7e-11
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		7e-11
4djc_A	152	1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCA		7e-11
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		7e-11
2ygg_B	150	Complex Of Cambr And Cam Length = 150		7e-11
1iq5_A	149	CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE		8e-11
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		8e-11
2wel_D	150	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		8e-11
1dmo_A	148	Calmodulin, Nmr, 30 Structures Length = 148		8e-11
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		9e-11
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		9e-11
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		9e-11
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		9e-11
2be6_A	150	2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaC		9e-11
3ewt_A	154	Crystal Structure Of Calmodulin Complexed With A Pe		9e-11
1cm1_A	148	Motions Of Calmodulin-Single-Conformer Refinement L		9e-11
1xfu_O	149	Crystal Structure Of Anthrax Edema Factor (ef) Trun		9e-11
3sg2_A	449	Crystal Structure Of Gcamp2-T116v,D381y Length = 44		9e-11
3evr_A	411	Crystal Structure Of Calcium Bound Monomeric Gcamp2		9e-11
3o78_A	415	The Structure Of Ca2+ Sensor (Case-12) Length = 415		9e-11
1prw_A	149	Crystal Structure Of Bovine Brain Ca++ Calmodulin I		9e-11
1up5_B	148	Chicken Calmodulin Length = 148		9e-11
1cdl_A	147	Target Enzyme Recognition By Calmodulin: 2.4 Angstr		9e-11
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-10
3o77_A	415	The Structure Of Ca2+ Sensor (Case-16) Length = 415		1e-10
3ek8_A	449	Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER L		1e-10
3evu_A	449	Crystal Structure Of Calcium Bound Dimeric Gcamp2,		1e-10
2buj_A	317	Crystal Structure Of The Human Serine-Threonine Kin		1e-10
3sg6_A	450	Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) L		1e-10
3ekh_A	449	Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER		1e-10
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		1e-10
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		1e-10
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-10
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		1e-10
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		1e-10
1ahr_A	146	Calmodulin Mutant With A Two Residue Deletion In Th		1e-10
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-10
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-10
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-10
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		1e-10
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		1e-10
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		2e-10
2lhi_A	176	Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam L		2e-10
2lhh_A	128	Solution Structure Of Ca2+-Bound Ycam Length = 128		2e-10
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		2e-10
1vrk_A	148	The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20		2e-10
1qtx_A	148	The 1.65 Angstrom Structure Of Calmodulin Rs20 Pept		2e-10
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		3e-10
3sg5_A	448	Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linke		3e-10
3sg4_A	448	Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Len		3e-10
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		3e-10
1ggz_A	148	Crystal Structure Of The Calmodulin-Like Protein (H		3e-10
3sg3_A	449	Crystal Structure Of Gcamp3-D380y Length = 449		3e-10
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		3e-10
1lkj_A	146	Nmr Structure Of Apo Calmodulin From Yeast Saccharo		3e-10
2k0j_A	148	Solution Structure Of Cam Complexed To Drp1p Length		3e-10
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		3e-10
2ix7_A	145	Structure Of Apo-Calmodulin Bound To Unconventional		3e-10
3u0k_A	440	Crystal Structure Of The Genetically Encoded Calciu		3e-10
3sg7_A	448	Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 4		3e-10
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		4e-10
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		4e-10
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		5e-10
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		5e-10
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		5e-10
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		5e-10
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		5e-10
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		5e-10
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		5e-10
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		6e-10
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		6e-10
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		6e-10
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		6e-10
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		6e-10
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		6e-10
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		6e-10
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		6e-10
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		7e-10
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		8e-10
2l1w_A	149	The Solution Structure Of Soybean Calmodulin Isofor		9e-10
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		9e-10
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		9e-10
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		1e-09
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		1e-09
1cdm_A	144	Modulation Of Calmodulin Plasticity In Molecular Re		1e-09
2vay_A	146	Calmodulin Complexed With Cav1.1 Iq Peptide Length		1e-09
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		1e-09
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		1e-09
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		1e-09
4gow_D	144	Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX		1e-09
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		1e-09
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		1e-09
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-09
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-09
4ds7_A	147	Crystal Structure Of Yeast Calmodulin Bound To The		1e-09
2pzi_A	681	Crystal Structure Of Protein Kinase Pkng From Mycob		1e-09
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		1e-09
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		1e-09
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		1e-09
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-09
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		2e-09
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		2e-09
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-09
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		2e-09
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		2e-09
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		2e-09
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		2e-09
1qs7_A	145	The 1.8 Angstrom Structure Of Calmodulin Rs20 Pepti		2e-09
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-09
1y0v_H	146	Crystal Structure Of Anthrax Edema Factor (Ef) In C		3e-09
1deg_A	142	The Linker Of Des-Glu84 Calmodulin Is Bent As Seen		3e-09
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		3e-09
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		3e-09
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		3e-09
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		3e-09
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		3e-09
1k93_D	144	Crystal Structure Of The Adenylyl Cyclase Domain Of		4e-09
1xfx_O	149	Crystal Structure Of Anthrax Edema Factor (Ef) In C		4e-09
1niw_A	148	Crystal Structure Of Endothelial Nitric Oxide Synth		4e-09
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		4e-09
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		4e-09
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		4e-09
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		5e-09
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		5e-09
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		5e-09
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		5e-09
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		5e-09
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		5e-09
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		6e-09
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		6e-09
2bl0_C	142	Physarum Polycephalum Myosin Ii Regulatory Domain L		6e-09
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		7e-09
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		7e-09
1tnw_A	162	Nmr Solution Structure Of Calcium Saturated Skeleta		8e-09
1a2x_A	159	Complex Of Troponin C With A 47 Residue (1-47) Frag		8e-09
2w49_0	159	Isometrically Contracting Insect Asynchronous Fligh		8e-09
1ytz_C	162	Crystal Structure Of Skeletal Muscle Troponin In Th		8e-09
4tnc_A	162	Refined Structure Of Chicken Skeletal Muscle Tropon		9e-09
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		9e-09
1exr_A	148	The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Ca		1e-08
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		1e-08
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		1e-08
1tcf_A	159	Crystal Structure Of Calcium-Saturated Rabbit Skele		1e-08
5tnc_A	162	Refined Crystal Structure Of Troponin C From Turkey		1e-08
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		1e-08
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		1e-08
3pm8_A	197	Cad Domain Of Pff0520w, Calcium Dependent Protein K		2e-08
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		2e-08
1y6w_A	148	Trapped Intermediate Of Calmodulin Length = 148		2e-08
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		2e-08
1clm_A	148	Structure Of Paramecium Tetraurelia Calmodulin At 1		2e-08
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		2e-08
3ekj_A	449	Calcium-Free Gcamp2 (Calcium Binding Deficient Muta		2e-08
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		3e-08
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		3e-08
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		3e-08
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		3e-08
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		5e-08
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		5e-08
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-08
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		5e-08
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		5e-08
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		5e-08
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		6e-08
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		7e-08
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		7e-08
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		7e-08
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		8e-08
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		8e-08
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-07
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-07
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		1e-07
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-07
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		1e-07
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		1e-07
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		1e-07
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		1e-07
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		1e-07
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		1e-07
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		1e-07
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		1e-07
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-07
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		1e-07
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		1e-07
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-07
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		1e-07
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		1e-07
3ifk_A	90	Crystal Structure Of Calcium-Saturated Calmodulin N		2e-07
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		2e-07
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		2e-07
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		2e-07
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		2e-07
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		2e-07
3qrx_A	169	Chlamydomonas Reinhardtii Centrin Bound To Melittin		2e-07
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-07
3sv0_A	483	Crystal Structure Of Casein Kinase-1 Like Protein I		3e-07
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		4e-07
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		5e-07
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		5e-07
3k21_A	191	Crystal Structure Of Carboxy-Terminus Of Pfc0420w L		6e-07
3uys_A	296	Crystal Structure Of Apo Human Ck1d Length = 296		7e-07
3l19_A	214	Crystal Structure Of Calcium Binding Domain Of Cpcd		7e-07
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		7e-07
1ckj_A	317	Casein Kinase I Delta Truncation Mutant Containing		8e-07
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		8e-07
1fvr_A	327	Tie2 Kinase Domain Length = 327		8e-07
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		1e-06
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		1e-06
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		1e-06
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		1e-06
4hni_A	296	Crystal Structure Of Ck1e In Complex With Pf4800567		2e-06
3b32_A	75	Crystal Structure Of Calcium-Saturated Calmodulin N		2e-06
1ak8_A	76	Nmr Solution Structure Of Cerium-Loaded Calmodulin		2e-06
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		2e-06
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		2e-06
2lqc_A	77	Nmr Solution Structure Of A Ca2+-Calmodulin With A		2e-06
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		2e-06
1f70_A	76	Refined Solution Structure Of Calmodulin N-Terminal		2e-06
3uct_A	79	Structure Of Mn2+-Bound N-Terminal Domain Of Calmod		3e-06
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		3e-06
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		3e-06
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		3e-06
2llo_A	80	Solution Nmr-Derived Structure Of Calmodulin N-Lobe		3e-06
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		4e-06
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		4e-06
1f54_A	77	Solution Structure Of The Apo N-Terminal Domain Of		4e-06
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		4e-06
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		4e-06
2kn2_A	92	Solution Structure Of The C-Terminal Domain Of Soyb		4e-06
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		5e-06
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		5e-06
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		5e-06
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		5e-06
2lv7_A	100	Solution Structure Of Ca2+-Bound Cabp7 N-Terminal D		6e-06
2joj_A	77	Nmr Solution Structure Of N-Terminal Domain Of Eupl		6e-06
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		6e-06
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		8e-06
1j7o_A	76	Solution Structure Of Calcium-calmodulin N-terminal		8e-06
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		9e-06
2pl0_A	289	Lck Bound To Imatinib Length = 289		1e-05
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		1e-05
3gni_B	389	Structure Of Strad And Mo25 Length = 389		1e-05
3a4o_X	286	Lyn Kinase Domain Length = 286		1e-05
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		1e-05
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		1e-05
2wtk_B	373	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		1e-05
1sw8_A	79	Solution Structure Of The N-Terminal Domain Of Huma		1e-05
2lmt_A	148	Nmr Structure Of Androcam Length = 148		1e-05
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		1e-05
3o4y_A	196	Crystal Structure Of Cad Domain Of The Plasmodium V		1e-05
1zot_B	69	Crystal Structure Analysis Of The CyaaC-Cam With Pm		1e-05
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		1e-05
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		1e-05
3kf9_A	149	Crystal Structure Of The SdcenSKMLCK COMPLEX Length		1e-05
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		1e-05
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		1e-05
2col_B	67	Crystal Structure Analysis Of CyaaC-Cam With Pyroph		1e-05
1fw4_A	71	Crystal Structure Of E. Coli Fragment Tr2c From Cal		1e-05
2rob_A	70	Solution Structure Of Calcium Bound Soybean Calmodu		1e-05
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		1e-05
1f71_A	67	Refined Solution Structure Of Calmodulin C-Terminal		2e-05
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		2e-05
1yru_B	74	Crystal Structure Analysis Of The Adenylyl Cyclaes		2e-05
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		2e-05
1cmf_A	73	Nmr Solution Structure Of Apo Calmodulin Carboxy-Te		2e-05

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score =  262 bits (669), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 148/411 (36%), Positives = 233/411 (56%), Gaps = 16/411 (3%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D+Y   + LG+G FG    C +  TG+  A K I+K ++K + D + + REV++++ L  
Sbjct: 49  DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD- 107
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HPNI+   E +EDK   YLV E+  GGELFD I+++  ++E  AA + + +L  +   H+
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 167
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNY 260
           N ++HRDLKPEN L    S+++ ++ IDFGLS  F+  ++  + +G+ YY+APEVL   Y
Sbjct: 168 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTY 227
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
             + DVWS GVI+YILL G PPF    E  I   + +GK  FE   W KVS+ AK+L++ 
Sbjct: 228 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 287
Query: 321 MLDPNPYNRLTLEEVLENPWIKN---DNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVV 377
           ML   P  R++  + L++ WI+    +  + +V    N    I+QF    K  +  L  +
Sbjct: 288 MLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYM 347
Query: 378 ADNL-PQDQMAQIKQMFYMMDTDKNGDLTFEELKDG----LNMIGQKVS-------DPDV 425
              L  QD+  ++  +F+ MD + +G L   EL +G    + M GQ  S       + +V
Sbjct: 348 GSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEV 407
Query: 426 KMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
             +++A D D NG +   EFVT+++  K + + + L +AFR FD + SG I
Sbjct: 408 DQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKI 458

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score =  261 bits (668), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 148/411 (36%), Positives = 233/411 (56%), Gaps = 16/411 (3%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D+Y   + LG+G FG    C +  TG+  A K I+K ++K + D + + REV++++ L  
Sbjct: 50  DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD- 108
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HPNI+   E +EDK   YLV E+  GGELFD I+++  ++E  AA + + +L  +   H+
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 168
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNY 260
           N ++HRDLKPEN L    S+++ ++ IDFGLS  F+  ++  + +G+ YY+APEVL   Y
Sbjct: 169 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTY 228
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
             + DVWS GVI+YILL G PPF    E  I   + +GK  FE   W KVS+ AK+L++ 
Sbjct: 229 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 288
Query: 321 MLDPNPYNRLTLEEVLENPWIKN---DNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVV 377
           ML   P  R++  + L++ WI+    +  + +V    N    I+QF    K  +  L  +
Sbjct: 289 MLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYM 348
Query: 378 ADNL-PQDQMAQIKQMFYMMDTDKNGDLTFEELKDG----LNMIGQKVS-------DPDV 425
              L  QD+  ++  +F+ MD + +G L   EL +G    + M GQ  S       + +V
Sbjct: 349 GSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEV 408
Query: 426 KMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
             +++A D D NG +   EFVT+++  K + + + L +AFR FD + SG I
Sbjct: 409 DQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKI 459

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score =  261 bits (668), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 148/411 (36%), Positives = 233/411 (56%), Gaps = 16/411 (3%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D+Y   + LG+G FG    C +  TG+  A K I+K ++K + D + + REV++++ L  
Sbjct: 26  DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD- 84
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HPNI+   E +EDK   YLV E+  GGELFD I+++  ++E  AA + + +L  +   H+
Sbjct: 85  HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 144
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNY 260
           N ++HRDLKPEN L    S+++ ++ IDFGLS  F+  ++  + +G+ YY+APEVL   Y
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTY 204
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
             + DVWS GVI+YILL G PPF    E  I   + +GK  FE   W KVS+ AK+L++ 
Sbjct: 205 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 264
Query: 321 MLDPNPYNRLTLEEVLENPWIKN---DNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVV 377
           ML   P  R++  + L++ WI+    +  + +V    N    I+QF    K  +  L  +
Sbjct: 265 MLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYM 324
Query: 378 ADNL-PQDQMAQIKQMFYMMDTDKNGDLTFEELKDG----LNMIGQKVS-------DPDV 425
              L  QD+  ++  +F+ MD + +G L   EL +G    + M GQ  S       + +V
Sbjct: 325 GSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEV 384
Query: 426 KMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
             +++A D D NG +   EFVT+++  K + + + L +AFR FD + SG I
Sbjct: 385 DQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKI 435

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score =  253 bits (645), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 148/412 (35%), Positives = 227/412 (55%), Gaps = 17/412 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D+Y   K+LG G +G    C +  TG   A K I K  + T  +   +  EV +++ L  
Sbjct: 4   DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD- 62
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HPNI+   E +EDK   YLVME+  GGELFD I+ +  ++E  AA + K +L      H+
Sbjct: 63  HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK 122
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNY 260
           + ++HRDLKPEN L    S ++ +K +DFGLS  F+ G +  E +G+ YY+APEVLR+ Y
Sbjct: 123 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKY 182
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
             + DVWS GVI+YILLCG PPF  +T++ I   + +GK  F+   W +VS EAK+LVK 
Sbjct: 183 DEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKL 242
Query: 321 MLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTS----RIKQFSIMNKFKKKVLRV 376
           ML   P  R++ EE L +PWI       +  +G +  +     +K+F    K  +  +  
Sbjct: 243 MLTYEPSKRISAEEALNHPWIVKFCSQKHTDVGKHALTGALGNMKKFQSSQKLAQAAMLF 302
Query: 377 VADNLPQ-DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI----GQKVSDPD------- 424
           +   L   ++  ++ Q+F  +D + +G L  +EL +G   +    G  VSD D       
Sbjct: 303 MGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAE 362
Query: 425 VKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
           V  ++++ D D NG +   EFVT+ +  + + + + L  AF+ FD + SG I
Sbjct: 363 VDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKI 414

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score =  252 bits (643), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 146/411 (35%), Positives = 226/411 (54%), Gaps = 16/411 (3%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D+Y   + LG+G FG    C +  TG+  A K I+K ++K + D + + REV++++ L  
Sbjct: 26  DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD- 84
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HPNI    E +EDK   YLV E+  GGELFD I+++  ++E  AA + + +L  +   H+
Sbjct: 85  HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHK 144
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNY 260
           N ++HRDLKPEN L    S+++ ++ IDFGLS  F+  ++  + +G+ YY+APEVL   Y
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTY 204
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
             + DVWS GVI+YILL G PPF    E  I   + +GK  FE   W KVS+ AK+L++ 
Sbjct: 205 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 264
Query: 321 MLDPNPYNRLTLEEVLENPWIKN---DNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVV 377
            L   P  R++  + L++ WI+    +  + +V    N    I+QF    K  +  L   
Sbjct: 265 XLTYVPSXRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYX 324
Query: 378 ADNL-PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI----GQKVSDPD-------V 425
              L  QD+  ++  +F+  D + +G L   EL +G   +    GQ  S  D       V
Sbjct: 325 GSKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEV 384
Query: 426 KMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
             +++A D D NG +   EFVT++   K + + + L +AFR FD + SG I
Sbjct: 385 DQVLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKI 435

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score =  248 bits (633), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 146/421 (34%), Positives = 227/421 (53%), Gaps = 23/421 (5%)
Query: 76  EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           +G   ++Y     LG+G FG   +C +  T + YA K I K   K + D   + REVE++
Sbjct: 17  QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELL 75
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
           + L  HPNI+   E  ED  + Y+V EL  GGELFD I+ +  ++E  AA + K +   +
Sbjct: 76  KKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGI 134
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
              H++ ++HRDLKPEN L     ++  +K IDFGLS  F+   +  + +G+ YY+APEV
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
Query: 256 LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
           LR  Y  + DVWSAGVI+YILL G PPF+ + E  I   +  GK  F+   W  +S +AK
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWI-KNDNHAPNVSLGGNVTS---RIKQFSIMNKFKK 371
           +L++ ML  +P  R+T  + LE+PWI K  +  P +S   ++ S    I+QF    K  +
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQ 314
Query: 372 KVLRVVADNLPQ-DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI-------------- 416
             L  +A  L   D+  Q+ ++F  +DT+ +G L  +EL  G +                
Sbjct: 315 AALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQN 374
Query: 417 -GQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGF 475
            G  + D  +  LM   D+DG+G +   EF+  ++    + + + + +AF+ FDK+ SG 
Sbjct: 375 EGSTIEDQ-IDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGK 433
Query: 476 I 476
           I
Sbjct: 434 I 434

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score =  241 bits (614), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 143/414 (34%), Positives = 234/414 (56%), Gaps = 15/414 (3%)
Query: 76  EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           +G++ + Y   K+LG G +G    C +  T    A K I K  + T  +   +  EV ++
Sbjct: 32  KGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSN-SKLLEEVAVL 90
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
           + L  HPNI+   + +EDK   YLVME  +GGELFD I+++  + E  AA + K +L  V
Sbjct: 91  K-LLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGV 149
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
              H++ ++HRDLKPEN L     +++ +K +DFGLS  F+  ++  E +G+ YY+APEV
Sbjct: 150 TYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV 209
Query: 256 LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
           LR+ Y  + DVWS GVI++ILL G PPF  +T++ I   + +GK  F+   W  VS+ AK
Sbjct: 210 LRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAK 269
Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIKN--DNHAPNVSLG--GNVTSRIKQFSIMNKFKK 371
           +L+K ML  +   R++ ++ LE+PWIK         + L    N    +++F    K  +
Sbjct: 270 DLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQ 329
Query: 372 KVLRVVADNL-PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI-GQKVS-------D 422
             L  +A  L  Q++  ++  +F  +D + +G L  +EL DG + + G++V+       +
Sbjct: 330 AALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIE 389
Query: 423 PDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
            +V  ++ AAD D NG +   EFVT+++  K + + D L  AF+ FD++ +G I
Sbjct: 390 SEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKI 443

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score =  230 bits (586), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 120/268 (44%), Positives = 163/268 (60%), Gaps = 4/268 (1%)
Query: 75  AEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI 134
            +G+I   YT    +GRG +G      +  T    A KKI K  ++   D+D  ++E+EI
Sbjct: 20  TKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQEIEI 76
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           M+ L  HPNI+   E +ED   IYLVMELC GGELF+R+V+K  + E  AA + K +L  
Sbjct: 77  MKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA 135
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           V  CH+  V HRDLKPENFLF   S +S LK IDFGL+  FKPG+     VG+PYY++P+
Sbjct: 136 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ 195
Query: 255 VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           VL   YGPE D WSAGV++Y+LLCG PPF A T+  +   I  G   F    W  VS +A
Sbjct: 196 VLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQA 255
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIK 342
           + L++ +L  +P  R+T  + LE+ W +
Sbjct: 256 ESLIRRLLTKSPKQRITSLQALEHEWFE 283

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score =  229 bits (585), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 120/268 (44%), Positives = 163/268 (60%), Gaps = 4/268 (1%)
Query: 75  AEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI 134
            +G+I   YT    +GRG +G      +  T    A KKI K  ++   D+D  ++E+EI
Sbjct: 3   TKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQEIEI 59
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           M+ L  HPNI+   E +ED   IYLVMELC GGELF+R+V+K  + E  AA + K +L  
Sbjct: 60  MKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA 118
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           V  CH+  V HRDLKPENFLF   S +S LK IDFGL+  FKPG+     VG+PYY++P+
Sbjct: 119 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQ 178
Query: 255 VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           VL   YGPE D WSAGV++Y+LLCG PPF A T+  +   I  G   F    W  VS +A
Sbjct: 179 VLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQA 238
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIK 342
           + L++ +L  +P  R+T  + LE+ W +
Sbjct: 239 ESLIRRLLTKSPKQRITSLQALEHEWFE 266

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score =  229 bits (584), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 143/446 (32%), Positives = 235/446 (52%), Gaps = 33/446 (7%)
Query: 60  KKSISFQLRSVVSNPA------EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKK 113
           ++++ FQ   +  NP       EG I + Y   ++LG G +G    C E       A K 
Sbjct: 11  RENLYFQ--GIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKV 68
Query: 114 IAKEKLKTEIDIDD----------VRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMEL 163
           I K +       DD          +  E+ +++ L  HPNI+   + +EDK   YLV E 
Sbjct: 69  IKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLD-HPNIIKLFDVFEDKKYFYLVTEF 127
Query: 164 CEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQ 223
            EGGELF++I+N+  + E  AA + K IL  +   H++ ++HRD+KPEN L  + +    
Sbjct: 128 YEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLN 187
Query: 224 LKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPF 283
           +K +DFGLS FF    +  + +G+ YY+APEVL++ Y  + DVWS GVI+YILLCG PPF
Sbjct: 188 IKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPF 247
Query: 284 WAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK- 342
             + ++ I   + +GK  F+ + W  +S EAKEL+K ML  +   R T EE L + WIK 
Sbjct: 248 GGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKK 307
Query: 343 ---NDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQ-DQMAQIKQMFYMMDT 398
              N N +   +L G   S +++F    K  +  +  +   L   ++  ++  +F  +D 
Sbjct: 308 YANNINKSDQKTLCG-ALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDK 366
Query: 399 DKNGDLTFEELKDGLNMIGQ--------KVSDPDVKMLMEAADVDGNGLLSCDEFVTMSV 450
           + +G L  +EL +G N++          K  + +V  +++  D D NG +   EF+++ +
Sbjct: 367 NGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCM 426
Query: 451 HLKRIGNDDILSQAFRFFDKNQSGFI 476
             + + +++ L +AF  FD ++SG I
Sbjct: 427 DKQILFSEERLRRAFNLFDTDKSGKI 452

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score =  223 bits (569), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 119/299 (39%), Positives = 174/299 (58%), Gaps = 4/299 (1%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           ++ D+Y   +ELG+G F +  +C +I TG+ YA K I  +KL    D   + RE  I R 
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR-DHQKLEREARICRL 59
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
           L KHPNIV   ++  ++   YLV +L  GGELF+ IV + +Y+E  A+   + IL  V  
Sbjct: 60  L-KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ-FCEIVGSPYYMAPEVL 256
           CH NG++HRDLKPEN L A  S+ + +K  DFGL+I  +  +Q +    G+P Y++PEVL
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 257 RRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
           R++ YG  +D+W+ GVI+YILL G PPFW E +  +   I  G  DF    W  V+ EAK
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVL 374
           +L+  ML  NP  R+T  E L++PWI   +   ++         +K+F+   K K  +L
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAIL 297

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score =  222 bits (566), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 119/299 (39%), Positives = 174/299 (58%), Gaps = 4/299 (1%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           ++ D+Y   +ELG+G F +  +C +I TG+ YA K I  +KL    D   + RE  I R 
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSAR-DHQKLEREARICRL 59
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
           L KHPNIV   ++  ++   YLV +L  GGELF+ IV + +Y+E  A+   + IL  V  
Sbjct: 60  L-KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ-FCEIVGSPYYMAPEVL 256
           CH NG++HRDLKPEN L A  S+ + +K  DFGL+I  +  +Q +    G+P Y++PEVL
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 257 RRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
           R++ YG  +D+W+ GVI+YILL G PPFW E +  +   I  G  DF    W  V+ EAK
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVL 374
           +L+  ML  NP  R+T  E L++PWI   +   ++         +K+F+   K K  +L
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAIL 297

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score =  218 bits (556), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 113/261 (43%), Positives = 159/261 (60%), Gaps = 1/261 (0%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D+Y   K+LG G +G    C +  TG   A K I K  + T  +   +  EV +++ L  
Sbjct: 21  DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL-D 79
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HPNI+   E +EDK   YLVME+  GGELFD I+ +  ++E  AA + K +L      H+
Sbjct: 80  HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK 139
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNY 260
           + ++HRDLKPEN L    S ++ +K +DFGLS  F+ G +  E +G+ YY+APEVLR+ Y
Sbjct: 140 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKY 199
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
             + DVWS GVI+YILLCG PPF  +T++ I   + +GK  F+   W +VS EAK+LVK 
Sbjct: 200 DEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKL 259
Query: 321 MLDPNPYNRLTLEEVLENPWI 341
           ML   P  R++ EE L +PWI
Sbjct: 260 MLTYEPSKRISAEEALNHPWI 280

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score =  213 bits (543), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 110/295 (37%), Positives = 165/295 (55%), Gaps = 3/295 (1%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D Y   +ELG+G F +  +C    TG  +A K I  +KL    D   + RE  I R L +
Sbjct: 29  DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKL-Q 86
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HPNIV   ++ +++   YLV +L  GGELF+ IV +  Y+E  A+   + IL  +  CH 
Sbjct: 87  HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRN- 259
           NG++HR+LKPEN L A  ++ + +K  DFGL+I     E +    G+P Y++PEVL+++ 
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 206
Query: 260 YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK 319
           Y   +D+W+ GVI+YILL G PPFW E +  +   I  G  D+    W  V+ EAK L+ 
Sbjct: 207 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 266
Query: 320 NMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVL 374
           +ML  NP  R+T ++ L+ PWI N     +     +    +K+F+   K K  +L
Sbjct: 267 SMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAIL 321

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score =  212 bits (540), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 121/329 (36%), Positives = 182/329 (55%), Gaps = 8/329 (2%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y   +ELG+G F +  +C ++  G+ YA   I  +KL    D   + RE  I R L K
Sbjct: 11  EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSAR-DHQKLEREARICR-LLK 68
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HPNIV   ++  ++   YL+ +L  GGELF+ IV + +Y+E  A+   + IL  V  CH+
Sbjct: 69  HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 128
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ--FCEIVGSPYYMAPEVLRR 258
            GV+HR+LKPEN L A   + + +K  DFGL+I  + GEQ  +    G+P Y++PEVLR+
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPEVLRK 187
Query: 259 N-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
           + YG  +D+W+ GVI+YILL G PPFW E +  +   I  G  DF    W  V+ EAK+L
Sbjct: 188 DPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDL 247
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVV 377
           +  ML  NP  R+T  E L++PWI + +   +          +K+F+   K K  +L V+
Sbjct: 248 INKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVM 307
Query: 378 --ADNLPQDQMAQIKQMFYMMDTDKNGDL 404
               N    +   IK    +++   NGD 
Sbjct: 308 LATRNFSVRKQEIIKVTEQLIEAISNGDF 336

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score =  212 bits (540), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 123/302 (40%), Positives = 172/302 (56%), Gaps = 10/302 (3%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D +    ELGRG   I ++C +  T + YA K      LK  +D   VR E+ ++  L  
Sbjct: 53  DFFEVESELGRGATSIVYRCKQKGTQKPYALKV-----LKKTVDKKIVRTEIGVLLRL-S 106
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HPNI+  KE +E    I LV+EL  GGELFDRIV KG+Y+ER AA   K IL  V   HE
Sbjct: 107 HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHE 166
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-N 259
           NG++HRDLKPEN L+A  + ++ LK  DFGLS   +       + G+P Y APE+LR   
Sbjct: 167 NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCA 226
Query: 260 YGPEIDVWSAGVIIYILLCGVPPFWAET-EEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
           YGPE+D+WS G+I YILLCG  PF+ E  ++ +   I+  +  F    W +VS  AK+LV
Sbjct: 227 YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLV 286
Query: 319 KNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVA 378
           + ++  +P  RLT  + L++PW+     A N         ++++F+   K K  V  VVA
Sbjct: 287 RKLIVLDPKKRLTTFQALQHPWVT--GKAANFVHMDTAQKKLQEFNARRKLKAAVKAVVA 344
Query: 379 DN 380
            +
Sbjct: 345 SS 346

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score =  211 bits (538), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 108/284 (38%), Positives = 170/284 (59%), Gaps = 1/284 (0%)
Query: 60  KKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL 119
           ++++ FQ   +    +     D+Y   + LG+G FG    C +  TG+  A K I+K ++
Sbjct: 11  RENLYFQGPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQV 70
Query: 120 KTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY 179
           K + D + + REV++++ L  HPNI+   E +EDK   YLV E+  GGELFD I+++  +
Sbjct: 71  KQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF 129
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           +E  AA + + +L  +   H+N ++HRDLKPEN L    S+++ ++ IDFGLS  F+  +
Sbjct: 130 SEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 189
Query: 240 QFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK 299
           +  + +G+ YY+APEVL   Y  + DVWS GVI+YILL G PPF    E  I   + +GK
Sbjct: 190 KMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGK 249
Query: 300 IDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
             FE   W KVS+ AK+L++ ML   P  R++  + L++ WI+ 
Sbjct: 250 YTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 293

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score =  211 bits (537), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 115/291 (39%), Positives = 167/291 (57%), Gaps = 6/291 (2%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y   +ELG+G F +  +C ++  G+ YA K I  +KL    D   + RE  I R L KHP
Sbjct: 24  YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSAR-DHQKLEREARICR-LLKHP 81
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
           NIV   ++  ++   YL+ +L  GGELF+ IV + +Y+E  A+   + IL  V  CH+ G
Sbjct: 82  NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG 141
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ--FCEIVGSPYYMAPEVLRRN- 259
           V+HRDLKPEN L A   + + +K  DFGL+I  + GEQ  +    G+P Y++PEVLR++ 
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 260 YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK 319
           YG  +D+W+ GVI+YILL G PPFW E +  +   I  G  DF    W  V+ EAK+L+ 
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 260
Query: 320 NMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFK 370
            ML  NP  R+T  E L++PWI + +   +          +K+F+   K K
Sbjct: 261 KMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK 311

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score =  209 bits (532), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 115/295 (38%), Positives = 173/295 (58%), Gaps = 5/295 (1%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           +I D Y F   LG G F       +  T +  A K IAKE L+ +     +  E+ ++ H
Sbjct: 15  DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAVL-H 71
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
             KHPNIV   + YE    +YL+M+L  GGELFDRIV KG YTER A+ +   +L  VK 
Sbjct: 72  KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL- 256
            H+ G++HRDLKPEN L+    E+S++   DFGLS    PG       G+P Y+APEVL 
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA 191
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
           ++ Y   +D WS GVI YILLCG PPF+ E +  +   I++ + +F+   W  +S  AK+
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKD 251
Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKK 371
            ++++++ +P  R T E+ L++PWI  D  A + ++  +V+ +IK+    +K+K+
Sbjct: 252 FIRHLMEKDPEKRFTCEQALQHPWIAGDT-ALDKNIHQSVSEQIKKNFAKSKWKQ 305

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score =  209 bits (532), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 115/295 (38%), Positives = 173/295 (58%), Gaps = 5/295 (1%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           +I D Y F   LG G F       +  T +  A K IAKE L+ +     +  E+ ++ H
Sbjct: 15  DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAVL-H 71
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
             KHPNIV   + YE    +YL+M+L  GGELFDRIV KG YTER A+ +   +L  VK 
Sbjct: 72  KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL- 256
            H+ G++HRDLKPEN L+    E+S++   DFGLS    PG       G+P Y+APEVL 
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA 191
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
           ++ Y   +D WS GVI YILLCG PPF+ E +  +   I++ + +F+   W  +S  AK+
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKD 251
Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKK 371
            ++++++ +P  R T E+ L++PWI  D  A + ++  +V+ +IK+    +K+K+
Sbjct: 252 FIRHLMEKDPEKRFTCEQALQHPWIAGDT-ALDKNIHQSVSEQIKKNFAKSKWKQ 305

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score =  209 bits (531), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 107/267 (40%), Positives = 158/267 (59%), Gaps = 2/267 (0%)
Query: 76  EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           +G   ++Y     LG+G FG   +C +  T + YA K I K   K + D   + REVE++
Sbjct: 17  QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELL 75
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
           + L  HPNI+   E  ED  + Y+V EL  GGELFD I+ +  ++E  AA + K +   +
Sbjct: 76  KKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGI 134
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
              H++ ++HRDLKPEN L     ++  +K IDFGLS  F+   +  + +G+ YY+APEV
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
Query: 256 LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
           LR  Y  + DVWSAGVI+YILL G PPF+ + E  I   +  GK  F+   W  +S +AK
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIK 342
           +L++ ML  +P  R+T  + LE+PWI+
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQ 281

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score =  208 bits (530), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 112/295 (37%), Positives = 167/295 (56%), Gaps = 4/295 (1%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           ++ D+Y   +++G+G F +  +C ++ TG  YA K I  +KL    D   + RE  I R 
Sbjct: 1   SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSAR-DHQKLEREARICR- 58
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
           L KH NIV   ++  ++   YLV +L  GGELF+ IV + +Y+E  A+   + IL  V  
Sbjct: 59  LLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 118
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ-FCEIVGSPYYMAPEVL 256
           CH+ GV+HRDLKPEN L A   + + +K  DFGL+I  +  +Q +    G+P Y++PEVL
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 257 RRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
           R+  YG  +D+W+ GVI+YILL G PPFW E +  +   I  G  DF    W  V+ EAK
Sbjct: 179 RKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFK 370
            L+  ML  NP  R+T  E L++PW+   +   ++         +K+F+   K K
Sbjct: 239 NLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLK 293

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score =  208 bits (530), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 107/267 (40%), Positives = 158/267 (59%), Gaps = 2/267 (0%)
Query: 76  EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           +G   ++Y     LG+G FG   +C +  T + YA K I K   K + D   + REVE++
Sbjct: 17  QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELL 75
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
           + L  HPNI+   E  ED  + Y+V EL  GGELFD I+ +  ++E  AA + K +   +
Sbjct: 76  KKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGI 134
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
              H++ ++HRDLKPEN L     ++  +K IDFGLS  F+   +  + +G+ YY+APEV
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194
Query: 256 LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
           LR  Y  + DVWSAGVI+YILL G PPF+ + E  I   +  GK  F+   W  +S +AK
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIK 342
           +L++ ML  +P  R+T  + LE+PWI+
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQ 281

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score =  207 bits (527), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 114/295 (38%), Positives = 173/295 (58%), Gaps = 5/295 (1%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           +I D Y F   LG G F       +  T +  A K IAK+ L+ +     +  E+ ++ H
Sbjct: 15  DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEG--SMENEIAVL-H 71
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
             KHPNIV   + YE    +YL+M+L  GGELFDRIV KG YTER A+ +   +L  VK 
Sbjct: 72  KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL- 256
            H+ G++HRDLKPEN L+    E+S++   DFGLS    PG       G+P Y+APEVL 
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA 191
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
           ++ Y   +D WS GVI YILLCG PPF+ E +  +   I++ + +F+   W  +S  AK+
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKD 251
Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKK 371
            ++++++ +P  R T E+ L++PWI  D  A + ++  +V+ +IK+    +K+K+
Sbjct: 252 FIRHLMEKDPEKRFTCEQALQHPWIAGDT-ALDKNIHQSVSEQIKKNFAKSKWKQ 305

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score =  207 bits (526), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 109/290 (37%), Positives = 171/290 (58%), Gaps = 5/290 (1%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           + F + LG G F       E  TG+ +A K I K+ LK +     +  E+ ++R + KH 
Sbjct: 24  FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKES--SIENEIAVLRKI-KHE 80
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
           NIV  ++ YE  + +YLVM+L  GGELFDRIV KG YTE+ A+ + + +L  V   H  G
Sbjct: 81  NIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMG 140
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL-RRNYG 261
           ++HRDLKPEN L+    E S++   DFGLS     G+      G+P Y+APEVL ++ Y 
Sbjct: 141 IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYS 200
Query: 262 PEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNM 321
             +D WS GVI YILLCG PPF+ E +  +   I++ + +F+   W  +S  AK+ ++N+
Sbjct: 201 KAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNL 260
Query: 322 LDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKK 371
           ++ +P  R T E+   +PWI  D  A N ++  +V+++I++    +K+++
Sbjct: 261 MEKDPNKRYTCEQAARHPWIAGDT-ALNKNIHESVSAQIRKNFAKSKWRQ 309

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score =  206 bits (525), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 105/264 (39%), Positives = 154/264 (58%), Gaps = 3/264 (1%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D Y   +ELG+G F +  +C    TG  +A K I  +KL    D   + RE  I R L +
Sbjct: 6   DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKL-Q 63
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HPNIV   ++ +++   YLV +L  GGELF+ IV +  Y+E  A+   + IL  +  CH 
Sbjct: 64  HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRN- 259
           NG++HR+LKPEN L A  ++ + +K  DFGL+I     E +    G+P Y++PEVL+++ 
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 260 YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK 319
           Y   +D+W+ GVI+YILL G PPFW E +  +   I  G  D+    W  V+ EAK L+ 
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 243
Query: 320 NMLDPNPYNRLTLEEVLENPWIKN 343
           +ML  NP  R+T ++ L+ PWI N
Sbjct: 244 SMLTVNPKKRITADQALKVPWICN 267

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score =  206 bits (523), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 105/264 (39%), Positives = 154/264 (58%), Gaps = 3/264 (1%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D Y   +ELG+G F +  +C    TG  +A K I  +KL    D   + RE  I R L +
Sbjct: 6   DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKL-Q 63
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HPNIV   ++ +++   YLV +L  GGELF+ IV +  Y+E  A+   + IL  +  CH 
Sbjct: 64  HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRN- 259
           NG++HR+LKPEN L A  ++ + +K  DFGL+I     E +    G+P Y++PEVL+++ 
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 260 YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK 319
           Y   +D+W+ GVI+YILL G PPFW E +  +   I  G  D+    W  V+ EAK L+ 
Sbjct: 184 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 243
Query: 320 NMLDPNPYNRLTLEEVLENPWIKN 343
           +ML  NP  R+T ++ L+ PWI N
Sbjct: 244 SMLTVNPKKRITADQALKVPWICN 267

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score =  206 bits (523), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 105/264 (39%), Positives = 154/264 (58%), Gaps = 3/264 (1%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D Y   +ELG+G F +  +C    TG  +A K I  +KL    D   + RE  I R L +
Sbjct: 5   DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKL-Q 62
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HPNIV   ++ +++   YLV +L  GGELF+ IV +  Y+E  A+   + IL  +  CH 
Sbjct: 63  HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRN- 259
           NG++HR+LKPEN L A  ++ + +K  DFGL+I     E +    G+P Y++PEVL+++ 
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 182
Query: 260 YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK 319
           Y   +D+W+ GVI+YILL G PPFW E +  +   I  G  D+    W  V+ EAK L+ 
Sbjct: 183 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLID 242
Query: 320 NMLDPNPYNRLTLEEVLENPWIKN 343
           +ML  NP  R+T ++ L+ PWI N
Sbjct: 243 SMLTVNPKKRITADQALKVPWICN 266

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score =  206 bits (523), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 109/269 (40%), Positives = 157/269 (58%), Gaps = 4/269 (1%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           +I D Y F   LG G F       +  T +  A K IAKE L+ +     +  E+ ++ H
Sbjct: 15  DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAVL-H 71
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
             KHPNIV   + YE    +YL+M+L  GGELFDRIV KG YTER A+ +   +L  VK 
Sbjct: 72  KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL- 256
            H+ G++HRDLKPEN L+    E+S++   DFGLS    PG       G+P Y+APEVL 
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA 191
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
           ++ Y   +D WS GVI YILLCG PPF+ E +  +   I++ + +F+   W  +S  AK+
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKD 251
Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
            ++++++ +P  R T E+ L++PWI  D 
Sbjct: 252 FIRHLMEKDPEKRFTCEQALQHPWIAGDT 280

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score =  203 bits (516), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 114/281 (40%), Positives = 163/281 (58%), Gaps = 11/281 (3%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           NI   + F + LG G F       +  TG+ +A K I K     +  +++   E+ +++ 
Sbjct: 6   NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLEN---EIAVLKK 62
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
           + KH NIVT ++ YE     YLVM+L  GGELFDRI+ +G YTE+ A+ V + +L  VK 
Sbjct: 63  I-KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKY 121
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL- 256
            HENG++HRDLKPEN L+    ENS++   DFGLS   + G       G+P Y+APEVL 
Sbjct: 122 LHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-IMSTACGTPGYVAPEVLA 180
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
           ++ Y   +D WS GVI YILLCG PPF+ ETE  +   I  G  +FE   W  +S+ AK+
Sbjct: 181 QKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKD 240
Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKNDNHA-----PNVSL 352
            + ++L+ +P  R T E+ L +PWI  +        P+VSL
Sbjct: 241 FICHLLEKDPNERYTCEKALSHPWIDGNTALHRDIYPSVSL 281

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score =  202 bits (514), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 111/297 (37%), Positives = 166/297 (55%), Gaps = 6/297 (2%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D Y   +ELG+G F +  +C +    + YA K I  +KL    D   + RE  I R L K
Sbjct: 31  DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSAR-DHQKLEREARICR-LLK 88
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HPNIV   ++  ++   YLV +L  GGELF+ IV + +Y+E  A+     IL  V   H+
Sbjct: 89  HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQ 148
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ--FCEIVGSPYYMAPEVLRR 258
           + ++HRDLKPEN L A   + + +K  DFGL+I  + GEQ  +    G+P Y++PEVLR+
Sbjct: 149 HDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ-GEQQAWFGFAGTPGYLSPEVLRK 207
Query: 259 N-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
           + YG  +D+W+ GVI+YILL G PPFW E +  +   I  G  DF    W  V+ EAK L
Sbjct: 208 DPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNL 267
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVL 374
           +  ML  NP  R+T ++ L++PW+   +   ++         +++F+   K K  +L
Sbjct: 268 INQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAIL 324

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score =  191 bits (484), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 109/309 (35%), Positives = 174/309 (56%), Gaps = 12/309 (3%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE--IDIDDVRREVEIMRHL 138
           D Y   + +G+G F +  +C   ETG+ +A K +   K  +   +  +D++RE  I  H+
Sbjct: 24  DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC-HM 82
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH----YTERAAAAVGKTILRI 194
            KHP+IV   E Y     +Y+V E  +G +L   IV +      Y+E  A+   + IL  
Sbjct: 83  LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAP 253
           ++ CH+N ++HRD+KPEN L A    ++ +K  DFG++I   + G      VG+P++MAP
Sbjct: 143 LRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 254 EVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK 312
           EV++R  YG  +DVW  GVI++ILL G  PF+  T+E +   II+GK       W  +S+
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISE 261
Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWIK-NDNHAPNVSLGGNVTSRIKQFSIMNKFKK 371
            AK+LV+ ML  +P  R+T+ E L +PW+K  D +A  + L   V  ++++F+   K K 
Sbjct: 262 SAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETV-EQLRKFNARRKLKG 320
Query: 372 KVLRVVADN 380
            VL  V+ +
Sbjct: 321 AVLAAVSSH 329

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score =  190 bits (483), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
           N+ D Y  G+ELG G+F +  +C E  TG  YA K I K + K+    +  +D+ REV I
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           ++ + +HPN++T  E YE+K  + L++EL  GGELFD +  K   TE  A    K IL  
Sbjct: 68  LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
           V   H   + H DLKPEN +  D +    ++K IDFGL+     G +F  I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           E++  NY P   E D+WS GVI YILL G  PF  +T++     +     +FE + +   
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           S  AK+ ++ +L  +P  R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score =  190 bits (482), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/305 (36%), Positives = 167/305 (54%), Gaps = 17/305 (5%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
           N+ D Y  G+ELG G+F +  +C E  TG  YA K I K + K+    +  +D+ REV I
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           ++ + +HPN++T  E YE+K  + L++EL  GGELFD +  K   TE  A    K IL  
Sbjct: 68  LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
           V   H   + H DLKPEN +  D +    ++K IDFGL+     G +F  I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           E++  NY P   E D+WS GVI YILL G  PF  +T++     +     +FE + +   
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFK 370
           S  AK+ ++ +L  +P  R+T+++ L++PWIK  +    +S   +  +       M KFK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVN-------MEKFK 297
Query: 371 KKVLR 375
           K   R
Sbjct: 298 KFAAR 302

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score =  190 bits (482), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
           N+ D Y  G+ELG G+F +  +C E  TG  YA K I K + K+    +  +D+ REV I
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           ++ + +HPN++T  E YE+K  + L++EL  GGELFD +  K   TE  A    K IL  
Sbjct: 68  LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
           V   H   + H DLKPEN +  D +    ++K IDFGL+     G +F  I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           E++  NY P   E D+WS GVI YILL G  PF  +T++     +     +FE + +   
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           S  AK+ ++ +L  +P  R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score =  189 bits (481), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 104/269 (38%), Positives = 156/269 (57%), Gaps = 10/269 (3%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEIMRH 137
           D Y  G+ELG G+F I  +C +  TG+ YA K I K +L +    +  +++ REV I+R 
Sbjct: 5   DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
           + +HPNI+T  + +E+K  + L++EL  GGELFD +  K   TE  A    K IL  V  
Sbjct: 65  I-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHY 123
Query: 198 CHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            H   + H DLKPEN +  D +  N ++K IDFG++   + G +F  I G+P ++APE++
Sbjct: 124 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 183
Query: 257 RRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
             NY P   E D+WS GVI YILL G  PF  ET++     I     DF+ + +   S+ 
Sbjct: 184 --NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 241
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           AK+ ++ +L  +P  R+T+ + LE+ WIK
Sbjct: 242 AKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score =  188 bits (478), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
           N+ D Y  G+ELG G+F +  +C E  TG  YA K I K + K+    +  +D+ REV I
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           ++ + +HPN++T  E YE+K  + L++EL  GGELFD +  K   TE  A    K IL  
Sbjct: 68  LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
           V   H   + H DLKPEN +  D +    ++K IDFGL+     G +F  I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           E++  NY P   E D+WS GVI YILL G  PF  +T++     +     +FE + +   
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           S  AK+ ++ +L  +P  R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score =  188 bits (478), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
           N+ D Y  G+ELG G+F +  +C E  TG  YA K I K + K+    +  +D+ REV I
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           ++ + +HPN++T  E YE+K  + L++EL  GGELFD +  K   TE  A    K IL  
Sbjct: 68  LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
           V   H   + H DLKPEN +  D +    ++K IDFGL+     G +F  I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           E++  NY P   E D+WS GVI YILL G  PF  +T++     +     +FE + +   
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           S  AK+ ++ +L  +P  R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score =  188 bits (477), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
           N+ D Y  G+ELG G+F +  +C E  TG  YA K I K + K+    +  +D+ REV I
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           ++ + +HPN++T  E YE+K  + L++EL  GGELFD +  K   TE  A    K IL  
Sbjct: 68  LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
           V   H   + H DLKPEN +  D +    ++K IDFGL+     G +F  I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           E++  NY P   E D+WS GVI YILL G  PF  +T++     +     +FE + +   
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           S  AK+ ++ +L  +P  R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score =  187 bits (476), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
           N+ D Y  G+ELG G+F +  +C E  TG  YA K I K + K+    +  +D+ REV I
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           ++ + +HPN++T  E YE+K  + L++EL  GGELFD +  K   TE  A    K IL  
Sbjct: 68  LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
           V   H   + H DLKPEN +  D +    ++K IDFGL+     G +F  I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           E++  NY P   E D+WS GVI YILL G  PF  +T++     +     +FE + +   
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           S  AK+ ++ +L  +P  R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score =  187 bits (476), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
           N+ D Y  G+ELG G+F +  +C E  TG  YA K I K + K+    +  +D+ REV I
Sbjct: 7   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           ++ + +HPN++T  E YE+K  + L++EL  GGELFD +  K   TE  A    K IL  
Sbjct: 67  LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 125
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
           V   H   + H DLKPEN +  D +    ++K IDFGL+     G +F  I G+P ++AP
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 185
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           E++  NY P   E D+WS GVI YILL G  PF  +T++     +     +FE + +   
Sbjct: 186 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 243
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           S  AK+ ++ +L  +P  R+T+++ L++PWIK
Sbjct: 244 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score =  187 bits (476), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/272 (37%), Positives = 157/272 (57%), Gaps = 10/272 (3%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
           ++ D Y  G+ELG G+F I  +C +  TG+ YA K I K +L +    +  +++ REV I
Sbjct: 9   DVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 68
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           +R + +HPNI+T  + +E+K  + L++EL  GGELFD +  K   TE  A    K IL  
Sbjct: 69  LREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG 127
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
           V   H   + H DLKPEN +  D +  N ++K IDFG++   + G +F  I G+P ++AP
Sbjct: 128 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 187
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           E++  NY P   E D+WS GVI YILL G  PF  ET++     I     DF+ + +   
Sbjct: 188 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT 245
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           S+ AK+ ++ +L  +P  R+ + + LE+ WIK
Sbjct: 246 SELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score =  187 bits (476), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
           N+ D Y  G+ELG G+F +  +C E  TG  YA K I K + K+    +  +D+ REV I
Sbjct: 7   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           ++ + +HPN++T  E YE+K  + L++EL  GGELFD +  K   TE  A    K IL  
Sbjct: 67  LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 125
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
           V   H   + H DLKPEN +  D +    ++K IDFGL+     G +F  I G+P ++AP
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 185
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           E++  NY P   E D+WS GVI YILL G  PF  +T++     +     +FE + +   
Sbjct: 186 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 243
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           S  AK+ ++ +L  +P  R+T+++ L++PWIK
Sbjct: 244 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score =  187 bits (475), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
           N+ D Y  G+ELG G+F +  +C E  TG  YA K I K + K+    +  +D+ REV I
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           ++ + +HPN++T  E YE+K  + L++EL  GGELFD +  K   TE  A    K IL  
Sbjct: 68  LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
           V   H   + H DLKPEN +  D +    ++K IDFGL+     G +F  I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           E++  NY P   E D+WS GVI YILL G  PF  +T++     +     +FE + +   
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           S  AK+ ++ +L  +P  R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score =  187 bits (475), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/269 (38%), Positives = 155/269 (57%), Gaps = 10/269 (3%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEIMRH 137
           D Y  G+ELG G+F I  +C +  TG+ YA K I K +L +    +  +++ REV I+R 
Sbjct: 26  DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
           + +HPNI+T  + +E+K  + L++EL  GGELFD +  K   TE  A    K IL  V  
Sbjct: 86  I-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHY 144
Query: 198 CHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            H   + H DLKPEN +  D +  N ++K IDFG++   + G +F  I G+P ++APE++
Sbjct: 145 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 204
Query: 257 RRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
             NY P   E D+WS GVI YILL G  PF  ET++     I     DF+ + +   S+ 
Sbjct: 205 --NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSEL 262
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           AK+ ++ +L  +P  R+ + + LE+ WIK
Sbjct: 263 AKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score =  187 bits (475), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
           N+ D Y  G+ELG G+F +  +C E  TG  YA K I K + K+    +  +D+ REV I
Sbjct: 8   NVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           ++ + +HPN++T  E YE+K  + L++EL  GGELFD +  K   TE  A    K IL  
Sbjct: 68  LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
           V   H   + H DLKPEN +  D +    ++K IDFGL+     G +F  I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           E++  NY P   E D+WS GVI YILL G  PF  +T++     +     +FE + +   
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           S  AK+ ++ +L  +P  R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score =  187 bits (475), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/272 (38%), Positives = 156/272 (57%), Gaps = 10/272 (3%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
           N+ D Y  G+ELG G+F +  +C E  TG  YA K I K + K+    +  +D+ REV I
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           ++ + +HPN++T  E YE+K  + L++EL  GGELFD +  K   TE  A    K IL  
Sbjct: 68  LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
           V   H   + H DLKPEN +  D +    ++K IDFGL+     G +F  I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           E++  NY P   E D+WS GVI YILL G  PF  +T++     +     +FE + +   
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           S  AK+ ++ +L  +P  R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score =  187 bits (475), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 97/281 (34%), Positives = 153/281 (54%), Gaps = 17/281 (6%)
Query: 75  AEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACK--KIAKEKLKTEIDIDDVR--- 129
           A      KY     +GRG   +  +C    TG  +A K  ++  E+L  E  +++VR   
Sbjct: 88  AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPE-QLEEVREAT 146
Query: 130 -REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVG 188
            RE  I+R +  HP+I+T  ++YE    ++LV +L   GELFD +  K   +E+   ++ 
Sbjct: 147 RRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIM 206
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
           +++L  V   H N ++HRDLKPEN L  D   N Q++  DFG S   +PGE+  E+ G+P
Sbjct: 207 RSLLEAVSFLHANNIVHRDLKPENILLDD---NMQIRLSDFGFSCHLEPGEKLRELCGTP 263
Query: 249 YYMAPEVLR-------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
            Y+APE+L+         YG E+D+W+ GVI++ LL G PPFW   +  +   I+ G+  
Sbjct: 264 GYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQ 323
Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           F    W   S   K+L+  +L  +P  RLT E+ L++P+ +
Sbjct: 324 FSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score =  186 bits (472), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 104/272 (38%), Positives = 155/272 (56%), Gaps = 10/272 (3%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
           N+ D Y  G+ELG G F +  +C E  TG  YA K I K + K+    +  +D+ REV I
Sbjct: 8   NVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           ++ + +HPN++T  E YE+K  + L++EL  GGELFD +  K   TE  A    K IL  
Sbjct: 68  LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
           V   H   + H DLKPEN +  D +    ++K IDFGL+     G +F  I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           E++  NY P   E D+WS GVI YILL G  PF  +T++     +     +FE + +   
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           S  AK+ ++ +L  +P  R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score =  186 bits (471), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 104/272 (38%), Positives = 155/272 (56%), Gaps = 10/272 (3%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
           N+ D Y  G+ELG G+F +  +C E  TG  YA K I K + K+    +  +D+ REV I
Sbjct: 8   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           ++ + +HPN++T  E YE+K  + L+ EL  GGELFD +  K   TE  A    K IL  
Sbjct: 68  LKEI-QHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNG 126
Query: 195 VKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
           V   H   + H DLKPEN +  D +    ++K IDFGL+     G +F  I G+P ++AP
Sbjct: 127 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 186
Query: 254 EVLRRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           E++  NY P   E D+WS GVI YILL G  PF  +T++     +     +FE + +   
Sbjct: 187 EIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           S  AK+ ++ +L  +P  R+T+++ L++PWIK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score =  183 bits (465), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/309 (34%), Positives = 171/309 (55%), Gaps = 12/309 (3%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACK--KIAKEKLKTEIDIDDVRREVEIMRHL 138
           D Y   + +G+G F +  +C   ETG+ +A K   +AK      +  +D++RE  I  H+
Sbjct: 26  DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC-HM 84
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH----YTERAAAAVGKTILRI 194
            KHP+IV   E Y     +Y+V E  +G +L   IV +      Y+E  A+   + IL  
Sbjct: 85  LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 144
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAP 253
           ++ CH+N ++HRD+KP   L A    ++ +K   FG++I   + G      VG+P++MAP
Sbjct: 145 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAP 204
Query: 254 EVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK 312
           EV++R  YG  +DVW  GVI++ILL G  PF+  T+E +   II+GK       W  +S+
Sbjct: 205 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISE 263
Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWIK-NDNHAPNVSLGGNVTSRIKQFSIMNKFKK 371
            AK+LV+ ML  +P  R+T+ E L +PW+K  D +A  + L   V  ++++F+   K K 
Sbjct: 264 SAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETV-EQLRKFNARRKLKG 322
Query: 372 KVLRVVADN 380
            VL  V+ +
Sbjct: 323 AVLAAVSSH 331

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score =  183 bits (464), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 171/309 (55%), Gaps = 12/309 (3%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE--IDIDDVRREVEIMRHL 138
           D Y   + +G+G F +  +C   ETG+ +A K +   K  +   +  +D++RE  I  H+
Sbjct: 24  DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC-HM 82
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH----YTERAAAAVGKTILRI 194
            KHP+IV   E Y     +Y+V E  +G +L   IV +      Y+E  A+   + IL  
Sbjct: 83  LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAP 253
           ++ CH+N ++HRD+KP   L A    ++ +K   FG++I   + G      VG+P++MAP
Sbjct: 143 LRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 254 EVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK 312
           EV++R  YG  +DVW  GVI++ILL G  PF+  T+E +   II+GK       W  +S+
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISE 261
Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWIK-NDNHAPNVSLGGNVTSRIKQFSIMNKFKK 371
            AK+LV+ ML  +P  R+T+ E L +PW+K  D +A  + L   V  ++++F+   K K 
Sbjct: 262 SAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETV-EQLRKFNARRKLKG 320
Query: 372 KVLRVVADN 380
            VL  V+ +
Sbjct: 321 AVLAAVSSH 329

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score =  181 bits (459), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/268 (38%), Positives = 151/268 (56%), Gaps = 10/268 (3%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEIMRH 137
           D Y  G+ELG G+F I  +C E  TG  YA K I K + +     +  +++ REV I+R 
Sbjct: 12  DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ 71
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
           +  HPNI+T  + YE++  + L++EL  GGELFD +  K   +E  A +  K IL  V  
Sbjct: 72  VL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 198 CHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            H   + H DLKPEN +  D +     +K IDFGL+   + G +F  I G+P ++APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 257 RRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
             NY P   E D+WS GVI YILL G  PF  +T++     I     DF+ + + + S+ 
Sbjct: 191 --NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWI 341
           AK+ ++ +L      RLT++E L +PWI
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score =  178 bits (451), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 100/268 (37%), Positives = 150/268 (55%), Gaps = 10/268 (3%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEIMRH 137
           D Y  G+ELG G+F I  +C E  TG  YA K I K + +     +  +++ REV I+R 
Sbjct: 12  DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
           +  H N++T  + YE++  + L++EL  GGELFD +  K   +E  A +  K IL  V  
Sbjct: 72  VLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 198 CHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            H   + H DLKPEN +  D +     +K IDFGL+   + G +F  I G+P ++APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 257 RRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
             NY P   E D+WS GVI YILL G  PF  +T++     I     DF+ + + + S+ 
Sbjct: 191 --NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWI 341
           AK+ ++ +L      RLT++E L +PWI
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score =  177 bits (450), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/268 (37%), Positives = 149/268 (55%), Gaps = 10/268 (3%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEIMRH 137
           D Y  G+ELG G+F I  +C E  TG  YA K I K + +     +  +++ REV I+R 
Sbjct: 12  DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
           +  H N++T  + YE++  + L++EL  GGELFD +  K   +E  A +  K IL  V  
Sbjct: 72  VLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 198 CHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            H   + H DLKPEN +  D +     +K IDFGL+   + G +F  I G+P ++APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 257 RRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
             NY P   E D+WS GVI YILL G  PF  +T++     I     DF+ + +   S+ 
Sbjct: 191 --NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWI 341
           AK+ ++ +L      RLT++E L +PWI
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score =  177 bits (449), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/268 (37%), Positives = 150/268 (55%), Gaps = 10/268 (3%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEIMRH 137
           D Y  G+ELG G+F I  +C E  TG  YA K I K + +     +  +++ REV I+R 
Sbjct: 12  DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
           +  H N++T  + YE++  + L++EL  GGELFD +  K   +E  A +  K IL  V  
Sbjct: 72  VLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 198 CHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            H   + H DLKPEN +  D +     +K IDFGL+   + G +F  I G+P ++APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 257 RRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
             NY P   E D+WS GVI YILL G  PF  +T++     I     DF+ + + + S+ 
Sbjct: 191 --NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSEL 248
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWI 341
           AK+ ++ +L      RLT++E L +PWI
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score =  177 bits (449), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/281 (37%), Positives = 150/281 (53%), Gaps = 19/281 (6%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D Y   + +G G +    +C    T   YA K I K K        D   E+EI+    +
Sbjct: 27  DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQ 79
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HPNI+T K+ Y+D   +YLV EL  GGEL D+I+ +  ++ER A+ V  TI + V+  H 
Sbjct: 80  HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 201 NGVMHRDLKPENFLFADGSENSQ-LKAIDFGLSIFFKPGEQFCEIVGSPYY----MAPEV 255
            GV+HRDLKP N L+ D S N + L+  DFG   F K       ++ +P Y    +APEV
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFG---FAKQLRAENGLLMTPCYTANFVAPEV 196
Query: 256 LRRN-YGPEIDVWSAGVIIYILLCGVPPFW---AETEEGIAHAIIRGKIDFERDPWPKVS 311
           L+R  Y    D+WS G+++Y +L G  PF    ++T E I   I  GK       W  VS
Sbjct: 197 LKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVS 256
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSL 352
           + AK+LV  ML  +P+ RLT ++VL++PW+   +  P   L
Sbjct: 257 ETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQL 297

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score =  177 bits (449), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/281 (37%), Positives = 150/281 (53%), Gaps = 19/281 (6%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D Y   + +G G +    +C    T   YA K I K K        D   E+EI+    +
Sbjct: 27  DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQ 79
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HPNI+T K+ Y+D   +YLV EL  GGEL D+I+ +  ++ER A+ V  TI + V+  H 
Sbjct: 80  HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 201 NGVMHRDLKPENFLFADGSENSQ-LKAIDFGLSIFFKPGEQFCEIVGSPYY----MAPEV 255
            GV+HRDLKP N L+ D S N + L+  DFG   F K       ++ +P Y    +APEV
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFG---FAKQLRAENGLLMTPCYTANFVAPEV 196
Query: 256 LRRN-YGPEIDVWSAGVIIYILLCGVPPFW---AETEEGIAHAIIRGKIDFERDPWPKVS 311
           L+R  Y    D+WS G+++Y +L G  PF    ++T E I   I  GK       W  VS
Sbjct: 197 LKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVS 256
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSL 352
           + AK+LV  ML  +P+ RLT ++VL++PW+   +  P   L
Sbjct: 257 ETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQL 297

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score =  177 bits (448), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/268 (37%), Positives = 149/268 (55%), Gaps = 10/268 (3%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEIMRH 137
           D Y  G+ELG G+F I  +C E  TG  YA K I K + +     +  +++ REV I+R 
Sbjct: 12  DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
           +  H N++T  + YE++  + L++EL  GGELFD +  K   +E  A +  K IL  V  
Sbjct: 72  VLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 198 CHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            H   + H DLKPEN +  D +     +K IDFGL+   + G +F  I G+P ++APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 257 RRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
             NY P   E D+WS GVI YILL G  PF  +T++     I     DF+ + +   S+ 
Sbjct: 191 --NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWI 341
           AK+ ++ +L      RLT++E L +PWI
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score =  177 bits (448), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/268 (37%), Positives = 149/268 (55%), Gaps = 10/268 (3%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEIMRH 137
           D Y  G+ELG G+F I  +C E  TG  YA K I K + +     +  +++ REV I+R 
Sbjct: 12  DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
           +  H N++T  + YE++  + L++EL  GGELFD +  K   +E  A +  K IL  V  
Sbjct: 72  VLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 198 CHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            H   + H DLKPEN +  D +     +K IDFGL+   + G +F  I G+P ++APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 257 RRNYGP---EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
             NY P   E D+WS GVI YILL G  PF  +T++     I     DF+ + +   S+ 
Sbjct: 191 --NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSEL 248
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWI 341
           AK+ ++ +L      RLT++E L +PWI
Sbjct: 249 AKDFIRKLLVKETRKRLTIQEALRHPWI 276

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score =  176 bits (446), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 98/272 (36%), Positives = 154/272 (56%), Gaps = 8/272 (2%)
Query: 76  EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           +G I D + F ++LG G FG  H   E  +G     K I K++  +++ ++ +  E+E++
Sbjct: 17  QGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVL 74
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVN---KGH-YTERAAAAVGKTI 191
           + L  HPNI+   E +ED   +Y+VME CEGGEL +RIV+   +G   +E   A + K +
Sbjct: 75  KSL-DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM 133
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +  +   H   V+H+DLKPEN LF D S +S +K IDFGL+  FK  E      G+  YM
Sbjct: 134 MNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYM 193
Query: 252 APEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
           APEV +R+   + D+WSAGV++Y LL G  PF   + E +       + ++  +  P ++
Sbjct: 194 APEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LT 252
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
            +A +L+K ML  +P  R +  +VL + W K 
Sbjct: 253 PQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score =  176 bits (445), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 170/328 (51%), Gaps = 20/328 (6%)
Query: 68  RSVVSNPAE---GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID 124
           +  V  P E   G++ D Y   +ELG G FG+ H+C E  TG  +  K I        +D
Sbjct: 35  KKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFI---NTPYPLD 91
Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERA 183
              V+ E+ IM  L  HP ++   +A+EDK  + L++E   GGELFDRI  + +  +E  
Sbjct: 92  KYTVKNEISIMNQL-HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAE 150
Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE 243
                +     +K  HE+ ++H D+KPEN +  +  + S +K IDFGL+    P E    
Sbjct: 151 VINYMRQACEGLKHMHEHSIVHLDIKPENIM-CETKKASSVKIIDFGLATKLNPDEIVKV 209
Query: 244 IVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF 302
              +  + APE++ R   G   D+W+ GV+ Y+LL G+ PF  E +      + R   +F
Sbjct: 210 TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEF 269
Query: 303 ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQ 362
           + D +  VS EAK+ +KN+L   P  RLT+ + LE+PW+K D+         N+TSRI  
Sbjct: 270 DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH--------SNLTSRIPS 321
Query: 363 FSIMNKFKKKVLRVVAD-NLPQDQMAQI 389
            S  NK ++K+    AD   PQ  + +I
Sbjct: 322 -SRYNKIRQKIKEKYADWPAPQPAIGRI 348

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score =  175 bits (443), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 105/281 (37%), Positives = 150/281 (53%), Gaps = 19/281 (6%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D Y   +++G G + +  +C    T   +A K I K K        D   E+EI+    +
Sbjct: 22  DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-------RDPTEEIEILLRYGQ 74
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HPNI+T K+ Y+D   +Y+V EL +GGEL D+I+ +  ++ER A+AV  TI + V+  H 
Sbjct: 75  HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 201 NGVMHRDLKPENFLFADGSENSQ-LKAIDFGLSIFFKPGEQFCEIVGSPYY----MAPEV 255
            GV+HRDLKP N L+ D S N + ++  DFG   F K       ++ +P Y    +APEV
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFG---FAKQLRAENGLLMTPCYTANFVAPEV 191
Query: 256 L-RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRGKIDFERDPWPKVS 311
           L R+ Y    D+WS GV++Y +L G  PF     +T E I   I  GK       W  VS
Sbjct: 192 LERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVS 251
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSL 352
             AK+LV  ML  +P+ RLT   VL +PWI + +  P   L
Sbjct: 252 DTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQL 292

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score =  174 bits (440), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/305 (34%), Positives = 165/305 (54%), Gaps = 25/305 (8%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K LG G F I  +C   ++ + +A K I+K   + E +    ++E+  ++    HPNIV 
Sbjct: 17  KPLGEGSFSICRKCVHKKSNQAFAVKIISK---RMEAN---TQKEITALKLCEGHPNIVK 70
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
             E + D+   +LVMEL  GGELF+RI  K H++E  A+ + + ++  V   H+ GV+HR
Sbjct: 71  LHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHR 130
Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI-VGSPYYMAPEVLRRN-YGPEI 264
           DLKPEN LF D ++N ++K IDFG +    P  Q  +    + +Y APE+L +N Y    
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESC 190
Query: 265 DVWSAGVIIYILLCGVPPFWAETEE-------GIAHAIIRGKIDFERDPWPKVSKEAKEL 317
           D+WS GVI+Y +L G  PF +            I   I +G   FE + W  VS+EAK+L
Sbjct: 191 DLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDL 250
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNH-------APNV--SLGGNVTSRIK-QFSIMN 367
           ++ +L  +P  RL +  +  N W+++ +         P++  S G  V + +K  F   N
Sbjct: 251 IQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHTCVKATFHAFN 310
Query: 368 KFKKK 372
           K+K++
Sbjct: 311 KYKRE 315

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score =  173 bits (439), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/294 (35%), Positives = 149/294 (50%), Gaps = 23/294 (7%)
Query: 79  ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           I+D Y    + LG G  G   Q F   T E +A K +         D    RREVE+   
Sbjct: 13  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 64
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
             + P+IV     Y+  Y  +  + +VME  +GGELF RI ++G   +TER A+ + K+I
Sbjct: 65  ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 124
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
              ++  H   + HRD+KPEN L+     N+ LK  DFG +          E   +PYY+
Sbjct: 125 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYV 184
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
           APEVL    Y    D+WS GVI+YILLCG PPF++        G+   I  G+ +F    
Sbjct: 185 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 244
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           W +VS+E K L++N+L   P  R+T+ E + +PWI      P   L    TSR+
Sbjct: 245 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 295

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score =  172 bits (437), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 23/294 (7%)
Query: 79  ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           I+D Y    + LG G  G   Q F   T E +A K +         D    RREVE+   
Sbjct: 59  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 110
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
             + P+IV     Y+  Y  +  + +VME  +GGELF RI ++G   +TER A+ + K+I
Sbjct: 111 ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 170
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
              ++  H   + HRD+KPEN L+     N+ LK  DFG +              +PYY+
Sbjct: 171 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 230
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
           APEVL    Y    D+WS GVI+YILLCG PPF++        G+   I  G+ +F    
Sbjct: 231 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 290
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           W +VS+E K L++N+L   P  R+T+ E + +PWI      P   L    TSR+
Sbjct: 291 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 341

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score =  172 bits (437), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 23/294 (7%)
Query: 79  ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           I+D Y    + LG G  G   Q F   T E +A K +         D    RREVE+   
Sbjct: 65  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 116
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
             + P+IV     Y+  Y  +  + +VME  +GGELF RI ++G   +TER A+ + K+I
Sbjct: 117 ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 176
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
              ++  H   + HRD+KPEN L+     N+ LK  DFG +              +PYY+
Sbjct: 177 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 236
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
           APEVL    Y    D+WS GVI+YILLCG PPF++        G+   I  G+ +F    
Sbjct: 237 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 296
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           W +VS+E K L++N+L   P  R+T+ E + +PWI      P   L    TSR+
Sbjct: 297 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 347

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score =  172 bits (435), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 23/294 (7%)
Query: 79  ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           I+D Y    + LG G  G   Q F   T E +A K +         D    RREVE+   
Sbjct: 29  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 80
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTI 191
             + P+IV     Y+  Y  +  + +VME  +GGELF RI ++G   +TER A+ + K+I
Sbjct: 81  ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 140
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
              ++  H   + HRD+KPEN L+     N+ LK  DFG +              +PYY+
Sbjct: 141 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 200
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
           APEVL    Y    D+WS GVI+YILLCG PPF++        G+   I  G+ +F    
Sbjct: 201 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 260
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           W +VS+E K L++N+L   P  R+T+ E + +PWI      P   L    TSR+
Sbjct: 261 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 311

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score =  172 bits (435), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 23/294 (7%)
Query: 79  ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           I+D Y    + LG G  G   Q F   T E +A K +         D    RREVE+   
Sbjct: 20  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 71
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
             + P+IV     Y+  Y  +  + +VME  +GGELF RI ++G   +TER A+ + K+I
Sbjct: 72  ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 131
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
              ++  H   + HRD+KPEN L+     N+ LK  DFG +              +PYY+
Sbjct: 132 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 191
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
           APEVL    Y    D+WS GVI+YILLCG PPF++        G+   I  G+ +F    
Sbjct: 192 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 251
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           W +VS+E K L++N+L   P  R+T+ E + +PWI      P   L    TSR+
Sbjct: 252 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 302

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score =  171 bits (434), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 23/294 (7%)
Query: 79  ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           I+D Y    + LG G  G   Q F   T E +A K +         D    RREVE+   
Sbjct: 15  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 66
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
             + P+IV     Y+  Y  +  + +VME  +GGELF RI ++G   +TER A+ + K+I
Sbjct: 67  ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 126
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
              ++  H   + HRD+KPEN L+     N+ LK  DFG +              +PYY+
Sbjct: 127 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 186
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
           APEVL    Y    D+WS GVI+YILLCG PPF++        G+   I  G+ +F    
Sbjct: 187 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 246
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           W +VS+E K L++N+L   P  R+T+ E + +PWI      P   L    TSR+
Sbjct: 247 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 297

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score =  171 bits (434), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 23/294 (7%)
Query: 79  ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           I+D Y    + LG G  G   Q F   T E +A K +         D    RREVE+   
Sbjct: 19  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 70
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
             + P+IV     Y+  Y  +  + +VME  +GGELF RI ++G   +TER A+ + K+I
Sbjct: 71  ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 130
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
              ++  H   + HRD+KPEN L+     N+ LK  DFG +              +PYY+
Sbjct: 131 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 190
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
           APEVL    Y    D+WS GVI+YILLCG PPF++        G+   I  G+ +F    
Sbjct: 191 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 250
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           W +VS+E K L++N+L   P  R+T+ E + +PWI      P   L    TSR+
Sbjct: 251 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 301

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score =  171 bits (434), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 23/294 (7%)
Query: 79  ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           I+D Y    + LG G  G   Q F   T E +A K +         D    RREVE+   
Sbjct: 13  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 64
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
             + P+IV     Y+  Y  +  + +VME  +GGELF RI ++G   +TER A+ + K+I
Sbjct: 65  ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 124
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
              ++  H   + HRD+KPEN L+     N+ LK  DFG +              +PYY+
Sbjct: 125 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 184
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
           APEVL    Y    D+WS GVI+YILLCG PPF++        G+   I  G+ +F    
Sbjct: 185 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 244
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           W +VS+E K L++N+L   P  R+T+ E + +PWI      P   L    TSR+
Sbjct: 245 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 295

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score =  171 bits (434), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 23/294 (7%)
Query: 79  ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           I+D Y    + LG G  G   Q F   T E +A K +         D    RREVE+   
Sbjct: 15  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 66
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
             + P+IV     Y+  Y  +  + +VME  +GGELF RI ++G   +TER A+ + K+I
Sbjct: 67  ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 126
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
              ++  H   + HRD+KPEN L+     N+ LK  DFG +              +PYY+
Sbjct: 127 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 186
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
           APEVL    Y    D+WS GVI+YILLCG PPF++        G+   I  G+ +F    
Sbjct: 187 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 246
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           W +VS+E K L++N+L   P  R+T+ E + +PWI      P   L    TSR+
Sbjct: 247 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 297

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score =  171 bits (434), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 23/294 (7%)
Query: 79  ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           I+D Y    + LG G  G   Q F   T E +A K +         D    RREVE+   
Sbjct: 21  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 72
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
             + P+IV     Y+  Y  +  + +VME  +GGELF RI ++G   +TER A+ + K+I
Sbjct: 73  ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 132
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
              ++  H   + HRD+KPEN L+     N+ LK  DFG +              +PYY+
Sbjct: 133 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 192
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
           APEVL    Y    D+WS GVI+YILLCG PPF++        G+   I  G+ +F    
Sbjct: 193 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 252
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           W +VS+E K L++N+L   P  R+T+ E + +PWI      P   L    TSR+
Sbjct: 253 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 303

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score =  171 bits (434), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 148/294 (50%), Gaps = 23/294 (7%)
Query: 79  ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           I+D Y    + LG G  G   Q F   T E +A K +         D    RREVE+   
Sbjct: 14  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 65
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
             + P+IV     Y+  Y  +  + +VME  +GGELF RI ++G   +TER A+ + K+I
Sbjct: 66  ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 125
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
              ++  H   + HRD+KPEN L+     N+ LK  DFG +              +PYY+
Sbjct: 126 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 185
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
           APEVL    Y    D+WS GVI+YILLCG PPF++        G+   I  G+ +F    
Sbjct: 186 APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 245
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           W +VS+E K L++N+L   P  R+T+ E + +PWI      P   L    TSR+
Sbjct: 246 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 296

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score =  171 bits (433), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/281 (37%), Positives = 148/281 (52%), Gaps = 19/281 (6%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D Y   +++G G + +  +C    T   +A K I K K        D   E+EI+    +
Sbjct: 22  DGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK-------RDPTEEIEILLRYGQ 74
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HPNI+T K+ Y+D   +Y+V EL +GGEL D+I+ +  ++ER A+AV  TI + V+  H 
Sbjct: 75  HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 201 NGVMHRDLKPENFLFADGSENSQ-LKAIDFGLSIFFKPGEQFCEIVGSPYY----MAPEV 255
            GV+HRDLKP N L+ D S N + ++  DFG   F K       ++ +P Y    +APEV
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFG---FAKQLRAENGLLXTPCYTANFVAPEV 191
Query: 256 L-RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRGKIDFERDPWPKVS 311
           L R+ Y    D+WS GV++Y  L G  PF     +T E I   I  GK       W  VS
Sbjct: 192 LERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVS 251
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSL 352
             AK+LV   L  +P+ RLT   VL +PWI + +  P   L
Sbjct: 252 DTAKDLVSKXLHVDPHQRLTAALVLRHPWIVHWDQLPQYQL 292

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score =  171 bits (432), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/275 (37%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT----EIDID-DVRREVEIM 135
           D+Y   K LG G  G     FE +T +  A K I+K K       E D   +V  E+EI+
Sbjct: 10  DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
           + L  HP I+  K  ++ +D  Y+V+EL EGGELFD++V      E         +L  V
Sbjct: 70  KKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 127
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
           +  HENG++HRDLKPEN L +   E+  +K  DFG S           + G+P Y+APEV
Sbjct: 128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 187
Query: 256 L----RRNYGPEIDVWSAGVIIYILLCGVPPFWA-ETEEGIAHAIIRGKIDFERDPWPKV 310
           L       Y   +D WS GVI++I L G PPF    T+  +   I  GK +F  + W +V
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           S++A +LVK +L  +P  R T EE L +PW+++++
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 282

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score =  170 bits (431), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/275 (37%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT----EIDID-DVRREVEIM 135
           D+Y   K LG G  G     FE +T +  A K I+K K       E D   +V  E+EI+
Sbjct: 10  DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
           + L  HP I+  K  ++ +D  Y+V+EL EGGELFD++V      E         +L  V
Sbjct: 70  KKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 127
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
           +  HENG++HRDLKPEN L +   E+  +K  DFG S           + G+P Y+APEV
Sbjct: 128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 187
Query: 256 L----RRNYGPEIDVWSAGVIIYILLCGVPPFWAE-TEEGIAHAIIRGKIDFERDPWPKV 310
           L       Y   +D WS GVI++I L G PPF    T+  +   I  GK +F  + W +V
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           S++A +LVK +L  +P  R T EE L +PW+++++
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 282

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score =  170 bits (431), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/275 (37%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT----EIDID-DVRREVEIM 135
           D+Y   K LG G  G     FE +T +  A K I+K K       E D   +V  E+EI+
Sbjct: 9   DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
           + L  HP I+  K  ++ +D  Y+V+EL EGGELFD++V      E         +L  V
Sbjct: 69  KKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 126
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
           +  HENG++HRDLKPEN L +   E+  +K  DFG S           + G+P Y+APEV
Sbjct: 127 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 186
Query: 256 L----RRNYGPEIDVWSAGVIIYILLCGVPPFWA-ETEEGIAHAIIRGKIDFERDPWPKV 310
           L       Y   +D WS GVI++I L G PPF    T+  +   I  GK +F  + W +V
Sbjct: 187 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 246
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           S++A +LVK +L  +P  R T EE L +PW+++++
Sbjct: 247 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 281

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score =  170 bits (431), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/275 (37%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT----EIDID-DVRREVEIM 135
           D+Y   K LG G  G     FE +T +  A K I+K K       E D   +V  E+EI+
Sbjct: 10  DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
           + L  HP I+  K  ++ +D  Y+V+EL EGGELFD++V      E         +L  V
Sbjct: 70  KKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 127
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
           +  HENG++HRDLKPEN L +   E+  +K  DFG S           + G+P Y+APEV
Sbjct: 128 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 187
Query: 256 L----RRNYGPEIDVWSAGVIIYILLCGVPPFWA-ETEEGIAHAIIRGKIDFERDPWPKV 310
           L       Y   +D WS GVI++I L G PPF    T+  +   I  GK +F  + W +V
Sbjct: 188 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 247
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           S++A +LVK +L  +P  R T EE L +PW+++++
Sbjct: 248 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 282

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score =  170 bits (430), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/275 (37%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT----EIDID-DVRREVEIM 135
           D+Y   K LG G  G     FE +T +  A K I+K K       E D   +V  E+EI+
Sbjct: 16  DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
           + L  HP I+  K  ++ +D  Y+V+EL EGGELFD++V      E         +L  V
Sbjct: 76  KKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 133
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
           +  HENG++HRDLKPEN L +   E+  +K  DFG S           + G+P Y+APEV
Sbjct: 134 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 193
Query: 256 L----RRNYGPEIDVWSAGVIIYILLCGVPPFWAE-TEEGIAHAIIRGKIDFERDPWPKV 310
           L       Y   +D WS GVI++I L G PPF    T+  +   I  GK +F  + W +V
Sbjct: 194 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 253
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           S++A +LVK +L  +P  R T EE L +PW+++++
Sbjct: 254 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 288

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score =  169 bits (427), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/275 (37%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT----EIDID-DVRREVEIM 135
           D+Y   K LG G  G     FE +T +  A + I+K K       E D   +V  E+EI+
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
           + L  HP I+  K  ++ +D  Y+V+EL EGGELFD++V      E         +L  V
Sbjct: 209 KKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 266
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
           +  HENG++HRDLKPEN L +   E+  +K  DFG S           + G+P Y+APEV
Sbjct: 267 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 326
Query: 256 L----RRNYGPEIDVWSAGVIIYILLCGVPPFWAE-TEEGIAHAIIRGKIDFERDPWPKV 310
           L       Y   +D WS GVI++I L G PPF    T+  +   I  GK +F  + W +V
Sbjct: 327 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 386
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           S++A +LVK +L  +P  R T EE L +PW+++++
Sbjct: 387 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 421

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score =  168 bits (426), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 93/269 (34%), Positives = 138/269 (51%), Gaps = 18/269 (6%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKI---AKEKLKTEIDIDDVR----REVEIMRHLPKH 141
           LGRG   +  +C    T + YA K I          E ++ ++R    +EV+I+R +  H
Sbjct: 25  LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE-EVQELREATLKEVDILRKVSGH 83
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           PNI+  K+ YE     +LV +L + GELFD +  K   +E+    + + +L ++   H+ 
Sbjct: 84  PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 143
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL----- 256
            ++HRDLKPEN L  D   +  +K  DFG S    PGE+  E+ G+P Y+APE++     
Sbjct: 144 NIVHRDLKPENILLDD---DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMN 200
Query: 257 --RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
                YG E+D+WS GVI+Y LL G PPFW   +  +   I+ G   F    W   S   
Sbjct: 201 DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTV 260
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           K+LV   L   P  R T EE L +P+ + 
Sbjct: 261 KDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score =  168 bits (425), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 93/269 (34%), Positives = 138/269 (51%), Gaps = 18/269 (6%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKI---AKEKLKTEIDIDDVR----REVEIMRHLPKH 141
           LGRG   +  +C    T + YA K I          E ++ ++R    +EV+I+R +  H
Sbjct: 12  LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE-EVQELREATLKEVDILRKVSGH 70
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           PNI+  K+ YE     +LV +L + GELFD +  K   +E+    + + +L ++   H+ 
Sbjct: 71  PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 130
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL----- 256
            ++HRDLKPEN L  D   +  +K  DFG S    PGE+  E+ G+P Y+APE++     
Sbjct: 131 NIVHRDLKPENILLDD---DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMN 187
Query: 257 --RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
                YG E+D+WS GVI+Y LL G PPFW   +  +   I+ G   F    W   S   
Sbjct: 188 DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTV 247
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           K+LV   L   P  R T EE L +P+ + 
Sbjct: 248 KDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score =  168 bits (425), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 102/275 (37%), Positives = 148/275 (53%), Gaps = 12/275 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT----EIDID-DVRREVEIM 135
           D+Y   K LG G  G     FE +T +  A + I+K K       E D   +V  E+EI+
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
           + L  HP I+  K  ++ +D  Y+V+EL EGGELFD++V      E         +L  V
Sbjct: 195 KKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 252
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
           +  HENG++HRDLKPEN L +   E+  +K  DFG S           + G+P Y+APEV
Sbjct: 253 QYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEV 312
Query: 256 L----RRNYGPEIDVWSAGVIIYILLCGVPPFWAE-TEEGIAHAIIRGKIDFERDPWPKV 310
           L       Y   +D WS GVI++I L G PPF    T+  +   I  GK +F  + W +V
Sbjct: 313 LVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEV 372
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           S++A +LVK +L  +P  R T EE L +PW+++++
Sbjct: 373 SEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED 407

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score =  167 bits (424), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/303 (35%), Positives = 157/303 (51%), Gaps = 28/303 (9%)
Query: 74  PAEGNILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
           P +  + D Y   K+ LG G  G   +CF   TG+  A        LK   D    R+EV
Sbjct: 21  PKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCA--------LKLLYDSPKARQEV 72
Query: 133 EIMRHLPKHPNIVTYKEAYED----KDAIYLVMELCEGGELFDRIVNKGH--YTERAAAA 186
           +        P+IV   + YE+    K  + ++ME  EGGELF RI  +G   +TER AA 
Sbjct: 73  DHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAE 132
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ--FCEI 244
           + + I   ++  H + + HRD+KPEN L+    +++ LK  DFG   F K   Q      
Sbjct: 133 IMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG---FAKETTQNALQTP 189
Query: 245 VGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR----GK 299
             +PYY+APEVL    Y    D+WS GVI+YILLCG PPF++ T + I+  + R    G+
Sbjct: 190 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ 249
Query: 300 IDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSR 359
             F    W +VS++AK+L++ +L  +P  RLT+ + + +PWI      P   L    T+R
Sbjct: 250 YGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLH---TAR 306
Query: 360 IKQ 362
           + Q
Sbjct: 307 VLQ 309

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score =  167 bits (424), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/303 (35%), Positives = 157/303 (51%), Gaps = 28/303 (9%)
Query: 74  PAEGNILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
           P +  + D Y   K+ LG G  G   +CF   TG+  A        LK   D    R+EV
Sbjct: 2   PKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCA--------LKLLYDSPKARQEV 53
Query: 133 EIMRHLPKHPNIVTYKEAYED----KDAIYLVMELCEGGELFDRIVNKGH--YTERAAAA 186
           +        P+IV   + YE+    K  + ++ME  EGGELF RI  +G   +TER AA 
Sbjct: 54  DHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAE 113
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ--FCEI 244
           + + I   ++  H + + HRD+KPEN L+    +++ LK  DFG   F K   Q      
Sbjct: 114 IMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG---FAKETTQNALQTP 170
Query: 245 VGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR----GK 299
             +PYY+APEVL    Y    D+WS GVI+YILLCG PPF++ T + I+  + R    G+
Sbjct: 171 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ 230
Query: 300 IDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSR 359
             F    W +VS++AK+L++ +L  +P  RLT+ + + +PWI      P   L    T+R
Sbjct: 231 YGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLH---TAR 287
Query: 360 IKQ 362
           + Q
Sbjct: 288 VLQ 290

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score =  166 bits (421), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 137/269 (50%), Gaps = 18/269 (6%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKI---AKEKLKTEIDIDDVR----REVEIMRHLPKH 141
           LGRG   +  +C    T + YA K I          E ++ ++R    +EV+I+R +  H
Sbjct: 25  LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE-EVQELREATLKEVDILRKVSGH 83
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           PNI+  K+ YE     +LV +L + GELFD +  K   +E+    + + +L ++   H+ 
Sbjct: 84  PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 143
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL----- 256
            ++HRDLKPEN L  D   +  +K  DFG S    PGE+   + G+P Y+APE++     
Sbjct: 144 NIVHRDLKPENILLDD---DMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMN 200
Query: 257 --RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
                YG E+D+WS GVI+Y LL G PPFW   +  +   I+ G   F    W   S   
Sbjct: 201 DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTV 260
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           K+LV   L   P  R T EE L +P+ + 
Sbjct: 261 KDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score =  166 bits (420), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 103/294 (35%), Positives = 142/294 (48%), Gaps = 23/294 (7%)
Query: 79  ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           I+D Y    + LG G  G   Q F   T E +A K +         D    RREVE+   
Sbjct: 59  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQ--------DCPKARREVELHWR 110
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
             + P+IV     Y+  Y  +  + +V E  +GGELF RI ++G   +TER A+ + K+I
Sbjct: 111 ASQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSI 170
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
              ++  H   + HRD+KPEN L+     N+ LK  DFG +              +PYY+
Sbjct: 171 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYV 230
Query: 252 APEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDP 306
           APEVL    Y    D WS GVI YILLCG PPF++        G    I  G+ +F    
Sbjct: 231 APEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPE 290
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           W +VS+E K L++N+L   P  R T+ E   +PWI      P   L    TSR+
Sbjct: 291 WSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPLH---TSRV 341

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score =  164 bits (416), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/272 (35%), Positives = 152/272 (55%), Gaps = 9/272 (3%)
Query: 76  EGNILDKYTFGKE--LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVE 133
           +G +   YT  K   LG G FG  H+C E  TG   A K I    +K   D ++V+ E+ 
Sbjct: 82  QGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMK---DKEEVKNEIS 138
Query: 134 IMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTIL 192
           +M  L  H N++   +A+E K+ I LVME  +GGELFDRI+++ +  TE       K I 
Sbjct: 139 VMNQL-DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQIC 197
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
             ++  H+  ++H DLKPEN L  +  +  Q+K IDFGL+  +KP E+     G+P ++A
Sbjct: 198 EGIRHMHQMYILHLDLKPENILCVN-RDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLA 256
Query: 253 PEVLRRNYGP-EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
           PEV+  ++     D+WS GVI Y+LL G+ PF  + +    + I+  + D E + +  +S
Sbjct: 257 PEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDIS 316
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           +EAKE +  +L      R++  E L++PW+ +
Sbjct: 317 EEAKEFISKLLIKEKSWRISASEALKHPWLSD 348

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score =  161 bits (407), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/271 (38%), Positives = 148/271 (54%), Gaps = 15/271 (5%)
Query: 73  NPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
            P  GN    Y   K +G+G F        I TG+  A + I K +L +   +  + REV
Sbjct: 10  QPHIGN----YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSS-SLQKLFREV 64
Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
            IM+ L  HPNIV   E  E +  +YLVME   GGE+FD +V  G   E+ A A  + I+
Sbjct: 65  RIMKVL-NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
             V+ CH+  ++HRDLK EN L  D   N  +K  DFG S  F  G +  E  GSP Y A
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLL-DADMN--IKIADFGFSNEFTFGNKLDEFCGSPPYAA 180
Query: 253 PEVLR-RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           PE+ + + Y GPE+DVWS GVI+Y L+ G  PF  +  + +   ++RGK    R P+  +
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YM 236
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           S + + L+K  L  NP  R TLE+++++ W+
Sbjct: 237 STDCENLLKKFLILNPSKRGTLEQIMKDRWM 267

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score =  160 bits (405), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/285 (37%), Positives = 153/285 (53%), Gaps = 19/285 (6%)
Query: 73  NPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
            P  GN    Y   K +G+G F        I TG+  A K I K +L +   +  + REV
Sbjct: 10  QPHIGN----YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREV 64
Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
            IM+ L  HPNIV   E  E +  +YLVME   GGE+FD +V  G   E+ A A  + I+
Sbjct: 65  RIMKVL-NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
             V+ CH+  ++HRDLK EN L  D   N  +K  DFG S  F  G +     GSP Y A
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLL-DADMN--IKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 253 PEVLR-RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           PE+ + + Y GPE+DVWS GVI+Y L+ G  PF  +  + +   ++RGK    R P+  +
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YM 236
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWI----KNDNHAPNVS 351
           S + + L+K  L  NP  R TLE+++++ W+    ++D   P V+
Sbjct: 237 STDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELKPYVA 281

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score =  160 bits (404), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/271 (38%), Positives = 147/271 (54%), Gaps = 15/271 (5%)
Query: 73  NPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
            P  GN    Y   K +G+G F        I TG+  A K I K +L +   +  + REV
Sbjct: 10  QPHIGN----YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREV 64
Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
            IM+ L  HPNIV   E  E +  +YLVME   GGE+FD +V  G   E+ A A  + I+
Sbjct: 65  RIMKVL-NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
             V+ CH+  ++HRDLK EN L  D   N  +K  DFG S  F  G +     GSP Y A
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLL-DADMN--IKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 253 PEVLR-RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           PE+ + + Y GPE+DVWS GVI+Y L+ G  PF  +  + +   ++RGK    R P+  +
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YM 236
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           S + + L+K  L  NP  R TLE+++++ W+
Sbjct: 237 STDCENLLKKFLILNPSKRGTLEQIMKDRWM 267

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score =  159 bits (402), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/271 (38%), Positives = 147/271 (54%), Gaps = 15/271 (5%)
Query: 73  NPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
            P  GN    Y   K +G+G F        I TG+  A + I K +L +   +  + REV
Sbjct: 10  QPHIGN----YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSS-SLQKLFREV 64
Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
            IM+ L  HPNIV   E  E +  +YLVME   GGE+FD +V  G   E+ A A  + I+
Sbjct: 65  RIMKVL-NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
             V+ CH+  ++HRDLK EN L  D   N  +K  DFG S  F  G +     GSP Y A
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLL-DADMN--IKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 253 PEVLR-RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           PE+ + + Y GPE+DVWS GVI+Y L+ G  PF  +  + +   ++RGK    R P+  +
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YM 236
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           S + + L+K  L  NP  R TLE+++++ W+
Sbjct: 237 STDCENLLKKFLILNPSKRGTLEQIMKDRWM 267

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score =  159 bits (401), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/276 (38%), Positives = 147/276 (53%), Gaps = 16/276 (5%)
Query: 73  NPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
            P  GN    Y   K +G+G F        I TG   A K I K +L     +  + REV
Sbjct: 8   QPHIGN----YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREV 62
Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
            IM+ L  HPNIV   E  E +  +YL+ME   GGE+FD +V  G   E+ A +  + I+
Sbjct: 63  RIMKIL-NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV 121
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
             V+ CH+  ++HRDLK EN L  D   N  +K  DFG S  F  G +     GSP Y A
Sbjct: 122 SAVQYCHQKRIVHRDLKAENLLL-DADMN--IKIADFGFSNEFTVGGKLDTFCGSPPYAA 178
Query: 253 PEVLR-RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           PE+ + + Y GPE+DVWS GVI+Y L+ G  PF  +  + +   ++RGK    R P+  +
Sbjct: 179 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YM 234
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH 346
           S + + L+K  L  NP  R TLE+++++ WI N  H
Sbjct: 235 STDCENLLKRFLVLNPIKRGTLEQIMKDRWI-NAGH 269

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score =  159 bits (401), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/271 (38%), Positives = 147/271 (54%), Gaps = 15/271 (5%)
Query: 73  NPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
            P  GN    Y   K +G+G F        I TG+  A K I K +L +   +  + REV
Sbjct: 10  QPHIGN----YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREV 64
Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
            IM+ L  HPNIV   E  E +  +YLVME   GGE+FD +V  G   E+ A A  + I+
Sbjct: 65  RIMKVL-NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 123
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
             V+ CH+  ++HRDLK EN L  D   N  +K  DFG S  F  G +     G+P Y A
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLL-DADMN--IKIADFGFSNEFTFGNKLDAFCGAPPYAA 180
Query: 253 PEVLR-RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           PE+ + + Y GPE+DVWS GVI+Y L+ G  PF  +  + +   ++RGK    R P+  +
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YM 236
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           S + + L+K  L  NP  R TLE+++++ W+
Sbjct: 237 STDCENLLKKFLILNPSKRGTLEQIMKDRWM 267

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score =  158 bits (400), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/261 (38%), Positives = 144/261 (55%), Gaps = 11/261 (4%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y   K +G+G F        I TG+  A K I K +L +   +  + REV IM+ L  HP
Sbjct: 9   YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREVRIMKVL-NHP 66
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
           NIV   E  E +  +YLVME   GGE+FD +V  G   E+ A A  + I+  V+ CH+  
Sbjct: 67  NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNY- 260
           ++HRDLK EN L  D   N  +K  DFG S  F  G +     GSP Y APE+ + + Y 
Sbjct: 127 IVHRDLKAENLLL-DADMN--IKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD 183
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
           GPE+DVWS GVI+Y L+ G  PF  +  + +   ++RGK    R P+  +S + + L+K 
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YMSTDCENLLKK 239
Query: 321 MLDPNPYNRLTLEEVLENPWI 341
            L  NP  R TLE+++++ W+
Sbjct: 240 FLILNPSKRGTLEQIMKDRWM 260

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score =  158 bits (400), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 104/280 (37%), Positives = 149/280 (53%), Gaps = 12/280 (4%)
Query: 69  SVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDV 128
           S+ S   E   +  Y   K +G+G F        I TG   A K I K +L     +  +
Sbjct: 3   SIASCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKL 61
Query: 129 RREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVG 188
            REV IM+ L  HPNIV   E  E +  +YL+ME   GGE+FD +V  G   E+ A +  
Sbjct: 62  FREVRIMKIL-NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF 120
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
           + I+  V+ CH+  ++HRDLK EN L  D   N  +K  DFG S  F  G +     G+P
Sbjct: 121 RQIVSAVQYCHQKRIVHRDLKAENLLL-DADMN--IKIADFGFSNEFTVGGKLDAFCGAP 177
Query: 249 YYMAPEVLR-RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP 306
            Y APE+ + + Y GPE+DVWS GVI+Y L+ G  PF  +  + +   ++RGK    R P
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIP 234
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH 346
           +  +S + + L+K  L  NP  R TLE+++++ WI N  H
Sbjct: 235 F-YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWI-NAGH 272

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score =  158 bits (400), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 101/276 (36%), Positives = 145/276 (52%), Gaps = 13/276 (4%)
Query: 72  SNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           S+ A+G  +  Y   K LG G FG     +   TG+  A K I K+ L        + RE
Sbjct: 5   SSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIERE 64
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
           +  +R L +HP+I+   +  + KD I +V+E   G ELFD IV +   +E+ A    + I
Sbjct: 65  ISYLR-LLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQI 122
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +  V+ CH + ++HRDLKPEN L     E+  +K  DFGLS     G       GSP Y 
Sbjct: 123 ISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 179
Query: 252 APEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
           APEV+  +   GPE+DVWS GVI+Y++LC   PF  E+   +   I  G         PK
Sbjct: 180 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL-----PK 234
Query: 310 -VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
            +S  A  L+K ML  NP NR+++ E++++ W K D
Sbjct: 235 FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 270

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score =  158 bits (399), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 101/276 (36%), Positives = 145/276 (52%), Gaps = 13/276 (4%)
Query: 72  SNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           S+ A+G  +  Y   K LG G FG     +   TG+  A K I K+ L        + RE
Sbjct: 4   SSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIERE 63
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
           +  +R L +HP+I+   +  + KD I +V+E   G ELFD IV +   +E+ A    + I
Sbjct: 64  ISYLR-LLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQI 121
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +  V+ CH + ++HRDLKPEN L     E+  +K  DFGLS     G       GSP Y 
Sbjct: 122 ISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYA 178
Query: 252 APEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
           APEV+  +   GPE+DVWS GVI+Y++LC   PF  E+   +   I  G         PK
Sbjct: 179 APEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL-----PK 233
Query: 310 -VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
            +S  A  L+K ML  NP NR+++ E++++ W K D
Sbjct: 234 FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score =  157 bits (396), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/273 (36%), Positives = 143/273 (52%), Gaps = 13/273 (4%)
Query: 75  AEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI 134
           A+G  +  Y   K LG G FG     +   TG+  A K I K+ L        + RE+  
Sbjct: 2   ADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISY 61
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           +R L +HP+I+   +  + KD I +V+E   G ELFD IV +   +E+ A    + I+  
Sbjct: 62  LRLL-RHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISA 119
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           V+ CH + ++HRDLKPEN L     E+  +K  DFGLS     G       GSP Y APE
Sbjct: 120 VEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPE 176
Query: 255 VL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VS 311
           V+  +   GPE+DVWS GVI+Y++LC   PF  E+   +   I  G         PK +S
Sbjct: 177 VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL-----PKFLS 231
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
             A  L+K ML  NP NR+++ E++++ W K D
Sbjct: 232 PGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 264

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score =  155 bits (392), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 146/270 (54%), Gaps = 7/270 (2%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           ++LD Y   +ELG G FG+ H+  E  TG  +A K +       E D + VR+E++ M  
Sbjct: 48  HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSV 104
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVK 196
           L +HP +V   +A+ED + + ++ E   GGELF+++ ++ +  +E  A    + + + + 
Sbjct: 105 L-RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLC 163
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
             HEN  +H DLKPEN +F     N +LK IDFGL+    P +      G+  + APEV 
Sbjct: 164 HMHENNYVHLDLKPENIMFTTKRSN-ELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA 222
Query: 257 R-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
             +  G   D+WS GV+ YILL G+ PF  E ++     +     + +   +  +S++ K
Sbjct: 223 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 282
Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           + ++ +L  +P  R+T+ + LE+PW+   N
Sbjct: 283 DFIRKLLLADPNTRMTIHQALEHPWLTPGN 312

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score =  155 bits (392), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 149/267 (55%), Gaps = 8/267 (2%)
Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
           + +KY   ++LGRGEFGI H+C E  + +TY  K +   K+K   D   V++E+ I+ ++
Sbjct: 3   LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFV---KVKG-TDQVLVKKEISIL-NI 57
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKV 197
            +H NI+   E++E  + + ++ E   G ++F+RI  +     ER   +    +   ++ 
Sbjct: 58  ARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQF 117
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR 257
            H + + H D++PEN ++     +S +K I+FG +   KPG+ F  +  +P Y APEV +
Sbjct: 118 LHSHNIGHFDIRPENIIY-QTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQ 176
Query: 258 RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            +      D+WS G ++Y+LL G+ PF AET + I   I+  +  F+ + + ++S EA +
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236
Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKN 343
            V  +L     +R+T  E L++PW+K 
Sbjct: 237 FVDRLLVKERKSRMTASEALQHPWLKQ 263

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score =  154 bits (390), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 139/293 (47%), Gaps = 42/293 (14%)
Query: 79  ILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           I+D Y    + LG G  G   Q F   T E +A K +         D    RREVE+   
Sbjct: 15  IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--------DCPKARREVELHWR 66
Query: 138 LPKHPNIV----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTI 191
             + P+IV     Y+  Y  +  + +VME  +GGELF RI ++G   +TER A+ + K+I
Sbjct: 67  ASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 126
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
              ++  H   + HRD+KPEN L+     N+ LK  DFG                     
Sbjct: 127 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-------------------- 166
Query: 252 APEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDPW 307
           A E     Y    D+WS GVI+YILLCG PPF++        G+   I  G+ +F    W
Sbjct: 167 AKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 226
Query: 308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
            +VS+E K L++N+L   P  R+T+ E + +PWI      P   L    TSR+
Sbjct: 227 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLH---TSRV 276

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score =  154 bits (390), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 146/270 (54%), Gaps = 7/270 (2%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           ++LD Y   +ELG G FG+ H+  E  TG  +A K +       E D + VR+E++ M  
Sbjct: 154 HVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSV 210
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVK 196
           L +HP +V   +A+ED + + ++ E   GGELF+++ ++ +  +E  A    + + + + 
Sbjct: 211 L-RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLC 269
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
             HEN  +H DLKPEN +F     N +LK IDFGL+    P +      G+  + APEV 
Sbjct: 270 HMHENNYVHLDLKPENIMFTTKRSN-ELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA 328
Query: 257 R-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
             +  G   D+WS GV+ YILL G+ PF  E ++     +     + +   +  +S++ K
Sbjct: 329 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 388
Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           + ++ +L  +P  R+T+ + LE+PW+   N
Sbjct: 389 DFIRKLLLADPNTRMTIHQALEHPWLTPGN 418

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score =  154 bits (390), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/265 (36%), Positives = 139/265 (52%), Gaps = 13/265 (4%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y   K LG G FG     +   TG+  A K I K+ L        + RE+  +R L +HP
Sbjct: 6   YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHP 64
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
           +I+   +  + KD I +V+E   G ELFD IV +   +E+ A    + I+  V+ CH + 
Sbjct: 65  HIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK 123
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL--RRNY 260
           ++HRDLKPEN L     E+  +K  DFGLS     G       GSP Y APEV+  +   
Sbjct: 124 IVHRDLKPENLLL---DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 180
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKELVK 319
           GPE+DVWS GVI+Y++LC   PF  E+   +   I  G         PK +S  A  L+K
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTL-----PKFLSPGAAGLIK 235
Query: 320 NMLDPNPYNRLTLEEVLENPWIKND 344
            ML  NP NR+++ E++++ W K D
Sbjct: 236 RMLIVNPLNRISIHEIMQDDWFKVD 260

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score =  154 bits (389), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/264 (36%), Positives = 138/264 (52%), Gaps = 10/264 (3%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y  G  LG G FG         TG   A K + ++K+++   +  +RRE++ ++ L +HP
Sbjct: 18  YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK-LFRHP 76
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
           +I+   +       I++VME   GGELFD I   G   E+ +  + + IL  V  CH + 
Sbjct: 77  HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL--RRNY 260
           V+HRDLKPEN L  D   N+  K  DFGLS     GE      GSP Y APEV+  R   
Sbjct: 137 VVHRDLKPENVLL-DAHMNA--KIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYA 193
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
           GPE+D+WS+GVI+Y LLCG  PF  +    +   I  G     +   P V      L+K+
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVI----SLLKH 249
Query: 321 MLDPNPYNRLTLEEVLENPWIKND 344
           ML  +P  R T++++ E+ W K D
Sbjct: 250 MLQVDPMKRATIKDIREHEWFKQD 273

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score =  153 bits (387), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/267 (35%), Positives = 140/267 (52%), Gaps = 10/267 (3%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           +  Y  G  LG G FG         TG   A K + ++K+++   +  ++RE++ ++ L 
Sbjct: 10  IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LF 68
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HP+I+   +        ++VME   GGELFD I   G   E  A  + + IL  V  CH
Sbjct: 69  RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH 128
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL--R 257
            + V+HRDLKPEN L  D   N+  K  DFGLS     GE   +  GSP Y APEV+  R
Sbjct: 129 RHMVVHRDLKPENVLL-DAHMNA--KIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGR 185
Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
              GPE+D+WS GVI+Y LLCG  PF  E    +    IRG + +  +    +++    L
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK-IRGGVFYIPE---YLNRSVATL 241
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKND 344
           + +ML  +P  R T++++ E+ W K D
Sbjct: 242 LMHMLQVDPLKRATIKDIREHEWFKQD 268

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score =  152 bits (385), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 140/267 (52%), Gaps = 10/267 (3%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           +  Y  G  LG G FG         TG   A K + ++K+++   +  ++RE++ ++ L 
Sbjct: 10  IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LF 68
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HP+I+   +        ++VME   GGELFD I   G   E  A  + + IL  V  CH
Sbjct: 69  RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH 128
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL--R 257
            + V+HRDLKPEN L  D   N+++   DFGLS     GE      GSP Y APEV+  R
Sbjct: 129 RHMVVHRDLKPENVLL-DAHMNAKIA--DFGLSNMMSDGEFLRTSCGSPNYAAPEVISGR 185
Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
              GPE+D+WS GVI+Y LLCG  PF  E    +    IRG + +  +    +++    L
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK-IRGGVFYIPE---YLNRSVATL 241
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKND 344
           + +ML  +P  R T++++ E+ W K D
Sbjct: 242 LMHMLQVDPLKRATIKDIREHEWFKQD 268

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score =  152 bits (384), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/275 (37%), Positives = 149/275 (54%), Gaps = 11/275 (4%)
Query: 69  SVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDV 128
           S+ S   E   +  Y   K +G+G F        + TG   A K I K +L     +  +
Sbjct: 3   SITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQL-NPTSLQKL 61
Query: 129 RREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVG 188
            REV IM+ L  HPNIV   E  E +  +YLVME   GGE+FD +V  G   E+ A A  
Sbjct: 62  FREVRIMKIL-NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 120
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
           + I+  V+ CH+  ++HRDLK EN L  DG  N  +K  DFG S  F  G +     GSP
Sbjct: 121 RQIVSAVQYCHQKYIVHRDLKAENLLL-DGDMN--IKIADFGFSNEFTVGNKLDTFCGSP 177
Query: 249 YYMAPEVLR-RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP 306
            Y APE+ + + Y GPE+DVWS GVI+Y L+ G  PF  +  + +   ++RGK    R P
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIP 234
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           +  +S + + L+K +L  NP  R +LE+++++ W+
Sbjct: 235 F-YMSTDCENLLKKLLVLNPIKRGSLEQIMKDRWM 268

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score =  150 bits (380), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/260 (37%), Positives = 139/260 (53%), Gaps = 11/260 (4%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y   K +G+G F        I TG+  A K I K +L +   +  + REV I + L  HP
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSS-SLQKLFREVRIXKVL-NHP 73
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
           NIV   E  E +  +YLV E   GGE+FD +V  G   E+ A A  + I+  V+ CH+  
Sbjct: 74  NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNY- 260
           ++HRDLK EN L  D   N  +K  DFG S  F  G +     G+P Y APE+ + + Y 
Sbjct: 134 IVHRDLKAENLLL-DADXN--IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYD 190
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
           GPE+DVWS GVI+Y L+ G  PF  +  + +   ++RGK    R P+   S + + L+K 
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY---RIPF-YXSTDCENLLKK 246
Query: 321 MLDPNPYNRLTLEEVLENPW 340
            L  NP  R TLE++ ++ W
Sbjct: 247 FLILNPSKRGTLEQIXKDRW 266

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score =  150 bits (379), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 147/278 (52%), Gaps = 10/278 (3%)
Query: 69  SVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDV 128
           ++   P     +D +  G+ LG+G+FG  +   E +     A K + K +L+ E     +
Sbjct: 3   ALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL 62
Query: 129 RREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVG 188
           RRE+EI  HL +HPNI+     + D+  IYL++E    GEL+  +   G + E+ +A   
Sbjct: 63  RREIEIQSHL-RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 121
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
           + +   +  CHE  V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+ 
Sbjct: 122 EELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWSV-HAPSLRRRXMCGTL 177
Query: 249 YYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
            Y+ PE++  + +  ++D+W AGV+ Y  L G+PPF + +       I+   + F     
Sbjct: 178 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP---- 233
Query: 308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           P +S  +K+L+  +L  +P  RL L+ V+E+PW+K ++
Sbjct: 234 PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANS 271

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score =  150 bits (378), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 143/272 (52%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 11  LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL- 69
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 70  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L      N +LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 130 SKRVIHRDIKPENLLLGS---NGELKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G+PPF A T +     I R +  F     P  V++ A++L
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF-----PDFVTEGARDL 240
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  N   RLTL EVLE+PWIK ++  P+
Sbjct: 241 ISRLLKHNASQRLTLAEVLEHPWIKANSSKPS 272

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score =  149 bits (375), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 143/272 (52%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 11  LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHL- 69
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 70  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L      N +LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 130 SKRVIHRDIKPENLLLGS---NGELKIADFGWSV-HAPSSRRDTLCGTLDYLPPEMIEGR 185
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G+PPF A T +     I R +  F     P  V++ A++L
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF-----PDFVTEGARDL 240
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  N   RLTL EVLE+PWIK ++  P+
Sbjct: 241 ISRLLKHNASQRLTLAEVLEHPWIKANSSKPS 272

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score =  148 bits (374), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 152/310 (49%), Gaps = 52/310 (16%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK--TEIDIDDVRREVEIMRHLP 139
           KY     +G+G +G+     E +T    A K + K K++     D++ ++ EV +M+ L 
Sbjct: 27  KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL- 85
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKT-------- 190
            HPNI    E YED+  I LVMELC GG L D++ V     T + A  V KT        
Sbjct: 86  HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145
Query: 191 -------------------------------ILRIVKVCHENGVMHRDLKPENFLFADGS 219
                                          I   +   H  G+ HRD+KPENFLF+  +
Sbjct: 146 NEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFST-N 204
Query: 220 ENSQLKAIDFGLSI-FFK--PGEQF--CEIVGSPYYMAPEVLR---RNYGPEIDVWSAGV 271
           ++ ++K +DFGLS  F+K   GE +      G+PY++APEVL     +YGP+ D WSAGV
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264
Query: 272 IIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLT 331
           ++++LL G  PF    +      ++  K+ FE   +  +S  A++L+ N+L+ N   R  
Sbjct: 265 LLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFD 324
Query: 332 LEEVLENPWI 341
               L++PWI
Sbjct: 325 AMRALQHPWI 334

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score =  147 bits (371), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 140/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 12  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 70
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    GE++  +     + E+  A     +   +  CH
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 131 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 186
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 241
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 242 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score =  146 bits (369), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 140/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 12  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 70
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    GE++  +     + E+  A     +   +  CH
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 131 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLXGTLDYLPPEMIEGR 186
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 241
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 242 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score =  146 bits (369), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 146/278 (52%), Gaps = 10/278 (3%)
Query: 69  SVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDV 128
           ++   P     +D +   + LG+G+FG  +   E +     A K + K +L+ E     +
Sbjct: 2   ALAEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL 61
Query: 129 RREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVG 188
           RRE+EI  HL +HPNI+     + D+  IYL++E    GEL+  +   G + E+ +A   
Sbjct: 62  RREIEIQSHL-RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 120
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
           + +   +  CHE  V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+ 
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWSV-HAPSLRRRXMCGTL 176
Query: 249 YYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
            Y+ PE++  + +  ++D+W AGV+ Y  L G+PPF + +       I+   + F     
Sbjct: 177 DYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP---- 232
Query: 308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           P +S  +K+L+  +L  +P  RL L+ V+E+PW+K ++
Sbjct: 233 PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANS 270

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score =  145 bits (367), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 140/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 7   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 65
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +  E+ G+  Y+ PE++  R
Sbjct: 126 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTELCGTLDYLPPEMIEGR 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 236
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score =  145 bits (367), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 148/272 (54%), Gaps = 11/272 (4%)
Query: 77  GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMR 136
           G  ++ +  G  LG+G F   ++   I TG   A K I K+ +     +  V+ EV+I  
Sbjct: 7   GEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHC 66
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIV 195
            L KHP+I+     +ED + +YLV+E+C  GE+   + N+   ++E  A      I+  +
Sbjct: 67  QL-KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGM 125
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPE 254
              H +G++HRDL   N L    + N  +K  DFGL+   K P E+   + G+P Y++PE
Sbjct: 126 LYLHSHGILHRDLTLSNLLL---TRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPE 182
Query: 255 VLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           +  R+ +G E DVWS G + Y LL G PPF  +T +   + ++    D+E   +  +S E
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA--DYEMPSF--LSIE 238
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           AK+L+  +L  NP +RL+L  VL++P++  ++
Sbjct: 239 AKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS 270

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score =  145 bits (365), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 140/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 12  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 70
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +  ++ G+  Y+ PE++  R
Sbjct: 131 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGR 186
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 241
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 242 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score =  144 bits (364), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 140/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 8   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 66
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 67  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +  ++ G+  Y+ PE++  R
Sbjct: 127 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGR 182
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 237
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 238 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score =  144 bits (364), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 140/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 7   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 65
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +  ++ G+  Y+ PE++  R
Sbjct: 126 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 236
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score =  144 bits (364), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 10  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 68
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 129 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 239
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score =  144 bits (364), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 12  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 70
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 131 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 186
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 187 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 241
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 242 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score =  144 bits (363), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 140/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 7   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 65
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +  ++ G+  Y+ PE++  R
Sbjct: 126 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 236
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score =  144 bits (363), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 10  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 68
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 129 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGR 184
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 239
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score =  144 bits (363), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 24  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 82
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 83  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 143 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 198
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 199 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 253
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 254 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 285

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score =  144 bits (363), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 7   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 65
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 126 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 236
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score =  144 bits (362), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 33  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 91
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 92  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 152 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 207
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 262
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 263 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 294

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score =  144 bits (362), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/287 (34%), Positives = 147/287 (51%), Gaps = 20/287 (6%)
Query: 68  RSVVSNPAEGNIL---DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAK-EKLKTEI 123
           R  VS P +  I+   D+Y   K++G G FG+     + ++ E  A K I + EK+    
Sbjct: 3   RPAVSGPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAA-- 60
Query: 124 DIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA 183
              +V+RE+   R L +HPNIV +KE       + +VME   GGELF+RI N G ++E  
Sbjct: 61  ---NVKREIINHRSL-RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDE 116
Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE 243
           A    + ++  V  CH   V HRDLK EN L  DGS   +LK  DFG S       Q   
Sbjct: 117 ARFFFQQLISGVSYCHAMQVCHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKS 175
Query: 244 IVGSPYYMAPEV-LRRNY-GPEIDVWSAGVIIYILLCGVPPFWAETE----EGIAHAIIR 297
            VG+P Y+APEV L++ Y G   DVWS GV +Y++L G  PF    E        H I+ 
Sbjct: 176 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL- 234
Query: 298 GKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW-IKN 343
             + +    +  +S E + L+  +   +P  R+++ E+  + W +KN
Sbjct: 235 -NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKN 280

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score =  144 bits (362), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 138/272 (50%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 12  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 70
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 71  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+  Y+ PE +  R
Sbjct: 131 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEXIEGR 186
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 187 XHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 241
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 242 ISRLLKHNPSQRPXLREVLEHPWITANSSKPS 273

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score =  144 bits (362), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 9   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 67
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 68  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 128 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGR 183
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 238
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 239 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 270

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score =  143 bits (361), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 140/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 33  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 91
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 92  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +  ++ G+  Y+ PE++  R
Sbjct: 152 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRDDLCGTLDYLPPEMIEGR 207
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 208 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 262
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 263 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 294

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score =  143 bits (361), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 7   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 65
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 126 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 236
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score =  143 bits (361), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 6   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 64
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 65  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 125 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 180
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 181 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 235
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 236 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 267

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score =  143 bits (361), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 7   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 65
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 126 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTXLCGTLDYLPPEMIEGR 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 236
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score =  143 bits (361), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 11  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 69
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 70  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 130 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 240
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 241 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 272

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score =  143 bits (361), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 138/272 (50%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E  +    A K + K +L+       +RREVEI  HL 
Sbjct: 7   LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 65
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 66  RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 126 SKKVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTF-----PDFVTEGARDL 236
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score =  143 bits (360), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 139/274 (50%), Gaps = 12/274 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 8   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 66
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 67  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S    P  +   + G+  Y+ PE++  R
Sbjct: 127 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSC-HAPSSRRTTLSGTLDYLPPEMIEGR 182
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 237
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVS 351
           +  +L  NP  R  L EVLE+PWI  ++  P+ S
Sbjct: 238 ISRLLKHNPSQRPMLREVLEHPWITANSSKPSNS 271

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score =  143 bits (360), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 134/262 (51%), Gaps = 8/262 (3%)
Query: 86  GKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV 145
            KELGRG+F +  QC    TG+ YA K + K +   +   + +  E+ ++      P ++
Sbjct: 34  SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAE-ILHEIAVLELAKSCPRVI 92
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGV 203
              E YE+   I L++E   GGE+F   + +     +E     + K IL  V   H+N +
Sbjct: 93  NLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNI 152
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGP- 262
           +H DLKP+N L +       +K +DFG+S       +  EI+G+P Y+APE+L  NY P 
Sbjct: 153 VHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEIL--NYDPI 210
Query: 263 --EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
               D+W+ G+I Y+LL    PF  E  +     I +  +D+  + +  VS+ A + +++
Sbjct: 211 TTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQS 270
Query: 321 MLDPNPYNRLTLEEVLENPWIK 342
           +L  NP  R T E  L + W++
Sbjct: 271 LLVKNPEKRPTAEICLSHSWLQ 292

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score =  142 bits (359), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 7   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 65
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 66  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 126 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGR 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 182 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 236
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 237 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score =  142 bits (359), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 8   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 66
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 67  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 127 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRDTLCGTLDYLPPEMIEGR 182
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 183 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 237
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 238 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score =  142 bits (359), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 9   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 67
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 68  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  +FG S+   P  +   + G+  Y+ PE++  R
Sbjct: 128 SKRVIHRDIKPENLLLGSAGE---LKIANFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 183
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 184 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 238
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 239 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 270

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score =  142 bits (359), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 140/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 10  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 68
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +  ++ G+  Y+ PE++  R
Sbjct: 129 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRDDLCGTLDYLPPEMIEGR 184
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 239
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score =  142 bits (357), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 139/272 (51%), Gaps = 12/272 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 10  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 68
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  +FG S+   P  +   + G+  Y+ PE++  R
Sbjct: 129 SKRVIHRDIKPENLLLGSAGE---LKIANFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 239
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +L  NP  R  L EVLE+PWI  ++  P+
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score =  141 bits (356), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 146/282 (51%), Gaps = 17/282 (6%)
Query: 68  RSVVSNPAEGNIL---DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID 124
           R  VS P +  I+   D+Y   K++G G FG+     + ++ E  A K I + +   +ID
Sbjct: 3   RPAVSGPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE---KID 59
Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
            ++V+RE+   R L +HPNIV +KE       + +VME   GGELF+RI N G ++E  A
Sbjct: 60  -ENVKREIINHRSL-RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA 117
Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI 244
               + ++  V  CH   V HRDLK EN L  DGS   +LK   FG S       Q  + 
Sbjct: 118 RFFFQQLISGVSYCHAMQVCHRDLKLENTLL-DGSPAPRLKICAFGYSKSSVLHSQPKDT 176
Query: 245 VGSPYYMAPEV-LRRNY-GPEIDVWSAGVIIYILLCGVPPFWAETE----EGIAHAIIRG 298
           VG+P Y+APEV L++ Y G   DVWS GV +Y++L G  PF    E        H I+  
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL-- 234
Query: 299 KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
            + +    +  +S E + L+  +   +P  R+++ E+  + W
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEW 276

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score =  141 bits (355), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 137/268 (51%), Gaps = 12/268 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 10  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 68
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 129 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 239
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           +  +L  NP  R  L EVLE+PWI  ++
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITANS 267

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score =  141 bits (355), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 145/282 (51%), Gaps = 17/282 (6%)
Query: 68  RSVVSNPAEGNIL---DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID 124
           R  VS P +  I+   D+Y   K++G G FG+     + ++ E  A K I + +   +ID
Sbjct: 3   RPAVSGPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE---KID 59
Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
            ++V+RE+   R L +HPNIV +KE       + +VME   GGELF+RI N G ++E  A
Sbjct: 60  -ENVKREIINHRSL-RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA 117
Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI 244
               + ++  V  CH   V HRDLK EN L  DGS   +LK   FG S       Q    
Sbjct: 118 RFFFQQLISGVSYCHAMQVCHRDLKLENTLL-DGSPAPRLKICAFGYSKSSVLHSQPKST 176
Query: 245 VGSPYYMAPEV-LRRNY-GPEIDVWSAGVIIYILLCGVPPFWAETE----EGIAHAIIRG 298
           VG+P Y+APEV L++ Y G   DVWS GV +Y++L G  PF    E        H I+  
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL-- 234
Query: 299 KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
            + +    +  +S E + L+  +   +P  R+++ E+  + W
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEW 276

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score =  141 bits (355), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/270 (35%), Positives = 142/270 (52%), Gaps = 15/270 (5%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D+Y   K++G G FG+     + ++ E  A K I + +   +ID ++V+RE+   R L +
Sbjct: 18  DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE---KID-ENVKREIINHRSL-R 72
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HPNIV +KE       + +VME   GGELF+RI N G ++E  A    + ++  V  CH 
Sbjct: 73  HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 132
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV-LRRN 259
             V HRDLK EN L  DGS   +LK  DFG S       Q    VG+P Y+APEV L++ 
Sbjct: 133 MQVCHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 191
Query: 260 Y-GPEIDVWSAGVIIYILLCGVPPFWAETE----EGIAHAIIRGKIDFERDPWPKVSKEA 314
           Y G   DVWS GV +Y++L G  PF    E        H I+   + +    +  +S E 
Sbjct: 192 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL--NVQYAIPDYVHISPEC 249
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPW-IKN 343
           + L+  +   +P  R+++ E+  + W +KN
Sbjct: 250 RHLISRIFVADPAKRISIPEIRNHEWFLKN 279

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score =  140 bits (354), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 137/268 (51%), Gaps = 12/268 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 10  LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 68
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 69  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 129 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRXXLCGTLDYLPPEMIEGR 184
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 185 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 239
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           +  +L  NP  R  L EVLE+PWI  ++
Sbjct: 240 ISRLLKHNPSQRPMLREVLEHPWITANS 267

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score =  139 bits (351), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 136/268 (50%), Gaps = 12/268 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E +     A K + K +L+       +RREVEI  HL 
Sbjct: 4   LEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 62
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 63  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L     E   LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 123 SKRVIHRDIKPENLLLGSAGE---LKIADFGWSV-HAPSSRRTTLCGTLDYLPPEMIEGR 178
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKEL 317
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F     P  V++ A++L
Sbjct: 179 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVTEGARDL 233
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           +  +L  NP  R  L EVLE+PWI  ++
Sbjct: 234 ISRLLKHNPSQRPMLREVLEHPWITANS 261

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score =  139 bits (351), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/284 (35%), Positives = 145/284 (51%), Gaps = 18/284 (6%)
Query: 70  VVSNPAEGNIL---DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDID 126
           V + P +  I+   D+Y F K++G G FG+     +  T E  A K I +      ID +
Sbjct: 6   VTTGPLDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIER---GAAID-E 61
Query: 127 DVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           +V+RE+   R L +HPNIV +KE       + ++ME   GGEL++RI N G ++E  A  
Sbjct: 62  NVQREIINHRSL-RHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARF 120
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVG 246
             + +L  V  CH   + HRDLK EN L  DGS   +LK  DFG S       Q    VG
Sbjct: 121 FFQQLLSGVSYCHSMQICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVG 179
Query: 247 SPYYMAPEV-LRRNYGPEI-DVWSAGVIIYILLCGVPPFWAETE----EGIAHAIIRGKI 300
           +P Y+APEV LR+ Y  +I DVWS GV +Y++L G  PF    E          I+  K 
Sbjct: 180 TPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY 239
Query: 301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW-IKN 343
               D   ++S E   L+  +   +P  R+++ E+  + W +KN
Sbjct: 240 SIPDD--IRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN 281

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score =  138 bits (348), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 145/267 (54%), Gaps = 23/267 (8%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           +G G +G   +      G+    K++    + TE +   +  EV ++R L KHPNIV Y 
Sbjct: 14  IGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLREL-KHPNIVRYY 71
Query: 149 EAYEDKD--AIYLVMELCEGGELFDRIVNKG-----HYTERAAAAVGKTILRIVKVCHE- 200
           +   D+    +Y+VME CEGG+L   ++ KG     +  E     V   +   +K CH  
Sbjct: 72  DRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 201 ----NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC-EIVGSPYYMAPEV 255
               + V+HRDLKP N +F DG +N +L   DFGL+      E F  E VG+PYYM+PE 
Sbjct: 131 SDGGHTVLHRDLKPAN-VFLDGKQNVKLG--DFGLARILNHDEDFAKEFVGTPYYMSPEQ 187
Query: 256 LRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           + R +Y  + D+WS G ++Y L   +PPF A +++ +A  I  GK  F R P+ + S E 
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FRRIPY-RYSDEL 244
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWI 341
            E++  ML+   Y+R ++EE+LENP I
Sbjct: 245 NEIITRMLNLKDYHRPSVEEILENPLI 271

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score =  138 bits (348), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 147/286 (51%), Gaps = 18/286 (6%)
Query: 68  RSVVSNPAEGNIL---DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID 124
           R  V+ P +  I+   D+Y   K++G G FG+     + +  E  A K I + +   +ID
Sbjct: 3   RPAVAGPMDLPIMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGE---KID 59
Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
            ++V+RE+   R L +HPNIV +KE       + +VME   GGELF+RI N G ++E  A
Sbjct: 60  -ENVKREIINHRSL-RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA 117
Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI 244
               + ++  V   H   V HRDLK EN L  DGS   +LK  DFG S       Q    
Sbjct: 118 RFFFQQLISGVSYAHAMQVAHRDLKLENTLL-DGSPAPRLKIADFGYSKASVLHSQPKSA 176
Query: 245 VGSPYYMAPEV-LRRNY-GPEIDVWSAGVIIYILLCGVPPFWAETE----EGIAHAIIRG 298
           VG+P Y+APEV L++ Y G   DVWS GV +Y++L G  PF    E        H I+  
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL-- 234
Query: 299 KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW-IKN 343
            + +    +  +S E + L+  +   +P  R+++ E+  + W +KN
Sbjct: 235 NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHEWFLKN 280

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score =  138 bits (347), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 134/263 (50%), Gaps = 17/263 (6%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y   + LG G FG        +T +  A K I+++ LK       V RE+  ++ L +HP
Sbjct: 11  YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHP 69
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
           +I+   +       I +V+E   GGELFD IV K   TE       + I+  ++ CH + 
Sbjct: 70  HIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL--RRNY 260
           ++HRDLKPEN L  D   N  +K  DFGLS     G       GSP Y APEV+  +   
Sbjct: 129 IVHRDLKPENLLLDD---NLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYA 185
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGI---AHAIIRGKIDFERDPWPKVSKEAKEL 317
           GPE+DVWS G+++Y++L G  PF  E    +    ++ +    DF       +S  A+ L
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDF-------LSPGAQSL 238
Query: 318 VKNMLDPNPYNRLTLEEVLENPW 340
           ++ M+  +P  R+T++E+  +PW
Sbjct: 239 IRRMIVADPMQRITIQEIRRDPW 261

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score =  136 bits (343), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 133/297 (44%), Gaps = 33/297 (11%)
Query: 77  GNILDKYTFGKEL-GRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           G   D Y    EL G G +        ++ G+ YA K I K+   +      V REVE +
Sbjct: 8   GKFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSR---SRVFREVETL 64
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
                + NI+   E +ED    YLV E  +GG +   I  + H+ ER A+ V + +   +
Sbjct: 65  YQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAAL 124
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI--------VGS 247
              H  G+ HRDLKPEN L     + S +K  DF L    K       I         GS
Sbjct: 125 DFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGS 184
Query: 248 PYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPF---------WAETE---- 288
             YMAPEV+         Y    D+WS GV++YI+L G PPF         W   E    
Sbjct: 185 AEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRV 244
Query: 289 --EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
               +  +I  GK +F    W  +S EAK+L+  +L  +   RL+  +VL++PW++ 
Sbjct: 245 CQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score =  135 bits (339), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 144/267 (53%), Gaps = 23/267 (8%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           +G G +G   +      G+    K++    + TE +   +  EV ++R L KHPNIV Y 
Sbjct: 14  IGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLREL-KHPNIVRYY 71
Query: 149 EAYEDKD--AIYLVMELCEGGELFDRIVNKG-----HYTERAAAAVGKTILRIVKVCHE- 200
           +   D+    +Y+VME CEGG+L   ++ KG     +  E     V   +   +K CH  
Sbjct: 72  DRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 201 ----NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYYMAPEV 255
               + V+HRDLKP N +F DG +N +L   DFGL+        F +  VG+PYYM+PE 
Sbjct: 131 SDGGHTVLHRDLKPAN-VFLDGKQNVKLG--DFGLARILNHDTSFAKAFVGTPYYMSPEQ 187
Query: 256 LRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           + R +Y  + D+WS G ++Y L   +PPF A +++ +A  I  GK  F R P+ + S E 
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FRRIPY-RYSDEL 244
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWI 341
            E++  ML+   Y+R ++EE+LENP I
Sbjct: 245 NEIITRMLNLKDYHRPSVEEILENPLI 271

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score =  135 bits (339), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 94/267 (35%), Positives = 144/267 (53%), Gaps = 23/267 (8%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           +G G +G   +      G+    K++    + TE +   +  EV ++R L KHPNIV Y 
Sbjct: 14  IGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLREL-KHPNIVRYY 71
Query: 149 EAYEDKD--AIYLVMELCEGGELFDRIVNKG-----HYTERAAAAVGKTILRIVKVCHE- 200
           +   D+    +Y+VME CEGG+L   ++ KG     +  E     V   +   +K CH  
Sbjct: 72  DRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRR 130
Query: 201 ----NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYYMAPEV 255
               + V+HRDLKP N +F DG +N +L   DFGL+        F +  VG+PYYM+PE 
Sbjct: 131 SDGGHTVLHRDLKPAN-VFLDGKQNVKLG--DFGLARILNHDTSFAKTFVGTPYYMSPEQ 187
Query: 256 LRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           + R +Y  + D+WS G ++Y L   +PPF A +++ +A  I  GK  F R P+ + S E 
Sbjct: 188 MNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FRRIPY-RYSDEL 244
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWI 341
            E++  ML+   Y+R ++EE+LENP I
Sbjct: 245 NEIITRMLNLKDYHRPSVEEILENPLI 271

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score =  131 bits (329), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 158/281 (56%), Gaps = 18/281 (6%)
Query: 66  QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEID 124
           +LRS+VS    G+   KYT  +++G+G  G  +   ++ TG+  A +++  +++ K E+ 
Sbjct: 8   KLRSIVS---VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI 64
Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
           I+    E+ +MR   K+PNIV Y ++Y   D +++VME   GG L D +V +    E   
Sbjct: 65  IN----EILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQI 118
Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFA-DGSENSQLKAIDFGLSIFFKPGE-QFC 242
           AAV +  L+ ++  H N V+HRD+K +N L   DGS    +K  DFG      P + +  
Sbjct: 119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRS 174
Query: 243 EIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
           E+VG+PY+MAPEV+ R+ YGP++D+WS G++   ++ G PP+  E      + I      
Sbjct: 175 EMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 234
Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
             ++P  K+S   ++ +   LD +   R + +E+L++ ++K
Sbjct: 235 ELQNP-EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score =  131 bits (329), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 134/297 (45%), Gaps = 33/297 (11%)
Query: 77  GNILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           G   D Y   ++ LG G       C  + T + YA K I K+          V REVE++
Sbjct: 8   GRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIR---SRVFREVEML 64
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
                H N++   E +E++D  YLV E   GG +   I  + H+ E  A+ V + +   +
Sbjct: 65  YQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASAL 124
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI--------VGS 247
              H  G+ HRDLKPEN L    ++ S +K  DFGL    K       I         GS
Sbjct: 125 DFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGS 184
Query: 248 PYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPF---------WAETEEGIA 292
             YMAPEV+         Y    D+WS GVI+YILL G PPF         W   E   A
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244
Query: 293 ------HAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                  +I  GK +F    W  +S  AK+L+  +L  +   RL+  +VL++PW++ 
Sbjct: 245 CQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score =  129 bits (324), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 157/281 (55%), Gaps = 18/281 (6%)
Query: 66  QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEID 124
           +LRS+VS    G+   KYT  +++G+G  G  +   ++ TG+  A +++  +++ K E+ 
Sbjct: 8   KLRSIVS---VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI 64
Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
           I+    E+ +MR   K+PNIV Y ++Y   D +++VME   GG L D +V +    E   
Sbjct: 65  IN----EILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQI 118
Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFA-DGSENSQLKAIDFGLSIFFKPGE-QFC 242
           AAV +  L+ ++  H N V+HRD+K +N L   DGS    +K  DFG      P + +  
Sbjct: 119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRS 174
Query: 243 EIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
            +VG+PY+MAPEV+ R+ YGP++D+WS G++   ++ G PP+  E      + I      
Sbjct: 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 234
Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
             ++P  K+S   ++ +   LD +   R + +E+L++ ++K
Sbjct: 235 ELQNP-EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score =  128 bits (322), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 133/296 (44%), Gaps = 33/296 (11%)
Query: 77  GNILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           G   D Y   ++ LG G       C  + T + YA K I K+          V REVE++
Sbjct: 8   GRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIR---SRVFREVEML 64
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
                H N++   E +E++D  YLV E   GG +   I  + H+ E  A+ V + +   +
Sbjct: 65  YQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASAL 124
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI--------VGS 247
              H  G+ HRDLKPEN L    ++ S +K  DF L    K       I         GS
Sbjct: 125 DFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGS 184
Query: 248 PYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPF---------WAETEEGIA 292
             YMAPEV+         Y    D+WS GVI+YILL G PPF         W   E   A
Sbjct: 185 AEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244
Query: 293 ------HAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
                  +I  GK +F    W  +S  AK+L+  +L  +   RL+  +VL++PW++
Sbjct: 245 CQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score =  127 bits (320), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 137/267 (51%), Gaps = 10/267 (3%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           +D +  G+ LG+G+FG  +   E ++    A K + K +++ E     +RRE+EI  HL 
Sbjct: 22  IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHL- 80
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
            HPNI+     + D+  IYL++E    GEL+  +     + E+  A + + +   +  CH
Sbjct: 81  HHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCH 140
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN          +LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 141 GKKVIHRDIKPEN---LLLGLKGELKIADFGWSV-HAPSLRRKTMCGTLDYLPPEMIEGR 196
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            +  ++D+W  GV+ Y LL G PPF + +       I++  + F       V   A++L+
Sbjct: 197 MHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPAS----VPTGAQDLI 252
Query: 319 KNMLDPNPYNRLTLEEVLENPWIKNDN 345
             +L  NP  RL L +V  +PW++ ++
Sbjct: 253 SKLLRHNPSERLPLAQVSAHPWVRANS 279

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score =  127 bits (319), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 131/252 (51%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K LG G FG       +ETG  YA K + K+K+    +I+    E
Sbjct: 32  NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 92  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN +     +   +K  DFGL+   K   +   + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGLAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score =  127 bits (319), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 157/281 (55%), Gaps = 18/281 (6%)
Query: 66  QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEID 124
           +LRS+VS    G+   KYT  +++G+G  G  +   ++ TG+  A +++  +++ K E+ 
Sbjct: 8   KLRSIVS---VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI 64
Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
           I+    E+ +MR   K+PNIV Y ++Y   D +++VME   GG L D +V +    E   
Sbjct: 65  IN----EILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQI 118
Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFA-DGSENSQLKAIDFGLSIFFKPGE-QFC 242
           AAV +  L+ ++  H N V+HRD+K +N L   DGS    +K  DFG      P + +  
Sbjct: 119 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRS 174
Query: 243 EIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
            +VG+PY+MAPEV+ R+ YGP++D+WS G++   ++ G PP+  E      + I      
Sbjct: 175 XMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP 234
Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
             ++P  K+S   ++ +   L+ +   R + +E+L++ ++K
Sbjct: 235 ELQNP-EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLK 274

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score =  126 bits (317), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 132/225 (58%), Gaps = 17/225 (7%)
Query: 66  QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEID 124
           +LRS+VS    G+   KYT  +++G+G  G  +   ++ TG+  A +++  +++ K E+ 
Sbjct: 9   KLRSIVS---VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI 65
Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
           I+    E+ +MR   K+PNIV Y ++Y   D +++VME   GG L D +V +    E   
Sbjct: 66  IN----EILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQI 119
Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFA-DGSENSQLKAIDFGLSIFFKPGE-QFC 242
           AAV +  L+ ++  H N V+HRD+K +N L   DGS    +K  DFG      P + +  
Sbjct: 120 AAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRS 175
Query: 243 EIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE 286
            +VG+PY+MAPEV+ R+ YGP++D+WS G++   ++ G PP+  E
Sbjct: 176 XMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE 220

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score =  126 bits (317), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 132/259 (50%), Gaps = 22/259 (8%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++ + + K LG+G FG      E  TG  YA K + KE +  + ++     E  ++++  
Sbjct: 4   MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-T 62
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HP +   K A++  D +  VME   GGELF  +  +  +TE  A   G  I+  ++  H
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMA 252
              V++RD+K EN +     ++  +K  DFGL    K G       + FC   G+P Y+A
Sbjct: 123 SRDVVYRDIKLENLML---DKDGHIKITDFGLC---KEGISDGATMKTFC---GTPEYLA 173
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
           PEVL  N YG  +D W  GV++Y ++CG  PF+ +  E +   I+  +I F R     +S
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLS 229
Query: 312 KEAKELVKNMLDPNPYNRL 330
            EAK L+  +L  +P  RL
Sbjct: 230 PEAKSLLAGLLKKDPKQRL 248

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score =  126 bits (316), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 132/259 (50%), Gaps = 22/259 (8%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++ + + K LG+G FG      E  TG  YA K + KE +  + ++     E  ++++  
Sbjct: 9   MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-T 67
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HP +   K A++  D +  VME   GGELF  +  +  +TE  A   G  I+  ++  H
Sbjct: 68  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 127
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMA 252
              V++RD+K EN +     ++  +K  DFGL    K G       + FC   G+P Y+A
Sbjct: 128 SRDVVYRDIKLENLML---DKDGHIKITDFGLC---KEGISDGATMKXFC---GTPEYLA 178
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
           PEVL  N YG  +D W  GV++Y ++CG  PF+ +  E +   I+  +I F R     +S
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLS 234
Query: 312 KEAKELVKNMLDPNPYNRL 330
            EAK L+  +L  +P  RL
Sbjct: 235 PEAKSLLAGLLKKDPKQRL 253

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score =  126 bits (316), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 132/259 (50%), Gaps = 22/259 (8%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++ + + K LG+G FG      E  TG  YA K + KE +  + ++     E  ++++  
Sbjct: 7   MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-T 65
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HP +   K A++  D +  VME   GGELF  +  +  +TE  A   G  I+  ++  H
Sbjct: 66  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 125
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMA 252
              V++RD+K EN +     ++  +K  DFGL    K G       + FC   G+P Y+A
Sbjct: 126 SRDVVYRDIKLENLML---DKDGHIKITDFGLC---KEGISDGATMKTFC---GTPEYLA 176
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
           PEVL  N YG  +D W  GV++Y ++CG  PF+ +  E +   I+  +I F R     +S
Sbjct: 177 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLS 232
Query: 312 KEAKELVKNMLDPNPYNRL 330
            EAK L+  +L  +P  RL
Sbjct: 233 PEAKSLLAGLLKKDPKQRL 251

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score =  126 bits (316), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 132/259 (50%), Gaps = 22/259 (8%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++ + + K LG+G FG      E  TG  YA K + KE +  + ++     E  ++++  
Sbjct: 4   MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-T 62
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HP +   K A++  D +  VME   GGELF  +  +  +TE  A   G  I+  ++  H
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMA 252
              V++RD+K EN +     ++  +K  DFGL    K G       + FC   G+P Y+A
Sbjct: 123 SRDVVYRDIKLENLML---DKDGHIKITDFGLC---KEGISDGATMKXFC---GTPEYLA 173
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
           PEVL  N YG  +D W  GV++Y ++CG  PF+ +  E +   I+  +I F R     +S
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLS 229
Query: 312 KEAKELVKNMLDPNPYNRL 330
            EAK L+  +L  +P  RL
Sbjct: 230 PEAKSLLAGLLKKDPKQRL 248

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score =  126 bits (316), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 132/259 (50%), Gaps = 22/259 (8%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++ + + K LG+G FG      E  TG  YA K + KE +  + ++     E  ++++  
Sbjct: 4   MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-T 62
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HP +   K A++  D +  VME   GGELF  +  +  +TE  A   G  I+  ++  H
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMA 252
              V++RD+K EN +     ++  +K  DFGL    K G       + FC   G+P Y+A
Sbjct: 123 SRDVVYRDIKLENLML---DKDGHIKITDFGLC---KEGISDGATMKTFC---GTPEYLA 173
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
           PEVL  N YG  +D W  GV++Y ++CG  PF+ +  E +   I+  +I F R     +S
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLS 229
Query: 312 KEAKELVKNMLDPNPYNRL 330
            EAK L+  +L  +P  RL
Sbjct: 230 PEAKSLLAGLLKKDPKQRL 248

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score =  126 bits (316), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 131/252 (51%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K LG G FG       +ETG  YA K + K+K+    +I+    E
Sbjct: 32  NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 92  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN +     +   ++  DFGL+   K   +   + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIQVTDFGLAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score =  126 bits (316), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 132/259 (50%), Gaps = 22/259 (8%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++ + + K LG+G FG      E  TG  YA K + KE +  + ++     E  ++++  
Sbjct: 4   MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-T 62
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HP +   K A++  D +  VME   GGELF  +  +  +TE  A   G  I+  ++  H
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMA 252
              V++RD+K EN +     ++  +K  DFGL    K G       + FC   G+P Y+A
Sbjct: 123 SRDVVYRDIKLENLML---DKDGHIKITDFGLC---KEGISDGATMKXFC---GTPEYLA 173
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
           PEVL  N YG  +D W  GV++Y ++CG  PF+ +  E +   I+  +I F R     +S
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLS 229
Query: 312 KEAKELVKNMLDPNPYNRL 330
            EAK L+  +L  +P  RL
Sbjct: 230 PEAKSLLAGLLKKDPKQRL 248

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score =  126 bits (316), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 132/259 (50%), Gaps = 22/259 (8%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++ + + K LG+G FG      E  TG  YA K + KE +  + ++     E  ++++  
Sbjct: 4   MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-T 62
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HP +   K A++  D +  VME   GGELF  +  +  +TE  A   G  I+  ++  H
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMA 252
              V++RD+K EN +     ++  +K  DFGL    K G       + FC   G+P Y+A
Sbjct: 123 SRDVVYRDIKLENLML---DKDGHIKITDFGLC---KEGISDGATMKXFC---GTPEYLA 173
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
           PEVL  N YG  +D W  GV++Y ++CG  PF+ +  E +   I+  +I F R     +S
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLS 229
Query: 312 KEAKELVKNMLDPNPYNRL 330
            EAK L+  +L  +P  RL
Sbjct: 230 PEAKSLLAGLLKKDPKQRL 248

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score =  125 bits (314), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 130/252 (51%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K LG G FG       +ETG  YA K + K+K+     I+    E
Sbjct: 33  NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 93  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   ++  DFG +   K G  +  + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWT-LCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score =  125 bits (314), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K LG G FG       +ETG  YA K + K+K+     I+    E
Sbjct: 32  NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 92  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN +     +   +K  DFG +   K   +   + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score =  125 bits (313), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 130/252 (51%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K LG G FG       +ETG  YA K + K+K+     I+    E
Sbjct: 18  NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 77
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 78  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   ++  DFG +   K G  +  + G+P Y+
Sbjct: 137 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWT-LCGTPEYL 191
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 192 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HF 247
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 248 SSDLKDLLRNLL 259

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score =  125 bits (313), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K LG G FG       +ETG  YA K + K+K+     I+    E
Sbjct: 32  NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 92  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score =  125 bits (313), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K LG G FG       +ETG  YA K + K+K+     I+    E
Sbjct: 33  NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 93  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score =  124 bits (312), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 131/260 (50%), Gaps = 12/260 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K LG G FG       +ETG  YA K + K+K+     I+    E
Sbjct: 32  NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 92  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHF 261
Query: 311 SKEAKELVKNMLDPNPYNRL 330
           S + K+L++N+L  +   R 
Sbjct: 262 SSDLKDLLRNLLQVDLTKRF 281

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score =  124 bits (312), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K LG G FG       +ETG  YA K + K+K+     I+    E
Sbjct: 32  NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 92  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HF 261
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score =  124 bits (312), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K LG G FG       +ETG  YA K + K+K+     I+    E
Sbjct: 32  NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 92  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score =  124 bits (312), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K LG G FG       +ETG  YA K + K+K+     I+    E
Sbjct: 32  NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G + E  A      I
Sbjct: 92  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN +     +   +K  DFG +   K   +   + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score =  124 bits (311), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K +G G FG       +ETG  YA K + K+K+     I+    E
Sbjct: 32  NPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 92  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   +K  DFG +   K   +   + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score =  124 bits (311), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 129/252 (51%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K LG G FG       +ETG  YA K + K+K+     I+    E
Sbjct: 32  NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 92  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN +     +   ++  DFG +   K   +   + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score =  124 bits (310), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K LG G FG       +ETG  YA K + K+K+     I+    E
Sbjct: 33  NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G + E  A      I
Sbjct: 93  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score =  124 bits (310), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K LG G FG       +ETG  YA K + K+K+     I+    E
Sbjct: 32  NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G + E  A      I
Sbjct: 92  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score =  124 bits (310), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K LG G FG       +ETG  YA K + K+K+     I+    E
Sbjct: 33  NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +   + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 93  KRILQAV-NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN +     +   +K  DFG +   K   +   + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score =  124 bits (310), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K LG G FG       +ETG  YA K + K+K+     I+    E
Sbjct: 33  NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +   + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 93  KRILQAV-NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN +     +   +K  DFG +   K   +   + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score =  123 bits (309), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K LG G FG       +ETG  YA K + K+K+     I+    E
Sbjct: 32  NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G + E  A      I
Sbjct: 92  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score =  123 bits (308), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 11/263 (4%)
Query: 71  VSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR 130
           ++ P     ++++ + K LG+G FG      E  TG  YA K + KE +  + ++     
Sbjct: 138 LAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 197
Query: 131 EVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKT 190
           E  ++++  +HP +   K +++  D +  VME   GGELF  +  +  ++E  A   G  
Sbjct: 198 ENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 256
Query: 191 ILRIVKVCH-ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSP 248
           I+  +   H E  V++RDLK EN +     ++  +K  DFGL     K G       G+P
Sbjct: 257 IVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTP 313
Query: 249 YYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
            Y+APEVL  N YG  +D W  GV++Y ++CG  PF+ +  E +   I+  +I F R   
Sbjct: 314 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG 373
Query: 308 PKVSKEAKELVKNMLDPNPYNRL 330
           P    EAK L+  +L  +P  RL
Sbjct: 374 P----EAKSLLSGLLKKDPKQRL 392

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score =  123 bits (308), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 132/263 (50%), Gaps = 11/263 (4%)
Query: 71  VSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR 130
           ++ P     ++++ + K LG+G FG      E  TG  YA K + KE +  + ++     
Sbjct: 141 LAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLT 200
Query: 131 EVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKT 190
           E  ++++  +HP +   K +++  D +  VME   GGELF  +  +  ++E  A   G  
Sbjct: 201 ENRVLQN-SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 259
Query: 191 ILRIVKVCH-ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSP 248
           I+  +   H E  V++RDLK EN +     ++  +K  DFGL     K G       G+P
Sbjct: 260 IVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTP 316
Query: 249 YYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
            Y+APEVL  N YG  +D W  GV++Y ++CG  PF+ +  E +   I+  +I F R   
Sbjct: 317 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLG 376
Query: 308 PKVSKEAKELVKNMLDPNPYNRL 330
           P    EAK L+  +L  +P  RL
Sbjct: 377 P----EAKSLLSGLLKKDPKQRL 395

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score =  123 bits (308), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 129/252 (51%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K +G G FG       +ETG  YA K + K+K+     I+    E
Sbjct: 32  NPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GG++F  +   G ++E  A      I
Sbjct: 92  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   +K  DFG +   K   +   + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HF 261
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score =  123 bits (308), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 127/252 (50%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K LG G FG       +ETG  YA K + K+K+     I+    E
Sbjct: 33  NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +   + +++D   +Y+VME   GGE+F  +   G + E  A      I
Sbjct: 93  KRILQAV-NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN +     +   +K  DFG +   K   +   + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score =  122 bits (307), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 129/252 (51%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K +G G FG       +ETG  YA K + K+K+     I+    E
Sbjct: 32  NPAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GG++F  +   G ++E  A      I
Sbjct: 92  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   +K  DFG +   K   +   + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HF 261
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score =  122 bits (306), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 127/259 (49%), Gaps = 12/259 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F  T    E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 30  EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 88
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + GEL   I   G + E         I+  ++  H 
Sbjct: 89  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 149 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF    +PK    A++
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 261
Query: 317 LVKNMLDPNPYNRLTLEEV 335
           LV+ +L  +   RL  EE+
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score =  122 bits (306), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 131/225 (58%), Gaps = 17/225 (7%)
Query: 66  QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEID 124
           +LR +VS    G+   KYT  +++G+G  G  +   ++ TG+  A +++  +++ K E+ 
Sbjct: 9   KLRIIVS---VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELI 65
Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
           I+    E+ +MR   K+PNIV Y ++Y   D +++VME   GG L D +V +    E   
Sbjct: 66  IN----EILVMRE-NKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQI 119
Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFA-DGSENSQLKAIDFGLSIFFKPGE-QFC 242
           AAV +  L+ ++  H N V+HR++K +N L   DGS    +K  DFG      P + +  
Sbjct: 120 AAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDGS----VKLTDFGFCAQITPEQSKRS 175
Query: 243 EIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE 286
            +VG+PY+MAPEV+ R+ YGP++D+WS G++   ++ G PP+  E
Sbjct: 176 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNE 220

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score =  122 bits (306), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 129/254 (50%), Gaps = 11/254 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++++ + K LG+G FG      E  TG  YA K + KE +  + ++     E  ++++  
Sbjct: 8   MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-S 66
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HP +   K +++  D +  VME   GGELF  +  +  ++E  A   G  I+  +   H
Sbjct: 67  RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 126
Query: 200 -ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR 257
            E  V++RDLK EN +     ++  +K  DFGL     K G       G+P Y+APEVL 
Sbjct: 127 SEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 183
Query: 258 RN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            N YG  +D W  GV++Y ++CG  PF+ +  E +   I+  +I F R   P    EAK 
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGP----EAKS 239
Query: 317 LVKNMLDPNPYNRL 330
           L+  +L  +P  RL
Sbjct: 240 LLSGLLKKDPKQRL 253

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score =  122 bits (306), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K LG G FG        ETG  +A K + K+K+     I+    E
Sbjct: 32  NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 92  KRILQAV-NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 261
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score =  122 bits (305), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 129/254 (50%), Gaps = 11/254 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++++ + K LG+G FG      E  TG  YA K + KE +  + ++     E  ++++  
Sbjct: 7   MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-S 65
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HP +   K +++  D +  VME   GGELF  +  +  ++E  A   G  I+  +   H
Sbjct: 66  RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 125
Query: 200 -ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR 257
            E  V++RDLK EN +     ++  +K  DFGL     K G       G+P Y+APEVL 
Sbjct: 126 SEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 182
Query: 258 RN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            N YG  +D W  GV++Y ++CG  PF+ +  E +   I+  +I F R   P    EAK 
Sbjct: 183 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGP----EAKS 238
Query: 317 LVKNMLDPNPYNRL 330
           L+  +L  +P  RL
Sbjct: 239 LLSGLLKKDPKQRL 252

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score =  122 bits (305), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K LG G FG        ETG  +A K + K+K+     I+    E
Sbjct: 32  NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 92  KRILQAV-NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HF 261
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score =  122 bits (305), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           NPA+    LD++   K LG G FG        ETG  +A K + K+K+     I+    E
Sbjct: 32  NPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNE 91
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 92  KRILQAV-NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 205
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HF 261
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 262 SSDLKDLLRNLL 273

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score =  122 bits (305), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 129/254 (50%), Gaps = 11/254 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++++ + K LG+G FG      E  TG  YA K + KE +  + ++     E  ++++  
Sbjct: 9   MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-S 67
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HP +   K +++  D +  VME   GGELF  +  +  ++E  A   G  I+  +   H
Sbjct: 68  RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 127
Query: 200 -ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR 257
            E  V++RDLK EN +     ++  +K  DFGL     K G       G+P Y+APEVL 
Sbjct: 128 SEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLE 184
Query: 258 RN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            N YG  +D W  GV++Y ++CG  PF+ +  E +   I+  +I F R   P    EAK 
Sbjct: 185 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGP----EAKS 240
Query: 317 LVKNMLDPNPYNRL 330
           L+  +L  +P  RL
Sbjct: 241 LLSGLLKKDPKQRL 254

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score =  121 bits (304), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           +PA+    LD++   K LG G FG        ETG  YA K + K+K+     I+    E
Sbjct: 33  SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 93  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN +     +   +K  DFG +   K   +   + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 129/252 (51%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           +PA+    LD++   K LG G FG        ETG  YA K + K+K+     I+    E
Sbjct: 25  SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 84
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 85  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 143
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   ++  DFG +   K G  +  + G+P Y+
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYL 198
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HF 254
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 255 SSDLKDLLRNLL 266

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           +PA+    LD++   K LG G FG        ETG  YA K + K+K+     I+    E
Sbjct: 33  SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 93  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           +PA+    LD++   K LG G FG        ETG  YA K + K+K+     I+    E
Sbjct: 33  SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 93  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           +PA+    LD++   K LG G FG        ETG  YA K + K+K+     I+    E
Sbjct: 53  SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 112
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 113 KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 171
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 226
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 282
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 283 SSDLKDLLRNLL 294

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           +PA+    LD++   K LG G FG        ETG  YA K + K+K+     I+    E
Sbjct: 33  SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I
Sbjct: 93  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 155/301 (51%), Gaps = 17/301 (5%)
Query: 52  SKHASNVDKKSISF-QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYA 110
           +K +++VD KS    ++  V+ +P     + +Y  G+ LG+G F   ++  +++T E +A
Sbjct: 15  AKPSAHVDPKSAPLKEIPDVLVDP---RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFA 71
Query: 111 CKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELF 170
            K + K  L      + +  E+ I + L  +P++V +   +ED D +Y+V+E+C    L 
Sbjct: 72  GKVVPKSMLLKPHQKEKMSTEIAIHKSL-DNPHVVGFHGFFEDDDFVYVVLEICRRRSLL 130
Query: 171 DRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           +    +   TE  A    +  ++ V+  H N V+HRDLK  N    D   +  +K  DFG
Sbjct: 131 ELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND---DMDVKIGDFG 187
Query: 231 LS--IFFKPGEQFCEIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAET 287
           L+  I F  GE+  ++ G+P Y+APEVL ++ +  E+D+WS G I+Y LL G PPF    
Sbjct: 188 LATKIEFD-GERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 246
Query: 288 EEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHA 347
            +     I + +    R     ++  A  L++ ML  +P  R ++ E+L + +     +A
Sbjct: 247 LKETYIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFF-TSGYA 301
Query: 348 P 348
           P
Sbjct: 302 P 302

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 143/271 (52%), Gaps = 22/271 (8%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++KY   +++G G FG        E G  Y  K+I   ++ ++ + ++ RREV ++ ++ 
Sbjct: 23  MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK-EREESRREVAVLANM- 80
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKG-HYTERAAAAVGKTILRIVKV 197
           KHPNIV Y+E++E+  ++Y+VM+ CEGG+LF RI   KG  + E         I   +K 
Sbjct: 81  KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKH 140
Query: 198 CHENGVMHRDLKPEN-FLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYYMAPEV 255
            H+  ++HRD+K +N FL  DG+    ++  DFG++       +     +G+PYY++PE+
Sbjct: 141 VHDRKILHRDIKSQNIFLTKDGT----VQLGDFGIARVLNSTVELARACIGTPYYLSPEI 196
Query: 256 LR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV---- 310
              + Y  + D+W+ G ++Y L      F A + + +   II G        +P V    
Sbjct: 197 CENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS-------FPPVSLHY 249
Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           S + + LV  +   NP +R ++  +LE  +I
Sbjct: 250 SYDLRSLVSQLFKRNPRDRPSVNSILEKGFI 280

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F       E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 88
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + GEL   I   G + E         I+  ++  H 
Sbjct: 89  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 149 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF    +PK    A++
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 261
Query: 317 LVKNMLDPNPYNRLTLEEV 335
           LV+ +L  +   RL  EE+
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 128/252 (50%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           +PA+    LD++   K LG G FG        ETG  YA K + K+K+     I+    E
Sbjct: 25  SPAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 84
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I++ +   P +V  + +++D   +Y+VME   GGE+F  +   G + E  A      I
Sbjct: 85  KRILQAV-NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 143
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   ++  DFG +   K G  +  + G+P Y+
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYL 198
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HF 254
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 255 SSDLKDLLRNLL 266

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F       E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 90
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + GEL   I   G + E         I+  ++  H 
Sbjct: 91  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF    +PK    A++
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 263
Query: 317 LVKNMLDPNPYNRLTLEEV 335
           LV+ +L  +   RL  EE+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F       E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 33  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 91
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + GEL   I   G + E         I+  ++  H 
Sbjct: 92  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 152 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 208
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF    +PK    A++
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 264
Query: 317 LVKNMLDPNPYNRLTLEEV 335
           LV+ +L  +   RL  EE+
Sbjct: 265 LVEKLLVLDATKRLGCEEM 283

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F       E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 88
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + GEL   I   G + E         I+  ++  H 
Sbjct: 89  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 149 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF    +PK    A++
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 261
Query: 317 LVKNMLDPNPYNRLTLEEV 335
           LV+ +L  +   RL  EE+
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F       E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 30  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 88
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + GEL   I   G + E         I+  ++  H 
Sbjct: 89  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 149 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF    +PK    A++
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 261
Query: 317 LVKNMLDPNPYNRLTLEEV 335
           LV+ +L  +   RL  EE+
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F       E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 90
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + GEL   I   G + E         I+  ++  H 
Sbjct: 91  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF    +PK    A++
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 263
Query: 317 LVKNMLDPNPYNRLTLEEV 335
           LV+ +L  +   RL  EE+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F       E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 29  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 87
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + GEL   I   G + E         I+  ++  H 
Sbjct: 88  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 148 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF    +PK    A++
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 260
Query: 317 LVKNMLDPNPYNRLTLEEV 335
           LV+ +L  +   RL  EE+
Sbjct: 261 LVEKLLVLDATKRLGCEEM 279

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD++   K LG G FG        E+G  YA K + K+K+     I+    E  I++ + 
Sbjct: 27  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 85
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I+   +  H
Sbjct: 86  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 145
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
              +++RDLKPEN L     E   ++  DFG +   K   +   + G+P Y+APE +L +
Sbjct: 146 SLDLIYRDLKPENLLI---DEQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 200
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        S + K+L+
Sbjct: 201 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLL 256
Query: 319 KNML 322
           +N+L
Sbjct: 257 RNLL 260

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 154/301 (51%), Gaps = 17/301 (5%)
Query: 52  SKHASNVDKKSISF-QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYA 110
           +K +++VD KS    ++  V+ +P     + +Y  G+ LG+G F   ++  +++T E +A
Sbjct: 15  AKPSAHVDPKSAPLKEIPDVLVDP---RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFA 71
Query: 111 CKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELF 170
            K + K  L      + +  E+ I + L  +P++V +   +ED D +Y+V+E+C    L 
Sbjct: 72  GKVVPKSMLLKPHQKEKMSTEIAIHKSL-DNPHVVGFHGFFEDDDFVYVVLEICRRRSLL 130
Query: 171 DRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           +    +   TE  A    +  ++ V+  H N V+HRDLK  N    D   +  +K  DFG
Sbjct: 131 ELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND---DMDVKIGDFG 187
Query: 231 LS--IFFKPGEQFCEIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAET 287
           L+  I F  GE+   + G+P Y+APEVL ++ +  E+D+WS G I+Y LL G PPF    
Sbjct: 188 LATKIEFD-GERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 246
Query: 288 EEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHA 347
            +     I + +    R     ++  A  L++ ML  +P  R ++ E+L + +     +A
Sbjct: 247 LKETYIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFF-TSGYA 301
Query: 348 P 348
           P
Sbjct: 302 P 302

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score =  120 bits (301), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 154/301 (51%), Gaps = 17/301 (5%)
Query: 52  SKHASNVDKKSISF-QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYA 110
           +K +++VD KS    ++  V+ +P     + +Y  G+ LG+G F   ++  +++T E +A
Sbjct: 15  AKPSAHVDPKSAPLKEIPDVLVDP---RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFA 71
Query: 111 CKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELF 170
            K + K  L      + +  E+ I + L  +P++V +   +ED D +Y+V+E+C    L 
Sbjct: 72  GKVVPKSMLLKPHQKEKMSTEIAIHKSL-DNPHVVGFHGFFEDDDFVYVVLEICRRRSLL 130
Query: 171 DRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           +    +   TE  A    +  ++ V+  H N V+HRDLK  N    D   +  +K  DFG
Sbjct: 131 ELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND---DMDVKIGDFG 187
Query: 231 LS--IFFKPGEQFCEIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAET 287
           L+  I F  GE+   + G+P Y+APEVL ++ +  E+D+WS G I+Y LL G PPF    
Sbjct: 188 LATKIEFD-GERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSC 246
Query: 288 EEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHA 347
            +     I + +    R     ++  A  L++ ML  +P  R ++ E+L + +     +A
Sbjct: 247 LKETYIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFF-TSGYA 301
Query: 348 P 348
           P
Sbjct: 302 P 302

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F       E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 33  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 91
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + GEL   I   G + E         I+  ++  H 
Sbjct: 92  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 152 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF    +PK    A++
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 264
Query: 317 LVKNMLDPNPYNRLTLEEV 335
           LV+ +L  +   RL  EE+
Sbjct: 265 LVEKLLVLDATKRLGCEEM 283

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 127/259 (49%), Gaps = 21/259 (8%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           +D + F + LG+G FG        ETG+ YA K + K+ +  + D++    E  I+    
Sbjct: 22  IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
            HP +      ++  D ++ VME   GG+L   I     + E  A      I+  +   H
Sbjct: 82  NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLH 141
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-------EQFCEIVGSPYYMA 252
           + G+++RDLK +N L          K  DFG+    K G         FC   G+P Y+A
Sbjct: 142 DKGIIYRDLKLDNVLL---DHEGHCKLADFGMC---KEGICNGVTTATFC---GTPDYIA 192
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
           PE+L+   YGP +D W+ GV++Y +LCG  PF AE E+ +  AI+  ++ +    W  + 
Sbjct: 193 PEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--W--LH 248
Query: 312 KEAKELVKNMLDPNPYNRL 330
           ++A  ++K+ +  NP  RL
Sbjct: 249 EDATGILKSFMTKNPTMRL 267

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 123/244 (50%), Gaps = 11/244 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD++   K LG G FG        E+G  YA K + K+K+     I+    E  I++ + 
Sbjct: 61  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 119
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I+   +  H
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 179
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
              +++RDLKPEN L     +   ++  DFG +   K       + G+P Y+APE +L +
Sbjct: 180 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGAT--WTLCGTPEYLAPEIILSK 234
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        S + K+L+
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLL 290
Query: 319 KNML 322
           +N+L
Sbjct: 291 RNLL 294

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F       E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 29  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 87
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + GEL   I   G + E         I+  ++  H 
Sbjct: 88  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 148 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF    +PK    A++
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 260
Query: 317 LVKNMLDPNPYNRLTLEEV 335
           LV+ +L  +   RL  EE+
Sbjct: 261 LVEKLLVLDATKRLGCEEM 279

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F       E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 90
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + GEL   I   G + E         I+  ++  H 
Sbjct: 91  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF    +PK    A++
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 263
Query: 317 LVKNMLDPNPYNRLTLEEV 335
           LV+ +L  +   RL  EE+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F       E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 37  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 95
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + GEL   I   G + E         I+  ++  H 
Sbjct: 96  HPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 155
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 156 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF    +PK    A++
Sbjct: 213 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 268
Query: 317 LVKNMLDPNPYNRLTLEEV 335
           LV+ +L  +   RL  EE+
Sbjct: 269 LVEKLLVLDATKRLGCEEM 287

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F       E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 90
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + GEL   I   G + E         I+  ++  H 
Sbjct: 91  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF    +PK    A++
Sbjct: 208 EKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK----ARD 263
Query: 317 LVKNMLDPNPYNRLTLEEV 335
           LV+ +L  +   RL  EE+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD++   K LG G FG        E+G  YA K + K+K+     I+    E  I++ + 
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I+   +  H
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
              +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNML 322
           +N+L
Sbjct: 270 RNLL 273

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD++   K LG G FG        E+G  YA K + K+K+     I+    E  I++ + 
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I+   +  H
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
              +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLAGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNML 322
           +N+L
Sbjct: 270 RNLL 273

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F       E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 14  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 72
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + GEL   I   G + E         I+  ++  H 
Sbjct: 73  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 132
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 133 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF    +PK    A++
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 245
Query: 317 LVKNMLDPNPYNRLTLEEV 335
           LV+ +L  +   RL  EE+
Sbjct: 246 LVEKLLVLDATKRLGCEEM 264

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F       E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 7   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 65
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + GEL   I   G + E         I+  ++  H 
Sbjct: 66  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 125
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 126 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF    +PK    A++
Sbjct: 183 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 238
Query: 317 LVKNMLDPNPYNRLTLEEV 335
           LV+ +L  +   RL  EE+
Sbjct: 239 LVEKLLVLDATKRLGCEEM 257

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F       E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 8   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 66
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + GEL   I   G + E         I+  ++  H 
Sbjct: 67  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 126
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 127 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF    +PK    A++
Sbjct: 184 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 239
Query: 317 LVKNMLDPNPYNRLTLEEV 335
           LV+ +L  +   RL  EE+
Sbjct: 240 LVEKLLVLDATKRLGCEEM 258

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score =  119 bits (299), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD++   K LG G FG        E+G  YA K + K+K+     I+    E  I++ + 
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I+   +  H
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
              +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLXGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNML 322
           +N+L
Sbjct: 270 RNLL 273

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score =  119 bits (299), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD++   K LG G FG        E+G  YA K + K+K+     I+    E  I++ + 
Sbjct: 41  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 99
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I+   +  H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
              +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+APE +L +
Sbjct: 160 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 214
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        S + K+L+
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 270
Query: 319 KNML 322
           +N+L
Sbjct: 271 RNLL 274

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score =  119 bits (299), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F       E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 35  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 93
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + GEL   I   G + E         I+  ++  H 
Sbjct: 94  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 153
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 154 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF    +PK    A++
Sbjct: 211 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFPK----ARD 266
Query: 317 LVKNMLDPNPYNRLTLEEV 335
           LV+ +L  +   RL  EE+
Sbjct: 267 LVEKLLVLDATKRLGCEEM 285

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score =  119 bits (299), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD++   K LG G FG        E+G  YA K + K+K+     I+    E  I++ + 
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I+   +  H
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
              +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNML 322
           +N+L
Sbjct: 270 RNLL 273

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  119 bits (299), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD++   K LG G FG        E+G  YA K + K+K+     I+    E  I++ + 
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I+   +  H
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
              +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLL 269
Query: 319 KNML 322
           +N+L
Sbjct: 270 RNLL 273

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  119 bits (299), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD++   K LG G FG        E+G  YA K + K+K+     I+    E  I++ + 
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I+   +  H
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
              +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLL 269
Query: 319 KNML 322
           +N+L
Sbjct: 270 RNLL 273

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score =  119 bits (299), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F       E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 9   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 67
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + GEL   I   G + E         I+  ++  H 
Sbjct: 68  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 127
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 128 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF    +PK    A++
Sbjct: 185 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 240
Query: 317 LVKNMLDPNPYNRLTLEEV 335
           LV+ +L  +   RL  EE+
Sbjct: 241 LVEKLLVLDATKRLGCEEM 259

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score =  119 bits (299), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F       E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 10  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 68
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + GEL   I   G + E         I+  ++  H 
Sbjct: 69  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 128
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 129 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 185
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF    +PK    A++
Sbjct: 186 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 241
Query: 317 LVKNMLDPNPYNRLTLEEV 335
           LV+ +L  +   RL  EE+
Sbjct: 242 LVEKLLVLDATKRLGCEEM 260

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score =  119 bits (299), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 126/259 (48%), Gaps = 12/259 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F       E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 90
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + GEL   I   G + E         I+  ++  H 
Sbjct: 91  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF    +PK    A++
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPK----ARD 263
Query: 317 LVKNMLDPNPYNRLTLEEV 335
           LV+ +L  +   RL  EE+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score =  119 bits (298), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD++   K LG G FG        E+G  YA K + K+K+     I+    E  I++ + 
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I+   +  H
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
              +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNML 322
           +N+L
Sbjct: 270 RNLL 273

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score =  119 bits (298), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 11/244 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD++   K LG G FG        E+G  YA K + K+K+     I+    E  I++ + 
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I+   +  H
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
              +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNML 322
           +N+L
Sbjct: 270 RNLL 273

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score =  119 bits (297), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 140/292 (47%), Gaps = 37/292 (12%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEI---------------- 123
           L++YT   E+G+G +G+    +       YA K ++K+KL  +                 
Sbjct: 12  LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 124 -------DIDDVRREVEIMRHLPKHPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV 174
                   I+ V +E+ I++ L  HPN+V   E  +D  +D +Y+V EL   G + + + 
Sbjct: 72  GCIQPRGPIEQVYQEIAILKKL-DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-VP 129
Query: 175 NKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF 234
                +E  A    + +++ ++  H   ++HRD+KP N L     E+  +K  DFG+S  
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNE 186
Query: 235 FKPGEQFCE-IVGSPYYMAPEVLRRNY----GPEIDVWSAGVIIYILLCGVPPFWAETEE 289
           FK  +      VG+P +MAPE L        G  +DVW+ GV +Y  + G  PF  E   
Sbjct: 187 FKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246
Query: 290 GIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
            +   I    ++F   P   ++++ K+L+  MLD NP +R+ + E+  +PW+
Sbjct: 247 CLHSKIKSQALEFPDQP--DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score =  119 bits (297), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/252 (30%), Positives = 127/252 (50%), Gaps = 12/252 (4%)
Query: 73  NPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           +PA+    LD++   + LG G FG        ETG  YA K + K+K+     I+    E
Sbjct: 33  SPAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNE 92
Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             I + +   P +V  + +++D   +Y+V+E   GGE+F  +   G ++E  A      I
Sbjct: 93  KRIQQAV-NFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +   +  H   +++RDLKPEN L     +   +K  DFG +   K   +   + G+P Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVKG--RTWXLCGTPEYL 206
Query: 252 APE-VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE +L + Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH----F 262
Query: 311 SKEAKELVKNML 322
           S + K+L++N+L
Sbjct: 263 SSDLKDLLRNLL 274

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score =  119 bits (297), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 123/244 (50%), Gaps = 11/244 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD++   K LG G FG        E+G  YA K + K+K+     I+    E  I++ + 
Sbjct: 61  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 119
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P +V  + +++D   +Y+VME   GGE+F  +   G + E  A      I+   +  H
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 179
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
              +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+APE +L +
Sbjct: 180 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 234
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        S + K+L+
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLL 290
Query: 319 KNML 322
           +N+L
Sbjct: 291 RNLL 294

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score =  119 bits (297), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 123/244 (50%), Gaps = 11/244 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD++   K LG G FG        E+G  YA K + K+K+     I+    E  I++ + 
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P +V  + +++D   +Y+VME   GGE+F  +   G + E  A      I+   +  H
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
              +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNML 322
           +N+L
Sbjct: 270 RNLL 273

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score =  118 bits (296), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 123/244 (50%), Gaps = 11/244 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD++   K LG G FG        E+G  YA K + K+K+     I+    E  I++ + 
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P +V  + +++D   +Y+VME   GGE+F  +   G + E  A      I+   +  H
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
              +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNML 322
           +N+L
Sbjct: 270 RNLL 273

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score =  118 bits (296), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 149/295 (50%), Gaps = 16/295 (5%)
Query: 50  SVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETY 109
           S  +    V  +     L+ VV      + LD +    ++G G  GI        +G+  
Sbjct: 46  SPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLV 102
Query: 110 ACKKI-AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGE 168
           A KK+  +++ + E+  +    EV IMR   +H N+V    +Y   D +++VME  EGG 
Sbjct: 103 AVKKMDLRKQQRRELLFN----EVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGA 157
Query: 169 LFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID 228
           L D IV      E   AAV   +L+ + V H  GV+HRD+K ++ L    + + ++K  D
Sbjct: 158 LTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSD 213
Query: 229 FGL-SIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAE 286
           FG  +   K   +   +VG+PY+MAPE++ R  YGPE+D+WS G+++  ++ G PP++ E
Sbjct: 214 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 273
Query: 287 TEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
                A  +IR  +        KVS   K  +  +L  +P  R T  E+L++P++
Sbjct: 274 PPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 327

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  118 bits (296), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 123/244 (50%), Gaps = 11/244 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD++   K LG G FG        E+G  YA K + K+K+     I+    E  I++ + 
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P +V  + +++D   +Y+VME   GGE+F  +   G + E  A      I+   +  H
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
              +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNML 322
           +N+L
Sbjct: 270 RNLL 273

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score =  118 bits (296), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 149/295 (50%), Gaps = 16/295 (5%)
Query: 50  SVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETY 109
           S  +    V  +     L+ VV      + LD +    ++G G  GI        +G+  
Sbjct: 123 SPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLV 179
Query: 110 ACKKI-AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGE 168
           A KK+  +++ + E+  +    EV IMR   +H N+V    +Y   D +++VME  EGG 
Sbjct: 180 AVKKMDLRKQQRRELLFN----EVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGA 234
Query: 169 LFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID 228
           L D IV      E   AAV   +L+ + V H  GV+HRD+K ++ L    + + ++K  D
Sbjct: 235 LTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSD 290
Query: 229 FGL-SIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAE 286
           FG  +   K   +   +VG+PY+MAPE++ R  YGPE+D+WS G+++  ++ G PP++ E
Sbjct: 291 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 350
Query: 287 TEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
                A  +IR  +        KVS   K  +  +L  +P  R T  E+L++P++
Sbjct: 351 PPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 404

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score =  118 bits (296), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 123/244 (50%), Gaps = 11/244 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD++   K LG G FG        E+G  YA K + K+K+     I+    E  I++ + 
Sbjct: 35  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 93
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P +V  + +++D   +Y+VME   GGE+F  +   G + E  A      I+   +  H
Sbjct: 94  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 153
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
              +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+APE +L +
Sbjct: 154 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 208
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        S + K+L+
Sbjct: 209 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 264
Query: 319 KNML 322
           +N+L
Sbjct: 265 RNLL 268

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score =  118 bits (296), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 148/295 (50%), Gaps = 16/295 (5%)
Query: 50  SVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETY 109
           S  +    V  +     L+ VV      + LD +    ++G G  GI        +G+  
Sbjct: 1   SPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLV 57
Query: 110 ACKKI-AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGE 168
           A KK+  +++ + E+  +    EV IMR   +H N+V    +Y   D +++VME  EGG 
Sbjct: 58  AVKKMDLRKQQRRELLFN----EVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGA 112
Query: 169 LFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID 228
           L D IV      E   AAV   +L+ + V H  GV+HRD+K ++ L    + + ++K  D
Sbjct: 113 LTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSD 168
Query: 229 FGLSI-FFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAE 286
           FG      K   +   +VG+PY+MAPE++ R  YGPE+D+WS G+++  ++ G PP++ E
Sbjct: 169 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 228
Query: 287 TEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
                A  +IR  +        KVS   K  +  +L  +P  R T  E+L++P++
Sbjct: 229 PPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 282

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score =  118 bits (296), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 148/295 (50%), Gaps = 16/295 (5%)
Query: 50  SVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETY 109
           S  +    V  +     L+ VV      + LD +    ++G G  GI        +G+  
Sbjct: 3   SPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLV 59
Query: 110 ACKKI-AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGE 168
           A KK+  +++ + E+  +    EV IMR   +H N+V    +Y   D +++VME  EGG 
Sbjct: 60  AVKKMDLRKQQRRELLFN----EVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLEGGA 114
Query: 169 LFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID 228
           L D IV      E   AAV   +L+ + V H  GV+HRD+K ++ L    + + ++K  D
Sbjct: 115 LTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSD 170
Query: 229 FGLSI-FFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAE 286
           FG      K   +   +VG+PY+MAPE++ R  YGPE+D+WS G+++  ++ G PP++ E
Sbjct: 171 FGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 230
Query: 287 TEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
                A  +IR  +        KVS   K  +  +L  +P  R T  E+L++P++
Sbjct: 231 PPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 284

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score =  118 bits (296), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 125/252 (49%), Gaps = 11/252 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD++   K LG G FG        E+G  YA K + K+K+     I+    E  I++ + 
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P +V  + +++D   +Y+VME   GGE+F  +   G + E  A      I+   +  H
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
              +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNMLDPNPYNRL 330
           +N+L  +   R 
Sbjct: 270 RNLLQVDLTKRF 281

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score =  118 bits (295), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 136/257 (52%), Gaps = 13/257 (5%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           ++G G  GI        +G+  A KK+  +++ + E+  +    EV IMR   +H N+V 
Sbjct: 31  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN----EVVIMRDY-QHENVVE 85
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
              +Y   D +++VME  EGG L D IV      E   AAV   +L+ + V H  GV+HR
Sbjct: 86  MYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 144
Query: 207 DLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEI 264
           D+K ++ L    + + ++K  DFG      K   +   +VG+PY+MAPE++ R  YGPE+
Sbjct: 145 DIKSDSILL---THDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 265 DVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDP 324
           D+WS G+++  ++ G PP++ E     A  +IR  +        KVS   K  +  +L  
Sbjct: 202 DIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 260
Query: 325 NPYNRLTLEEVLENPWI 341
           +P  R T  E+L++P++
Sbjct: 261 DPAQRATAAELLKHPFL 277

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score =  118 bits (295), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 125/259 (48%), Gaps = 12/259 (4%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F       E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 32  EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 90
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + G L   I   G + E         I+  ++  H 
Sbjct: 91  HPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF    +PK    A++
Sbjct: 208 EKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPK----ARD 263
Query: 317 LVKNMLDPNPYNRLTLEEV 335
           LV+ +L  +   RL  EE+
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score =  118 bits (295), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 136/257 (52%), Gaps = 13/257 (5%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           ++G G  GI        +G+  A KK+  +++ + E+  +    EV IMR   +H N+V 
Sbjct: 27  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN----EVVIMRDY-QHENVVE 81
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
              +Y   D +++VME  EGG L D IV      E   AAV   +L+ + V H  GV+HR
Sbjct: 82  MYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 140
Query: 207 DLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEI 264
           D+K ++ L    + + ++K  DFG      K   +   +VG+PY+MAPE++ R  YGPE+
Sbjct: 141 DIKSDSILL---THDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 265 DVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDP 324
           D+WS G+++  ++ G PP++ E     A  +IR  +        KVS   K  +  +L  
Sbjct: 198 DIWSLGIMVIEMVDGEPPYFNEPPLK-AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVR 256
Query: 325 NPYNRLTLEEVLENPWI 341
           +P  R T  E+L++P++
Sbjct: 257 DPAQRATAAELLKHPFL 273

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score =  117 bits (294), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 126/252 (50%), Gaps = 11/252 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD++   K LG G FG        E+G  YA K + K+K+     I+    E  I++ + 
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I+   +  H
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
              +++RDLKPEN +     +   ++  DFG +   K   +   + G+P Y+APE ++ +
Sbjct: 159 SLDLIYRDLKPENLII---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEIIISK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNMLDPNPYNRL 330
           +N+L  +   R 
Sbjct: 270 RNLLQVDLTKRF 281

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 134/275 (48%), Gaps = 22/275 (8%)
Query: 75  AEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD-----VR 129
            EG    KY+    LG G FG      + E  +    K I KEK+  +  I+D     V 
Sbjct: 18  CEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVT 77
Query: 130 REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGG-ELFDRIVNKGHYTERAAAAVG 188
            E+ I+  + +H NI+   + +E++    LVME    G +LF  I       E  A+ + 
Sbjct: 78  LEIAILSRV-EHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIF 136
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
           + ++  V       ++HRD+K EN + A   E+  +K IDFG + + + G+ F    G+ 
Sbjct: 137 RQLVSAVGYLRLKDIIHRDIKDENIVIA---EDFTIKLIDFGSAAYLERGKLFYTFCGTI 193
Query: 249 YYMAPEVLRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP 306
            Y APEVL  N   GPE+++WS GV +Y L+    PF  E EE +  AI          P
Sbjct: 194 EYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF-CELEETVEAAI---------HP 243
Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
              VSKE   LV  +L P P  R TLE+++ +PW+
Sbjct: 244 PYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWV 278

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/244 (30%), Positives = 123/244 (50%), Gaps = 11/244 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD++   K LG G FG        E+G  YA K + K+K+     I+    E  I++ + 
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I+   +  H
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
              +++RDLKPEN L     +   ++  DFG +   K   +   + G+P Y+AP  +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPAIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNML 322
           +N+L
Sbjct: 270 RNLL 273

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score =  116 bits (291), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 145/288 (50%), Gaps = 13/288 (4%)
Query: 64  SFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEI 123
           S  L+ +     +   + +Y  G+ LG+G F   ++  +++T E +A K + K  L    
Sbjct: 9   SAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPH 68
Query: 124 DIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA 183
             + +  E+ I + L  +P++V +   +ED D +Y+V+E+C    L +    +   TE  
Sbjct: 69  QKEKMSTEIAIHKSL-DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE 127
Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQF 241
           A    +  ++ V+  H N V+HRDLK  N    D   +  +K  DFGL+  I F  GE+ 
Sbjct: 128 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLND---DMDVKIGDFGLATKIEFD-GERK 183
Query: 242 CEIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI 300
            ++ G+P Y+APEVL ++ +  E+D+WS G I+Y LL G PPF     +     I + + 
Sbjct: 184 KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY 243
Query: 301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
              R     ++  A  L++ ML  +P  R ++ E+L + +     +AP
Sbjct: 244 SVPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFF-TSGYAP 286

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score =  116 bits (290), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 125/252 (49%), Gaps = 11/252 (4%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD++   K LG G FG        E+G  YA K + K+K+     I+    E  I++ + 
Sbjct: 40  LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV- 98
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P +V  + +++D   +Y+VME   GGE+F  +   G ++E  A      I+   +  H
Sbjct: 99  NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-VLRR 258
              +++RDLKPEN L     +   ++  DFG +   K   +   + G+P  +APE +L +
Sbjct: 159 SLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG--RTWXLCGTPEALAPEIILSK 213
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F        S + K+L+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL 269
Query: 319 KNMLDPNPYNRL 330
           +N+L  +   R 
Sbjct: 270 RNLLQVDLTKRF 281

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score =  115 bits (289), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 133/258 (51%), Gaps = 13/258 (5%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           ++G G  GI     E  TG+  A KK+  +++ + E+  +    EV IMR    H N+V 
Sbjct: 52  KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFN----EVVIMRDY-HHDNVVD 106
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
              +Y   D +++VME  EGG L D IV      E   A V  ++LR +   H  GV+HR
Sbjct: 107 MYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHR 165
Query: 207 DLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEI 264
           D+K ++ L    + + ++K  DFG      K   +   +VG+PY+MAPEV+ R  YG E+
Sbjct: 166 DIKSDSILL---TSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 265 DVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDP 324
           D+WS G+++  ++ G PP++ E     A   IR  +        KVS   +  +  ML  
Sbjct: 223 DIWSLGIMVIEMIDGEPPYFNEPPLQ-AMRRIRDSLPPRVKDLHKVSSVLRGFLDLMLVR 281
Query: 325 NPYNRLTLEEVLENPWIK 342
            P  R T +E+L +P++K
Sbjct: 282 EPSQRATAQELLGHPFLK 299

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 148/298 (49%), Gaps = 41/298 (13%)
Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVR-REVEIM 135
           +++KY    ++G G +G+  +C   +TG+  A KK     L++E D  I  +  RE+ ++
Sbjct: 1   MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF----LESEDDPVIKKIALREIRML 56
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
           + L KHPN+V   E +  K  ++LV E C+   L +    +    E    ++    L+ V
Sbjct: 57  KQL-KHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAV 115
Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPE 254
             CH++  +HRD+KPEN L    +++S +K  DFG + +   P + + + V + +Y +PE
Sbjct: 116 NFCHKHNCIHRDVKPENILI---TKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPE 172
Query: 255 VL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------EGIAHAIIRGKIDFER 304
           +L     YGP +DVW+ G +   LL GVP +  +++        + +   I R +  F  
Sbjct: 173 LLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFST 232
Query: 305 ----------DP---------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                     DP         +P +S  A  L+K  L  +P  RLT E++L +P+ +N
Sbjct: 233 NQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFEN 290

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 146/286 (51%), Gaps = 27/286 (9%)
Query: 62  SISFQLRSV-VSNPAEGNILDKYTFGKELGRGEFGITHQCFEI---ETGETYACKKIAK- 116
           ++  +LR+  ++  AE   ++ +   K LG G +G      +I   +TG+ YA K + K 
Sbjct: 34  TVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKA 93
Query: 117 ---EKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI 173
              +K KT    +  R E +++ H+ + P +VT   A++ +  ++L+++   GGELF  +
Sbjct: 94  TIVQKAKT---TEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL 150
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI 233
             +  +TE         I+  ++  H+ G+++RD+K EN L      N  +   DFGLS 
Sbjct: 151 SQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSK 207
Query: 234 FFKPGEQ-----FCEIVGSPYYMAPEVLR---RNYGPEIDVWSAGVIIYILLCGVPPFWA 285
            F   E      FC   G+  YMAP+++R     +   +D WS GV++Y LL G  PF  
Sbjct: 208 EFVADETERAYDFC---GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTV 264
Query: 286 ETEEGIAHAIIRGKIDFERDPWPK-VSKEAKELVKNMLDPNPYNRL 330
           + E+  + A I  +I     P+P+ +S  AK+L++ +L  +P  RL
Sbjct: 265 DGEKN-SQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRL 309

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 134/268 (50%), Gaps = 19/268 (7%)
Query: 89  LGRGEFGITHQCFEI---ETGETYACKKIAKEKL-KTEIDIDDVRREVEIMRHLPKHPNI 144
           LG+G +G   Q  ++    TG+ +A K + K  + +   D    + E  I+  + KHP I
Sbjct: 25  LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFI 83
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
           V    A++    +YL++E   GGELF ++  +G + E  A      I   +   H+ G++
Sbjct: 84  VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGII 143
Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLRRN-YGP 262
           +RDLKPEN +    +    +K  DFGL       G       G+  YMAPE+L R+ +  
Sbjct: 144 YRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNR 200
Query: 263 EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNML 322
            +D WS G ++Y +L G PPF  E  +     I++ K++      P +++EA++L+K +L
Sbjct: 201 AVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLL 256
Query: 323 DPNPYNRLT-----LEEVLENPWIKNDN 345
             N  +RL        EV  +P+ ++ N
Sbjct: 257 KRNAASRLGAGPGDAGEVQAHPFFRHIN 284

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 134/268 (50%), Gaps = 19/268 (7%)
Query: 89  LGRGEFGITHQCFEI---ETGETYACKKIAKEKL-KTEIDIDDVRREVEIMRHLPKHPNI 144
           LG+G +G   Q  ++    TG+ +A K + K  + +   D    + E  I+  + KHP I
Sbjct: 25  LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFI 83
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
           V    A++    +YL++E   GGELF ++  +G + E  A      I   +   H+ G++
Sbjct: 84  VDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGII 143
Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLRRN-YGP 262
           +RDLKPEN +    +    +K  DFGL       G       G+  YMAPE+L R+ +  
Sbjct: 144 YRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNR 200
Query: 263 EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNML 322
            +D WS G ++Y +L G PPF  E  +     I++ K++      P +++EA++L+K +L
Sbjct: 201 AVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLL 256
Query: 323 DPNPYNRLT-----LEEVLENPWIKNDN 345
             N  +RL        EV  +P+ ++ N
Sbjct: 257 KRNAASRLGAGPGDAGEVQAHPFFRHIN 284

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score =  112 bits (280), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 37  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 97  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 157 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 213
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      IIRG++ F +    +VS E 
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 263
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 292

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score =  112 bits (280), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 52  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 172 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 228
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      IIRG++ F +    +VS E 
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 278
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 307

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score =  112 bits (280), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 148/284 (52%), Gaps = 28/284 (9%)
Query: 67  LRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEIDI 125
           LR VV       +LD Y    ++G G  GI     E  +G   A K +  +++ + E+  
Sbjct: 34  LRMVVDQGDPRLLLDSYV---KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF 90
Query: 126 DDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAA 185
           +    EV IMR   +H N+V   ++Y   + ++++ME  +GG L D IV++    E   A
Sbjct: 91  N----EVVIMRDY-QHFNVVEMYKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIA 144
Query: 186 AVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEI 244
            V + +L+ +   H  GV+HRD+K ++ L    + + ++K  DFG      K   +   +
Sbjct: 145 TVCEAVLQALAYLHAQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDVPKRKXL 201
Query: 245 VGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE 303
           VG+PY+MAPEV+ R+ Y  E+D+WS G+++  ++ G PP+++++        ++      
Sbjct: 202 VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-------VQAMKRLR 254
Query: 304 RDPWP------KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
             P P      KVS   ++ ++ ML  +P  R T +E+L++P++
Sbjct: 255 DSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFL 298

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score =  112 bits (279), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 9   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 69  SSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 129 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 185
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      IIRG++ F +    +VS E 
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 235
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 236 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 264

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score =  112 bits (279), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 10  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 70  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 130 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 186
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      IIRG++ F +    +VS E 
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 236
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 265

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score =  112 bits (279), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 57  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 117 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 176
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 177 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 233
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      IIRG++ F +    +VS E 
Sbjct: 234 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXEC 283
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 284 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 312

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score =  112 bits (279), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 10  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 70  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 130 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 186
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      IIRG++ F +    +VS E 
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 236
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 265

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score =  111 bits (278), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 52  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 172 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 228
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      IIRG++ F +    +VS E 
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXEC 278
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 279 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 307

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score =  111 bits (278), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 24  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 84  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 144 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 200
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      IIRG++ F +    +VS E 
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 250
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 251 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 279

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score =  111 bits (278), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 44  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 163
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 164 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 220
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      IIRG++ F +    +VS E 
Sbjct: 221 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 270
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 271 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 299

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score =  111 bits (278), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 10  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 70  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 130 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 186
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      IIRG++ F +    +VS E 
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 236
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 237 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 265

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score =  111 bits (278), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 25  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 85  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 145 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 201
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      IIRG++ F +    +VS E 
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 251
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 252 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 280

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 24  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 84  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 144 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 200
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      IIRG++ F +    +VS E 
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXEC 250
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 251 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 279

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 25  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 85  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 145 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 201
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      IIRG++ F +    +VS E 
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXEC 251
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 252 QHLIRWCLALRPXDRPTFEEIQNHPWMQD 280

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score =  111 bits (278), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 126/272 (46%), Gaps = 22/272 (8%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKE---KLKTEIDIDDVRREVEIMR 136
           L  +   + LG G FG  H       G  YA K + KE   +LK     +D R    +M 
Sbjct: 5   LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDER----LML 60
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
            +  HP I+     ++D   I+++M+  EGGELF  +     +    A      +   ++
Sbjct: 61  SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALE 120
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
             H   +++RDLKPEN L     +N  +K  DFG + +  P   +  + G+P Y+APEV+
Sbjct: 121 YLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYV-PDVTY-XLCGTPDYIAPEVV 175
Query: 257 R-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
             + Y   ID WS G++IY +L G  PF+          I+  ++ F     P  +++ K
Sbjct: 176 STKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVK 231
Query: 316 ELVKNMLDPNPYNRL-----TLEEVLENPWIK 342
           +L+  ++  +   RL       E+V  +PW K
Sbjct: 232 DLLSRLITRDLSQRLGNLQNGTEDVKNHPWFK 263

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 25  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 85  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 145 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 201
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      IIRG++ F +    +VS E 
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXEC 251
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 252 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 280

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 9   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 69  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 129 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 185
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      IIRG++ F +    +VS E 
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 235
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 236 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 264

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 5   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 65  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 125 HCHNXGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 181
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      IIRG++ F +    +VS E 
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXEC 231
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 260

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 8   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 68  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 127
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 128 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 184
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      IIRG++ F +    +VS E 
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 234
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 235 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 263

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 130/255 (50%), Gaps = 16/255 (6%)
Query: 89  LGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV 145
           LG+G F    +CFEI   +T E +A K + K  L      + +  E+ I R L  H ++V
Sbjct: 29  LGKGGFA---KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVV 84
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMH 205
            +   +ED D +++V+ELC    L +    +   TE  A    + I+   +  H N V+H
Sbjct: 85  GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 144
Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL-RRNYGPE 263
           RDLK  N      +E+ ++K  DFGL+   +  GE+   + G+P Y+APEVL ++ +  E
Sbjct: 145 RDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 201
Query: 264 IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD 323
           +DVWS G I+Y LL G PPF     +     I + +    +     ++  A  L++ ML 
Sbjct: 202 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQ 257
Query: 324 PNPYNRLTLEEVLEN 338
            +P  R T+ E+L +
Sbjct: 258 TDPTARPTINELLND 272

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 130/255 (50%), Gaps = 16/255 (6%)
Query: 89  LGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV 145
           LG+G F    +CFEI   +T E +A K + K  L      + +  E+ I R L  H ++V
Sbjct: 25  LGKGGFA---KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVV 80
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMH 205
            +   +ED D +++V+ELC    L +    +   TE  A    + I+   +  H N V+H
Sbjct: 81  GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 140
Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL-RRNYGPE 263
           RDLK  N      +E+ ++K  DFGL+   +  GE+   + G+P Y+APEVL ++ +  E
Sbjct: 141 RDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 264 IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD 323
           +DVWS G I+Y LL G PPF     +     I + +    +     ++  A  L++ ML 
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQ 253
Query: 324 PNPYNRLTLEEVLEN 338
            +P  R T+ E+L +
Sbjct: 254 TDPTARPTINELLND 268

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 130/255 (50%), Gaps = 16/255 (6%)
Query: 89  LGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV 145
           LG+G F    +CFEI   +T E +A K + K  L      + +  E+ I R L  H ++V
Sbjct: 25  LGKGGFA---KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVV 80
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMH 205
            +   +ED D +++V+ELC    L +    +   TE  A    + I+   +  H N V+H
Sbjct: 81  GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 140
Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL-RRNYGPE 263
           RDLK  N      +E+ ++K  DFGL+   +  GE+   + G+P Y+APEVL ++ +  E
Sbjct: 141 RDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 264 IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD 323
           +DVWS G I+Y LL G PPF     +     I + +    +     ++  A  L++ ML 
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQ 253
Query: 324 PNPYNRLTLEEVLEN 338
            +P  R T+ E+L +
Sbjct: 254 TDPTARPTINELLND 268

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score =  111 bits (277), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 32  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 92  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 151
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 152 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 208
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      IIRG++ F +    +VS E 
Sbjct: 209 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSXEC 258
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 259 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 287

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score =  110 bits (276), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 5   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 65  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 125 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 181
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      IIRG++ F +    +VS E 
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSEC 231
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 260

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 130/255 (50%), Gaps = 16/255 (6%)
Query: 89  LGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV 145
           LG+G F    +CFEI   +T E +A K + K  L      + +  E+ I R L  H ++V
Sbjct: 47  LGKGGFA---KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVV 102
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMH 205
            +   +ED D +++V+ELC    L +    +   TE  A    + I+   +  H N V+H
Sbjct: 103 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 162
Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL-RRNYGPE 263
           RDLK  N      +E+ ++K  DFGL+   +  GE+   + G+P Y+APEVL ++ +  E
Sbjct: 163 RDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 219
Query: 264 IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD 323
           +DVWS G I+Y LL G PPF     +     I + +    +     ++  A  L++ ML 
Sbjct: 220 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQ 275
Query: 324 PNPYNRLTLEEVLEN 338
            +P  R T+ E+L +
Sbjct: 276 TDPTARPTINELLND 290

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 130/255 (50%), Gaps = 16/255 (6%)
Query: 89  LGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV 145
           LG+G F    +CFEI   +T E +A K + K  L      + +  E+ I R L  H ++V
Sbjct: 49  LGKGGFA---KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVV 104
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMH 205
            +   +ED D +++V+ELC    L +    +   TE  A    + I+   +  H N V+H
Sbjct: 105 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 164
Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL-RRNYGPE 263
           RDLK  N      +E+ ++K  DFGL+   +  GE+   + G+P Y+APEVL ++ +  E
Sbjct: 165 RDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 221
Query: 264 IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD 323
           +DVWS G I+Y LL G PPF     +     I + +    +     ++  A  L++ ML 
Sbjct: 222 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQ 277
Query: 324 PNPYNRLTLEEVLEN 338
            +P  R T+ E+L +
Sbjct: 278 TDPTARPTINELLND 292

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score =  110 bits (274), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 138/285 (48%), Gaps = 18/285 (6%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
           ++ +   + LG G +G         T E  A K +    +K  +D  +++++E+ I + L
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 63  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
           H  G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+
Sbjct: 122 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           L+R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+   
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 237
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW----IKNDNHAPNVSLGG 354
              L+  +L  NP  R+T+ ++ ++ W    +K     P V+ GG
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGG 282

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score =  110 bits (274), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 138/285 (48%), Gaps = 18/285 (6%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
           ++ +   + LG G +G         T E  A K +    +K  +D  +++++E+ I + L
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 62  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
           H  G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           L+R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+   
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW----IKNDNHAPNVSLGG 354
              L+  +L  NP  R+T+ ++ ++ W    +K     P V+ GG
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGG 281

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score =  110 bits (274), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 130/255 (50%), Gaps = 16/255 (6%)
Query: 89  LGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV 145
           LG+G F    +CFEI   +T E +A K + K  L      + +  E+ I R L  H ++V
Sbjct: 23  LGKGGFA---KCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVV 78
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMH 205
            +   +ED D +++V+ELC    L +    +   TE  A    + I+   +  H N V+H
Sbjct: 79  GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 138
Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL-RRNYGPE 263
           RDLK  N      +E+ ++K  DFGL+   +  GE+   + G+P Y+APEVL ++ +  E
Sbjct: 139 RDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 195
Query: 264 IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD 323
           +DVWS G I+Y LL G PPF     +     I + +    +     ++  A  L++ ML 
Sbjct: 196 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKH----INPVAASLIQKMLQ 251
Query: 324 PNPYNRLTLEEVLEN 338
            +P  R T+ E+L +
Sbjct: 252 TDPTARPTINELLND 266

>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase From Arabidopsis Thaliana Length = 166

Iteration: 1
 Score =  109 bits (273), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 52/116 (44%), Positives = 80/116 (68%)
Query: 361 KQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV 420
           KQFS  NKFKK  LRV+A++L ++++A +K+ F  +D DK+G +TFEELK GL  +G  +
Sbjct: 1   KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANL 60
Query: 421 SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
            + ++  L +AADVD +G +   EF+  ++HL +I  +D L  AF +FDK+ SG+I
Sbjct: 61  KESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYI 116

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score =  109 bits (273), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 124/265 (46%), Gaps = 9/265 (3%)
Query: 68  RSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD 127
           R   SN  +   L  + F   LG+G FG         T E YA K + K+ +  + D++ 
Sbjct: 6   RKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVEC 65
Query: 128 VRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAV 187
              E  ++  L K P +      ++  D +Y VME   GG+L   I   G + E  A   
Sbjct: 66  TMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFY 125
Query: 188 GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVG 246
              I   +   H+ G+++RDLK +N +         +K  DFG+       G    E  G
Sbjct: 126 AAEISIGLFFLHKRGIIYRDLKLDNVML---DSEGHIKIADFGMCKEHMMDGVTTREFCG 182
Query: 247 SPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD 305
           +P Y+APE++  + YG  +D W+ GV++Y +L G PPF  E E+ +  +I+   + + + 
Sbjct: 183 TPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK- 241
Query: 306 PWPKVSKEAKELVKNMLDPNPYNRL 330
               +SKEA  + K ++  +P  RL
Sbjct: 242 ---SLSKEAVSICKGLMTKHPAKRL 263

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 138/285 (48%), Gaps = 18/285 (6%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
           ++ +   + LG G +G         T E  A K +    +K  +D  +++++E+ I + L
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 63  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
           H  G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+
Sbjct: 122 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           L+R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+   
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 237
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW----IKNDNHAPNVSLGG 354
              L+  +L  NP  R+T+ ++ ++ W    +K     P V+ GG
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGG 282

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 138/285 (48%), Gaps = 18/285 (6%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
           ++ +   + LG G +G         T E  A K +    +K  +D  +++++E+ I + L
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 63  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
           H  G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+
Sbjct: 122 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           L+R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+   
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 237
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW----IKNDNHAPNVSLGG 354
              L+  +L  NP  R+T+ ++ ++ W    +K     P V+ GG
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGG 282

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score =  109 bits (272), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 138/285 (48%), Gaps = 18/285 (6%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
           ++ +   + LG G +G         T E  A K +    +K  +D  +++++E+ I + L
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 63  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
           H  G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+
Sbjct: 122 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           L+R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+   
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 237
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW----IKNDNHAPNVSLGG 354
              L+  +L  NP  R+T+ ++ ++ W    +K     P V+ GG
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGG 282

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score =  109 bits (272), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 38  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 98  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 158 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 214
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      II G++ F +    +VS E 
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSEC 264
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 293

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score =  109 bits (272), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 38  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 98  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 158 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 214
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      II G++ F +    +VS E 
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSEC 264
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 293

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score =  109 bits (272), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 37  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 97  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 157 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 213
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      II G++ F +    +VS E 
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSEC 263
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 292

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score =  109 bits (272), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 37  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 97  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 157 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 213
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      II G++ F +    +VS E 
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSEC 263
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 292

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score =  108 bits (271), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 38  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 98  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 158 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 214
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      II G++ F +    +VS E 
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSXEC 264
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 293

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score =  108 bits (271), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 131/276 (47%), Gaps = 18/276 (6%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y   K +GRG FG         T + YA K ++K ++    D      E +IM      P
Sbjct: 76  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSP 134
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
            +V    A++D   +Y+VME   GG+L + + N     E+ A      ++  +   H  G
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMG 193
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEI-VGSPYYMAPEVLRRN- 259
            +HRD+KP+N L     ++  LK  DFG  +   K G   C+  VG+P Y++PEVL+   
Sbjct: 194 FIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 260 ----YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK--IDFERDPWPKVSKE 313
               YG E D WS GV +Y +L G  PF+A++  G    I+  K  + F  D    +SKE
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKE 308
Query: 314 AKELVKNMLDPNP--YNRLTLEEVLENPWIKNDNHA 347
           AK L+   L        R  +EE+  + + KND  A
Sbjct: 309 AKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWA 344

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score =  108 bits (271), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 38  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 98  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 158 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 214
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      II G++ F +    +VS E 
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSXEC 264
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 265 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 293

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score =  108 bits (271), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 131/276 (47%), Gaps = 18/276 (6%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y   K +GRG FG         T + YA K ++K ++    D      E +IM      P
Sbjct: 71  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSP 129
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
            +V    A++D   +Y+VME   GG+L + + N     E+ A      ++  +   H  G
Sbjct: 130 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMG 188
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEI-VGSPYYMAPEVLRRN- 259
            +HRD+KP+N L     ++  LK  DFG  +   K G   C+  VG+P Y++PEVL+   
Sbjct: 189 FIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 245
Query: 260 ----YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK--IDFERDPWPKVSKE 313
               YG E D WS GV +Y +L G  PF+A++  G    I+  K  + F  D    +SKE
Sbjct: 246 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKE 303
Query: 314 AKELVKNMLDPNP--YNRLTLEEVLENPWIKNDNHA 347
           AK L+   L        R  +EE+  + + KND  A
Sbjct: 304 AKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWA 339

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score =  108 bits (271), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 131/276 (47%), Gaps = 18/276 (6%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y   K +GRG FG         T + YA K ++K ++    D      E +IM      P
Sbjct: 76  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSP 134
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
            +V    A++D   +Y+VME   GG+L + + N     E+ A      ++  +   H  G
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMG 193
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEI-VGSPYYMAPEVLRRN- 259
            +HRD+KP+N L     ++  LK  DFG  +   K G   C+  VG+P Y++PEVL+   
Sbjct: 194 FIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQG 250
Query: 260 ----YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK--IDFERDPWPKVSKE 313
               YG E D WS GV +Y +L G  PF+A++  G    I+  K  + F  D    +SKE
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDD--NDISKE 308
Query: 314 AKELVKNMLDPNP--YNRLTLEEVLENPWIKNDNHA 347
           AK L+   L        R  +EE+  + + KND  A
Sbjct: 309 AKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWA 344

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score =  108 bits (271), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 37  QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 97  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 157 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 213
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      II G++ F +    +VS E 
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSXEC 263
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 264 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 292

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 126/254 (49%), Gaps = 24/254 (9%)
Query: 87  KELGRGEFG---ITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVE--IMRHLPKH 141
           K LG+G FG   +  +    ++G  YA K + K  LK     D VR ++E  I+  +  H
Sbjct: 34  KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVR---DRVRTKMERDILADV-NH 89
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           P +V    A++ +  +YL+++   GG+LF R+  +  +TE         +   +   H  
Sbjct: 90  PFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSL 149
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSI----FFKPGEQFCEIVGSPYYMAPEVL- 256
           G+++RDLKPEN L     E   +K  DFGLS       K    FC   G+  YMAPEV+ 
Sbjct: 150 GIIYRDLKPENILL---DEEGHIKLTDFGLSKEAIDHEKKAYSFC---GTVEYMAPEVVN 203
Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
           R+ +    D WS GV+++ +L G  PF  +  +     I++ K+   +     +S EA+ 
Sbjct: 204 RQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ----FLSTEAQS 259
Query: 317 LVKNMLDPNPYNRL 330
           L++ +   NP NRL
Sbjct: 260 LLRALFKRNPANRL 273

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 131/269 (48%), Gaps = 20/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHL 138
           +Y  G  LG G FG  +    +      A K + K+++    ++ +  R   EV +++ +
Sbjct: 5   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 139 PK-HPNIVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                 ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+
Sbjct: 65  SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 124
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +
Sbjct: 125 HCHNCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWI 181
Query: 257 R--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R  R +G    VWS G+++Y ++CG  PF  + E      II G++ F +    +VS E 
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIGGQVFFRQ----RVSSEC 231
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           + L++  L   P +R T EE+  +PW+++
Sbjct: 232 QHLIRWCLALRPSDRPTFEEIQNHPWMQD 260

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 30/269 (11%)
Query: 72  SNPAEGNILDKYTFGKELGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDV 128
           ++P++  +L      K LG+G FG      +I   +  + YA K + K  LK     D V
Sbjct: 21  ADPSQFELL------KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR---DRV 71
Query: 129 RREVE--IMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           R ++E  I+  +  HP IV    A++ +  +YL+++   GG+LF R+  +  +TE     
Sbjct: 72  RTKMERDILVEV-NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF 130
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI----FFKPGEQFC 242
               +   +   H  G+++RDLKPEN L     E   +K  DFGLS       K    FC
Sbjct: 131 YLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFC 187
Query: 243 EIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
              G+  YMAPEV+ RR +    D WS GV+++ +L G  PF  +  +     I++ K+ 
Sbjct: 188 ---GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG 244
Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRL 330
             +     +S EA+ L++ +   NP NRL
Sbjct: 245 MPQF----LSPEAQSLLRMLFKRNPANRL 269

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 24/259 (9%)
Query: 82  KYTFGKELGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDVRREVE--IMR 136
           ++   K LG+G FG      +I   +  + YA K + K  LK     D VR ++E  I+ 
Sbjct: 26  QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR---DRVRTKMERDILV 82
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
            +  HP IV    A++ +  +YL+++   GG+LF R+  +  +TE         +   + 
Sbjct: 83  EV-NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD 141
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI----FFKPGEQFCEIVGSPYYMA 252
             H  G+++RDLKPEN L     E   +K  DFGLS       K    FC   G+  YMA
Sbjct: 142 HLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFC---GTVEYMA 195
Query: 253 PEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
           PEV+ RR +    D WS GV+++ +L G  PF  +  +     I++ K+   +     +S
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF----LS 251
Query: 312 KEAKELVKNMLDPNPYNRL 330
            EA+ L++ +   NP NRL
Sbjct: 252 PEAQSLLRMLFKRNPANRL 270

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D Y   + +G G   +    +     E  A K+I  EK +T   +D++ +E++ M     
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT--SMDELLKEIQAMSQC-H 71
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFD---RIVNKGHYT-----ERAAAAVGKTIL 192
           HPNIV+Y  ++  KD ++LVM+L  GG + D    IV KG +      E   A + + +L
Sbjct: 72  HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE------IVG 246
             ++  H+NG +HRD+K  N L     E+  ++  DFG+S F   G            VG
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 247 SPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPF 283
           +P +MAPEV+   R Y  + D+WS G+    L  G  P+
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 227

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 133/273 (48%), Gaps = 18/273 (6%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y   K +GRG FG         + + YA K ++K ++    D      E +IM      P
Sbjct: 77  YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FANSP 135
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
            +V    A++D   +Y+VME   GG+L + + N     E+ A      ++  +   H  G
Sbjct: 136 WVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMG 194
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-KPGEQFCEI-VGSPYYMAPEVLRRN- 259
           ++HRD+KP+N L     ++  LK  DFG  +   + G   C+  VG+P Y++PEVL+   
Sbjct: 195 LIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQG 251
Query: 260 ----YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAII--RGKIDFERDPWPKVSKE 313
               YG E D WS GV ++ +L G  PF+A++  G    I+  +  + F  D   ++SK 
Sbjct: 252 GDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPED--AEISKH 309
Query: 314 AKELVKNMLDPNP--YNRLTLEEVLENPWIKND 344
           AK L+   L        R  +EE+ ++P+ KND
Sbjct: 310 AKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 342

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D Y   + +G G   +    +     E  A K+I  EK +T   +D++ +E++ M     
Sbjct: 10  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQT--SMDELLKEIQAMSQC-H 66
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFD---RIVNKGHYT-----ERAAAAVGKTIL 192
           HPNIV+Y  ++  KD ++LVM+L  GG + D    IV KG +      E   A + + +L
Sbjct: 67  HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE------IVG 246
             ++  H+NG +HRD+K  N L     E+  ++  DFG+S F   G            VG
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 247 SPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPF 283
           +P +MAPEV+   R Y  + D+WS G+    L  G  P+
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 222

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score =  107 bits (267), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 132/269 (49%), Gaps = 30/269 (11%)
Query: 72  SNPAEGNILDKYTFGKELGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDV 128
           ++P++  +L      K LG+G FG      +I   +  + YA K + K  LK     D V
Sbjct: 21  ADPSQFELL------KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR---DRV 71
Query: 129 RREVE--IMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           R ++E  I+  +  HP IV    A++ +  +YL+++   GG+LF R+  +  +TE     
Sbjct: 72  RTKMERDILVEV-NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF 130
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI----FFKPGEQFC 242
               +   +   H  G+++RDLKPEN L     E   +K  DFGLS       K    FC
Sbjct: 131 YLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFC 187
Query: 243 EIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
              G+  YMAPEV+ RR +    D WS GV+++ +L G  PF  +  +     I++ K+ 
Sbjct: 188 ---GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG 244
Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRL 330
             +     +S EA+ L++ +   NP NRL
Sbjct: 245 MPQF----LSPEAQSLLRMLFKRNPANRL 269

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score =  107 bits (266), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
           ++ +   + LG G +G         T E  A K +    +K  +D  +++++E+ I + L
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEIXINKML 62
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 63  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
           H  G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+
Sbjct: 122 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 178
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           L+R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+   
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 237
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
              L+  +L  NP  R+T+ ++ ++ W
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRW 264

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  106 bits (265), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
           ++ +   + LG G +G         T E  A K +    +K  +D  +++++E+ I + L
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEIXINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 62  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
           H  G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           L+R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+   
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
              L+  +L  NP  R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  106 bits (265), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
           ++ +   + LG G +G         T E  A K +    +K  +D  +++++E+ I + L
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEIXINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 62  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
           H  G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           L+R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+   
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
              L+  +L  NP  R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score =  105 bits (263), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
           ++ +   + LG G +G         T E  A K +    +K  +D  +++++E+ I + L
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 62  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
           H  G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           L+R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+   
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
              L+  +L  NP  R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  105 bits (263), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
           ++ +   + LG G +G         T E  A K +    +K  +D  +++++E+ I + L
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 62  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
           H  G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           L+R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+   
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
              L+  +L  NP  R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score =  105 bits (263), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
           ++ +   + LG G +G         T E  A K +    +K  +D  +++++E+ I + L
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 63  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
           H  G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+
Sbjct: 122 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           L+R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+   
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 237
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
              L+  +L  NP  R+T+ ++ ++ W
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRW 264

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score =  105 bits (263), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
           ++ +   + LG G +G         T E  A K +    +K  +D  +++++E+ I + L
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 62  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
           H  G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           L+R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+   
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
              L+  +L  NP  R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score =  105 bits (263), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
           ++ +   + LG G +G         T E  A K +    +K  +D  +++++E+ I + L
Sbjct: 4   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 60
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 61  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 119
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
           H  G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+
Sbjct: 120 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 176
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           L+R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+   
Sbjct: 177 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 235
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
              L+  +L  NP  R+T+ ++ ++ W
Sbjct: 236 PLALLHKILVENPSARITIPDIKKDRW 262

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  105 bits (263), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
           ++ +   + LG G +G         T E  A K +    +K  +D  +++++E+ I + L
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 62  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
           H  G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           L+R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+   
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
              L+  +L  NP  R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score =  105 bits (262), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
           ++ +   + LG G +G         T E  A K +    +K  +D  +++++E+ I + L
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 62  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
           H  G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           L+R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+   
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
              L+  +L  NP  R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  105 bits (262), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
           ++ +   + LG G +G         T E  A K +    +K  +D  +++++E+ I + L
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 62  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
           H  G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           L+R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+   
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
              L+  +L  NP  R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score =  105 bits (262), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
           ++ +   + LG G +G         T E  A K +    +K  +D  +++++E+ I + L
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 62  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
           H  G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           L+R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+   
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
              L+  +L  NP  R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score =  105 bits (262), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
           ++ +   + LG G +G         T E  A K +    +K  +D  +++++E+ I + L
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 62
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 63  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
           H  G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+
Sbjct: 122 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           L+R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+   
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 237
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
              L+  +L  NP  R+T+ ++ ++ W
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRW 264

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score =  105 bits (261), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 131/267 (49%), Gaps = 14/267 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
           ++ +   + LG G +G         T E  A K +    +K  +D  +++++E+ I + L
Sbjct: 5   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 62  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
           H  G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           L+R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+   
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
              L+  +L  NP  R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score =  104 bits (260), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 14/267 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
           ++ +   + LG G +G         T E  A K +    +K  +D  +++++E+ I   L
Sbjct: 6   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINAML 62
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 63  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
           H  G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+
Sbjct: 122 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           L+R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+   
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 237
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
              L+  +L  NP  R+T+ ++ ++ W
Sbjct: 238 PLALLHKILVENPSARITIPDIKKDRW 264

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 139/275 (50%), Gaps = 34/275 (12%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           +G G +G  ++   ++TG+  A K +      T  + +++++E+ +++    H NI TY 
Sbjct: 32  VGNGTYGQVYKGRHVKTGQLAAIKVMDV----TGDEEEEIKQEINMLKKYSHHRNIATYY 87
Query: 149 EAYEDK------DAIYLVMELCEGGELFDRIVNKGHYT--ERAAAAVGKTILRIVKVCHE 200
            A+  K      D ++LVME C  G + D I N    T  E   A + + ILR +   H+
Sbjct: 88  GAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ 147
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-KPGEQFCEIVGSPYYMAPEVLRRN 259
           + V+HRD+K +N L    +EN+++K +DFG+S    +   +    +G+PY+MAPEV+  +
Sbjct: 148 HKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACD 204
Query: 260 YGPEI------DVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV--- 310
             P+       D+WS G+    +  G PP             +R      R+P P++   
Sbjct: 205 ENPDATYDFKSDLWSLGITAIEMAEGAPPL-------CDMHPMRALFLIPRNPAPRLKSK 257
Query: 311 --SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
             SK+ +  +++ L  N   R   E+++++P+I++
Sbjct: 258 KWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score =  103 bits (258), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 130/267 (48%), Gaps = 14/267 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-DDVRREVEIMRHL 138
           ++ +   + LG G  G         T E  A K +    +K  +D  +++++E+ I + L
Sbjct: 5   VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIV---DMKRAVDCPENIKKEICINKML 61
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 62  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
           H  G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+
Sbjct: 121 HGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           L+R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+   
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSA 236
Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPW 340
              L+  +L  NP  R+T+ ++ ++ W
Sbjct: 237 PLALLHKILVENPSARITIPDIKKDRW 263

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score =  103 bits (256), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 18/262 (6%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L  +   + +GRG +         +T   YA K + KE +  + DID V+ E  +     
Sbjct: 19  LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
            HP +V     ++ +  ++ V+E   GG+L   +  +    E  A      I   +   H
Sbjct: 79  NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR- 257
           E G+++RDLK +N L         +K  D+G+     +PG+      G+P Y+APE+LR 
Sbjct: 139 ERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG 195
Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPF---------WAETEEGIAHAIIRGKIDFERDPWP 308
            +YG  +D W+ GV+++ ++ G  PF            TE+ +   I+  +I   R    
Sbjct: 196 EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR---- 251
Query: 309 KVSKEAKELVKNMLDPNPYNRL 330
            +S +A  ++K+ L+ +P  RL
Sbjct: 252 SMSVKAASVLKSFLNKDPKERL 273

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score =  103 bits (256), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 18/262 (6%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L  +   + +GRG +         +T   YA K + KE +  + DID V+ E  +     
Sbjct: 4   LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
            HP +V     ++ +  ++ V+E   GG+L   +  +    E  A      I   +   H
Sbjct: 64  NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR- 257
           E G+++RDLK +N L         +K  D+G+     +PG+      G+P Y+APE+LR 
Sbjct: 124 ERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG 180
Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPF---------WAETEEGIAHAIIRGKIDFERDPWP 308
            +YG  +D W+ GV+++ ++ G  PF            TE+ +   I+  +I   R    
Sbjct: 181 EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR---- 236
Query: 309 KVSKEAKELVKNMLDPNPYNRL 330
            +S +A  ++K+ L+ +P  RL
Sbjct: 237 SLSVKAASVLKSFLNKDPKERL 258

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score =  102 bits (255), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 132/274 (48%), Gaps = 16/274 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
            D +   + +G+G FG      + +T + YA K + K+K     ++ +V +E++IM+ L 
Sbjct: 14  FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL- 72
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HP +V    +++D++ +++V++L  GG+L   +    H+ E         ++  +    
Sbjct: 73  EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQ 132
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRN 259
              ++HRD+KP+N L     E+  +   DF ++       Q   + G+  YMAPE+    
Sbjct: 133 NQRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSR 189
Query: 260 ----YGPEIDVWSAGVIIYILLCGVPPFW---AETEEGIAHAIIRGKIDFERDPWPKVSK 312
               Y   +D WS GV  Y LL G  P+    + + + I H      + +    W   S+
Sbjct: 190 KGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP-SAW---SQ 245
Query: 313 EAKELVKNMLDPNPYNRLT-LEEVLENPWIKNDN 345
           E   L+K +L+PNP  R + L +V   P++ + N
Sbjct: 246 EMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDIN 279

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score =  102 bits (255), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 144 IVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
           ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+ CH  G
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR--RNY 260
           V+HRD+K EN L        +LK IDFG     K    + +  G+  Y  PE +R  R +
Sbjct: 178 VLHRDIKDENILI--DLNRGELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
           G    VWS G+++Y ++CG  PF  + E      IIRG++ F +    +VS E + L++ 
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ----RVSSECQHLIRW 284
Query: 321 MLDPNPYNRLTLEEVLENPWIKN 343
            L   P +R T EE+  +PW+++
Sbjct: 285 CLALRPSDRPTFEEIQNHPWMQD 307

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score =  102 bits (255), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 121/262 (46%), Gaps = 18/262 (6%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L  +   + +GRG +         +T   YA K + KE +  + DID V+ E  +     
Sbjct: 8   LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
            HP +V     ++ +  ++ V+E   GG+L   +  +    E  A      I   +   H
Sbjct: 68  NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR- 257
           E G+++RDLK +N L         +K  D+G+     +PG+      G+P Y+APE+LR 
Sbjct: 128 ERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRG 184
Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPF---------WAETEEGIAHAIIRGKIDFERDPWP 308
            +YG  +D W+ GV+++ ++ G  PF            TE+ +   I+  +I   R    
Sbjct: 185 EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR---- 240
Query: 309 KVSKEAKELVKNMLDPNPYNRL 330
            +S +A  ++K+ L+ +P  RL
Sbjct: 241 SLSVKAASVLKSFLNKDPKERL 262

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score =  102 bits (254), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 135/275 (49%), Gaps = 18/275 (6%)
Query: 65  FQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID 124
           FQ +  +      N L  +   K++GRG+F   ++   +  G   A KK+    L     
Sbjct: 16  FQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKA 75
Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
             D  +E+++++ L  HPN++ Y  ++ + + + +V+EL + G+L  R++   H+ ++  
Sbjct: 76  RADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVLELADAGDL-SRMIK--HFKKQKR 131
Query: 185 AAVGKTILR-IVKVC------HENGVMHRDLKPEN-FLFADGSENSQLKAIDFGLSIFFK 236
               +T+ +  V++C      H   VMHRD+KP N F+ A G     +K  D GL  FF 
Sbjct: 132 LIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGV----VKLGDLGLGRFFS 187
Query: 237 PGEQFCE-IVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHA 294
                   +VG+PYYM+PE +  N Y  + D+WS G ++Y +     PF+ +     +  
Sbjct: 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC 247
Query: 295 IIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNR 329
               + D+   P    S+E ++LV   ++P+P  R
Sbjct: 248 KKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKR 282

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score =  102 bits (254), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 18/262 (6%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L  +   + +GRG +         +T   YA + + KE +  + DID V+ E  +     
Sbjct: 51  LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
            HP +V     ++ +  ++ V+E   GG+L   +  +    E  A      I   +   H
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 170
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR- 257
           E G+++RDLK +N L         +K  D+G+     +PG+      G+P Y+APE+LR 
Sbjct: 171 ERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRG 227
Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPF---------WAETEEGIAHAIIRGKIDFERDPWP 308
            +YG  +D W+ GV+++ ++ G  PF            TE+ +   I+  +I   R    
Sbjct: 228 EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR---- 283
Query: 309 KVSKEAKELVKNMLDPNPYNRL 330
            +S +A  ++K+ L+ +P  RL
Sbjct: 284 SLSVKAASVLKSFLNKDPKERL 305

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score =  100 bits (250), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 133/272 (48%), Gaps = 16/272 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++ +   K LG+G FG        +T + +A K + K+ +  + D++    E  ++    
Sbjct: 17  IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HP +      ++ K+ ++ VME   GG+L   I +   +    A      I+  ++  H
Sbjct: 77  EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 136
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE----QFCEIVGSPYYMAPEV 255
             G+++RDLK +N L     ++  +K  DFG+      G+    +FC   G+P Y+APE+
Sbjct: 137 SKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNEFC---GTPDYIAPEI 190
Query: 256 LR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           L  + Y   +D WS GV++Y +L G  PF  + EE + H+I      + R  W  + KEA
Sbjct: 191 LLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR--W--LEKEA 246
Query: 315 KELVKNMLDPNPYNRLTLE-EVLENPWIKNDN 345
           K+L+  +    P  RL +  ++ ++P  +  N
Sbjct: 247 KDLLVKLFVREPEKRLGVRGDIRQHPLFREIN 278

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 136/296 (45%), Gaps = 38/296 (12%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++KY   +++G G +G+ ++  +   GET+A KKI  EK    I    +R E+ I++ L 
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKEL- 57
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
           KH NIV   +    K  + LV E  +    +L D  V +G      A +    +L  +  
Sbjct: 58  KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAY 115
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL 256
           CH+  V+HRDLKP+N L    +   +LK  DFGL+  F  P  ++   V + +Y AP+VL
Sbjct: 116 CHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVL 172
Query: 257 --RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
              + Y   ID+WS G I   ++ G P F   +E      I R         WP V++  
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 315 K-------------------------ELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           K                         +L+  ML  +P  R+T ++ LE+ + K +N
Sbjct: 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 136/296 (45%), Gaps = 38/296 (12%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++KY   +++G G +G+ ++  +   GET+A KKI  EK    I    +R E+ I++ L 
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKEL- 57
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
           KH NIV   +    K  + LV E  +    +L D  V +G      A +    +L  +  
Sbjct: 58  KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAY 115
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL 256
           CH+  V+HRDLKP+N L    +   +LK  DFGL+  F  P  ++   V + +Y AP+VL
Sbjct: 116 CHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVL 172
Query: 257 --RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
              + Y   ID+WS G I   ++ G P F   +E      I R         WP V++  
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 315 K-------------------------ELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           K                         +L+  ML  +P  R+T ++ LE+ + K +N
Sbjct: 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 132/272 (48%), Gaps = 16/272 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++ +   K LG+G FG        +T + +A K + K+ +  + D++    E  ++    
Sbjct: 16  IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 75
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HP +      ++ K+ ++ VME   GG+L   I +   +    A      I+  ++  H
Sbjct: 76  EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 135
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE----QFCEIVGSPYYMAPEV 255
             G+++RDLK +N L     ++  +K  DFG+      G+     FC   G+P Y+APE+
Sbjct: 136 SKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNXFC---GTPDYIAPEI 189
Query: 256 LR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           L  + Y   +D WS GV++Y +L G  PF  + EE + H+I      + R  W  + KEA
Sbjct: 190 LLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR--W--LEKEA 245
Query: 315 KELVKNMLDPNPYNRLTLE-EVLENPWIKNDN 345
           K+L+  +    P  RL +  ++ ++P  +  N
Sbjct: 246 KDLLVKLFVREPEKRLGVRGDIRQHPLFREIN 277

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 107/230 (46%), Gaps = 19/230 (8%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHLP 139
           +   + LG G FG   +    +TGE  A K+      + E+   +  R   E++IM+ L 
Sbjct: 16  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC-----RQELSPKNRERWCLEIQIMKKL- 69
Query: 140 KHPNIVTYKEAYE------DKDAIYLVMELCEGGEL---FDRIVNKGHYTERAAAAVGKT 190
            HPN+V+ +E  +        D   L ME CEGG+L    ++  N     E     +   
Sbjct: 70  NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD 129
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           I   ++  HEN ++HRDLKPEN +   G +    K ID G +     GE   E VG+  Y
Sbjct: 130 ISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQY 189
Query: 251 MAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK 299
           +APE+L ++ Y   +D WS G + +  + G  PF    +    H  +R K
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREK 239

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 107/230 (46%), Gaps = 19/230 (8%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR---EVEIMRHLP 139
           +   + LG G FG   +    +TGE  A K+      + E+   +  R   E++IM+ L 
Sbjct: 17  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQC-----RQELSPKNRERWCLEIQIMKKL- 70
Query: 140 KHPNIVTYKEAYE------DKDAIYLVMELCEGGEL---FDRIVNKGHYTERAAAAVGKT 190
            HPN+V+ +E  +        D   L ME CEGG+L    ++  N     E     +   
Sbjct: 71  NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD 130
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           I   ++  HEN ++HRDLKPEN +   G +    K ID G +     GE   E VG+  Y
Sbjct: 131 ISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQY 190
Query: 251 MAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK 299
           +APE+L ++ Y   +D WS G + +  + G  PF    +    H  +R K
Sbjct: 191 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREK 240

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score =  100 bits (248), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 136/296 (45%), Gaps = 38/296 (12%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++KY   +++G G +G+ ++  +   GET+A KKI  EK    I    +R E+ I++ L 
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKEL- 57
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
           KH NIV   +    K  + LV E  +    +L D  V +G      A +    +L  +  
Sbjct: 58  KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAY 115
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL 256
           CH+  V+HRDLKP+N L    +   +LK  DFGL+  F  P  ++   + + +Y AP+VL
Sbjct: 116 CHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVL 172
Query: 257 --RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
              + Y   ID+WS G I   ++ G P F   +E      I R         WP V++  
Sbjct: 173 MGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 315 K-------------------------ELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           K                         +L+  ML  +P  R+T ++ LE+ + K +N
Sbjct: 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 99.4 bits (246), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 138/318 (43%), Gaps = 55/318 (17%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           NI   +     LG G +G+        TGE  A KKI  E     +      RE++I++H
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKH 65
Query: 138 LPKHPNIVTY-----KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
             KH NI+T       +++E+ + +Y++ EL +      R+++    ++          L
Sbjct: 66  F-KHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTL 122
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF---------KPGEQ--F 241
           R VKV H + V+HRDLKP N L    + N  LK  DFGL+              G+Q   
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 242 CEIVGSPYYMAPEVLRRN--YGPEIDVWSAGVIIYILLCGVPPFWAE------------- 286
            E V + +Y APEV+  +  Y   +DVWS G I+  L    P F                
Sbjct: 180 VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239
Query: 287 -----------TEEGIAHAIIRGKIDFERDP----WPKVSKEAKELVKNMLDPNPYNRLT 331
                       E   A   I+    +   P    +P+V+ +  +L++ ML  +P  R+T
Sbjct: 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRIT 299
Query: 332 LEEVLENPWIKNDNHAPN 349
            +E LE+P+++   H PN
Sbjct: 300 AKEALEHPYLQT-YHDPN 316

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 99.0 bits (245), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 138/318 (43%), Gaps = 55/318 (17%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           NI   +     LG G +G+        TGE  A KKI  E     +      RE++I++H
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKH 65
Query: 138 LPKHPNIVTY-----KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
             KH NI+T       +++E+ + +Y++ EL +      R+++    ++          L
Sbjct: 66  F-KHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTL 122
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF---------KPGEQ--F 241
           R VKV H + V+HRDLKP N L    + N  LK  DFGL+              G+Q   
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 242 CEIVGSPYYMAPEVLRRN--YGPEIDVWSAGVIIYILLCGVPPFWAE------------- 286
            E V + +Y APEV+  +  Y   +DVWS G I+  L    P F                
Sbjct: 180 TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239
Query: 287 -----------TEEGIAHAIIRGKIDFERDP----WPKVSKEAKELVKNMLDPNPYNRLT 331
                       E   A   I+    +   P    +P+V+ +  +L++ ML  +P  R+T
Sbjct: 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRIT 299
Query: 332 LEEVLENPWIKNDNHAPN 349
            +E LE+P+++   H PN
Sbjct: 300 AKEALEHPYLQT-YHDPN 316

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 99.0 bits (245), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 119/260 (45%), Gaps = 15/260 (5%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           +E+G G FG  +   ++   E  A KK++    ++     D+ +EV  ++ L +HPN + 
Sbjct: 60  REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQ 118
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
           Y+  Y  +   +LVME C G       V+K    E   AAV    L+ +   H + ++HR
Sbjct: 119 YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 178
Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL----RRNYGP 262
           D+K  N L    SE   +K  DFG +    P   F   VG+PY+MAPEV+       Y  
Sbjct: 179 DVKAGNILL---SEPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQYDG 232
Query: 263 EIDVWSAGVIIYILLCGVPP-FWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNM 321
           ++DVWS G+    L    PP F       + H         +   W   S+  +  V + 
Sbjct: 233 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSC 289
Query: 322 LDPNPYNRLTLEEVLENPWI 341
           L   P +R T E +L++ ++
Sbjct: 290 LQKIPQDRPTSEVLLKHRFV 309

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 99.0 bits (245), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 138/318 (43%), Gaps = 55/318 (17%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           NI   +     LG G +G+        TGE  A KKI  E     +      RE++I++H
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKH 65
Query: 138 LPKHPNIVTY-----KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
             KH NI+T       +++E+ + +Y++ EL +      R+++    ++          L
Sbjct: 66  F-KHENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTL 122
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF---------KPGEQ--F 241
           R VKV H + V+HRDLKP N L    + N  LK  DFGL+              G+Q   
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM 179
Query: 242 CEIVGSPYYMAPEVLRRN--YGPEIDVWSAGVIIYILLCGVPPFWAE------------- 286
            E V + +Y APEV+  +  Y   +DVWS G I+  L    P F                
Sbjct: 180 TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239
Query: 287 -----------TEEGIAHAIIRGKIDFERDP----WPKVSKEAKELVKNMLDPNPYNRLT 331
                       E   A   I+    +   P    +P+V+ +  +L++ ML  +P  R+T
Sbjct: 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRIT 299
Query: 332 LEEVLENPWIKNDNHAPN 349
            +E LE+P+++   H PN
Sbjct: 300 AKEALEHPYLQT-YHDPN 316

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 98.6 bits (244), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 131/284 (46%), Gaps = 26/284 (9%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y+  K++G G      Q    E  + YA K +  E+   +  +D  R E+  +  L +H 
Sbjct: 58  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 115
Query: 143 NIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           + +     YE  D  IY+VME C   +L   +  K         +  K +L  V   H++
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR- 257
           G++H DLKP NFL  DG     LK IDFG++   +P          VG+  YM PE ++ 
Sbjct: 175 GIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 258 ----RNYG-------PEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGKIDFERD 305
               R  G       P+ DVWS G I+Y +  G  PF     +    HAII    + E  
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 290
Query: 306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
             P+  K+ ++++K  L  +P  R+++ E+L +P+++   H  N
Sbjct: 291 DIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 332

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 98.6 bits (244), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 131/284 (46%), Gaps = 26/284 (9%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y+  K++G G      Q    E  + YA K +  E+   +  +D  R E+  +  L +H 
Sbjct: 58  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 115
Query: 143 NIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           + +     YE  D  IY+VME C   +L   +  K         +  K +L  V   H++
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR- 257
           G++H DLKP NFL  DG     LK IDFG++   +P          VG+  YM PE ++ 
Sbjct: 175 GIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKD 230
Query: 258 ----RNYG-------PEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGKIDFERD 305
               R  G       P+ DVWS G I+Y +  G  PF     +    HAII    + E  
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 290
Query: 306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
             P+  K+ ++++K  L  +P  R+++ E+L +P+++   H  N
Sbjct: 291 DIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 332

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 131/284 (46%), Gaps = 26/284 (9%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y+  K++G G      Q    E  + YA K +  E+   +  +D  R E+  +  L +H 
Sbjct: 58  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 115
Query: 143 NIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           + +     YE  D  IY+VME C   +L   +  K         +  K +L  V   H++
Sbjct: 116 DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR- 257
           G++H DLKP NFL  DG     LK IDFG++   +P          VG+  YM PE ++ 
Sbjct: 175 GIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 230
Query: 258 ----RNYG-------PEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGKIDFERD 305
               R  G       P+ DVWS G I+Y +  G  PF     +    HAII    + E  
Sbjct: 231 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 290
Query: 306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
             P+  K+ ++++K  L  +P  R+++ E+L +P+++   H  N
Sbjct: 291 DIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 332

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 119/260 (45%), Gaps = 15/260 (5%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           +E+G G FG  +   ++   E  A KK++    ++     D+ +EV  ++ L +HPN + 
Sbjct: 21  REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQ 79
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
           Y+  Y  +   +LVME C G       V+K    E   AAV    L+ +   H + ++HR
Sbjct: 80  YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 139
Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL----RRNYGP 262
           D+K  N L    SE   +K  DFG +    P   F   VG+PY+MAPEV+       Y  
Sbjct: 140 DVKAGNILL---SEPGLVKLGDFGSASIMAPANXF---VGTPYWMAPEVILAMDEGQYDG 193
Query: 263 EIDVWSAGVIIYILLCGVPP-FWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNM 321
           ++DVWS G+    L    PP F       + H         +   W   S+  +  V + 
Sbjct: 194 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSC 250
Query: 322 LDPNPYNRLTLEEVLENPWI 341
           L   P +R T E +L++ ++
Sbjct: 251 LQKIPQDRPTSEVLLKHRFV 270

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 131/284 (46%), Gaps = 26/284 (9%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y+  K++G G      Q    E  + YA K +  E+   +  +D  R E+  +  L +H 
Sbjct: 30  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 87
Query: 143 NIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           + +     YE  D  IY+VME C   +L   +  K         +  K +L  V   H++
Sbjct: 88  DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR- 257
           G++H DLKP NFL  DG     LK IDFG++   +P          VG+  YM PE ++ 
Sbjct: 147 GIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKD 202
Query: 258 ----RNYG-------PEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGKIDFERD 305
               R  G       P+ DVWS G I+Y +  G  PF     +    HAII    + E  
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 262
Query: 306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
             P+  K+ ++++K  L  +P  R+++ E+L +P+++   H  N
Sbjct: 263 DIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 304

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 131/284 (46%), Gaps = 26/284 (9%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y+  K++G G      Q    E  + YA K +  E+   +  +D  R E+  +  L +H 
Sbjct: 11  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 68
Query: 143 NIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           + +     YE  D  IY+VME C   +L   +  K         +  K +L  V   H++
Sbjct: 69  DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 127
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR- 257
           G++H DLKP NFL  DG     LK IDFG++   +P          VG+  YM PE ++ 
Sbjct: 128 GIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 183
Query: 258 ----RNYG-------PEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGKIDFERD 305
               R  G       P+ DVWS G I+Y +  G  PF     +    HAII    + E  
Sbjct: 184 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 243
Query: 306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
             P+  K+ ++++K  L  +P  R+++ E+L +P+++   H  N
Sbjct: 244 DIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 285

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66  QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           ++ +VV+ P +G    +   YT  K +G G FG+ +Q    ++GE  A KK+ ++K    
Sbjct: 36  KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 95
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
                  RE++IMR L  H NIV  +  +    E KD +YL + L    E   R+    H
Sbjct: 96  -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 145
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           Y+ RA   +           + R +   H  G+ HRD+KP+N L     + + LK  DFG
Sbjct: 146 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 202
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
            +     GE     + S YY APE++    +Y   IDVWSAG ++  LL G P F  ++ 
Sbjct: 203 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 261
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            G+   +   K+         +    +E ++ M +PN Y      ++  +PW K
Sbjct: 262 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 303

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 131/284 (46%), Gaps = 26/284 (9%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y+  K++G G      Q    E  + YA K +  E+   +  +D  R E+  +  L +H 
Sbjct: 30  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 87
Query: 143 NIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           + +     YE  D  IY+VME C   +L   +  K         +  K +L  V   H++
Sbjct: 88  DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR- 257
           G++H DLKP NFL  DG     LK IDFG++   +P          VG+  YM PE ++ 
Sbjct: 147 GIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 202
Query: 258 ----RNYG-------PEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGKIDFERD 305
               R  G       P+ DVWS G I+Y +  G  PF     +    HAII    + E  
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 262
Query: 306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
             P+  K+ ++++K  L  +P  R+++ E+L +P+++   H  N
Sbjct: 263 DIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 304

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 122/271 (45%), Gaps = 22/271 (8%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRHL 138
           +Y  G  LG+G FG       +      A K I + ++     + D      EV ++  +
Sbjct: 32  EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 139 PK---HPNIVTYKEAYEDKDAIYLVME-LCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
                HP ++   + +E ++   LV+E      +LFD I  KG   E  +      ++  
Sbjct: 92  GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA 151
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           ++ CH  GV+HRD+K EN L          K IDFG        E + +  G+  Y  PE
Sbjct: 152 IQHCHSRGVVHRDIKDENILI--DLRRGCAKLIDFGSGALLH-DEPYTDFDGTRVYSPPE 208
Query: 255 VLRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK 312
            + R+  +     VWS G+++Y ++CG  PF  + E      I+  ++ F       VS 
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFPA----HVSP 258
Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           +   L++  L P P +R +LEE+L +PW++ 
Sbjct: 259 DCCALIRRCLAPKPSSRPSLEEILLDPWMQT 289

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66  QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           ++ +VV+ P +G    +   YT  K +G G FG+ +Q    ++GE  A KK+ ++K    
Sbjct: 81  KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 140
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
                  RE++IMR L  H NIV  +  +    E KD +YL + L    E   R+    H
Sbjct: 141 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 190
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           Y+ RA   +           + R +   H  G+ HRD+KP+N L     + + LK  DFG
Sbjct: 191 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 247
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
            +     GE     + S YY APE++    +Y   IDVWSAG ++  LL G P F  ++ 
Sbjct: 248 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 306
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            G+   +   K+         +    +E ++ M +PN Y      ++  +PW K
Sbjct: 307 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 348

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66  QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           ++ +VV+ P +G    +   YT  K +G G FG+ +Q    ++GE  A KK+ ++K    
Sbjct: 36  KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 95
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
                  RE++IMR L  H NIV  +  +    E KD +YL + L    E   R+    H
Sbjct: 96  -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 145
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           Y+ RA   +           + R +   H  G+ HRD+KP+N L     + + LK  DFG
Sbjct: 146 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 202
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
            +     GE     + S YY APE++    +Y   IDVWSAG ++  LL G P F  ++ 
Sbjct: 203 SAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 261
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            G+   +   K+         +    +E ++ M +PN Y      ++  +PW K
Sbjct: 262 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 303

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66  QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           ++ +VV+ P +G    +   YT  K +G G FG+ +Q    ++GE  A KK+ ++K    
Sbjct: 30  KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 89
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
                  RE++IMR L  H NIV  +  +    E KD +YL + L    E   R+    H
Sbjct: 90  -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 139
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           Y+ RA   +           + R +   H  G+ HRD+KP+N L     + + LK  DFG
Sbjct: 140 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 196
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
            +     GE     + S YY APE++    +Y   IDVWSAG ++  LL G P F  ++ 
Sbjct: 197 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 255
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            G+   +   K+         +    +E ++ M +PN Y      ++  +PW K
Sbjct: 256 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 297

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66  QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           ++ +VV+ P +G    +   YT  K +G G FG+ +Q    ++GE  A KK+ ++K    
Sbjct: 40  KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 99
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
                  RE++IMR L  H NIV  +  +    E KD +YL + L    E   R+    H
Sbjct: 100 -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 149
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           Y+ RA   +           + R +   H  G+ HRD+KP+N L     + + LK  DFG
Sbjct: 150 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 206
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
            +     GE     + S YY APE++    +Y   IDVWSAG ++  LL G P F  ++ 
Sbjct: 207 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 265
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            G+   +   K+         +    +E ++ M +PN Y      ++  +PW K
Sbjct: 266 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 307

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66  QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           ++ +VV+ P +G    +   YT  K +G G FG+ +Q    ++GE  A KK+ ++K    
Sbjct: 38  KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 97
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
                  RE++IMR L  H NIV  +  +    E KD +YL + L    E   R+    H
Sbjct: 98  -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 147
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           Y+ RA   +           + R +   H  G+ HRD+KP+N L     + + LK  DFG
Sbjct: 148 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 204
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
            +     GE     + S YY APE++    +Y   IDVWSAG ++  LL G P F  ++ 
Sbjct: 205 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 263
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            G+   +   K+         +    +E ++ M +PN Y      ++  +PW K
Sbjct: 264 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 305

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 131/284 (46%), Gaps = 26/284 (9%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y+  K++G G      Q    E  + YA K +  E+   +  +D  R E+  +  L +H 
Sbjct: 14  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 71
Query: 143 NIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           + +     YE  D  IY+VME C   +L   +  K         +  K +L  V   H++
Sbjct: 72  DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 130
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR- 257
           G++H DLKP NFL  DG     LK IDFG++   +P          VG+  YM PE ++ 
Sbjct: 131 GIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 186
Query: 258 ----RNYG-------PEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGKIDFERD 305
               R  G       P+ DVWS G I+Y +  G  PF     +    HAII    + E  
Sbjct: 187 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 246
Query: 306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
             P+  K+ ++++K  L  +P  R+++ E+L +P+++   H  N
Sbjct: 247 DIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 288

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 97.4 bits (241), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 139/304 (45%), Gaps = 43/304 (14%)
Query: 56  SNVDKKSISFQLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACK 112
           S V +     ++ +VV+ P +G    +   YT  K +G G FG+ +Q    ++GE  A K
Sbjct: 4   SKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK 63
Query: 113 KIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGE 168
           K+ ++K           RE++IMR L  H NIV  +  +    E KD +YL + L    E
Sbjct: 64  KVLQDKRFKN-------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE 115
Query: 169 LFDRIVNKGHYTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSE 220
              R+    HY+ RA   +           + R +   H  G+ HRD+KP+N L     +
Sbjct: 116 TVYRVAR--HYS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPD 170
Query: 221 NSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLC 278
            + LK  DFG +     GE     + S YY APE++    +Y   IDVWSAG ++  LL 
Sbjct: 171 TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 230
Query: 279 GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN 338
           G P F  ++  G+   +   K+         +    +E ++ M +PN Y      ++  +
Sbjct: 231 GQPIFPGDS--GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAH 277
Query: 339 PWIK 342
           PW K
Sbjct: 278 PWTK 281

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L  + F   LG+G FG         T E YA K + K+ +  + D++    E  ++    
Sbjct: 19  LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 78
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           K P +      ++  D +Y VME   GG+L   I   G + E  A      I   +    
Sbjct: 79  KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 138
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGL---SIFFKPGEQFCEIVGSPYYMAPEVL 256
             G+++RDLK +N +         +K  DFG+   +I+   G       G+P Y+APE++
Sbjct: 139 SKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIW--DGVTTKXFCGTPDYIAPEII 193
Query: 257 -RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
             + YG  +D W+ GV++Y +L G  PF  E E+ +  +I+   + + +     +SKEA 
Sbjct: 194 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAV 249
Query: 316 ELVKNMLDPNPYNRL 330
            + K ++  +P  RL
Sbjct: 250 AICKGLMTKHPGKRL 264

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 118/255 (46%), Gaps = 13/255 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L  + F   LG+G FG         T E YA K + K+ +  + D++    E  ++    
Sbjct: 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 399
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           K P +      ++  D +Y VME   GG+L   I   G + E  A      I   +    
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 459
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGL---SIFFKPGEQFCEIVGSPYYMAPEVL 256
             G+++RDLK +N +         +K  DFG+   +I+   G       G+P Y+APE++
Sbjct: 460 SKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIW--DGVTTKXFCGTPDYIAPEII 514
Query: 257 -RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
             + YG  +D W+ GV++Y +L G  PF  E E+ +  +I+   + + +     +SKEA 
Sbjct: 515 AYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKEAV 570
Query: 316 ELVKNMLDPNPYNRL 330
            + K ++  +P  RL
Sbjct: 571 AICKGLMTKHPGKRL 585

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66  QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           ++ +VV+ P +G    +   YT  K +G G FG+ +Q    ++GE  A KK+ ++K    
Sbjct: 7   KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 66
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
                  RE++IMR L  H NIV  +  +    E KD +YL + L    E   R+    H
Sbjct: 67  -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 116
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           Y+ RA   +           + R +   H  G+ HRD+KP+N L     + + LK  DFG
Sbjct: 117 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 173
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
            +     GE     + S YY APE++    +Y   IDVWSAG ++  LL G P F  ++ 
Sbjct: 174 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 232
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            G+   +   K+         +    +E ++ M +PN Y      ++  +PW K
Sbjct: 233 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 274

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66  QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           ++ +VV+ P +G    +   YT  K +G G FG+ +Q    ++GE  A KK+ ++K    
Sbjct: 14  KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 73
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
                  RE++IMR L  H NIV  +  +    E KD +YL + L    E   R+    H
Sbjct: 74  -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 123
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           Y+ RA   +           + R +   H  G+ HRD+KP+N L     + + LK  DFG
Sbjct: 124 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 180
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
            +     GE     + S YY APE++    +Y   IDVWSAG ++  LL G P F  ++ 
Sbjct: 181 SAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 239
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            G+   +   K+         +    +E ++ M +PN Y      ++  +PW K
Sbjct: 240 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 281

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 96.7 bits (239), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 131/284 (46%), Gaps = 26/284 (9%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y+  K++G G      Q    E  + YA K +  E+   +  +D  R E+  +  L +H 
Sbjct: 10  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQT-LDSYRNEIAYLNKLQQHS 67
Query: 143 NIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           + +     YE  D  IY+VME C   +L   +  K         +  K +L  V   H++
Sbjct: 68  DKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 126
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR- 257
           G++H DLKP NFL  DG     LK IDFG++   +P          VG+  YM PE ++ 
Sbjct: 127 GIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKD 182
Query: 258 ----RNYG-------PEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGKIDFERD 305
               R  G       P+ DVWS G I+Y +  G  PF     +    HAII    + E  
Sbjct: 183 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP 242
Query: 306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
             P+  K+ ++++K  L  +P  R+++ E+L +P+++   H  N
Sbjct: 243 DIPE--KDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 284

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 96.7 bits (239), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66  QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           ++ +VV+ P +G    +   YT  K +G G FG+ +Q    ++GE  A KK+ ++K    
Sbjct: 21  KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 80
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
                  RE++IMR L  H NIV  +  +    E KD +YL + L    E   R+    H
Sbjct: 81  -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 130
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           Y+ RA   +           + R +   H  G+ HRD+KP+N L     + + LK  DFG
Sbjct: 131 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 187
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
            +     GE     + S YY APE++    +Y   IDVWSAG ++  LL G P F  ++ 
Sbjct: 188 SAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 246
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            G+   +   K+         +    +E ++ M +PN Y      ++  +PW K
Sbjct: 247 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 288

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 96.7 bits (239), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66  QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           ++ +VV+ P +G    +   YT  K +G G FG+ +Q    ++GE  A KK+ ++K    
Sbjct: 10  KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 69
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
                  RE++IMR L  H NIV  +  +    E KD +YL + L    E   R+    H
Sbjct: 70  -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 119
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           Y+ RA   +           + R +   H  G+ HRD+KP+N L     + + LK  DFG
Sbjct: 120 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 176
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
            +     GE     + S YY APE++    +Y   IDVWSAG ++  LL G P F  ++ 
Sbjct: 177 SAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 235
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            G+   +   K+         +    +E ++ M +PN Y      ++  +PW K
Sbjct: 236 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 277

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 96.7 bits (239), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66  QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           ++ +VV+ P +G    +   YT  K +G G FG+ +Q    ++GE  A KK+ ++K    
Sbjct: 15  KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 74
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
                  RE++IMR L  H NIV  +  +    E KD +YL + L    E   R+    H
Sbjct: 75  -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 124
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           Y+ RA   +           + R +   H  G+ HRD+KP+N L     + + LK  DFG
Sbjct: 125 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 181
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
            +     GE     + S YY APE++    +Y   IDVWSAG ++  LL G P F  ++ 
Sbjct: 182 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 240
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            G+   +   K+         +    +E ++ M +PN Y      ++  +PW K
Sbjct: 241 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 282

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 96.3 bits (238), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66  QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           ++ +VV+ P +G    +   YT  K +G G FG+ +Q    ++GE  A KK+ ++K    
Sbjct: 2   KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 61
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
                  RE++IMR L  H NIV  +  +    E KD +YL + L    E   R+    H
Sbjct: 62  -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVAR--H 111
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           Y+ RA   +           + R +   H  G+ HRD+KP+N L     + + LK  DFG
Sbjct: 112 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 168
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
            +     GE     + S YY APE++    +Y   IDVWSAG ++  LL G P F  ++ 
Sbjct: 169 SAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 227
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            G+   +   K+         +    +E ++ M +PN Y      ++  +PW K
Sbjct: 228 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 269

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 95.9 bits (237), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 117/257 (45%), Gaps = 23/257 (8%)
Query: 83  YTFGKELGRGEFG----ITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
           + F K +G+G FG      H+  E+     YA K + K+ +  + +   +  E  ++   
Sbjct: 40  FHFLKVIGKGSFGKVLLARHKAEEV----FYAVKVLQKKAILKKKEEKHIMSERNVLLKN 95
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
            KHP +V    +++  D +Y V++   GGELF  +  +  + E  A      I   +   
Sbjct: 96  VKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYL 155
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI----FFKPGEQFCEIVGSPYYMAPE 254
           H   +++RDLKPEN L         +   DFGL             FC   G+P Y+APE
Sbjct: 156 HSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNSTTSTFC---GTPEYLAPE 209
Query: 255 VLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           VL +  Y   +D W  G ++Y +L G+PPF++     +   I+   +  +    P ++  
Sbjct: 210 VLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNS 265
Query: 314 AKELVKNMLDPNPYNRL 330
           A+ L++ +L  +   RL
Sbjct: 266 ARHLLEGLLQKDRTKRL 282

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 95.9 bits (237), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66  QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           ++ +VV+ P +G    +   YT  K +G G FG+ +Q    ++GE  A KK+ ++K    
Sbjct: 2   KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 61
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
                  RE++IMR L  H NIV  +  +    E KD +YL + L    E   R+    H
Sbjct: 62  -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 111
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           Y+ RA   +           + R +   H  G+ HRD+KP+N L     + + LK  DFG
Sbjct: 112 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 168
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
            +     GE     + S YY APE++    +Y   IDVWSAG ++  LL G P F  ++ 
Sbjct: 169 SAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 227
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            G+   +   K+         +    +E ++ M +PN Y      ++  +PW K
Sbjct: 228 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 269

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 95.9 bits (237), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66  QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           ++ +VV+ P +G    +   YT  K +G G FG+ +Q    ++GE  A KK+ ++K    
Sbjct: 6   KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 65
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
                  RE++IMR L  H NIV  +  +    E KD +YL + L    E   R+    H
Sbjct: 66  -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 115
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           Y+ RA   +           + R +   H  G+ HRD+KP+N L     + + LK  DFG
Sbjct: 116 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 172
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
            +     GE     + S YY APE++    +Y   IDVWSAG ++  LL G P F  ++ 
Sbjct: 173 SAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 231
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            G+   +   K+         +    +E ++ M +PN Y      ++  +PW K
Sbjct: 232 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 273

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 95.9 bits (237), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66  QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           ++ +VV+ P +G    +   YT  K +G G FG+ +Q    ++GE  A KK+ ++K    
Sbjct: 3   KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 62
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
                  RE++IMR L  H NIV  +  +    E KD +YL + L    E   R+    H
Sbjct: 63  -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 112
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           Y+ RA   +           + R +   H  G+ HRD+KP+N L     + + LK  DFG
Sbjct: 113 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 169
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
            +     GE     + S YY APE++    +Y   IDVWSAG ++  LL G P F  ++ 
Sbjct: 170 SAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 228
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            G+   +   K+         +    +E ++ M +PN Y      ++  +PW K
Sbjct: 229 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 270

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 95.9 bits (237), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66  QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           ++ +VV+ P +G    +   YT  K +G G FG+ +Q    ++GE  A KK+ ++K    
Sbjct: 2   KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 61
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
                  RE++IMR L  H NIV  +  +    E KD +YL + L    E   R+    H
Sbjct: 62  -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 111
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           Y+ RA   +           + R +   H  G+ HRD+KP+N L     + + LK  DFG
Sbjct: 112 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 168
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
            +     GE     + S YY APE++    +Y   IDVWSAG ++  LL G P F  ++ 
Sbjct: 169 SAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 227
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            G+   +   K+         +    +E ++ M +PN Y      ++  +PW K
Sbjct: 228 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 269

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 95.9 bits (237), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 43/294 (14%)
Query: 66  QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           ++ +VV+ P +G    +   YT  K +G G FG+ +Q    ++GE  A KK+ ++K    
Sbjct: 2   KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN 61
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
                  RE++IMR L  H NIV  +  +    E KD +YL + L    E   R+    H
Sbjct: 62  -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 111
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           Y+ RA   +           + R +   H  G+ HRD+KP+N L     + + LK  DFG
Sbjct: 112 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 168
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
            +     GE     + S YY APE++    +Y   IDVWSAG ++  LL G P F  ++ 
Sbjct: 169 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 227
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            G+   +   K+         +    +E ++ M +PN Y      ++  +PW K
Sbjct: 228 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 269

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 95.9 bits (237), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           ELG G FG  ++    ET    A K I     K+E +++D   E++I+     HPNIV  
Sbjct: 44  ELGDGAFGKVYKAQNKETSVLAAAKVI---DTKSEEELEDYMVEIDILASC-DHPNIVKL 99
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
            +A+  ++ +++++E C GG +   ++  +   TE     V K  L  +   H+N ++HR
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 207 DLKPENFLFA-DGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR------R 258
           DLK  N LF  DG     +K  DFG+S    +  ++    +G+PY+MAPEV+       R
Sbjct: 160 DLKAGNILFTLDGD----IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y  + DVWS G+ +  +    PP        +   I + +      P  + S   K+ +
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFL 274
Query: 319 KNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
           K  L+ N   R T  ++L++P++  D++ P
Sbjct: 275 KKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 95.5 bits (236), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 141/349 (40%), Gaps = 82/349 (23%)
Query: 75  AEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI 134
            + ++L KY   K+LG+G +GI  +  +  TGE  A KKI  +  +   D     RE+ I
Sbjct: 3   VDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIF-DAFQNSTDAQRTFREIMI 61
Query: 135 MRHLPKHPNIVTY---KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
           +  L  H NIV       A  D+D +YLV +  E       ++            V   +
Sbjct: 62  LTELSGHENIVNLLNVLRADNDRD-VYLVFDYMETD--LHAVIRANILEPVHKQYVVYQL 118
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF---------------K 236
           ++++K  H  G++HRD+KP N L    +    +K  DFGLS  F               +
Sbjct: 119 IKVIKYLHSGGLLHRDMKPSNILL---NAECHVKVADFGLSRSFVNIRRVTNNIPLSINE 175
Query: 237 PGEQF-------CEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAET 287
             E F        + V + +Y APE+L     Y   ID+WS G I+  +LCG P F   +
Sbjct: 176 NTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235
Query: 288 EEGIAHAIIRGKIDF-------------------------------ERD----------- 305
                  II G IDF                               +RD           
Sbjct: 236 TMNQLERII-GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLK 294
Query: 306 --PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK---NDNHAPN 349
             P    ++EA +L+  +L  NP  R++  + L++P++    N N  PN
Sbjct: 295 INPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEPN 343

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 95.5 bits (236), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 138/298 (46%), Gaps = 43/298 (14%)
Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
           +++KY   +++G G +G+ ++  +   G   A K+I  +     I    +R E+ +++ L
Sbjct: 19  LMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIR-EISLLKEL 76
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVK 196
             HPNIV+  +    +  + LV E  E    ++ D   NK    +         +LR V 
Sbjct: 77  -HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIYLYQLLRGVA 133
Query: 197 VCHENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPE 254
            CH++ ++HRDLKP+N L  +DG+    LK  DFGL+  F  P   +   V + +Y AP+
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGA----LKLADFGLARAFGIPVRSYTHEVVTLWYRAPD 189
Query: 255 VL--RRNYGPEIDVWSAGVIIYILLCGVPPF-----------------------WAETEE 289
           VL   + Y   +D+WS G I   ++ G P F                       W + +E
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQE 249
Query: 290 GIAHAIIRGKIDFERDPW----PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
            +     R    FE+ PW    P   +E  +L+ NML  +P  R++  + + +P+ K+
Sbjct: 250 -LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 95.5 bits (236), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           ELG G FG  ++    ET    A K I     K+E +++D   E++I+     HPNIV  
Sbjct: 44  ELGDGAFGKVYKAQNKETSVLAAAKVI---DTKSEEELEDYMVEIDILASC-DHPNIVKL 99
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
            +A+  ++ +++++E C GG +   ++  +   TE     V K  L  +   H+N ++HR
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 207 DLKPENFLFA-DGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR------R 258
           DLK  N LF  DG     +K  DFG+S    +  ++    +G+PY+MAPEV+       R
Sbjct: 160 DLKAGNILFTLDGD----IKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y  + DVWS G+ +  +    PP        +   I + +      P  + S   K+ +
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFL 274
Query: 319 KNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
           K  L+ N   R T  ++L++P++  D++ P
Sbjct: 275 KKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 95.5 bits (236), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 138/298 (46%), Gaps = 43/298 (14%)
Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
           +++KY   +++G G +G+ ++  +   G   A K+I  +     I    +R E+ +++ L
Sbjct: 19  LMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIR-EISLLKEL 76
Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVK 196
             HPNIV+  +    +  + LV E  E    ++ D   NK    +         +LR V 
Sbjct: 77  -HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIYLYQLLRGVA 133
Query: 197 VCHENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPE 254
            CH++ ++HRDLKP+N L  +DG+    LK  DFGL+  F  P   +   V + +Y AP+
Sbjct: 134 HCHQHRILHRDLKPQNLLINSDGA----LKLADFGLARAFGIPVRSYTHEVVTLWYRAPD 189
Query: 255 VL--RRNYGPEIDVWSAGVIIYILLCGVPPF-----------------------WAETEE 289
           VL   + Y   +D+WS G I   ++ G P F                       W + +E
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQE 249
Query: 290 GIAHAIIRGKIDFERDPW----PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
            +     R    FE+ PW    P   +E  +L+ NML  +P  R++  + + +P+ K+
Sbjct: 250 -LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 95.5 bits (236), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 132/270 (48%), Gaps = 18/270 (6%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           ELG G FG  ++    ET    A K I     K+E +++D   E++I+     HPNIV  
Sbjct: 44  ELGDGAFGKVYKAQNKETSVLAAAKVI---DTKSEEELEDYMVEIDILASC-DHPNIVKL 99
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHR 206
            +A+  ++ +++++E C GG +   ++  +   TE     V K  L  +   H+N ++HR
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 207 DLKPENFLFA-DGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYMAPEVLR------R 258
           DLK  N LF  DG     +K  DFG+S    +  ++    +G+PY+MAPEV+       R
Sbjct: 160 DLKAGNILFTLDGD----IKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDR 215
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y  + DVWS G+ +  +    PP        +   I + +      P  + S   K+ +
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFL 274
Query: 319 KNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
           K  L+ N   R T  ++L++P++  D++ P
Sbjct: 275 KKCLEKNVDARWTTSQLLQHPFVTVDSNKP 304

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 95.1 bits (235), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 144/310 (46%), Gaps = 25/310 (8%)
Query: 50  SVSKHASNVDKKSISF----QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIET 105
           SV+  A  +D  SI F    Q + +   P   N   +Y   + LG+G FG    C    T
Sbjct: 154 SVAPFADYLD--SIYFNRFLQWKWLERQPVTKNTFRQY---RVLGKGGFGEVCACQVRAT 208
Query: 106 GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCE 165
           G+ YACKK+ K+++K          E +I+  +     +V+   AYE KDA+ LV+ L  
Sbjct: 209 GKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR-FVVSLAYAYETKDALCLVLTLMN 267
Query: 166 GGELFDRIVNKGH--YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQ 223
           GG+L   I + G   + E  A      I   ++  H   +++RDLKPEN L  D   +  
Sbjct: 268 GGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDD---HGH 324
Query: 224 LKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL---RRNYGPEIDVWSAGVIIYILLCGV 280
           ++  D GL++    G+     VG+  YMAPEV+   R  + P  D W+ G ++Y ++ G 
Sbjct: 325 IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSP--DWWALGCLLYEMIAGQ 382
Query: 281 PPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRL-----TLEEV 335
            PF    ++     + R   +   +   + S +A+ L   +L  +P  RL     +  EV
Sbjct: 383 SPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREV 442
Query: 336 LENPWIKNDN 345
            E+P  K  N
Sbjct: 443 KEHPLFKKLN 452

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 95.1 bits (235), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 135/294 (45%), Gaps = 43/294 (14%)
Query: 66  QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           ++ +VV+ P +G    +   YT  K +G G FG+ +Q    ++GE  A KK+ + K    
Sbjct: 2   KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN 61
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
                  RE++IMR L  H NIV  +  +    E KD +YL + L    E   R+    H
Sbjct: 62  -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 111
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           Y+ RA   +           + R +   H  G+ HRD+KP+N L     + + LK  DFG
Sbjct: 112 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 168
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
            +     GE     + S YY APE++    +Y   IDVWSAG ++  LL G P F  ++ 
Sbjct: 169 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 227
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            G+   +   K+         +    +E ++ M +PN Y      ++  +PW K
Sbjct: 228 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFAFPQIKAHPWTK 269

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 144/310 (46%), Gaps = 25/310 (8%)
Query: 50  SVSKHASNVDKKSISF----QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIET 105
           SV+  A  +D  SI F    Q + +   P   N   +Y   + LG+G FG    C    T
Sbjct: 154 SVAPFADYLD--SIYFNRFLQWKWLERQPVTKNTFRQY---RVLGKGGFGEVCACQVRAT 208
Query: 106 GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCE 165
           G+ YACKK+ K+++K          E +I+  +     +V+   AYE KDA+ LV+ L  
Sbjct: 209 GKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR-FVVSLAYAYETKDALCLVLTLMN 267
Query: 166 GGELFDRIVNKGH--YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQ 223
           GG+L   I + G   + E  A      I   ++  H   +++RDLKPEN L  D   +  
Sbjct: 268 GGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDD---HGH 324
Query: 224 LKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL---RRNYGPEIDVWSAGVIIYILLCGV 280
           ++  D GL++    G+     VG+  YMAPEV+   R  + P  D W+ G ++Y ++ G 
Sbjct: 325 IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSP--DWWALGCLLYEMIAGQ 382
Query: 281 PPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRL-----TLEEV 335
            PF    ++     + R   +   +   + S +A+ L   +L  +P  RL     +  EV
Sbjct: 383 SPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREV 442
Query: 336 LENPWIKNDN 345
            E+P  K  N
Sbjct: 443 KEHPLFKKLN 452

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 135/294 (45%), Gaps = 43/294 (14%)
Query: 66  QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           ++ +VV+ P +G    +   YT  K +G G FG+ +Q    ++GE  A KK+ + K    
Sbjct: 2   KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN 61
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
                  RE++IMR L  H NIV  +  +    E KD +YL + L    E   R+    H
Sbjct: 62  -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVAR--H 111
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           Y+ RA   +           + R +   H  G+ HRD+KP+N L     + + LK  DFG
Sbjct: 112 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 168
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
            +     GE     + S YY APE++    +Y   IDVWSAG ++  LL G P F  ++ 
Sbjct: 169 SAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 227
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            G+   +   K+         +    +E ++ M +PN Y      ++  +PW K
Sbjct: 228 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFKFPQIKAHPWTK 269

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 137/311 (44%), Gaps = 35/311 (11%)
Query: 69  SVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDV 128
           SV + P+  +I D+Y    +LG G +G  ++  +  T ET A K+I  E  +  +    +
Sbjct: 23  SVSAAPSATSI-DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAI 81
Query: 129 RREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVG 188
           R EV +++ L +H NI+  K        ++L+ E  E  +L   +      + R   +  
Sbjct: 82  R-EVSLLKEL-QHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFL 138
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLF--ADGSENSQLKAIDFGLSIFFK-PGEQFCEIV 245
             ++  V  CH    +HRDLKP+N L   +D SE   LK  DFGL+  F  P  QF   +
Sbjct: 139 YQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEI 198
Query: 246 GSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE 303
            + +Y  PE+L   R+Y   +D+WS   I   +L   P F  ++E      I       +
Sbjct: 199 ITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPD 258
Query: 304 RDPWPKVS--------------KEAKELV------------KNMLDPNPYNRLTLEEVLE 337
              WP V+              K  K ++              ML+ +P  R++ +  LE
Sbjct: 259 DTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318
Query: 338 NPWIKNDNHAP 348
           +P+  +++  P
Sbjct: 319 HPYFSHNDFDP 329

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 134/294 (45%), Gaps = 43/294 (14%)
Query: 66  QLRSVVSNPAEGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           ++ +VV+ P +G    +   YT  K +G G FG+ +Q    ++GE  A KK+ + K    
Sbjct: 2   KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN 61
Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGH 178
                  RE++IMR L  H NIV  +  +    E KD +YL + L        R+    H
Sbjct: 62  -------RELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVAR--H 111
Query: 179 YTERAAAAVG--------KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
           Y+ RA   +           + R +   H  G+ HRD+KP+N L     + + LK  DFG
Sbjct: 112 YS-RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFG 168
Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
            +     GE     + S YY APE++    +Y   IDVWSAG ++  LL G P F  ++ 
Sbjct: 169 SAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS- 227
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            G+   +   K+         +    +E ++ M +PN Y      ++  +PW K
Sbjct: 228 -GVDQLVEIIKV---------LGTPTREQIREM-NPN-YTEFAFPQIKAHPWTK 269

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 92.8 bits (229), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 29/285 (10%)
Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDID-----DVRREVE 133
           ++ KY  G  LG G +G   +  + ET     C++  K   K ++        +V++E++
Sbjct: 3   LIGKYLMGDLLGEGSYGKVKEVLDSET----LCRRAVKILKKKKLRRIPNGEANVKKEIQ 58
Query: 134 IMRHLPKHPNIVTYKEAY--EDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGK 189
           ++R L +H N++   +    E+K  +Y+VME C  G  E+ D +  K  +    A     
Sbjct: 59  LLRRL-RHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK-RFPVCQAHGYFC 116
Query: 190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP--GEQFCEIV-G 246
            ++  ++  H  G++H+D+KP N L   G     LK    G++    P   +  C    G
Sbjct: 117 QLIDGLEYLHSQGIVHKDIKPGNLLLTTGG---TLKISALGVAEALHPFAADDTCRTSQG 173
Query: 247 SPYYMAPEV---LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE 303
           SP +  PE+   L    G ++D+WSAGV +Y +  G+ PF  +    +   I +G     
Sbjct: 174 SPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP 233
Query: 304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
            D  P +S    +L+K ML+  P  R ++ ++ ++ W +   H P
Sbjct: 234 GDCGPPLS----DLLKGMLEYEPAKRFSIRQIRQHSWFRK-KHPP 273

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 139/305 (45%), Gaps = 41/305 (13%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAK---EKLKTEIDIDDVRREVEIMR 136
           ++KY     +G G +G+  +C   +TG   A KK  +   +K+  +I +    RE+++++
Sbjct: 24  MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAM----REIKLLK 79
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
            L +H N+V   E  + K   YLV E  +   L D  +       +        I+  + 
Sbjct: 80  QL-RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIG 138
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEV 255
            CH + ++HRD+KPEN L    S++  +K  DFG +     PGE + + V + +Y APE+
Sbjct: 139 FCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPEL 195
Query: 256 LRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETE--------EGIAHAIIRGKIDFERD 305
           L  +  YG  +DVW+ G ++  +  G P F  +++          + + I R +  F ++
Sbjct: 196 LVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN 255
Query: 306 P-------------------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH 346
           P                   +PK+S+   +L K  L  +P  R    E+L + + + D  
Sbjct: 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGF 315
Query: 347 APNVS 351
           A   S
Sbjct: 316 AERFS 320

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 130/311 (41%), Gaps = 54/311 (17%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR-REVEIMRHLPKHPNIV 145
           ++LG G +   ++     TG   A K++   KL +E        RE+ +M+ L KH NIV
Sbjct: 11  EKLGNGTYATVYKGLNKTTGVYVALKEV---KLDSEEGTPSTAIREISLMKEL-KHENIV 66
Query: 146 TYKEAYEDKDAIYLVMELCEGG---ELFDRIVNKGHYTERA-----AAAVGKTILRIVKV 197
              +    ++ + LV E  +      +  R V     T R             +L+ +  
Sbjct: 67  RLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGN---TPRGLELNLVKYFQWQLLQGLAF 123
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEVL 256
           CHEN ++HRDLKP+N L    ++  QLK  DFGL+  F  P   F   V + +Y AP+VL
Sbjct: 124 CHENKILHRDLKPQNLLI---NKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVL 180
Query: 257 --RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
              R Y   ID+WS G I+  ++ G P F    +E     I           WP V+K  
Sbjct: 181 MGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLP 240
Query: 315 K------------------------------ELVKNMLDPNPYNRLTLEEVLENPWIKND 344
           K                              + +  +L  NP  RL+ ++ L +PW    
Sbjct: 241 KYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEY 300
Query: 345 NHAPNVSLGGN 355
            H  + S+GG+
Sbjct: 301 YH--HASMGGS 309

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 124/286 (43%), Gaps = 25/286 (8%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           ++ D+Y  G+ LG G     H   ++      A K +  +  +        RRE +    
Sbjct: 9   HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 138 LPKHPNIVTYKEAYEDKDAI----YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILR 193
           L  HP IV   +  E +       Y+VME  +G  L D +  +G  T + A  V     +
Sbjct: 69  L-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG----EQFCEIVGSPY 249
            +   H+NG++HRD+KP N +    S  + +K +DFG++           Q   ++G+  
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 250 YMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP 308
           Y++PE  R +      DV+S G ++Y +L G PPF  ++ + +A+  +R       DP P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVR------EDPIP 238
Query: 309 K------VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
                  +S +   +V   L  NP NR      +    ++  N  P
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEP 284

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 91.3 bits (225), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 123/286 (43%), Gaps = 25/286 (8%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           ++ D+Y  G+ LG G     H   ++      A K +  +  +        RRE +    
Sbjct: 9   HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 138 LPKHPNIVTYKEAYEDKDAI----YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILR 193
           L  HP IV   +  E +       Y+VME  +G  L D +  +G  T + A  V     +
Sbjct: 69  L-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG----EQFCEIVGSPY 249
            +   H+NG++HRD+KP N L    S  + +K +DFG++           Q   ++G+  
Sbjct: 128 ALNFSHQNGIIHRDVKPANILI---SATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQ 184
Query: 250 YMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP 308
           Y++PE  R +      DV+S G ++Y +L G PPF  ++   +A+  +R       DP P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIP 238
Query: 309 K------VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
                  +S +   +V   L  NP NR      +    ++  N  P
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEP 284

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 126/298 (42%), Gaps = 55/298 (18%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           YT  K +G G FG+  Q   +E+ E    K +  ++ K         RE++IMR + KHP
Sbjct: 42  YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKN--------RELQIMR-IVKHP 92
Query: 143 NIVTYKEAY----EDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI------- 191
           N+V  K  +    + KD ++L + L    E   R     HY +         I       
Sbjct: 93  NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYR--ASRHYAKLKQTMPMLLIKLYMYQL 150
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           LR +   H  G+ HRD+KP+N L    S    LK IDFG +     GE     + S YY 
Sbjct: 151 LRSLAYIHSIGICHRDIKPQNLLLDPPS--GVLKLIDFGSAKILIAGEPNVSXICSRYYR 208
Query: 252 APEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI--------- 300
           APE++    NY   ID+WS G ++  L+ G P F  E+  GI   +   K+         
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES--GIDQLVEIIKVLGTPSREQI 266
Query: 301 ------------------DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
                              F +   P+   +A +L+  +L+  P  RLT  E L +P+
Sbjct: 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPF 324

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 120/262 (45%), Gaps = 16/262 (6%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           LG+G +GI +   ++      A K+I +   +       +  E+ + +HL KH NIV Y 
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS---QPLHEEIALHKHL-KHKNIVQYL 85
Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVG---KTILRIVKVCHENGVMH 205
            ++ +   I + ME   GG L   + +K    +     +G   K IL  +K  H+N ++H
Sbjct: 86  GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE--IVGSPYYMAPEVL---RRNY 260
           RD+K +N L    + +  LK  DFG S     G   C     G+  YMAPE++    R Y
Sbjct: 146 RDIKGDNVLI--NTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGPRGY 202
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
           G   D+WS G  I  +  G PPF+ E  E  A     G      +    +S EAK  +  
Sbjct: 203 GKAADIWSLGCTIIEMATGKPPFY-ELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILK 261
Query: 321 MLDPNPYNRLTLEEVLENPWIK 342
             +P+P  R    ++L + ++K
Sbjct: 262 CFEPDPDKRACANDLLVDEFLK 283

>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The Presence Of Ca2+ And The Junction Domain (Jd) Length = 188

Iteration: 1
 Score = 90.5 bits (223), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/99 (40%), Positives = 71/99 (71%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           A+ L ++++  +K++F M+DTD +G +TF+ELKDGL  +G ++ + ++K LM+AAD+D +
Sbjct: 1   AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 438 GLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
           G +   EF+  +VHL ++  ++ L  AF +FDK+ SG+I
Sbjct: 61  GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYI 99

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 120/262 (45%), Gaps = 16/262 (6%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           LG+G +GI +   ++      A K+I +   +       +  E+ + +HL KH NIV Y 
Sbjct: 16  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS---QPLHEEIALHKHL-KHKNIVQYL 71
Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVG---KTILRIVKVCHENGVMH 205
            ++ +   I + ME   GG L   + +K    +     +G   K IL  +K  H+N ++H
Sbjct: 72  GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 131
Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE--IVGSPYYMAPEVL---RRNY 260
           RD+K +N L    + +  LK  DFG S     G   C     G+  YMAPE++    R Y
Sbjct: 132 RDIKGDNVLI--NTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGPRGY 188
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
           G   D+WS G  I  +  G PPF+ E  E  A     G      +    +S EAK  +  
Sbjct: 189 GKAADIWSLGCTIIEMATGKPPFY-ELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILK 247
Query: 321 MLDPNPYNRLTLEEVLENPWIK 342
             +P+P  R    ++L + ++K
Sbjct: 248 CFEPDPDKRACANDLLVDEFLK 269

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 127/267 (47%), Gaps = 27/267 (10%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           ++LG G +G  ++    ETG+  A K++       E D+ ++ +E+ IM+     P++V 
Sbjct: 35  EKLGEGSYGSVYKAIHKETGQIVAIKQVP-----VESDLQEIIKEISIMQQC-DSPHVVK 88
Query: 147 YKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
           Y  +Y     +++VME C  G + D  R+ NK   TE   A + ++ L+ ++  H    +
Sbjct: 89  YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT-LTEDEIATILQSTLKGLEYLHFMRKI 147
Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLRR-NYGP 262
           HRD+K  N L    +     K  DFG++        +   ++G+P++MAPEV++   Y  
Sbjct: 148 HRDIKAGNILL---NTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNC 204
Query: 263 EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA------KE 316
             D+WS G+    +  G PP+         H  +R       +P P   K         +
Sbjct: 205 VADIWSLGITAIEMAEGKPPY------ADIHP-MRAIFMIPTNPPPTFRKPELWSDNFTD 257
Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKN 343
            VK  L  +P  R T  ++L++P++++
Sbjct: 258 FVKQCLVKSPEQRATATQLLQHPFVRS 284

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 123/286 (43%), Gaps = 25/286 (8%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           ++ D+Y  G+ LG G     H   ++      A K +  +  +        RRE +    
Sbjct: 9   HLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 138 LPKHPNIVTYKEAYEDKDAI----YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILR 193
           L  HP IV   +  E +       Y+VME  +G  L D +  +G  T + A  V     +
Sbjct: 69  L-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG----EQFCEIVGSPY 249
            +   H+NG++HRD+KP N +    S  + +K +DFG++           Q   ++G+  
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 250 YMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP 308
           Y++PE  R +      DV+S G ++Y +L G PPF  ++   +A+  +R       DP P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIP 238
Query: 309 K------VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
                  +S +   +V   L  NP NR      +    ++  N  P
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEP 284

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 123/286 (43%), Gaps = 25/286 (8%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           ++ D+Y  G+ LG G     H   ++      A K +  +  +        RRE +    
Sbjct: 9   HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 138 LPKHPNIVTYKEAYEDKDAI----YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILR 193
           L  HP IV   +  E +       Y+VME  +G  L D +  +G  T + A  V     +
Sbjct: 69  L-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG----EQFCEIVGSPY 249
            +   H+NG++HRD+KP N +    S  + +K +DFG++           Q   ++G+  
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 250 YMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP 308
           Y++PE  R +      DV+S G ++Y +L G PPF  ++   +A+  +R       DP P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIP 238
Query: 309 K------VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
                  +S +   +V   L  NP NR      +    ++  N  P
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEP 284

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 89.4 bits (220), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 118/267 (44%), Gaps = 25/267 (9%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           ++ D+Y  G+ LG G     H   ++      A K +  +  +        RRE +    
Sbjct: 26  HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 85
Query: 138 LPKHPNIVTYKEAYEDKDAI----YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILR 193
           L  HP IV   +  E +       Y+VME  +G  L D +  +G  T + A  V     +
Sbjct: 86  L-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 144
Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG----EQFCEIVGSPY 249
            +   H+NG++HRD+KP N +    S  + +K +DFG++           Q   ++G+  
Sbjct: 145 ALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 201
Query: 250 YMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP 308
           Y++PE  R +      DV+S G ++Y +L G PPF  ++   +A+  +R       DP P
Sbjct: 202 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIP 255
Query: 309 K------VSKEAKELVKNMLDPNPYNR 329
                  +S +   +V   L  NP NR
Sbjct: 256 PSARHEGLSADLDAVVLKALAKNPENR 282

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 89.0 bits (219), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 127/266 (47%), Gaps = 20/266 (7%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           ELG G FG  ++    ETG   A K I   + K+E +++D   E+EI+     HP IV  
Sbjct: 26  ELGDGAFGKVYKAKNKETGALAAAKVI---ETKSEEELEDYIVEIEILATC-DHPYIVKL 81
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRI---VNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
             AY     +++++E C GG + D I   +++G  TE     V + +L  +   H   ++
Sbjct: 82  LGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSKRII 139
Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSIF-FKPGEQFCEIVGSPYYMAPEVLR------ 257
           HRDLK  N L    +    ++  DFG+S    K  ++    +G+PY+MAPEV+       
Sbjct: 140 HRDLKAGNVLM---TLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
             Y  + D+WS G+ +  +    PP        +   I +        P  K S E ++ 
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTP-SKWSVEFRDF 255
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKN 343
           +K  LD NP  R +  ++LE+P++ +
Sbjct: 256 LKIALDKNPETRPSAAQLLEHPFVSS 281

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 89.0 bits (219), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 127/266 (47%), Gaps = 20/266 (7%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           ELG G FG  ++    ETG   A K I   + K+E +++D   E+EI+     HP IV  
Sbjct: 18  ELGDGAFGKVYKAKNKETGALAAAKVI---ETKSEEELEDYIVEIEILATC-DHPYIVKL 73
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRI---VNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
             AY     +++++E C GG + D I   +++G  TE     V + +L  +   H   ++
Sbjct: 74  LGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRG-LTEPQIQVVCRQMLEALNFLHSKRII 131
Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSIF-FKPGEQFCEIVGSPYYMAPEVLR------ 257
           HRDLK  N L    +    ++  DFG+S    K  ++    +G+PY+MAPEV+       
Sbjct: 132 HRDLKAGNVLM---TLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
             Y  + D+WS G+ +  +    PP        +   I +        P  K S E ++ 
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTP-SKWSVEFRDF 247
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKN 343
           +K  LD NP  R +  ++LE+P++ +
Sbjct: 248 LKIALDKNPETRPSAAQLLEHPFVSS 273

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 89.0 bits (219), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 122/286 (42%), Gaps = 25/286 (8%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           ++ D+Y  G+ LG G     H   ++      A K +  +  +        RRE +    
Sbjct: 9   HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 68
Query: 138 LPKHPNIVTYKEAYEDKDAI----YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILR 193
           L  HP IV      E +       Y+VME  +G  L D +  +G  T + A  V     +
Sbjct: 69  L-NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG----EQFCEIVGSPY 249
            +   H+NG++HRD+KP N +    S  + +K +DFG++           Q   ++G+  
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 250 YMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP 308
           Y++PE  R +      DV+S G ++Y +L G PPF  ++   +A+  +R       DP P
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR------EDPIP 238
Query: 309 K------VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
                  +S +   +V   L  NP NR      +    ++  N  P
Sbjct: 239 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEP 284

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 88.6 bits (218), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 138/308 (44%), Gaps = 49/308 (15%)
Query: 72  SNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           S+  E    D Y   ++LGRG++    +   I   E     KI K   K +I     +RE
Sbjct: 28  SHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEK-VVVKILKPVKKNKI-----KRE 81
Query: 132 VEIMRHLPKHPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGK 189
           ++I+ +L   PNI+T  +  +D       LV E     + F ++      T+        
Sbjct: 82  IKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMY 138
Query: 190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
            IL+ +  CH  G+MHRD+KP N +     E+ +L+ ID+GL+ F+ PG+++   V S Y
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY 196
Query: 250 YMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------ 298
           +  PE+L   + Y   +D+WS G ++  ++    PF+      ++ +  A + G      
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 256
Query: 299 ---KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLE 333
              K + E DP             W +         VS EA + +  +L  +  +RLT  
Sbjct: 257 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 316
Query: 334 EVLENPWI 341
           E +E+P+ 
Sbjct: 317 EAMEHPYF 324

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 128/301 (42%), Gaps = 50/301 (16%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD------VRREVE 133
           + KY   +++G G +G   +    ET E  A K++        +D DD        RE+ 
Sbjct: 1   MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV-------RLDDDDEGVPSSALREIC 53
Query: 134 IMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTI 191
           +++ L KH NIV   +       + LV E C+    + FD     G        +    +
Sbjct: 54  LLKEL-KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC--NGDLDPEIVKSFLFQL 110
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYY 250
           L+ +  CH   V+HRDLKP+N L    + N +LK  DFGL+  F  P   +   V + +Y
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLADFGLARAFGIPVRCYSAEVVTLWY 167
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAIIRGKIDFERDPW 307
             P+VL   + Y   ID+WSAG I   L     P +   + +     I R       + W
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQW 227
Query: 308 PKVSK-------------------------EAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           P ++K                           ++L++N+L  NP  R++ EE L++P+  
Sbjct: 228 PSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
Query: 343 N 343
           +
Sbjct: 288 D 288

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 128/301 (42%), Gaps = 50/301 (16%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD------VRREVE 133
           + KY   +++G G +G   +    ET E  A K++        +D DD        RE+ 
Sbjct: 1   MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV-------RLDDDDEGVPSSALREIC 53
Query: 134 IMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTI 191
           +++ L KH NIV   +       + LV E C+    + FD     G        +    +
Sbjct: 54  LLKEL-KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC--NGDLDPEIVKSFLFQL 110
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYY 250
           L+ +  CH   V+HRDLKP+N L    + N +LK  +FGL+  F  P   +   V + +Y
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPVRCYSAEVVTLWY 167
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILL-CGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
             P+VL   + Y   ID+WSAG I   L   G P F     +     I R       + W
Sbjct: 168 RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQW 227
Query: 308 PKVSK-------------------------EAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           P ++K                           ++L++N+L  NP  R++ EE L++P+  
Sbjct: 228 PSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
Query: 343 N 343
           +
Sbjct: 288 D 288

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 14/196 (7%)
Query: 130 REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGK 189
           REV     L  H NIV+  +  E+ D  YLVME  EG  L + I + G  +   A     
Sbjct: 60  REVHNSSQL-SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTN 118
Query: 190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE--QFCEIVGS 247
            IL  +K  H+  ++HRD+KP+N L      N  LK  DFG++         Q   ++G+
Sbjct: 119 QILDGIKHAHDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKALSETSLTQTNHVLGT 175
Query: 248 PYYMAPEVLRRNYGPE-IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP 306
             Y +PE  +     E  D++S G+++Y +L G PPF  ET   IA       I   +D 
Sbjct: 176 VQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA-------IKHIQDS 228
Query: 307 WPKVSKEAKELVKNML 322
            P V+ + ++ +   L
Sbjct: 229 VPNVTTDVRKDIPQSL 244

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 86.7 bits (213), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKSQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+S+LK +DFGL       ++    V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDSELKILDFGLC--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 28  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 85
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 86  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 143
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+S+LK +DFGL+      ++    V + +Y APE
Sbjct: 144 LKYIHSADIIHRDLKPSNLAV---NEDSELKILDFGLA--RHTDDEMTGYVATRWYRAPE 198
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTG 225

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 86.3 bits (212), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 24  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 81
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 82  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 139
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+S+LK +DFGL+      ++    V + +Y APE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAV---NEDSELKILDFGLA--RHTDDEMTGYVATRWYRAPE 194
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTG 221

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 135/332 (40%), Gaps = 78/332 (23%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR---REVEIMR 136
           +D++   +  G+G FG      E  TG + A KK+          I D R   RE++IM+
Sbjct: 22  MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV----------IQDPRFRNRELQIMQ 71
Query: 137 HLP--KHPNIVTYKEAY-----EDKDAIYLVMELCEGGELFDRIVNKGHYTERAAA---- 185
            L    HPNIV  +  +      D+  IYL + +    +   R   + +Y  + A     
Sbjct: 72  DLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCC-RNYYRRQVAPPPIL 130
Query: 186 ----------AVGKTILRIVKVCHENGVMHRDLKPENFLF--ADGSENSQLKAIDFGLSI 233
                     ++G   L  V VCH      RD+KP N L   ADG+    LK  DFG + 
Sbjct: 131 IKVFLFQLIRSIGCLHLPSVNVCH------RDIKPHNVLVNEADGT----LKLCDFGSAK 180
Query: 234 FFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGI 291
              P E     + S YY APE++   ++Y   +D+WS G I   ++ G P F  +   G 
Sbjct: 181 KLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ 240
Query: 292 AHAIIR-----------------GKIDFERD---PWPKV--------SKEAKELVKNMLD 323
            H I+R                   +D       PW  V        +KEA +L+  +L 
Sbjct: 241 LHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQ 300
Query: 324 PNPYNRLTLEEVLENPWIKNDNHAPNVSLGGN 355
             P  R+   E L +P+  ++ H P   L  N
Sbjct: 301 YLPEERMKPYEALCHPYF-DELHDPATKLPNN 331

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 85.9 bits (211), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMAGFVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 85.9 bits (211), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMAGFVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 121/250 (48%), Gaps = 22/250 (8%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K +GRG FG         T   YA K + K ++    +    R E +++ +      I  
Sbjct: 96  KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN-GDCQWITA 154
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRI--VNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
              A++D++ +YLVM+   GG+L   +         + A   +G+ +L I  + H+   +
Sbjct: 155 LHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI-HQLHYV 213
Query: 205 HRDLKPENFLFADGSENSQLKAIDFG--LSIFFKPGEQFCEIVGSPYYMAPEVLRR---- 258
           HRD+KP+N L      N  ++  DFG  L +      Q    VG+P Y++PE+L+     
Sbjct: 214 HRDIKPDNVLL---DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDG 270
Query: 259 --NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK----VSK 312
              YGPE D WS GV +Y +L G  PF+AE+       I+  +   ER  +P     VS+
Sbjct: 271 MGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHE---ERFQFPSHVTDVSE 327
Query: 313 EAKELVKNML 322
           EAK+L++ ++
Sbjct: 328 EAKDLIQRLI 337

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 127/269 (47%), Gaps = 21/269 (7%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLP 139
           + T  + +G G FG  ++ F I  G+  A K  A+     +I   I++VR+E ++   L 
Sbjct: 8   ELTLEEIIGIGGFGKVYRAFWI--GDEVAVKA-ARHDPDEDISQTIENVRQEAKLFAML- 63
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           KHPNI+  +     +  + LVME   GG L +R+++               I R +   H
Sbjct: 64  KHPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYLH 122
Query: 200 ENGV---MHRDLKPENFLFADGSENSQL-----KAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +  +   +HRDLK  N L     EN  L     K  DFGL+  +    +     G+  +M
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-AGAYAWM 181
Query: 252 APEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APEV+R + +    DVWS GV+++ LL G  PF       +A+ +   K+     P P  
Sbjct: 182 APEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLAL---PIPST 238
Query: 311 SKEA-KELVKNMLDPNPYNRLTLEEVLEN 338
             E   +L+++  +P+P++R +   +L+ 
Sbjct: 239 CPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 18  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 75
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 76  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCAKLTDDHVQFLIYQILRG 133
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 188
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTG 215

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDXELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 18  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 75
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 76  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 133
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMAGFVATRWYRAPE 188
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTG 215

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 85.5 bits (210), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 121/250 (48%), Gaps = 22/250 (8%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K +GRG FG         T   YA K + K ++    +    R E +++ +      I  
Sbjct: 80  KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN-GDCQWITA 138
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRI--VNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
              A++D++ +YLVM+   GG+L   +         + A   +G+ +L I  + H+   +
Sbjct: 139 LHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSI-HQLHYV 197
Query: 205 HRDLKPENFLFADGSENSQLKAIDFG--LSIFFKPGEQFCEIVGSPYYMAPEVLRR---- 258
           HRD+KP+N L      N  ++  DFG  L +      Q    VG+P Y++PE+L+     
Sbjct: 198 HRDIKPDNVLL---DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDG 254
Query: 259 --NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK----VSK 312
              YGPE D WS GV +Y +L G  PF+AE+       I+  +   ER  +P     VS+
Sbjct: 255 MGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHE---ERFQFPSHVTDVSE 311
Query: 313 EAKELVKNML 322
           EAK+L++ ++
Sbjct: 312 EAKDLIQRLI 321

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 85.5 bits (210), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 42  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 99
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L   G   + IV     T+     +   ILR 
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 158 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 212
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTG 239

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 85.1 bits (209), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 41  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 98
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L   G   + IV     T+     +   ILR 
Sbjct: 99  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 157 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 211
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTG 238

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 85.1 bits (209), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 32  ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 89
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 90  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 147
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 148 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 202
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 203 IMLNWMHYNQTVDIWSVGCIMAELLTG 229

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 85.1 bits (209), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 29  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 86
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 87  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 144
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTADEMTGYVATRWYRAPE 199
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTG 226

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 85.1 bits (209), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK++K   ++ I      RE+ +++H+ K
Sbjct: 34  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSK-PFQSIIHAKRTYRELRLLKHM-K 91
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L   G   + IV     T+     +   ILR 
Sbjct: 92  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 150 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 204
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTG 231

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 85.1 bits (209), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 28  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 85
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 86  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 143
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 144 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 198
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTG 225

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 85.1 bits (209), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 29  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 86
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 87  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 144
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTADEMTGYVATRWYRAPE 199
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTG 226

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 85.1 bits (209), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 119/262 (45%), Gaps = 30/262 (11%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           + KY    ++G+G FG   +    +TG+  A KK+  E  K    I  +R E++I++ L 
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLL- 74
Query: 140 KHPNIVTYKEAYEDK--------DAIYLVMELCE---GGELFDRIVNKGHYTERAAAAVG 188
           KH N+V   E    K         +IYLV + CE    G L + +V    +T      V 
Sbjct: 75  KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVM 131
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-----QFCE 243
           + +L  +   H N ++HRD+K  N L    + +  LK  DFGL+  F   +     ++  
Sbjct: 132 QMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 244 IVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
            V + +Y  PE+L   R+YGP ID+W AG I+  +    P     TE+     I +    
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS 248
Query: 302 FERDPWPKVSK----EAKELVK 319
              + WP V      E  ELVK
Sbjct: 249 ITPEVWPNVDNYELYEKLELVK 270

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 29  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 86
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 87  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 144
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTADEMTGYVATRWYRAPE 199
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTG 226

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 85.1 bits (209), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 18  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 75
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 76  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 133
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 188
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTG 215

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 27  ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 84
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 85  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 142
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAV---NEDXELKILDFGLA--RHTDDEMTGYVATRWYRAPE 197
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTG 224

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 42  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 99
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L   G   + IV     T+     +   ILR 
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 158 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMXGXVATRWYRAPE 212
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTG 239

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 109/241 (45%), Gaps = 37/241 (15%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL--KTEIDIDDVRREVEIMRHL- 138
           KY+ GK LG G FGI  + F+IE+G+ +A KK+ ++      E+DI  V   V I++ + 
Sbjct: 8   KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVD 67
Query: 139 ---------PKHP------NIVTYKEAYEDKDAIYLVMELCEGGEL---FDRIVNKGHYT 180
                    PK P      N +  K    +     +++   +   L    + + +  H  
Sbjct: 68  YFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKV 127
Query: 181 ERAAAAVGKTI------------LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID 228
            ++    G++I             R V   H  G+ HRD+KP+N L    S+++ LK  D
Sbjct: 128 LKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV--NSKDNTLKLCD 185
Query: 229 FGLSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAE 286
           FG +    P E     + S +Y APE++     Y P ID+WS G +   L+ G P F  E
Sbjct: 186 FGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGE 245
Query: 287 T 287
           T
Sbjct: 246 T 246

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 33  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 90
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L   G   + IV     T+     +   ILR 
Sbjct: 91  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 149 LKYIHSADIIHRDLKPSNLAV---NEDXELKILDFGLA--RHTDDEMTGYVATRWYRAPE 203
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTG 230

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 121/255 (47%), Gaps = 32/255 (12%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           K +GRG FG           + +A K + K ++    +    R E +++ +      I T
Sbjct: 80  KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN-GDSKWITT 138
Query: 147 YKEAYEDKDAIYLVMELCEGGELF-------DRIVNKGHYTERAAAAVGKTILRIVKVCH 199
              A++D + +YLVM+   GG+L        DR+       E A   + + ++ I  V H
Sbjct: 139 LHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPE-----EMARFYLAEMVIAIDSV-H 192
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFG--LSIFFKPGEQFCEIVGSPYYMAPEVLR 257
           +   +HRD+KP+N L      N  ++  DFG  L +      Q    VG+P Y++PE+L+
Sbjct: 193 QLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQ 249
Query: 258 R------NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-- 309
                   YGPE D WS GV +Y +L G  PF+AE+       I+  K   ER  +P   
Sbjct: 250 AMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK---ERFQFPTQV 306
Query: 310 --VSKEAKELVKNML 322
             VS+ AK+L++ ++
Sbjct: 307 TDVSENAKDLIRRLI 321

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 16/274 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++ ++  + +GRG FG  + C + +TG+ YA K + K+++K +   + +     IM  L 
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLV 246
Query: 140 KH---PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                P IV    A+   D +  +++L  GG+L   +   G ++E         I+  ++
Sbjct: 247 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
             H   V++RDLKP N L     E+  ++  D GL+  F   +     VG+  YMAPEVL
Sbjct: 307 HMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVL 362
Query: 257 RRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           ++   Y    D +S G +++ LL G  PF     +   H I R  +    +     S E 
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTLTMAVELPDSFSPEL 421
Query: 315 KELVKNMLDPNPYNRLTL-----EEVLENPWIKN 343
           + L++ +L  +   RL       +EV E+P+ ++
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 27  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 84
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 85  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 142
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAV---NEDXELKILDFGLA--RHTDDEMTGYVATRWYRAPE 197
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTG 224

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 16/274 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++ ++  + +GRG FG  + C + +TG+ YA K + K+++K +   + +     IM  L 
Sbjct: 187 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLV 245
Query: 140 KH---PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                P IV    A+   D +  +++L  GG+L   +   G ++E         I+  ++
Sbjct: 246 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 305
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
             H   V++RDLKP N L     E+  ++  D GL+  F   +     VG+  YMAPEVL
Sbjct: 306 HMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVL 361
Query: 257 RRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           ++   Y    D +S G +++ LL G  PF     +   H I R  +    +     S E 
Sbjct: 362 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTLTMAVELPDSFSPEL 420
Query: 315 KELVKNMLDPNPYNRLTL-----EEVLENPWIKN 343
           + L++ +L  +   RL       +EV E+P+ ++
Sbjct: 421 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 454

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 33  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 90
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 91  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 148
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 149 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 203
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTG 230

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 34  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 91
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 92  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 149
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 150 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 204
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTG 231

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 34  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 91
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 92  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 149
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 150 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 204
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTG 231

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 119/262 (45%), Gaps = 30/262 (11%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           + KY    ++G+G FG   +    +TG+  A KK+  E  K    I  +R E++I++ L 
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLL- 74
Query: 140 KHPNIVTYKEAYEDK--------DAIYLVMELCE---GGELFDRIVNKGHYTERAAAAVG 188
           KH N+V   E    K         +IYLV + CE    G L + +V    +T      V 
Sbjct: 75  KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVM 131
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-----QFCE 243
           + +L  +   H N ++HRD+K  N L    + +  LK  DFGL+  F   +     ++  
Sbjct: 132 QMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 244 IVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
            V + +Y  PE+L   R+YGP ID+W AG I+  +    P     TE+     I +    
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS 248
Query: 302 FERDPWPKVSK----EAKELVK 319
              + WP V      E  ELVK
Sbjct: 249 ITPEVWPNVDNYELYEKLELVK 270

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 24  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 81
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 82  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 139
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 194
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTG 221

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 193 IMLNAMHYNQTVDIWSVGCIMAELLTG 219

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 119/262 (45%), Gaps = 30/262 (11%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           + KY    ++G+G FG   +    +TG+  A KK+  E  K    I  +R E++I++ L 
Sbjct: 16  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLL- 73
Query: 140 KHPNIVTYKEAYEDK--------DAIYLVMELCE---GGELFDRIVNKGHYTERAAAAVG 188
           KH N+V   E    K         +IYLV + CE    G L + +V    +T      V 
Sbjct: 74  KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVM 130
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-----QFCE 243
           + +L  +   H N ++HRD+K  N L    + +  LK  DFGL+  F   +     ++  
Sbjct: 131 QMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYXN 187
Query: 244 IVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
            V + +Y  PE+L   R+YGP ID+W AG I+  +    P     TE+     I +    
Sbjct: 188 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS 247
Query: 302 FERDPWPKVSK----EAKELVK 319
              + WP V      E  ELVK
Sbjct: 248 ITPEVWPNVDNYELYEKLELVK 269

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 27  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 84
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 85  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 142
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 197
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTG 224

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 29  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 86
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 87  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 144
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 199
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTG 226

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 27  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 84
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 85  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 142
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 197
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTG 224

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 21  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 78
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 79  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 136
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 137 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 191
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 192 IMLNWMHYNQTVDIWSVGCIMAELLTG 218

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGXVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 101/201 (50%), Gaps = 17/201 (8%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV- 145
           + +G G +G     ++    +  A KK+++   ++ I      RE+ +++HL KH N++ 
Sbjct: 34  RPVGSGAYGSVCSAYDARLRQKVAVKKLSR-PFQSLIHARRTYRELRLLKHL-KHENVIG 91
Query: 146 -----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
                T   + ED   +YLV  L   G   + IV     ++     +   +LR +K  H 
Sbjct: 92  LLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-- 258
            G++HRDLKP N      +E+S+L+ +DFGL+   +  E+    V + +Y APE++    
Sbjct: 150 AGIIHRDLKPSNVAV---NEDSELRILDFGLA--RQADEEMTGYVATRWYRAPEIMLNWM 204
Query: 259 NYGPEIDVWSAGVIIYILLCG 279
           +Y   +D+WS G I+  LL G
Sbjct: 205 HYNQTVDIWSVGCIMAELLQG 225

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 119/262 (45%), Gaps = 30/262 (11%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           + KY    ++G+G FG   +    +TG+  A KK+  E  K    I  +R E++I++ L 
Sbjct: 17  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLL- 74
Query: 140 KHPNIVTYKEAYEDKDA--------IYLVMELCE---GGELFDRIVNKGHYTERAAAAVG 188
           KH N+V   E    K +        IYLV + CE    G L + +V    +T      V 
Sbjct: 75  KHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVM 131
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-----QFCE 243
           + +L  +   H N ++HRD+K  N L    + +  LK  DFGL+  F   +     ++  
Sbjct: 132 QMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYXN 188
Query: 244 IVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
            V + +Y  PE+L   R+YGP ID+W AG I+  +    P     TE+     I +    
Sbjct: 189 RVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS 248
Query: 302 FERDPWPKVSK----EAKELVK 319
              + WP V      E  ELVK
Sbjct: 249 ITPEVWPNVDNYELYEKLELVK 270

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 24  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 81
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 82  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 139
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 194
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTG 221

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 24  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 81
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 82  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 139
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 194
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTG 221

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 28  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 85
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 86  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 143
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 144 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 198
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTG 225

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 41  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 98
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L   G   + IV     T+     +   ILR 
Sbjct: 99  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 157 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 211
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTG 238

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 45  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 102
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L   G   + IV     T+     +   ILR 
Sbjct: 103 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 161 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 215
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTG 242

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 103/207 (49%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 42  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 99
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L   G   + IV     T+     +   ILR 
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 158 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 212
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTG 239

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 133/302 (44%), Gaps = 44/302 (14%)
Query: 77  GNILDKYTFGK--ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREV 132
           G ++D   F K  ++G G +G+ ++     TGE  A KKI   +L TE +       RE+
Sbjct: 1   GPLVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREI 57
Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
            +++ L  HPNIV   +    ++ +YLV E     +   + ++    T      +   + 
Sbjct: 58  SLLKEL-NHPNIVKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLF 114
Query: 193 RIVK---VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSP 248
           ++++    CH + V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + 
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTL 171
Query: 249 YYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP 306
           +Y APE+L   + Y   +D+WS G I   ++     F  ++E      I R     +   
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 231
Query: 307 WPKVS-------------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           WP V+                         ++ + L+  ML  +P  R++ +  L +P+ 
Sbjct: 232 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
Query: 342 KN 343
           ++
Sbjct: 292 QD 293

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 16/274 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++ ++  + +GRG FG  + C + +TG+ YA K + K+++K +   + +     IM  L 
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLV 246
Query: 140 KH---PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                P IV    A+   D +  +++L  GG+L   +   G ++E         I+  ++
Sbjct: 247 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
             H   V++RDLKP N L     E+  ++  D GL+  F   +     VG+  YMAPEVL
Sbjct: 307 HMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVL 362
Query: 257 RRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           ++   Y    D +S G +++ LL G  PF     +   H I R  +    +     S E 
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTLTMAVELPDSFSPEL 421
Query: 315 KELVKNMLDPNPYNRLTL-----EEVLENPWIKN 343
           + L++ +L  +   RL       +EV E+P+ ++
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 129/274 (47%), Gaps = 16/274 (5%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++ ++  + +GRG FG  + C + +TG+ YA K + K+++K +   + +     IM  L 
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK-QGETLALNERIMLSLV 246
Query: 140 KH---PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
                P IV    A+   D +  +++L  GG+L   +   G ++E         I+  ++
Sbjct: 247 STGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
             H   V++RDLKP N L     E+  ++  D GL+  F   +     VG+  YMAPEVL
Sbjct: 307 HMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVL 362
Query: 257 RRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           ++   Y    D +S G +++ LL G  PF     +   H I R  +    +     S E 
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-KHEIDRMTLTMAVELPDSFSPEL 421
Query: 315 KELVKNMLDPNPYNRLTL-----EEVLENPWIKN 343
           + L++ +L  +   RL       +EV E+P+ ++
Sbjct: 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 20  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 77
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 78  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 135
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 136 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 190
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLTG 217

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 28  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 85
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 86  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 143
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 144 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 198
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTG 225

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 45  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 102
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 103 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 160
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 161 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMXGYVATRWYRAPE 215
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTG 242

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 19  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 76
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 77  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 134
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 135 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 189
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTG 216

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 18  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 75
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 76  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 133
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 188
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTG 215

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD-----VRREVEIMRHLPKHPN 143
           LG G+F   ++  +  T +  A KKI   KL    +  D       RE+++++ L  HPN
Sbjct: 18  LGEGQFATVYKARDKNTNQIVAIKKI---KLGHRSEAKDGINRTALREIKLLQEL-SHPN 73
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIV--NKGHYTERAAAAVGKTILRIVKVCHEN 201
           I+   +A+  K  I LV +  E     + I+  N    T     A     L+ ++  H++
Sbjct: 74  IIGLLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH 131
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVL--RR 258
            ++HRDLKP N L     EN  LK  DFGL+  F  P   +   V + +Y APE+L   R
Sbjct: 132 WILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGAR 188
Query: 259 NYGPEIDVWSAGVIIYILLCGVP 281
            YG  +D+W+ G I+  LL  VP
Sbjct: 189 MYGVGVDMWAVGCILAELLLRVP 211

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 19  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 76
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 77  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 134
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y APE
Sbjct: 135 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRAPE 189
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTG 216

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 131/309 (42%), Gaps = 49/309 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 34  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 91
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +YLV  L  G +L+ +++   H +      
Sbjct: 92  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYLVTHLM-GADLY-KLLKTQHLSNDHICY 148
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLARVADPDHDHTGFLT 205
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F  +   + + H + I G
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 265
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
               E                     + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 266 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 325
Query: 334 EVLENPWIK 342
           + L +P+++
Sbjct: 326 QALAHPYLE 334

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 10  EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 65
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E     +   + ++    T      +   + ++++    CH +
Sbjct: 66  VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKPEN L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 124 RVLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 129/295 (43%), Gaps = 48/295 (16%)
Query: 77  GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMR 136
           G  L  +   + LGRG FG+  +         YA K+I       E+  + V REV+ + 
Sbjct: 1   GRYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALA 58
Query: 137 HLPKHPNIVTYKEAYEDKDA------------IYLVMELCEGGELFDRIVNKGHYTERAA 184
            L +HP IV Y  A+ +K+             +Y+ M+LC    L D +  +    ER  
Sbjct: 59  KL-EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERER 117
Query: 185 AAVGKTILRI---VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF 241
           +      L+I   V+  H  G+MHRDLKP N  F   + +  +K  DFGL       E+ 
Sbjct: 118 SVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDVVKVGDFGLVTAMDQDEEE 174
Query: 242 CEI-------------VGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAET 287
             +             VG+  YM+PE +  N Y  ++D++S G+I++ LL    PF  + 
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM 231
Query: 288 EEGIAHAIIRGKIDFERDPWPKVSKEAKE----LVKNMLDPNPYNRLTLEEVLEN 338
           E       +R   D     +P +  +       +V++ML P+P  R     ++EN
Sbjct: 232 ER------VRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 132/308 (42%), Gaps = 49/308 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 16  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 73
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 74  IKILLAF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 130
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +  S LK  DFGL+    P         
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTSDLKICDFGLARVADPDHDHTGFLT 187
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPF----------------W 284
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F                 
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 247
Query: 285 AETEEGIAHAIIRGKIDF-------ERDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
           + ++E +   I     ++        + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 248 SPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 307
Query: 334 EVLENPWI 341
           + L +P++
Sbjct: 308 QALAHPYL 315

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 11  EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 66
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E     +   + ++    T      +   + ++++    CH +
Sbjct: 67  VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKPEN L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 125 RVLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 10  EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 65
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E         + ++    T      +   + ++++    CH +
Sbjct: 66  VKLLDVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKPEN L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 124 RVLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 16  EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 71
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E     +   + ++    T      +   + ++++    CH +
Sbjct: 72  VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVL--RR 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 130 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 186
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 246
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 247 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +D+GL+      ++    V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDYGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 64
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E         + ++    T      +   + ++++    CH +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVL--RR 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 123 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 179
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 64
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E         + ++    T      +   + ++++    CH +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 123 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 12  EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 67
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E         + ++    T      +   + ++++    CH +
Sbjct: 68  VKLLDVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKPEN L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 126 RVLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 64
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E         + ++    T      +   + ++++    CH +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 123 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 63
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E         + ++    T      +   + ++++    CH +
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 122 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 101/201 (50%), Gaps = 17/201 (8%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV- 145
           + +G G +G     ++    +  A KK+++   ++ I      RE+ +++HL KH N++ 
Sbjct: 34  RPVGSGAYGSVCSAYDARLRQKVAVKKLSR-PFQSLIHARRTYRELRLLKHL-KHENVIG 91
Query: 146 -----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
                T   + ED   +YLV  L   G   + IV     ++     +   +LR +K  H 
Sbjct: 92  LLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-- 258
            G++HRDLKP N      +E+S+L+ +DFGL+   +  E+    V + +Y APE++    
Sbjct: 150 AGIIHRDLKPSNVAV---NEDSELRILDFGLA--RQADEEMTGYVATRWYRAPEIMLNWM 204
Query: 259 NYGPEIDVWSAGVIIYILLCG 279
           +Y   +D+WS G I+  LL G
Sbjct: 205 HYNQTVDIWSVGCIMAELLQG 225

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 64
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E     +   + ++    T      +   + ++++    CH +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 123 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 10  EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 65
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E     +   + ++    T      +   + ++++    CH +
Sbjct: 66  VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 124 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 180
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 12/253 (4%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           LGRG FG    C    TG+ YACKK+ K++LK          E +I+  +     IV+  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGH----YTERAAAAVGKTILRIVKVCHENGVM 204
            A+E K  + LVM +  GG++   I N       + E  A      I+  ++  H+  ++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYYMAPEVLR-RNYGP 262
           +RDLKPEN L  D   +  ++  D GL++  K G+   +   G+P +MAPE+L    Y  
Sbjct: 312 YRDLKPENVLLDD---DGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 263 EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP-KVSKEAKELVKNM 321
            +D ++ GV +Y ++    PF A  E+ + +  ++ ++  +   +P K S  +K+  + +
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 322 LDPNPYNRLTLEE 334
           L  +P  RL   +
Sbjct: 428 LQKDPEKRLGFRD 440

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 63
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E         + ++    T      +   + ++++    CH +
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 122 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 64
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E     +   + ++    T      +   + ++++    CH +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 123 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 12/253 (4%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           LGRG FG    C    TG+ YACKK+ K++LK          E +I+  +     IV+  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGH----YTERAAAAVGKTILRIVKVCHENGVM 204
            A+E K  + LVM +  GG++   I N       + E  A      I+  ++  H+  ++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYYMAPEVLR-RNYGP 262
           +RDLKPEN L  D   +  ++  D GL++  K G+   +   G+P +MAPE+L    Y  
Sbjct: 312 YRDLKPENVLLDD---DGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 263 EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP-KVSKEAKELVKNM 321
            +D ++ GV +Y ++    PF A  E+ + +  ++ ++  +   +P K S  +K+  + +
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 322 LDPNPYNRLTLEE 334
           L  +P  RL   +
Sbjct: 428 LQKDPEKRLGFRD 440

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 16  EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 71
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E     +   + ++    T      +   + ++++    CH +
Sbjct: 72  VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 130 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 186
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 246
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 247 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 12/253 (4%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           LGRG FG    C    TG+ YACKK+ K++LK          E +I+  +     IV+  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGH----YTERAAAAVGKTILRIVKVCHENGVM 204
            A+E K  + LVM +  GG++   I N       + E  A      I+  ++  H+  ++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYYMAPEVLR-RNYGP 262
           +RDLKPEN L  D   +  ++  D GL++  K G+   +   G+P +MAPE+L    Y  
Sbjct: 312 YRDLKPENVLLDD---DGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 263 EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP-KVSKEAKELVKNM 321
            +D ++ GV +Y ++    PF A  E+ + +  ++ ++  +   +P K S  +K+  + +
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 322 LDPNPYNRLTLEE 334
           L  +P  RL   +
Sbjct: 428 LQKDPEKRLGFRD 440

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 10  EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 65
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E     +   + ++    T      +   + ++++    CH +
Sbjct: 66  VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 124 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 17/209 (8%)
Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
           + ++Y     +G G +G     +++++G   A KK+++   ++ I      RE+ +++H+
Sbjct: 49  VPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSR-PFQSIIHAKRTYRELRLLKHM 107
Query: 139 PKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
            KH N++      T   + E+ + +YLV  L  G +L + IV     T+     +   IL
Sbjct: 108 -KHENVIGLLDVFTPATSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQIL 164
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
           R +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V + +Y A
Sbjct: 165 RGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLA--RHTDDEMTGYVATRWYRA 219
Query: 253 PEVLRR--NYGPEIDVWSAGVIIYILLCG 279
           PE++    +Y   +D+WS G I+  LL G
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTG 248

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 64
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E         + ++    T      +   + ++++    CH +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 123 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 63
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E         + ++    T      +   + ++++    CH +
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 122 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 63
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E         + ++    T      +   + ++++    CH +
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 122 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 12  EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 67
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E     +   + ++    T      +   + ++++    CH +
Sbjct: 68  VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 126 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 47/312 (15%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           ++ D+Y   + +G G +G+        TG+  A KKI         +     RE++I++H
Sbjct: 51  DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPN-AFDVVTNAKRTLRELKILKH 109
Query: 138 LPKHPNIVTYKE------AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             KH NI+  K+       Y +  ++Y+V++L E  +L   I +    T          +
Sbjct: 110 F-KHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQL 167
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQ---FCEIVG 246
           LR +K  H   V+HRDLKP N L    +EN +LK  DFG++  +   P E      E V 
Sbjct: 168 LRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 224
Query: 247 SPYYMAPEVL--RRNYGPEIDVWSAGVI---------------------IYILLCGVPPF 283
           + +Y APE++     Y   ID+WS G I                     + +++ G P  
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 284
Query: 284 WAETEEGI--AHAIIRGKIDFERDPW----PKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
                 G     A I+     +  PW    P   ++A  L+  ML   P  R++    L 
Sbjct: 285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344
Query: 338 NPWIKNDNHAPN 349
           +P++    H P+
Sbjct: 345 HPFLAK-YHDPD 355

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 64
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E         + ++    T      +   + ++++    CH +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 123 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 64
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E         + ++    T      +   + ++++    CH +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 123 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 130/309 (42%), Gaps = 49/309 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 12  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLRE 69
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 70  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 126
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPF---------------WA 285
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F                 
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 243
Query: 286 ETEEGIAHAIIRGKI--------DFERDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
             E+   + II  K            + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 244 SPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 303
Query: 334 EVLENPWIK 342
           + L +P+++
Sbjct: 304 QALAHPYLE 312

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 14  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 71
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 72  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 128
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPF----------------W 284
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F                 
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 285 AETEEGIAHAIIRGKIDF-------ERDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
           + ++E +   I     ++        + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 246 SPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 334 EVLENPWIK 342
           + L +P+++
Sbjct: 306 QALAHPYLE 314

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 14  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 71
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 72  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 128
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKIXDFGLARVADPDHDHTGFLT 185
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPF----------------W 284
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F                 
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 285 AETEEGIAHAIIRGKIDF-------ERDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
           + ++E +   I     ++        + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 246 SPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 334 EVLENPWIK 342
           + L +P+++
Sbjct: 306 QALAHPYLE 314

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 11  EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 66
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E     +   + ++    T      +   + ++++    CH +
Sbjct: 67  VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 125 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 13  EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 68
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E     +   + ++    T      +   + ++++    CH +
Sbjct: 69  VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 127 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 183
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 243
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 244 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 10  EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 65
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E     +   + ++    T      +   + ++++    CH +
Sbjct: 66  VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 124 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 12  EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 67
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E     +   + ++    T      +   + ++++    CH +
Sbjct: 68  VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 126 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 128/290 (44%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 11  EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 66
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E     +   + ++    T      +   + ++++    CH +
Sbjct: 67  VKLLDVIHTENKLYLVFEFLH--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 125 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 82.0 bits (201), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 12/253 (4%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           LGRG FG    C    TG+ YACKK+ K++LK          E +I+  +     IV+  
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGH----YTERAAAAVGKTILRIVKVCHENGVM 204
            A+E K  + LVM +  GG++   I N       + E  A      I+  ++  H+  ++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYYMAPEVLR-RNYGP 262
           +RDLKPEN L  D   +  ++  D GL++  K G+   +   G+P +MAPE+L    Y  
Sbjct: 312 YRDLKPENVLLDD---DGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 263 EIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP-KVSKEAKELVKNM 321
            +D ++ GV +Y ++    PF A  E+ + +  ++ ++  +   +P K S  +K+  + +
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVTYPDKFSPASKDFCEAL 427
Query: 322 LDPNPYNRLTLEE 334
           L  +P  RL   +
Sbjct: 428 LQKDPEKRLGFRD 440

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 22  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 79
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 80  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 136
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 137 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 193
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F  +   + + H + I G
Sbjct: 194 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 253
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
               E                     + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 254 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 313
Query: 334 EVLENPWIK 342
           + L +P+++
Sbjct: 314 QALAHPYLE 322

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 14  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 71
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 72  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 128
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F  +   + + H + I G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
               E                     + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 246 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 334 EVLENPWIK 342
           + L +P+++
Sbjct: 306 QALAHPYLE 314

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 82.0 bits (201), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +DF L+      ++    V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDFYLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 129/290 (44%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 64
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E     +L D  ++    T      +   + ++++    CH +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQ-DLKD-FMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKPEN L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 123 RVLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 124/268 (46%), Gaps = 29/268 (10%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D +   K +GRG F         +TG+ YA K + K  +    ++   R E +++ +  +
Sbjct: 61  DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGK----TILRIVK 196
              I     A++D++ +YLVME   GG+L   +   G   ER  A + +     I+  + 
Sbjct: 121 R-WITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFG---ERIPAEMARFYLAEIVMAID 176
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIV--GSPYYMAPE 254
             H  G +HRD+KP+N L         ++  DFG  +  +       +V  G+P Y++PE
Sbjct: 177 SVHRLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPE 233
Query: 255 VLR--------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP 306
           +L+         +YGPE D W+ GV  Y +  G  PF+A++       I+  K   E   
Sbjct: 234 ILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK---EHLS 290
Query: 307 WP----KVSKEAKELVKNMLDPNPYNRL 330
            P     V +EA++ ++ +L P P  RL
Sbjct: 291 LPLVDEGVPEEARDFIQRLLCP-PETRL 317

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 34  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 91
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 92  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 148
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 205
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F  +   + + H + I G
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 265
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
               E                     + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 266 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 325
Query: 334 EVLENPWIK 342
           + L +P+++
Sbjct: 326 QALAHPYLE 334

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 47/312 (15%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           ++ D+Y   + +G G +G+        TG+  A KKI         +     RE++I++H
Sbjct: 52  DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPN-AFDVVTNAKRTLRELKILKH 110
Query: 138 LPKHPNIVTYKE------AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
             KH NI+  K+       Y +  ++Y+V++L E  +L   I +    T          +
Sbjct: 111 F-KHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQL 168
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQ---FCEIVG 246
           LR +K  H   V+HRDLKP N L    +EN +LK  DFG++  +   P E      E V 
Sbjct: 169 LRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 225
Query: 247 SPYYMAPEVL--RRNYGPEIDVWSAGVI---------------------IYILLCGVPPF 283
           + +Y APE++     Y   ID+WS G I                     + +++ G P  
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 285
Query: 284 WAETEEGI--AHAIIRGKIDFERDPW----PKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
                 G     A I+     +  PW    P   ++A  L+  ML   P  R++    L 
Sbjct: 286 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 345
Query: 338 NPWIKNDNHAPN 349
           +P++    H P+
Sbjct: 346 HPFLAK-YHDPD 356

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 16  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 73
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 74  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 130
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F  +   + + H + I G
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 247
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
               E                     + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 248 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 307
Query: 334 EVLENPWIK 342
           + L +P+++
Sbjct: 308 QALAHPYLE 316

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 129/290 (44%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 12  EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 67
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E  +  +   + ++    T      +   + ++++    CH +
Sbjct: 68  VKLLDVIHTENKLYLVFEHVD--QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 126 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 14  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 71
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 72  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 128
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F  +   + + H + I G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
               E                     + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 246 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 334 EVLENPWIK 342
           + L +P+++
Sbjct: 306 QALAHPYLE 314

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 12  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLRE 69
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 70  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 126
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F  +   + + H + I G
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 243
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
               E                     + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 244 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 303
Query: 334 EVLENPWIK 342
           + L +P+++
Sbjct: 304 QALAHPYLE 312

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 14  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 71
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 72  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 128
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F  +   + + H + I G
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
               E                     + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 246 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 334 EVLENPWIK 342
           + L +P+++
Sbjct: 306 QALAHPYLE 314

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 128/306 (41%), Gaps = 54/306 (17%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           +Y   K LG G  G+     + +  +  A KKI    L     +    RE++I+R L  H
Sbjct: 12  RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIV---LTDPQSVKHALREIKIIRRL-DH 67
Query: 142 PNIVTYKE--------------AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAV 187
            NIV   E              +  + +++Y+V E  E       ++ +G   E  A   
Sbjct: 68  DNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETD--LANVLEQGPLLEEHARLF 125
Query: 188 GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE----QFCE 243
              +LR +K  H   V+HRDLKP N      +E+  LK  DFGL+    P         E
Sbjct: 126 MYQLLRGLKYIHSANVLHRDLKPANLFI--NTEDLVLKIGDFGLARIMDPHYSHKGHLSE 183
Query: 244 IVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCG-------------------VPP 282
            + + +Y +P +L    NY   ID+W+AG I   +L G                   +P 
Sbjct: 184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPV 243
Query: 283 FWAETEEGIAHAI---IRGKIDFERDPW----PKVSKEAKELVKNMLDPNPYNRLTLEEV 335
              E  + +   I   IR  +     P     P +S+EA + ++ +L  +P +RLT EE 
Sbjct: 244 VHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEA 303
Query: 336 LENPWI 341
           L +P++
Sbjct: 304 LSHPYM 309

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 19  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLRE 76
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 77  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 133
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 190
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F  +   + + H + I G
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 250
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
               E                     + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 251 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 310
Query: 334 EVLENPWIK 342
           + L +P+++
Sbjct: 311 QALAHPYLE 319

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 20  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLRE 77
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 78  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 134
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 135 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 191
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F  +   + + H + I G
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 251
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
               E                     + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 252 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 311
Query: 334 EVLENPWIK 342
           + L +P+++
Sbjct: 312 QALAHPYLE 320

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 11  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLRE 68
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 69  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 125
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 126 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 182
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F  +   + + H + I G
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 242
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
               E                     + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 243 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 302
Query: 334 EVLENPWIK 342
           + L +P+++
Sbjct: 303 QALAHPYLE 311

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 18  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLRE 75
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 76  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 132
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F  +   + + H + I G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
               E                     + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 334 EVLENPWIK 342
           + L +P+++
Sbjct: 310 QALAHPYLE 318

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 18  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLRE 75
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 76  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 132
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F  +   + + H + I G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
               E                     + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 334 EVLENPWIK 342
           + L +P+++
Sbjct: 310 QALAHPYLE 318

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK + FGL+      ++    V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILGFGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 131/308 (42%), Gaps = 49/308 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 16  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ--RTLRE 73
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 74  IKILLAF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 130
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F  +   + + H + I G
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 247
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
               E                     + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 248 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 307
Query: 334 EVLENPWI 341
           + L +P++
Sbjct: 308 QALAHPYL 315

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 18  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQ--RTLRE 75
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 76  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 132
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F  +   + + H + I G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
               E                     + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 334 EVLENPWIK 342
           + L +P+++
Sbjct: 310 QALAHPYLE 318

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 18  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLRE 75
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 76  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 132
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLX 189
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F  +   + + H + I G
Sbjct: 190 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
               E                     + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 334 EVLENPWIK 342
           + L +P+++
Sbjct: 310 QALAHPYLE 318

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 19  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLRE 76
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 77  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 133
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLX 190
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F  +   + + H + I G
Sbjct: 191 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 250
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
               E                     + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 251 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 310
Query: 334 EVLENPWIK 342
           + L +P+++
Sbjct: 311 QALAHPYLE 319

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 12  EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 67
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E     +     ++    T      +   + ++++    CH +
Sbjct: 68  VKLLDVIHTENKLYLVFEFLH--QDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 126 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +D GL+      ++    V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDAGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           +YT  + +G G +G+    ++       A KKI+  + +T        RE++I+    +H
Sbjct: 44  RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQ--RTLREIQILLRF-RH 100
Query: 142 PNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
            N++  ++       E    +Y+V +L E  +L+ +++     +          ILR +K
Sbjct: 101 ENVIGIRDILRASTLEAMRDVYIVQDLMET-DLY-KLLKSQQLSNDHICYFLYQILRGLK 158
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FCEIVGSPYYMA 252
             H   V+HRDLKP N L    +    LK  DFGL+    P         E V + +Y A
Sbjct: 159 YIHSANVLHRDLKPSNLLI---NTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRA 215
Query: 253 PEVL--RRNYGPEIDVWSAGVIIYILLCGVPPF----------------WAETEEGIAHA 294
           PE++   + Y   ID+WS G I+  +L   P F                 + ++E +   
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 295 I-IRGKIDFERDP----------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           I ++ +   +  P          +PK   +A +L+  ML  NP  R+T+EE L +P+++ 
Sbjct: 276 INMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQ 335

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 17/201 (8%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV- 145
           + +G G +G     ++    +  A KK+++   ++ I      RE+ +++HL KH N++ 
Sbjct: 26  RPVGSGAYGSVCSAYDARLRQKVAVKKLSR-PFQSLIHARRTYRELRLLKHL-KHENVIG 83
Query: 146 -----TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
                T   + ED   +YLV  L   G   + IV     ++     +   +LR +K  H 
Sbjct: 84  LLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 141
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-- 258
            G++HRDLKP N      +E+ +L+ +DFGL+   +  E+    V + +Y APE++    
Sbjct: 142 AGIIHRDLKPSNVAV---NEDCELRILDFGLA--RQADEEMTGYVATRWYRAPEIMLNWM 196
Query: 259 NYGPEIDVWSAGVIIYILLCG 279
           +Y   +D+WS G I+  LL G
Sbjct: 197 HYNQTVDIWSVGCIMAELLQG 217

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A +KI+  + +T        RE
Sbjct: 18  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQ--RTLRE 75
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 76  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICY 132
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F  +   + + H + I G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
               E                     + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 334 EVLENPWIK 342
           + L +P+++
Sbjct: 310 QALAHPYLE 318

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L  G +L + IV     T+     +   ILR 
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +D GL+      ++    V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDRGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 129/290 (44%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 11  EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 66
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E     +L D  ++    T      +   + ++++    CH +
Sbjct: 67  VKLLDVIHTENKLYLVFEFL-SMDLKD-FMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 125 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 132/309 (42%), Gaps = 49/309 (15%)
Query: 75  AEGNILD---KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
             G + D   +YT    +G G +G+    ++       A KKI+  + +T        RE
Sbjct: 18  VRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ--RTLRE 75
Query: 132 VEIMRHLPKHPNIVTYKE-----AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA 186
           ++I+    +H NI+   +       E    +Y+V +L E  +L+ +++   H +      
Sbjct: 76  IKILLRF-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKCQHLSNDHICY 132
Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FC 242
               ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 243 EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAI-IRG 298
           E V + +Y APE++   + Y   ID+WS G I+  +L   P F  +   + + H + I G
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 299 KIDFE---------------------RDPW----PKVSKEAKELVKNMLDPNPYNRLTLE 333
               E                     + PW    P    +A +L+  ML  NP+ R+ +E
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 334 EVLENPWIK 342
           + L +P+++
Sbjct: 310 QALAHPYLE 318

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 129/290 (44%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 12  EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 67
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E     +L D  ++    T      +   + ++++    CH +
Sbjct: 68  VKLLDVIHTENKLYLVFEFL-SMDLKD-FMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 126 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A  KI   +L TE +       RE+ +++ L  HPNI
Sbjct: 9   EKIGEGTYGVVYKARNKLTGEVVALXKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 64
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E         + ++    T      +   + ++++    CH +
Sbjct: 65  VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 123 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 126/290 (43%), Gaps = 42/290 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A  KI   +L TE +       RE+ +++ L  HPNI
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALXKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 63
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK---VCHEN 201
           V   +    ++ +YLV E         + ++    T      +   + ++++    CH +
Sbjct: 64  VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLR--R 258
            V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L   +
Sbjct: 122 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS------- 311
            Y   +D+WS G I   ++     F  ++E      I R     +   WP V+       
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 312 ------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                             ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 17/207 (8%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H+ K
Sbjct: 22  ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHM-K 79
Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           H N++      T   + E+ + +YLV  L   G   + IV     T+     +   ILR 
Sbjct: 80  HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +K  H   ++HRDLKP N      +E+ +LK +D GL+      ++    V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDCELKILDGGLA--RHTDDEMTGYVATRWYRAPE 192
Query: 255 VLRR--NYGPEIDVWSAGVIIYILLCG 279
           ++    +Y   +D+WS G I+  LL G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTG 219

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 129/298 (43%), Gaps = 58/298 (19%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
           +++G G +G+ ++     TGE  A KKI   +L TE +       RE+ +++ L  HPNI
Sbjct: 8   EKIGEGTYGVVYKARNKLTGEVVALKKI---RLDTETEGVPSTAIREISLLKEL-NHPNI 63
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK-------- 196
           V   +    ++ +YLV E           V++   T   A+A+    L ++K        
Sbjct: 64  VKLLDVIHTENKLYLVFEH----------VHQDLKTFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 197 ---VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMA 252
               CH + V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y A
Sbjct: 114 GLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 170
Query: 253 PEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           PE+L   + Y   +D+WS G I   ++     F  ++E      I R     +   WP V
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGV 230
Query: 311 S-------------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           +                         ++ + L+  ML  +P  R++ +  L +P+ ++
Sbjct: 231 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 143/336 (42%), Gaps = 54/336 (16%)
Query: 51  VSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYA 110
           ++KH  N+ K  +  Q  SV    +   +L +Y   K +G G  GI    ++       A
Sbjct: 33  IAKHY-NMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVA 91
Query: 111 CKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELC 164
            KK+++   + +       RE+ +M+ +  H NI+      T ++  E+   +YLVMEL 
Sbjct: 92  IKKLSR-PFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 165 EGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQL 224
           +      +++      ER +  + + +  I K  H  G++HRDLKP N +      +  L
Sbjct: 150 DAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTL 203
Query: 225 KAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII---------- 273
           K +DFGL+            V + YY APEV L   Y   +D+WS G I+          
Sbjct: 204 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263
Query: 274 -----------YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------- 310
                       I   G P P + +  +      +  +  +    +PK+           
Sbjct: 264 PGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSE 323
Query: 311 -----SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
                + +A++L+  ML  +P  R+++++ L++P+I
Sbjct: 324 HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 141/330 (42%), Gaps = 55/330 (16%)
Query: 58  VDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKE 117
           + K  +  Q  SV    +   +L +Y   K +G G  GI    F+   G   A KK+++ 
Sbjct: 1   MSKSKVDNQFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR- 59
Query: 118 KLKTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFD 171
             + +       RE+ +++ +  H NI+      T ++  E+   +YLVMEL +      
Sbjct: 60  PFQNQTHAKRAYRELVLLKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LC 116
Query: 172 RIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL 231
           ++++     ER +  + + +  I K  H  G++HRDLKP N +      +  LK +DFGL
Sbjct: 117 QVIHMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL 172
Query: 232 SIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPF------- 283
           +            V + YY APEV L   Y   +D+WS G I+  L+ G   F       
Sbjct: 173 ARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHID 232
Query: 284 -WAETEEGIA----------HAIIRGKIDFERDPWPKV---------------------S 311
            W +  E +              +R  ++  R  +P +                     +
Sbjct: 233 QWNKVIEQLGTPSAEFMAALQPTVRNYVE-NRPKYPGIKFEELFPDWIFPSESERDKIKT 291
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
            +A++L+  ML  +P  R++++E L +P+I
Sbjct: 292 SQARDLLSKMLVIDPDKRISVDEALRHPYI 321

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 116/251 (46%), Gaps = 37/251 (14%)
Query: 49  ESVSKHASNVDKKSISF-QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGE 107
           E+ S   S+    S SF +L++V +N  E  I      G ++G G FG+ ++ +   T  
Sbjct: 1   ENKSLEVSDTRFHSFSFYELKNVTNNFDERPI---SVGGNKMGEGGFGVVYKGYVNNT-- 55
Query: 108 TYACKKIA------KEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM 161
           T A KK+A       E+LK + D     +E+++M    +H N+V       D D + LV 
Sbjct: 56  TVAVKKLAAMVDITTEELKQQFD-----QEIKVMAKC-QHENLVELLGFSSDGDDLCLVY 109
Query: 162 ELCEGGELFDRI-----VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA 216
                G L DR+          +  R   A G      +   HEN  +HRD+K  N L  
Sbjct: 110 VYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA--NGINFLHENHHIHRDIKSANILL- 166
Query: 217 DGSENSQLKAIDFGLSIFFKPGEQFCE------IVGSPYYMAPEVLRRNYGPEIDVWSAG 270
              E    K  DFGL+   +  E+F +      IVG+  YMAPE LR    P+ D++S G
Sbjct: 167 --DEAFTAKISDFGLA---RASEKFAQTVMXSRIVGTTAYMAPEALRGEITPKSDIYSFG 221
Query: 271 VIIYILLCGVP 281
           V++  ++ G+P
Sbjct: 222 VVLLEIITGLP 232

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 116/251 (46%), Gaps = 37/251 (14%)
Query: 49  ESVSKHASNVDKKSISF-QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGE 107
           E+ S   S+    S SF +L++V +N  E  I      G ++G G FG+ ++ +   T  
Sbjct: 1   ENKSLEVSDTRFHSFSFYELKNVTNNFDERPI---SVGGNKMGEGGFGVVYKGYVNNT-- 55
Query: 108 TYACKKIA------KEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM 161
           T A KK+A       E+LK + D     +E+++M    +H N+V       D D + LV 
Sbjct: 56  TVAVKKLAAMVDITTEELKQQFD-----QEIKVMAKC-QHENLVELLGFSSDGDDLCLVY 109
Query: 162 ELCEGGELFDRI-----VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA 216
                G L DR+          +  R   A G      +   HEN  +HRD+K  N L  
Sbjct: 110 VYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA--NGINFLHENHHIHRDIKSANILL- 166
Query: 217 DGSENSQLKAIDFGLSIFFKPGEQFCE------IVGSPYYMAPEVLRRNYGPEIDVWSAG 270
              E    K  DFGL+   +  E+F +      IVG+  YMAPE LR    P+ D++S G
Sbjct: 167 --DEAFTAKISDFGLA---RASEKFAQTVMXXRIVGTTAYMAPEALRGEITPKSDIYSFG 221
Query: 271 VIIYILLCGVP 281
           V++  ++ G+P
Sbjct: 222 VVLLEIITGLP 232

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 136/296 (45%), Gaps = 47/296 (15%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y     +G G +G      +  +GE  A KK+++   ++EI      RE+ +++H+ +H 
Sbjct: 44  YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRELLLLKHM-QHE 101
Query: 143 NIVTYKEAYEDKDAI------YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
           N++   + +    ++      YLVM   +      +I+    ++E     +   +L+ +K
Sbjct: 102 NVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGM-EFSEEKIQYLVYQMLKGLK 158
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
             H  GV+HRDLKP N      +E+ +LK +DFGL+       +    V + +Y APEV+
Sbjct: 159 YIHSAGVVHRDLKPGNLAV---NEDCELKILDFGLAR--HADAEMTGYVVTRWYRAPEVI 213
Query: 257 RR--NYGPEIDVWSAGVIIYILL---------------------CGVP--PFWAETEEGI 291
               +Y   +D+WS G I+  +L                      GVP   F  +  +  
Sbjct: 214 LSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA 273
Query: 292 AHAIIRG-----KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           A + I+      + DF +  +P+ S +A +L++ ML+ +   RLT  + L +P+ +
Sbjct: 274 AKSYIQSLPQTPRKDFTQ-LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 143/336 (42%), Gaps = 54/336 (16%)
Query: 51  VSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYA 110
           ++KH  N+ K  +  Q  SV    +   +L +Y   K +G G  GI    ++       A
Sbjct: 33  IAKHY-NMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVA 91
Query: 111 CKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELC 164
            KK+++   + +       RE+ +M+ +  H NI+      T ++  E+   +YLVMEL 
Sbjct: 92  IKKLSRP-FQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELM 149
Query: 165 EGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQL 224
           +      +++      ER +  + + +  I K  H  G++HRDLKP N +      +  L
Sbjct: 150 DAN--LCQVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTL 203
Query: 225 KAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII---------- 273
           K +DFGL+            V + YY APEV L   Y   +D+WS G I+          
Sbjct: 204 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 263
Query: 274 -----------YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------- 310
                       I   G P P + +  +      +  +  +    +PK+           
Sbjct: 264 PGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSE 323
Query: 311 -----SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
                + +A++L+  ML  +P  R+++++ L++P+I
Sbjct: 324 HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 359

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 135/308 (43%), Gaps = 45/308 (14%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP-- 139
           +Y    E+G G +G   +  +++ G  +   K  + +   E       REV ++RHL   
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 140 KHPNIVTYKE----AYEDKDA-IYLVMELCEG--GELFDRIVNKGHYTERAAAAVGKTIL 192
           +HPN+V   +    +  D++  + LV E  +       D++   G  TE     + + +L
Sbjct: 72  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ-LL 130
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
           R +   H + V+HRDLKP+N L    + + Q+K  DFGL+  +        +V + +Y A
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 253 PEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAI-----IRGKIDFERD- 305
           PEV L+ +Y   +D+WS G I   +    P F   ++      I     + G+ D+ RD 
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 306 -------------PWPKVSKEAKELVKNM----LDPNPYNRLTLEEVLENPWIKN----- 343
                        P  K   +  EL K++    L  NP  R++    L +P+ ++     
Sbjct: 248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCK 307
Query: 344 ---DNHAP 348
              D+H P
Sbjct: 308 ENLDSHLP 315

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 128/300 (42%), Gaps = 27/300 (9%)
Query: 57  NVDKKSISFQ------LRSVVSNPAEGNILDKYTFGK--ELGRGEFGITHQCFEIETGET 108
            +  + +SF+      L+S   +P+      + +F +   LG G +G   +    E G  
Sbjct: 25  QLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRL 84
Query: 109 YACKKIAKEKLKTEIDIDDVRREVEIMRH--LPKHPNIVTYKEAYEDKDAIYLVMELCEG 166
           YA K+        +   D  R+  E+  H  + +HP  V  ++A+E+   +YL  ELC G
Sbjct: 85  YAVKRSMSPFRGPK---DRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-G 140
Query: 167 GELFDRIVNKGHYTERAA--AAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQL 224
             L       G     A     +  T+L +  + H  G++H D+KP N          + 
Sbjct: 141 PSLQQHCEAWGASLPEAQVWGYLRDTLLALAHL-HSQGLVHLDVKPANIFLGP---RGRC 196
Query: 225 KAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVP-PF 283
           K  DFGL +            G P YMAPE+L+ +YG   DV+S G+ I  + C +  P 
Sbjct: 197 KLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPH 256
Query: 284 WAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
             E  + +    +  +          +S E + ++  ML+P+P  R T E +L  P ++ 
Sbjct: 257 GGEGWQQLRQGYLPPEFT------AGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 138/322 (42%), Gaps = 55/322 (17%)
Query: 66  QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI 125
           Q  SV    +   +L +Y   K +G G  GI    F+   G   A KK+++   + +   
Sbjct: 7   QFYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSR-PFQNQTHA 65
Query: 126 DDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY 179
               RE+ +++ +  H NI+      T ++  E+   +YLVMEL +      ++++    
Sbjct: 66  KRAYRELVLLKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELD 122
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
            ER +  + + +  I K  H  G++HRDLKP N +      +  LK +DFGL+       
Sbjct: 123 HERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTASTNF 178
Query: 240 QFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPF--------WAETEEG 290
                V + YY APEV L   Y   +D+WS G I+  L+ G   F        W +  E 
Sbjct: 179 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQ 238
Query: 291 IA----------HAIIRGKIDFERDPWPKV---------------------SKEAKELVK 319
           +              +R  ++  R  +P +                     + +A++L+ 
Sbjct: 239 LGTPSAEFMAALQPTVRNYVE-NRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLS 297
Query: 320 NMLDPNPYNRLTLEEVLENPWI 341
            ML  +P  R++++E L +P+I
Sbjct: 298 KMLVIDPDKRISVDEALRHPYI 319

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 113/247 (45%), Gaps = 30/247 (12%)
Query: 130 REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGK 189
           REV +++ L KH NIVT  +    + ++ LV E  +  +L   + + G+        +  
Sbjct: 49  REVSLLKDL-KHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFL 106
Query: 190 -TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL----SIFFKPGEQFCEI 244
             +LR +  CH   V+HRDLKP+N L    +E  +LK  DFGL    SI   P + +   
Sbjct: 107 FQLLRGLAYCHRQKVLHRDLKPQNLLI---NERGELKLADFGLARAKSI---PTKTYDNE 160
Query: 245 VGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF 302
           V + +Y  P++L    +Y  +ID+W  G I Y +  G P F   T E   H I R     
Sbjct: 161 VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTP 220
Query: 303 ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNV-SLGGNVTSRIK 361
             + WP +    +    N      Y +   E +L        +HAP + S G ++ +++ 
Sbjct: 221 TEETWPGILSNEEFKTYN------YPKYRAEALL--------SHAPRLDSDGADLLTKLL 266
Query: 362 QFSIMNK 368
           QF   N+
Sbjct: 267 QFEGRNR 273

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 109/234 (46%), Gaps = 36/234 (15%)
Query: 65  FQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIA------KEK 118
           ++L++V +N  E  I      G ++G G FG+ ++ +   T  T A KK+A       E+
Sbjct: 12  YELKNVTNNFDERPI---SVGGNKMGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEE 66
Query: 119 LKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----- 173
           LK + D     +E+++M    +H N+V       D D + LV      G L DR+     
Sbjct: 67  LKQQFD-----QEIKVMAKC-QHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG 120
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI 233
                +  R   A G      +   HEN  +HRD+K  N L     E    K  DFGL+ 
Sbjct: 121 TPPLSWHMRCKIAQGAA--NGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLA- 174
Query: 234 FFKPGEQFCE------IVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVP 281
             +  E+F +      IVG+  YMAPE LR    P+ D++S GV++  ++ G+P
Sbjct: 175 --RASEKFAQXVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLP 226

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/296 (25%), Positives = 136/296 (45%), Gaps = 47/296 (15%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y     +G G +G      +  +GE  A KK+++   ++EI      RE+ +++H+ +H 
Sbjct: 26  YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRELLLLKHM-QHE 83
Query: 143 NIVTYKEAYEDKDAI------YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
           N++   + +    ++      YLVM   +      +I+      E+    V + +L+ +K
Sbjct: 84  NVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGLKFSEEKIQYLVYQ-MLKGLK 140
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
             H  GV+HRDLKP N      +E+ +LK +DFGL+       +    V + +Y APEV+
Sbjct: 141 YIHSAGVVHRDLKPGNLAV---NEDCELKILDFGLAR--HADAEMTGYVVTRWYRAPEVI 195
Query: 257 RR--NYGPEIDVWSAGVIIYILL---------------------CGVP--PFWAETEEGI 291
               +Y   +D+WS G I+  +L                      GVP   F  +  +  
Sbjct: 196 LSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKA 255
Query: 292 AHAIIRG-----KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           A + I+      + DF +  +P+ S +A +L++ ML+ +   RLT  + L +P+ +
Sbjct: 256 AKSYIQSLPQTPRKDFTQ-LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 127/287 (44%), Gaps = 47/287 (16%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKI--AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           LG+G FG   +         YA KKI   +EKL T      +  EV ++  L  H  +V 
Sbjct: 14  LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST------ILSEVMLLASL-NHQYVVR 66
Query: 147 YKEAY-------------EDKDAIYLVMELCEGGELFDRIVNKGHYTER-AAAAVGKTIL 192
           Y  A+             + K  +++ ME CE G L+D I ++    +R     + + IL
Sbjct: 67  YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-------------PG- 238
             +   H  G++HRDLKP N +F D S N  +K  DFGL+                 PG 
Sbjct: 127 EALSYIHSQGIIHRDLKPMN-IFIDESRN--VKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 239 -EQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHA 294
            +     +G+  Y+A EVL    +Y  +ID++S G+I + ++    PF    E   I   
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKK 240
Query: 295 IIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           +    I+F  D      K  K++++ ++D +P  R     +L + W+
Sbjct: 241 LRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           +T  +++G+G FG   +  +  T +  A K I  +  + E +I+D+++E+ ++      P
Sbjct: 24  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQC-DSP 80
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
            +  Y  +Y     ++++ME   GG   D ++  G   E   A + + IL+ +   H   
Sbjct: 81  YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEK 139
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCEIVGSPYYMAPEVLRRN-Y 260
            +HRD+K  N L    SE+ ++K  DFG++      + +    VG+P++MAPEV++++ Y
Sbjct: 140 KIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 196
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
             + D+WS G+    L  G PP        +   I +         +   SK  KE V+ 
Sbjct: 197 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY---SKPLKEFVEA 253
Query: 321 MLDPNPYNRLTLEEVLENPWI 341
            L+  P  R T +E+L++ +I
Sbjct: 254 CLNKEPSFRPTAKELLKHKFI 274

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           T G+ +G G FG  ++      G+ +     K+      T   +   + EV ++R   +H
Sbjct: 15  TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 67
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
            NI+ +   Y  K  + +V + CEG  L+  +  ++  +  +    + +   R +   H 
Sbjct: 68  VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 126
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF---FKPGEQFCEIVGSPYYMAPEVLR 257
             ++HRDLK  N       E++ +K  DFGL+     +    QF ++ GS  +MAPEV+R
Sbjct: 127 KSIIHRDLKSNNIFL---HEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 183
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
                 Y  + DV++ G+++Y L+ G  P+
Sbjct: 184 MQDSNPYSFQSDVYAFGIVLYELMTGQLPY 213

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 132/285 (46%), Gaps = 22/285 (7%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           ELG G  G+  +     +G   A +K+   ++K  I  + + RE++++ H    P IV +
Sbjct: 13  ELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 69
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHR 206
             A+     I + ME  +GG L   +   G   E+    V   +++ +    E + +MHR
Sbjct: 70  YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 207 DLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPE 263
           D+KP N L    +   ++K  DFG+S  +       F   VG+  YM+PE L+  +Y  +
Sbjct: 130 DVKPSNILV---NSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQ 183
Query: 264 IDVWSAGVIIYILLCG---VPPFWAETEEGIAHAIIRGKIDFERDPWPKV-----SKEAK 315
            D+WS G+ +  +  G   +PP  A+ +     AI         +P PK+     S E +
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQ 243
Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           + V   L  NP  R  L++++ + +IK  + A  V   G + S I
Sbjct: 244 DFVNKCLIKNPAERADLKQLMVHAFIKRSD-AEEVDFAGWLCSTI 287

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 29/269 (10%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKI-----AKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           ELGRG +G+  +   + +G+  A K+I     ++E+ +  +D+D   R V+        P
Sbjct: 58  ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC-------P 110
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGH-YTERAAAAVGKTILRIVKVCH 199
             VT+  A   +  +++ MEL +    + + ++++KG    E     +  +I++ ++  H
Sbjct: 111 FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 170
Query: 200 EN-GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-----KPGEQFCEIVGSPYYMAP 253
               V+HRD+KP N L    +   Q+K  DFG+S +      K  +  C+   +P  + P
Sbjct: 171 SKLSVIHRDVKPSNVLI---NALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINP 227
Query: 254 EVLRRNYGPEIDVWSAGVIIYILLCGVPPF--WAETEEGIAHAIIRGKIDFERDPWPKVS 311
           E+ ++ Y  + D+WS G+ +  L     P+  W    + +   +         D   K S
Sbjct: 228 ELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD---KFS 284
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPW 340
            E  +     L  N   R T  E++++P+
Sbjct: 285 AEFVDFTSQCLKKNSKERPTYPELMQHPF 313

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 135/304 (44%), Gaps = 45/304 (14%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           L  G F   ++  ++ +G  YA K++ + E+ K    I    +EV  M+ L  HPNIV +
Sbjct: 36  LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAII----QEVCFMKKLSGHPNIVQF 91
Query: 148 -------KEAYEDKDAIYLVM-ELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
                  KE  +   A +L++ ELC+G   E   ++ ++G  +      +     R V+ 
Sbjct: 92  CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQH 151
Query: 198 CHEN--GVMHRDLKPENFLFADGSENSQLKAIDFG--LSIFFKPGEQFC---------EI 244
            H     ++HRDLK EN L    S    +K  DFG   +I   P   +          EI
Sbjct: 152 MHRQKPPIIHRDLKVENLLL---SNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEI 208
Query: 245 V--GSPYYMAPEV--LRRNY--GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRG 298
               +P Y  PE+  L  N+  G + D+W+ G I+Y+L     PF    E+G    I+ G
Sbjct: 209 TRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF----EDGAKLRIVNG 264
Query: 299 KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTS 358
           K  +   P          L++ ML  NP  RL++ EV+    ++    A NV+    +T 
Sbjct: 265 K--YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ--LQEIAAARNVNPKSPITE 320
Query: 359 RIKQ 362
            ++Q
Sbjct: 321 LLEQ 324

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           +T  +++G+G FG   +  +  T +  A K I  +  + E +I+D+++E+ ++      P
Sbjct: 29  FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQC-DSP 85
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
            +  Y  +Y     ++++ME   GG   D ++  G   E   A + + IL+ +   H   
Sbjct: 86  YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEK 144
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCEIVGSPYYMAPEVLRRN-Y 260
            +HRD+K  N L    SE+ ++K  DFG++      + +    VG+P++MAPEV++++ Y
Sbjct: 145 KIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 201
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
             + D+WS G+    L  G PP        +   I +         +   SK  KE V+ 
Sbjct: 202 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY---SKPLKEFVEA 258
Query: 321 MLDPNPYNRLTLEEVLENPWI 341
            L+  P  R T +E+L++ +I
Sbjct: 259 CLNKEPSFRPTAKELLKHKFI 279

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 127/259 (49%), Gaps = 20/259 (7%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           +G+G FG  ++  +  T E  A K I  +  + E +I+D+++E+ ++      P I  Y 
Sbjct: 27  IGKGSFGEVYKGIDNHTKEVVAIKII--DLEEAEDEIEDIQQEITVLSQC-DSPYITRYF 83
Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDL 208
            +Y     ++++ME   GG   D ++  G   E   A + + IL+ +   H    +HRD+
Sbjct: 84  GSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKIHRDI 142
Query: 209 KPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCEIVGSPYYMAPEVLRRN-YGPEIDV 266
           K  N L    SE   +K  DFG++      + +    VG+P++MAPEV++++ Y  + D+
Sbjct: 143 KAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADI 199
Query: 267 WSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV----SKEAKELVKNML 322
           WS G+    L  G PP          H  +R      ++  P +    SK  KE V+  L
Sbjct: 200 WSLGITAIELAKGEPP------NSDLHP-MRVLFLIPKNSPPTLEGQHSKPFKEFVEACL 252
Query: 323 DPNPYNRLTLEEVLENPWI 341
           + +P  R T +E+L++ +I
Sbjct: 253 NKDPRFRPTAKELLKHKFI 271

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           IL+ +  CH  G+MHRD+KP N L     E+ +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVLI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
             PE+L   + Y   +D+WS G ++  ++    PF+      ++ +  A + G       
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
             K + E DP             W +         VS EA + +  +L  +  +RLT  E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 335 VLENPWI 341
            +E+P+ 
Sbjct: 318 AMEHPYF 324

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 138/329 (41%), Gaps = 53/329 (16%)
Query: 58  VDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKE 117
           + K  +  Q  SV    +   +L +Y   K +G G  GI    ++       A KK+++ 
Sbjct: 1   MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 60
Query: 118 KLKTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFD 171
             + +       RE+ +M+ +  H NI+      T ++  E+   +YLVMEL +      
Sbjct: 61  -FQNQTHAKRAYRELVLMKXV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LX 116
Query: 172 RIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL 231
           +++      ER +  + + +  I K  H  G++HRDLKP N +      +  LK +DFGL
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGL 172
Query: 232 SIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII----------------- 273
           +            V + YY APEV L   Y   +D+WS G I+                 
Sbjct: 173 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 274 ----YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SK 312
                I   G P P + +  +      +  +  +    +PK+                + 
Sbjct: 233 QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 292
Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           +A++L+  ML  +P  R+++++ L++P+I
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           T G+ +G G FG  ++      G+ +     K+      T   +   + EV ++R   +H
Sbjct: 27  TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 79
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
            NI+ +   Y  K  + +V + CEG  L+  +  ++  +  +    + +   R +   H 
Sbjct: 80  VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSI---FFKPGEQFCEIVGSPYYMAPEVLR 257
             ++HRDLK  N       E++ +K  DFGL+     +    QF ++ GS  +MAPEV+R
Sbjct: 139 KSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
                 Y  + DV++ G+++Y L+ G  P+
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 131/295 (44%), Gaps = 37/295 (12%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP-- 139
           +Y    E+G G +G   +  +++ G  +   K  + +   E       REV ++RHL   
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 140 KHPNIVTYKE----AYEDKDA-IYLVMELCEG--GELFDRIVNKGHYTERAAAAVGKTIL 192
           +HPN+V   +    +  D++  + LV E  +       D++   G  TE     + + +L
Sbjct: 72  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ-LL 130
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
           R +   H + V+HRDLKP+N L    + + Q+K  DFGL+  +        +V + +Y A
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 253 PEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAI-----IRGKIDFERD- 305
           PEV L+ +Y   +D+WS G I   +    P F   ++      I     + G+ D+ RD 
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 306 -------------PWPKVSKEAKELVKNM----LDPNPYNRLTLEEVLENPWIKN 343
                        P  K   +  EL K++    L  NP  R++    L +P+ ++
Sbjct: 248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           +T  +++G+G FG   +  +  T +  A K I  +  + E +I+D+++E+ ++      P
Sbjct: 9   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQC-DSP 65
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
            +  Y  +Y     ++++ME   GG   D ++  G   E   A + + IL+ +   H   
Sbjct: 66  YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCEIVGSPYYMAPEVLRRN-Y 260
            +HRD+K  N L    SE+ ++K  DFG++      + +    VG+P++MAPEV++++ Y
Sbjct: 125 KIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAY 181
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
             + D+WS G+    L  G PP        +   I +         +   SK  KE V+ 
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY---SKPLKEFVEA 238
Query: 321 MLDPNPYNRLTLEEVLENPWI 341
            L+  P  R T +E+L++ +I
Sbjct: 239 CLNKEPSFRPTAKELLKHKFI 259

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 139/329 (42%), Gaps = 53/329 (16%)
Query: 58  VDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKE 117
           + K  +  Q  SV    +   +L +Y   K +G G  GI    ++       A KK+++ 
Sbjct: 1   MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR- 59
Query: 118 KLKTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFD 171
             + +       RE+ +M+ +  H NI+      T ++  E+   +YLVMEL +      
Sbjct: 60  PFQNQTHAKRAYRELVLMKXV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LX 116
Query: 172 RIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL 231
           +++      ER +  + + +L  +K  H  G++HRDLKP N +      +  LK +DFGL
Sbjct: 117 QVIQMELDHERMSYLLYQ-MLXGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGL 172
Query: 232 SIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII----------------- 273
           +            V + YY APEV L   Y   +D+WS G I+                 
Sbjct: 173 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 274 ----YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SK 312
                I   G P P + +  +      +  +  +    +PK+                + 
Sbjct: 233 QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 292
Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           +A++L+  ML  +P  R+++++ L++P+I
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/261 (26%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           +T  +++G+G FG   +  +  T +  A K I  +  + E +I+D+++E+ ++      P
Sbjct: 9   FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQC-DSP 65
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
            +  Y  +Y     ++++ME   GG   D ++  G   E   A + + IL+ +   H   
Sbjct: 66  YVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEK 124
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCEIVGSPYYMAPEVLRRN-Y 260
            +HRD+K  N L    SE+ ++K  DFG++      + +    VG+P++MAPEV++++ Y
Sbjct: 125 KIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAY 181
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
             + D+WS G+    L  G PP        +   I +         +   SK  KE V+ 
Sbjct: 182 DSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY---SKPLKEFVEA 238
Query: 321 MLDPNPYNRLTLEEVLENPWI 341
            L+  P  R T +E+L++ +I
Sbjct: 239 CLNKEPSFRPTAKELLKHKFI 259

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 130/294 (44%), Gaps = 37/294 (12%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP-- 139
           +Y    E+G G +G   +  +++ G  +   K  + +   E       REV ++RHL   
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 140 KHPNIVTYKE----AYEDKDA-IYLVMELCEG--GELFDRIVNKGHYTERAAAAVGKTIL 192
           +HPN+V   +    +  D++  + LV E  +       D++   G  TE     + + +L
Sbjct: 72  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ-LL 130
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
           R +   H + V+HRDLKP+N L    + + Q+K  DFGL+  +        +V + +Y A
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187
Query: 253 PEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAI-----IRGKIDFERD- 305
           PEV L+ +Y   +D+WS G I   +    P F   ++      I     + G+ D+ RD 
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 247
Query: 306 -------------PWPKVSKEAKELVKNM----LDPNPYNRLTLEEVLENPWIK 342
                        P  K   +  EL K++    L  NP  R++    L +P+ +
Sbjct: 248 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 131/283 (46%), Gaps = 24/283 (8%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           ELG G  G+  +     +G   A +K+   ++K  I  + + RE++++ H    P IV +
Sbjct: 32  ELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 88
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHR 206
             A+     I + ME  +GG L   +   G   E+    V   +++ +    E + +MHR
Sbjct: 89  YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 148
Query: 207 DLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPE 263
           D+KP N L    +   ++K  DFG+S  +       F   VG+  YM+PE L+  +Y  +
Sbjct: 149 DVKPSNILV---NSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQ 202
Query: 264 IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF-ERDPWPKV-----SKEAKEL 317
            D+WS G+ +  +  G  P  +    G     I   +D+   +P PK+     S E ++ 
Sbjct: 203 SDIWSMGLSLVEMAVGRYPIGS----GSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDF 258
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           V   L  NP  R  L++++ + +IK  + A  V   G + S I
Sbjct: 259 VNKCLIKNPAERADLKQLMVHAFIKRSD-AEEVDFAGWLCSTI 300

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 19/229 (8%)
Query: 69  SVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDV 128
           S V  P + ++  +Y   K +G+G FG   + ++ +  +  A K +  EK       +++
Sbjct: 86  SYVQVPHD-HVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEI 144
Query: 129 RREVEIMRHLPKHP-----NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA 183
           R    I+ HL K       N++   E +  ++ I +  EL     L++ ++ K  +   +
Sbjct: 145 R----ILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYE-LIKKNKFQGFS 198
Query: 184 AAAVGK---TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ 240
              V K   +IL+ +   H+N ++H DLKPEN L       S +K IDFG S +    ++
Sbjct: 199 LPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGR-SGIKVIDFGSSCY--EHQR 255
Query: 241 FCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
               + S +Y APEV L   YG  ID+WS G I+  LL G P    E E
Sbjct: 256 VYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 75.5 bits (184), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 19/229 (8%)
Query: 69  SVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDV 128
           S V  P + ++  +Y   K +G+G FG   + ++ +  +  A K +  EK       +++
Sbjct: 86  SYVQVPHD-HVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEI 144
Query: 129 RREVEIMRHLPKHP-----NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA 183
           R    I+ HL K       N++   E +  ++ I +  EL     L++ ++ K  +   +
Sbjct: 145 R----ILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYE-LIKKNKFQGFS 198
Query: 184 AAAVGK---TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ 240
              V K   +IL+ +   H+N ++H DLKPEN L       S +K IDFG S +    ++
Sbjct: 199 LPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGR-SGIKVIDFGSSCY--EHQR 255
Query: 241 FCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
               + S +Y APEV L   YG  ID+WS G I+  LL G P    E E
Sbjct: 256 VYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 75.5 bits (184), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           IL+ +  CH  G+MHRD+KP N +     E+ +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
             PE+L   + Y   +D+WS G ++  ++    PF+      ++ +  A + G       
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
             K + E DP             W +         VS EA + +  +L  +  +RLT  E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 335 VLENPWI 341
            +E+P+ 
Sbjct: 318 AMEHPYF 324

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 75.5 bits (184), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           IL+ +  CH  G+MHRD+KP N +     E+ +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
             PE+L   + Y   +D+WS G ++  ++    PF+      ++ +  A + G       
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
             K + E DP             W +         VS EA + +  +L  +  +RLT  E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 335 VLENPWI 341
            +E+P+ 
Sbjct: 318 AMEHPYF 324

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           IL+ +  CH  G+MHRD+KP N +     E+ +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
             PE+L   + Y   +D+WS G ++  ++    PF+      ++ +  A + G       
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
             K + E DP             W +         VS EA + +  +L  +  +RLT  E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 335 VLENPWI 341
            +E+P+ 
Sbjct: 318 AMEHPYF 324

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 19/229 (8%)
Query: 69  SVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDV 128
           S V  P + ++  +Y   K +G+G FG   + ++ +  +  A K +  EK       +++
Sbjct: 86  SYVQVPHD-HVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEI 144
Query: 129 RREVEIMRHLPKHP-----NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA 183
           R    I+ HL K       N++   E +  ++ I +  EL     L++ ++ K  +   +
Sbjct: 145 R----ILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYE-LIKKNKFQGFS 198
Query: 184 AAAVGK---TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ 240
              V K   +IL+ +   H+N ++H DLKPEN L       S +K IDFG S +    ++
Sbjct: 199 LPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGR-SGIKVIDFGSSCY--EHQR 255
Query: 241 FCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
               + S +Y APEV L   YG  ID+WS G I+  LL G P    E E
Sbjct: 256 VYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           IL+ +  CH  G+MHRD+KP N +     E+ +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
             PE+L   + Y   +D+WS G ++  ++    PF+      ++ +  A + G       
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
             K + E DP             W +         VS EA + +  +L  +  +RLT  E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 335 VLENPWI 341
            +E+P+ 
Sbjct: 318 AMEHPYF 324

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           IL+ +  CH  G+MHRD+KP N +     E+ +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
             PE+L   + Y   +D+WS G ++  ++    PF+      ++ +  A + G       
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
             K + E DP             W +         VS EA + +  +L  +  +RLT  E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 335 VLENPWI 341
            +E+P+ 
Sbjct: 318 AMEHPYF 324

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           IL+ +  CH  G+MHRD+KP N +     E+ +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
             PE+L   + Y   +D+WS G ++  ++    PF+      ++ +  A + G       
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
             K + E DP             W +         VS EA + +  +L  +  +RLT  E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 335 VLENPWI 341
            +E+P+ 
Sbjct: 318 AMEHPYF 324

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           IL+ +  CH  G+MHRD+KP N +     E+ +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
             PE+L   + Y   +D+WS G ++  ++    PF+      ++ +  A + G       
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
             K + E DP             W +         VS EA + +  +L  +  +RLT  E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 335 VLENPWI 341
            +E+P+ 
Sbjct: 318 AMEHPYF 324

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           IL+ +  CH  G+MHRD+KP N +     E+ +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 139 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 196
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
             PE+L   + Y   +D+WS G ++  ++    PF+      ++ +  A + G       
Sbjct: 197 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 256
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
             K + E DP             W +         VS EA + +  +L  +  +RLT  E
Sbjct: 257 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 316
Query: 335 VLENPWI 341
            +E+P+ 
Sbjct: 317 AMEHPYF 323

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 75.5 bits (184), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 138/329 (41%), Gaps = 53/329 (16%)
Query: 58  VDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKE 117
           + K  +  Q  SV    +   +L +Y   K +G G  GI    ++       A KK+++ 
Sbjct: 1   MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 60
Query: 118 KLKTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFD 171
             + +       RE+ +M+ +  H NI+      T ++  E+   +YLVMEL +      
Sbjct: 61  -FQNQTHAKRAYRELVLMKXV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LC 116
Query: 172 RIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL 231
           +++      ER +  + + +  I K  H  G++HRDLKP N +      +  LK +DFGL
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGL 172
Query: 232 SIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII----------------- 273
           +            V + YY APEV L   Y   +D+WS G I+                 
Sbjct: 173 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 274 ----YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SK 312
                I   G P P + +  +      +  +  +    +PK+                + 
Sbjct: 233 QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 292
Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           +A++L+  ML  +P  R+++++ L++P+I
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 29/269 (10%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKI-----AKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           ELGRG +G+  +   + +G+  A K+I     ++E+ +  +D+D   R V+        P
Sbjct: 14  ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC-------P 66
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGH-YTERAAAAVGKTILRIVKVCH 199
             VT+  A   +  +++ MEL +    + + ++++KG    E     +  +I++ ++  H
Sbjct: 67  FTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 126
Query: 200 EN-GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-----KPGEQFCEIVGSPYYMAP 253
               V+HRD+KP N L    +   Q+K  DFG+S +      K  +  C+   +P  + P
Sbjct: 127 SKLSVIHRDVKPSNVLI---NALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINP 183
Query: 254 EVLRRNYGPEIDVWSAGVIIYILLCGVPPF--WAETEEGIAHAIIRGKIDFERDPWPKVS 311
           E+ ++ Y  + D+WS G+ +  L     P+  W    + +   +         D   K S
Sbjct: 184 ELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD---KFS 240
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPW 340
            E  +     L  N   R T  E++++P+
Sbjct: 241 AEFVDFTSQCLKKNSKERPTYPELMQHPF 269

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           IL+ +  CH  G+MHRD+KP N +     E+ +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
             PE+L   + Y   +D+WS G ++  ++    PF+      ++ +  A + G       
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
             K + E DP             W +         VS EA + +  +L  +  +RLT  E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 335 VLENPWI 341
            +E+P+ 
Sbjct: 318 AMEHPYF 324

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           IL+ +  CH  G+MHRD+KP N +     E+ +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 139 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 196
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
             PE+L   + Y   +D+WS G ++  ++    PF+      ++ +  A + G       
Sbjct: 197 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 256
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
             K + E DP             W +         VS EA + +  +L  +  +RLT  E
Sbjct: 257 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 316
Query: 335 VLENPWI 341
            +E+P+ 
Sbjct: 317 AMEHPYF 323

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           IL+ +  CH  G+MHRD+KP N +     E+ +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 138 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 195
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
             PE+L   + Y   +D+WS G ++  ++    PF+      ++ +  A + G       
Sbjct: 196 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 255
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
             K + E DP             W +         VS EA + +  +L  +  +RLT  E
Sbjct: 256 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 315
Query: 335 VLENPWI 341
            +E+P+ 
Sbjct: 316 AMEHPYF 322

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 139/329 (42%), Gaps = 53/329 (16%)
Query: 58  VDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKE 117
           + K  +  Q  SV    +   +L +Y   K +G G  GI    ++       A KK+++ 
Sbjct: 1   MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR- 59
Query: 118 KLKTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFD 171
             + +       RE+ +M+ +  H NI+      T ++  E+   +YLVMEL +      
Sbjct: 60  PFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LX 116
Query: 172 RIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL 231
           +++      ER +  + + +L  +K  H  G++HRDLKP N +      +  LK +DFGL
Sbjct: 117 QVIQMELDHERMSYLLYQ-MLXGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGL 172
Query: 232 SIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII----------------- 273
           +            V + YY APEV L   Y   +D+WS G I+                 
Sbjct: 173 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 274 ----YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SK 312
                I   G P P + +  +      +  +  +    +PK+                + 
Sbjct: 233 QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 292
Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           +A++L+  ML  +P  R+++++ L++P+I
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 15/209 (7%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            +L +Y   K +G G  GI    ++       A KK+++   + +       RE+ +M+ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMK- 78
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
           +  H NI+      T +++ E+   +Y+VMEL +      +++      ER +  + + +
Sbjct: 79  VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           + I K  H  G++HRDLKP N +      ++ LK +DFGL+            V + YY 
Sbjct: 137 VGI-KHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 APEV-LRRNYGPEIDVWSAGVIIYILLCG 279
           APEV L   Y   +D+WS GVI+  ++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           IL+ +  CH  G+MHRD+KP N +     E+ +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 197
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
             PE+L   + Y   +D+WS G ++  ++    PF+      ++ +  A + G       
Sbjct: 198 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 257
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
             K + E DP             W +         VS EA + +  +L  +  +RLT  E
Sbjct: 258 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 317
Query: 335 VLENPWI 341
            +E+P+ 
Sbjct: 318 AMEHPYF 324

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           IL+ +  CH  G+MHRD+KP N +     E+ +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 145 ILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF 202
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRG------- 298
             PE+L   + Y   +D+WS G ++  ++    PF+      ++ +  A + G       
Sbjct: 203 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 262
Query: 299 --KIDFERDP-------------WPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
             K + E DP             W +         VS EA + +  +L  +  +RLT  E
Sbjct: 263 IDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 322
Query: 335 VLENPWI 341
            +E+P+ 
Sbjct: 323 AMEHPYF 329

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            +L +Y   K +G G  GI    ++       A KK+++   + +       RE+ +M+ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMK- 78
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
           +  H NI+      T +++ E+   +Y+VMEL +      +++      ER +  + + +
Sbjct: 79  VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           + I K  H  G++HRDLKP N +      ++ LK +DFGL+            V + YY 
Sbjct: 137 VGI-KHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 APEV-LRRNYGPEIDVWSAGVII 273
           APEV L   Y   +D+WS GVI+
Sbjct: 193 APEVILGMGYKENVDIWSVGVIM 215

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 124/284 (43%), Gaps = 37/284 (13%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           LGRG FG  H+  + +TG   A KK+  E  + E        E+     L   P IV   
Sbjct: 82  LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE--------ELMACAGL-TSPRIVPLY 132
Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGHYTE-RAAAAVGKTILRIVKVCHENGVMHRD 207
            A  +   + + MEL EGG L   +  +G   E RA   +G+  L  ++  H   ++H D
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQA-LEGLEYLHSRRILHGD 191
Query: 208 LKPENFLFADGSENSQLKAIDFGLSIFFKP---GEQFCE---IVGSPYYMAPE-VLRRNY 260
           +K +N L +  S+ S     DFG ++  +P   G+       I G+  +MAPE VL R+ 
Sbjct: 192 VKADNVLLS--SDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSC 249
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
             ++DVWS+  ++  +L G  P W +   G     I  +    R+  P  +    + ++ 
Sbjct: 250 DAKVDVWSSCCMMLHMLNGCHP-WTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQE 308
Query: 321 MLDPNPYNRLTLEEV-------------LENPW---IKNDNHAP 348
            L   P +R++  E+             L++PW    K   H P
Sbjct: 309 GLRKEPIHRVSAAELGGKVNRALQQVGGLKSPWRGEYKEPRHPP 352

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 129/304 (42%), Gaps = 46/304 (15%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP-- 139
           +Y    E+G G +G  ++  +  +G   A K +     +  + I  VR EV ++R L   
Sbjct: 5   RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRLEAF 63
Query: 140 KHPNIVTYKE----AYEDKDA-IYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTIL 192
           +HPN+V   +    +  D++  + LV E  +       D+    G   E     + +  L
Sbjct: 64  EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMRQFL 122
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
           R +   H N ++HRDLKPEN L   G     +K  DFGL+  +        +V + +Y A
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALAPVVVTLWYRA 179
Query: 253 PEV-LRRNYGPEIDVWSAGVIIY------ILLC---------------GVPPFWAETEEG 290
           PEV L+  Y   +D+WS G I         L C               G+PP   E +  
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP---EDDWP 236
Query: 291 IAHAIIRGKIDFERDP------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
              ++ RG     R P       P++ +   +L+  ML  NP+ R++    L++ ++  D
Sbjct: 237 RDVSLPRGAFP-PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 295
Query: 345 NHAP 348
              P
Sbjct: 296 EGNP 299

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 137/327 (41%), Gaps = 53/327 (16%)
Query: 60  KKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL 119
           K  +  Q  SV    +   +L +Y   K +G G  GI    ++       A KK+++   
Sbjct: 4   KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PF 62
Query: 120 KTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRI 173
           + +       RE+ +M+ +  H NI+      T ++  E+   +YLVMEL +      ++
Sbjct: 63  QNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQV 119
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI 233
           +      ER +  + + +  I K  H  G++HRDLKP N +      +  LK +DFGL+ 
Sbjct: 120 IQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR 175
Query: 234 FFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII------------------- 273
                      V + YY APEV L   Y   +D+WS G I+                   
Sbjct: 176 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 235
Query: 274 --YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SKEA 314
              I   G P P + +  +      +  +  +    +PK+                + +A
Sbjct: 236 NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQA 295
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWI 341
           ++L+  ML  +P  R+++++ L++P+I
Sbjct: 296 RDLLSKMLVIDPAKRISVDDALQHPYI 322

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 126/287 (43%), Gaps = 47/287 (16%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKI--AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           LG+G FG   +         YA KKI   +EKL T      +  EV ++  L  H  +V 
Sbjct: 14  LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST------ILSEVMLLASL-NHQYVVR 66
Query: 147 YKEAY-------------EDKDAIYLVMELCEGGELFDRIVNKGHYTER-AAAAVGKTIL 192
           Y  A+             + K  +++ ME CE   L+D I ++    +R     + + IL
Sbjct: 67  YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-------------PG- 238
             +   H  G++HRDLKP N +F D S N  +K  DFGL+                 PG 
Sbjct: 127 EALSYIHSQGIIHRDLKPMN-IFIDESRN--VKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 239 -EQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHA 294
            +     +G+  Y+A EVL    +Y  +ID++S G+I + ++    PF    E   I   
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKK 240
Query: 295 IIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           +    I+F  D      K  K++++ ++D +P  R     +L + W+
Sbjct: 241 LRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 136/321 (42%), Gaps = 53/321 (16%)
Query: 66  QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI 125
           Q  SV    +   +L +Y   K +G G  GI    ++       A KK+++   + +   
Sbjct: 2   QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 60
Query: 126 DDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY 179
               RE+ +M+ +  H NI+      T ++  E+   +YLVMEL +      +++     
Sbjct: 61  KRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELD 117
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
            ER +  + + +L  +K  H  G++HRDLKP N +      +  LK +DFGL+       
Sbjct: 118 HERMSYLLYQ-MLXGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLARTAGTSF 173
Query: 240 QFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII---------------------YILL 277
                V + YY APEV L   Y   +D+WS G I+                      I  
Sbjct: 174 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
Query: 278 CGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SKEAKELVKN 320
            G P P + +  +      +  +  +    +PK+                + +A++L+  
Sbjct: 234 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSK 293
Query: 321 MLDPNPYNRLTLEEVLENPWI 341
           ML  +P  R+++++ L++P+I
Sbjct: 294 MLVIDPAKRISVDDALQHPYI 314

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 137/327 (41%), Gaps = 53/327 (16%)
Query: 60  KKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL 119
           K  +  Q  SV    +   +L +Y   K +G G  GI    ++       A KK+++   
Sbjct: 4   KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PF 62
Query: 120 KTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRI 173
           + +       RE+ +M+ +  H NI+      T ++  E+   +YLVMEL +      ++
Sbjct: 63  QNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQV 119
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI 233
           +      ER +  + + +  I K  H  G++HRDLKP N +      +  LK +DFGL+ 
Sbjct: 120 IQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR 175
Query: 234 FFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII------------------- 273
                      V + YY APEV L   Y   +D+WS G I+                   
Sbjct: 176 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 235
Query: 274 --YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SKEA 314
              I   G P P + +  +      +  +  +    +PK+                + +A
Sbjct: 236 NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQA 295
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWI 341
           ++L+  ML  +P  R+++++ L++P+I
Sbjct: 296 RDLLSKMLVIDPAKRISVDDALQHPYI 322

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           T G+ +G G FG  ++      G+ +     K+      T   +   + EV ++R   +H
Sbjct: 27  TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-RH 79
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
            NI+ +   Y     + +V + CEG  L+  +  ++  +  +    + +   R +   H 
Sbjct: 80  VNILLFM-GYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSI---FFKPGEQFCEIVGSPYYMAPEVLR 257
             ++HRDLK  N       E++ +K  DFGL+     +    QF ++ GS  +MAPEV+R
Sbjct: 139 KSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
                 Y  + DV++ G+++Y L+ G  P+
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 137/327 (41%), Gaps = 53/327 (16%)
Query: 60  KKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL 119
           K  +  Q  SV    +   +L +Y   K +G G  GI    ++       A KK+++   
Sbjct: 3   KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PF 61
Query: 120 KTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRI 173
           + +       RE+ +M+ +  H NI+      T ++  E+   +YLVMEL +      ++
Sbjct: 62  QNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQV 118
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI 233
           +      ER +  + + +  I K  H  G++HRDLKP N +      +  LK +DFGL+ 
Sbjct: 119 IQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR 174
Query: 234 FFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII------------------- 273
                      V + YY APEV L   Y   +D+WS G I+                   
Sbjct: 175 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 234
Query: 274 --YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SKEA 314
              I   G P P + +  +      +  +  +    +PK+                + +A
Sbjct: 235 NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQA 294
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWI 341
           ++L+  ML  +P  R+++++ L++P+I
Sbjct: 295 RDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/329 (23%), Positives = 138/329 (41%), Gaps = 53/329 (16%)
Query: 58  VDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKE 117
           + K  +  Q  SV    +   +L +Y   K +G G  GI    ++       A KK+++ 
Sbjct: 1   MSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR- 59
Query: 118 KLKTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFD 171
             + +       RE+ +M+ +  H NI+      T ++  E+   +YLVMEL +      
Sbjct: 60  PFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LC 116
Query: 172 RIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL 231
           +++      ER +  + + +  I K  H  G++HRDLKP N +      +  LK +DFGL
Sbjct: 117 QVIQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL 172
Query: 232 SIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII----------------- 273
           +            V + YY APEV L   Y   +D+WS G I+                 
Sbjct: 173 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 232
Query: 274 ----YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SK 312
                I   G P P + +  +      +  +  +    +PK+                + 
Sbjct: 233 QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 292
Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           +A++L+  ML  +P  R+++++ L++P+I
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 137/327 (41%), Gaps = 53/327 (16%)
Query: 60  KKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL 119
           K  +  Q  SV    +   +L +Y   K +G G  GI    ++       A KK+++   
Sbjct: 2   KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PF 60
Query: 120 KTEIDIDDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRI 173
           + +       RE+ +M+ +  H NI+      T ++  E+   +YLVMEL +      ++
Sbjct: 61  QNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQV 117
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI 233
           +      ER +  + + +  I K  H  G++HRDLKP N +      +  LK +DFGL+ 
Sbjct: 118 IQMELDHERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLAR 173
Query: 234 FFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII------------------- 273
                      V + YY APEV L   Y   +D+WS G I+                   
Sbjct: 174 TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 233
Query: 274 --YILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SKEA 314
              I   G P P + +  +      +  +  +    +PK+                + +A
Sbjct: 234 NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQA 293
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWI 341
           ++L+  ML  +P  R+++++ L++P+I
Sbjct: 294 RDLLSKMLVIDPAKRISVDDALQHPYI 320

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 99/228 (43%), Gaps = 38/228 (16%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D Y     +GRG +G  +  ++  T +  A KK+ +   +  ID   + RE+ I+  L  
Sbjct: 26  DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNR-MFEDLIDCKRILREITILNRLKS 84
Query: 141 HPNIVTYKEAYEDK----DAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRI 194
              I  Y     D     D +Y+V+E+ +    +LF   +     TE     +   +L  
Sbjct: 85  DYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPI---FLTEEHIKTILYNLLLG 141
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF----------------KPG 238
               HE+G++HRDLKP N L    +++  +K  DFGL+                   +PG
Sbjct: 142 ENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 239 -------EQFCEIVGSPYYMAPE--VLRRNYGPEIDVWSAGVIIYILL 277
                  +Q    V + +Y APE  +L+ NY   ID+WS G I   LL
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 132/274 (48%), Gaps = 21/274 (7%)
Query: 76  EGNILDK---YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
           + NI D    +T  + +G+G FG   +  +  T +  A K I  +  + E +I+D+++E+
Sbjct: 15  QNNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKII--DLEEAEDEIEDIQQEI 72
Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
            ++        +  Y  +Y     ++++ME   GG   D ++  G + E   A + K IL
Sbjct: 73  TVLSQC-DSSYVTKYYGSYLKGSKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEIL 130
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCEIVGSPYYM 251
           + +   H    +HRD+K  N L    SE   +K  DFG++      + +    VG+P++M
Sbjct: 131 KGLDYLHSEKKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWM 187
Query: 252 APEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APEV++++ Y  + D+WS G+    L  G PP          H +    +  + +P   V
Sbjct: 188 APEVIQQSAYDSKADIWSLGITAIELAKGEPP------NSDMHPMRVLFLIPKNNPPTLV 241
Query: 311 ---SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
              +K  KE +   L+ +P  R T +E+L++ +I
Sbjct: 242 GDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFI 275

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           +L+ +  CH  G+MHRD+KP N +     E  +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 155 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 212
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
             PE+L   ++Y   +D+WS G +   ++    PF+   +              +G+   
Sbjct: 213 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAY 272
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
           + + +I+ +           R PW K         VS EA + +  +L  +   RLT  E
Sbjct: 273 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 332
Query: 335 VLENPWIKNDNHAPN 349
            + +P+ +    A N
Sbjct: 333 AMTHPYFQQVRAAEN 347

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 134/330 (40%), Gaps = 71/330 (21%)
Query: 77  GNILD-KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           G++L  +Y     LG G FG   +C + + G  +   KI K     +   +  R E++++
Sbjct: 9   GDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVK---NVDRYCEAARSEIQVL 65
Query: 136 RHL-PKHPN----IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA--AAAVG 188
            HL    PN     V   E +E    I +V EL  G   +D I   G    R      + 
Sbjct: 66  EHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMA 124
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLF--ADGSE--------------NSQLKAIDFGLS 232
             I + V   H N + H DLKPEN LF  +D +E              N  +K +DFG +
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184
Query: 233 IFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPF-WAETEEG 290
            +    E    +V + +Y APEV L   +    DVWS G I+     G   F   +++E 
Sbjct: 185 TY--DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242
Query: 291 IA-----------HAIIRGK----IDFERDPWPK-------VSKEAK------------- 315
           +A           H I + +       +R  W +       VS+  K             
Sbjct: 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEH 302
Query: 316 ----ELVKNMLDPNPYNRLTLEEVLENPWI 341
               +L++ ML+ +P  R+TL E L++P+ 
Sbjct: 303 ERLFDLIQKMLEYDPAKRITLREALKHPFF 332

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 129/304 (42%), Gaps = 46/304 (15%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP-- 139
           +Y    E+G G +G  ++  +  +G   A K +     +  + I  VR EV ++R L   
Sbjct: 5   RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRLEAF 63
Query: 140 KHPNIVTYKE----AYEDKDA-IYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTIL 192
           +HPN+V   +    +  D++  + LV E  +       D+    G   E     + +  L
Sbjct: 64  EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMRQFL 122
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
           R +   H N ++HRDLKPEN L   G     +K  DFGL+  +        +V + +Y A
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALFPVVVTLWYRA 179
Query: 253 PEV-LRRNYGPEIDVWSAGVIIY------ILLC---------------GVPPFWAETEEG 290
           PEV L+  Y   +D+WS G I         L C               G+PP   E +  
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP---EDDWP 236
Query: 291 IAHAIIRGKIDFERDP------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
              ++ RG     R P       P++ +   +L+  ML  NP+ R++    L++ ++  D
Sbjct: 237 RDVSLPRGAFP-PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 295
Query: 345 NHAP 348
              P
Sbjct: 296 EGNP 299

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 128/283 (45%), Gaps = 28/283 (9%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           ELG G  G+  +     +G   A +K+   ++K  I  + + RE++++ H    P IV +
Sbjct: 16  ELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 72
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHR 206
             A+     I + ME  +GG L   +   G   E+    V   +++ +    E + +MHR
Sbjct: 73  YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 132
Query: 207 DLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEID 265
           D+KP N L    +   ++K  DFG+S      E   E VG+  YM+PE L+  +Y  + D
Sbjct: 133 DVKPSNILV---NSRGEIKLCDFGVSGQLI-DEMANEFVGTRSYMSPERLQGTHYSVQSD 188
Query: 266 VWSAGVIIYILLCG---VPPFWAETEEGIAHAIIRGKIDFERDPWPKV-----SKEAKEL 317
           +WS G+ +  +  G    PP           AI         +P PK+     S E ++ 
Sbjct: 189 IWSMGLSLVEMAVGRYPRPPM----------AIFELLDYIVNEPPPKLPSAVFSLEFQDF 238
Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRI 360
           V   L  NP  R  L++++ + +IK  + A  V   G + S I
Sbjct: 239 VNKCLIKNPAERADLKQLMVHAFIKRSD-AEEVDFAGWLCSTI 280

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           +L+ +  CH  G+MHRD+KP N +     E  +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 135 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 192
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
             PE+L   ++Y   +D+WS G +   ++    PF+   +              +G+   
Sbjct: 193 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 252
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
           + + +I+ +           R PW K         VS EA + +  +L  +   RLT  E
Sbjct: 253 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 312
Query: 335 VLENPWIKNDNHAPN 349
            + +P+ +    A N
Sbjct: 313 AMTHPYFQQVRAAEN 327

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           +L+ +  CH  G+MHRD+KP N +     E  +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
             PE+L   ++Y   +D+WS G +   ++    PF+   +              +G+   
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
           + + +I+ +           R PW K         VS EA + +  +L  +   RLT  E
Sbjct: 252 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 335 VLENPWIKNDNHAPN 349
            + +P+ +    A N
Sbjct: 312 AMTHPYFQQVRAAEN 326

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           LG+G      +    +TG+ +A K          +D+    RE E+++ L  H NIV   
Sbjct: 17  LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKL-NHKNIVKLF 73
Query: 149 EAYEDKDAIY--LVMELCEGGELFDRI---VNKGHYTERAAAAVGKTILRIVKVCHENGV 203
              E+    +  L+ME C  G L+  +    N     E     V + ++  +    ENG+
Sbjct: 74  AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 204 MHRDLKPENFLFADGSE-NSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-----VLR 257
           +HR++KP N +   G +  S  K  DFG +   +  EQF  + G+  Y+ P+     VLR
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLR 193
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
           ++    YG  +D+WS GV  Y    G  PF
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPF 223

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           +L+ +  CH  G+MHRD+KP N +     E  +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 135 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 192
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
             PE+L   ++Y   +D+WS G +   ++    PF+   +              +G+   
Sbjct: 193 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 252
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
           + + +I+ +           R PW K         VS EA + +  +L  +   RLT  E
Sbjct: 253 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 312
Query: 335 VLENPWIKNDNHAPN 349
            + +P+ +    A N
Sbjct: 313 AMTHPYFQQVRAAEN 327

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           +L+ +  CH  G+MHRD+KP N +     E  +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 136 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 193
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
             PE+L   ++Y   +D+WS G +   ++    PF+   +              +G+   
Sbjct: 194 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 253
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
           + + +I+ +           R PW K         VS EA + +  +L  +   RLT  E
Sbjct: 254 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 313
Query: 335 VLENPWIKNDNHAPN 349
            + +P+ +    A N
Sbjct: 314 AMTHPYFQQVRAAEN 328

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           LG+G      +    +TG+ +A K          +D+    RE E+++ L  H NIV   
Sbjct: 17  LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKL-NHKNIVKLF 73
Query: 149 EAYEDKDAIY--LVMELCEGGELFDRI---VNKGHYTERAAAAVGKTILRIVKVCHENGV 203
              E+    +  L+ME C  G L+  +    N     E     V + ++  +    ENG+
Sbjct: 74  AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 204 MHRDLKPENFLFADGSE-NSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE-----VLR 257
           +HR++KP N +   G +  S  K  DFG +   +  EQF  + G+  Y+ P+     VLR
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLR 193
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
           ++    YG  +D+WS GV  Y    G  PF
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPF 223

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 135/321 (42%), Gaps = 53/321 (16%)
Query: 66  QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI 125
           Q  SV    +   +L +Y   K +G G  GI    ++       A KK+++   + +   
Sbjct: 3   QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 61
Query: 126 DDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY 179
               RE+ +M+ +  H NI+      T ++  E+   +YLVMEL +      +++     
Sbjct: 62  KRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELD 118
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
            ER +  + + +  I K  H  G++HRDLKP N +      +  LK +DFGL+       
Sbjct: 119 HERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSF 174
Query: 240 QFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII---------------------YILL 277
                V + YY APEV L   Y   +D+WS G I+                      I  
Sbjct: 175 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
Query: 278 CGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SKEAKELVKN 320
            G P P + +  +      +  +  +    +PK+                + +A++L+  
Sbjct: 235 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSK 294
Query: 321 MLDPNPYNRLTLEEVLENPWI 341
           ML  +P  R+++++ L++P+I
Sbjct: 295 MLVIDPAKRISVDDALQHPYI 315

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 127/300 (42%), Gaps = 38/300 (12%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP-- 139
           +Y    E+G G +G  ++  +  +G   A K +     +  + I  VR EV ++R L   
Sbjct: 5   RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVR-EVALLRRLEAF 63
Query: 140 KHPNIVTYKE----AYEDKDA-IYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTIL 192
           +HPN+V   +    +  D++  + LV E  +       D+    G   E     + +  L
Sbjct: 64  EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMRQFL 122
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
           R +   H N ++HRDLKPEN L   G     +K  DFGL+  +        +V + +Y A
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALDPVVVTLWYRA 179
Query: 253 PEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAI-----IRGKIDFERD- 305
           PEV L+  Y   +D+WS G I   +    P F   +E      I     +  + D+ RD 
Sbjct: 180 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDV 239
Query: 306 -----------------PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
                              P++ +   +L+  ML  NP+ R++    L++ ++  D   P
Sbjct: 240 SLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNP 299

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 135/321 (42%), Gaps = 53/321 (16%)
Query: 66  QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI 125
           Q  SV    +   +L +Y   K +G G  GI    ++       A KK+++   + +   
Sbjct: 3   QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 61
Query: 126 DDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY 179
               RE+ +M+ +  H NI+      T ++  E+   +YLVMEL +      +++     
Sbjct: 62  KRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELD 118
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
            ER +  + + +  I K  H  G++HRDLKP N +      +  LK +DFGL+       
Sbjct: 119 HERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSF 174
Query: 240 QFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII---------------------YILL 277
                V + YY APEV L   Y   +D+WS G I+                      I  
Sbjct: 175 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
Query: 278 CGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SKEAKELVKN 320
            G P P + +  +      +  +  +    +PK+                + +A++L+  
Sbjct: 235 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSK 294
Query: 321 MLDPNPYNRLTLEEVLENPWI 341
           ML  +P  R+++++ L++P+I
Sbjct: 295 MLVIDPAKRISVDDALQHPYI 315

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 34/273 (12%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           LGRG FG  H+  + +TG   A KK+  E  + E        E+     L   P IV   
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE--------ELMACAGL-TSPRIVPLY 151
Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGHYTE-RAAAAVGKTILRIVKVCHENGVMHRD 207
            A  +   + + MEL EGG L   +  +G   E RA   +G+  L  ++  H   ++H D
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQA-LEGLEYLHSRRILHGD 210
Query: 208 LKPENFLFADGSENSQLKAIDFGLSIFFKP---GEQFCE---IVGSPYYMAPE-VLRRNY 260
           +K +N L +  S+ S     DFG ++  +P   G+       I G+  +MAPE VL R+ 
Sbjct: 211 VKADNVLLS--SDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSC 268
Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
             ++DVWS+  ++  +L G  P W +   G     I  +    R+  P  +    + ++ 
Sbjct: 269 DAKVDVWSSCCMMLHMLNGCHP-WTQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQE 327
Query: 321 MLDPNPYNRLTLEEV-------------LENPW 340
            L   P +R++  E+             L++PW
Sbjct: 328 GLRKEPIHRVSAAELGGKVNRALQQVGGLKSPW 360

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           +L+ +  CH  G+MHRD+KP N +     E  +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
             PE+L   ++Y   +D+WS G +   ++    PF+   +              +G+   
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
           + + +I+ +           R PW K         VS EA + +  +L  +   RLT  E
Sbjct: 252 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 335 VLENPWIKNDNHAPN 349
            + +P+ +    A N
Sbjct: 312 AMTHPYFQQVRAAEN 326

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           +L+ +  CH  G+MHRD+KP N +     E  +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
             PE+L   ++Y   +D+WS G +   ++    PF+   +              +G+   
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
           + + +I+ +           R PW K         VS EA + +  +L  +   RLT  E
Sbjct: 252 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 335 VLENPWIKNDNHAPN 349
            + +P+ +    A N
Sbjct: 312 AMTHPYFQQVRAAEN 326

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 135/321 (42%), Gaps = 53/321 (16%)
Query: 66  QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI 125
           Q  SV    +   +L +Y   K +G G  GI    ++       A KK+++   + +   
Sbjct: 2   QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHA 60
Query: 126 DDVRREVEIMRHLPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY 179
               RE+ +M+ +  H NI+      T ++  E+   +YLVMEL +      +++     
Sbjct: 61  KRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELD 117
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
            ER +  + + +  I K  H  G++HRDLKP N +      +  LK +DFGL+       
Sbjct: 118 HERMSYLLYQMLCGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSF 173
Query: 240 QFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVII---------------------YILL 277
                V + YY APEV L   Y   +D+WS G I+                      I  
Sbjct: 174 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
Query: 278 CGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKV----------------SKEAKELVKN 320
            G P P + +  +      +  +  +    +PK+                + +A++L+  
Sbjct: 234 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSK 293
Query: 321 MLDPNPYNRLTLEEVLENPWI 341
           ML  +P  R+++++ L++P+I
Sbjct: 294 MLVIDPAKRISVDDALQHPYI 314

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           +L+ +  CH  G+MHRD+KP N +     E  +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
             PE+L   ++Y   +D+WS G +   ++    PF+   +              +G+   
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
           + + +I+ +           R PW K         VS EA + +  +L  +   RLT  E
Sbjct: 252 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 335 VLENPWIKNDNHAPN 349
            + +P+ +    A N
Sbjct: 312 AMTHPYFQQVRAAEN 326

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 91/195 (46%), Gaps = 38/195 (19%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           +L+ +  CH  G+MHRD+KP N +     E  +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
             PE+L   ++Y   +D+WS G +   ++    PF+   +              +G+   
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
           + + +I+ +           R PW K         VS EA + +  +L  +   RLT  E
Sbjct: 252 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 335 VLENPWIKNDNHAPN 349
            + +P+ +    A N
Sbjct: 312 AMTHPYFQQVRAAEN 326

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 72.4 bits (176), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            +L +Y   K +G G  GI    ++       A KK+++   + +       RE+ +M+ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMK- 78
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
           +  H NI+      T +++ E+   +Y+VMEL +      +++      ER +  + + +
Sbjct: 79  VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           + I K  H  G++HRDLKP N +      ++ LK +DFGL+            V + YY 
Sbjct: 137 VGI-KHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 APEV-LRRNYGPEIDVWSAGVII 273
           APEV L   Y   +D+WS G I+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIM 215

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 125/290 (43%), Gaps = 44/290 (15%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV--- 145
           +G G +G      +  TG   A KK+ +   ++E+      RE+ +++H+ +H N++   
Sbjct: 33  VGSGAYGAVCSAVDGRTGAKVAIKKLYR-PFQSELFAKRAYRELRLLKHM-RHENVIGLL 90
Query: 146 ---TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
              T  E  +D    YLVM     G    +++      E     +   +L+ ++  H  G
Sbjct: 91  DVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG 148
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR--NY 260
           ++HRDLKP N      +E+ +LK +DFGL+   +   +    V + +Y APEV+     Y
Sbjct: 149 IIHRDLKPGNLAV---NEDCELKILDFGLA--RQADSEMXGXVVTRWYRAPEVILNWMRY 203
Query: 261 GPEIDVWSAGVIIYILL---------------------CGVPP--FWAETEEGIAHAIIR 297
              +D+WS G I+  ++                      G PP  F    +   A   ++
Sbjct: 204 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK 263
Query: 298 GKIDFERDPWPKVSKEAKELVKNMLDP----NPYNRLTLEEVLENPWIKN 343
           G  + E+  +  +   A  L  N+L+     +   R+T  E L +P+ ++
Sbjct: 264 GLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 313

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 143/347 (41%), Gaps = 86/347 (24%)
Query: 71  VSNPAEGNIL--------DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAK--EKLK 120
           V + AEG+++        ++Y     LG G FG   QC +   G      KI K  EK K
Sbjct: 15  VEDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYK 74
Query: 121 TEIDIDDVRREVEIMRHL----PKHPNI-VTYKEAYEDKDAIYLVMELCEGGELFDRIVN 175
                +  R E+ ++  +    P + N+ V   + ++    + +  EL  G   FD + +
Sbjct: 75  -----EAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELL-GLSTFDFLKD 128
Query: 176 KGH--YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS-------------- 219
             +  Y       +   + + VK  H+N + H DLKPEN LF +                
Sbjct: 129 NNYLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDER 188
Query: 220 --ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYIL 276
             +++ ++ +DFG + F    E    IV + +Y APEV L   +    DVWS G II+  
Sbjct: 189 SVKSTAVRVVDFGSATF--DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEY 246
Query: 277 LCGVPPFWAETEEGIAHAII-----------------------RGKIDFERD-------- 305
             G   F  +T +   H  +                       RG++D++ +        
Sbjct: 247 YVGFTLF--QTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVR 304
Query: 306 ----PWPK-VSKEAKE------LVKNMLDPNPYNRLTLEEVLENPWI 341
               P  + ++ EA+E      L+++ML+  P  RLTL E L++P+ 
Sbjct: 305 ENCKPLRRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFF 351

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 38/188 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           +L+ +  CH  G+MHRD+KP N +     E  +L+ ID+GL+ F+ PG+++   V S Y+
Sbjct: 134 LLKALDYCHSQGIMHRDVKPHNVMI--DHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF 191
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
             PE+L   ++Y   +D+WS G +   ++    PF+   +              +G+   
Sbjct: 192 KGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVY 251
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
           + + +I+ +           R PW K         VS EA + +  +L  +   RLT  E
Sbjct: 252 LNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALE 311
Query: 335 VLENPWIK 342
            + +P+ +
Sbjct: 312 AMTHPYFQ 319

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 138/353 (39%), Gaps = 98/353 (27%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D Y     +GRG +G  +  ++    +  A KK+ +   +  ID   + RE+ I+  L  
Sbjct: 28  DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNR-MFEDLIDCKRILREITILNRLKS 86
Query: 141 HPNI----VTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRI 194
              I    +   E     D +Y+V+E+ +    +LF   +     TE+    +   +L  
Sbjct: 87  DYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPI---FLTEQHVKTILYNLLLG 143
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-------------------IFF 235
            K  HE+G++HRDLKP N L    +++  +K  DFGL+                      
Sbjct: 144 EKFIHESGIIHRDLKPANCLL---NQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENE 200
Query: 236 KPG-------EQFCEIVGSPYYMAPE--VLRRNYGPEIDVWSAGVIIYILL--------- 277
           +PG       +Q    V + +Y APE  +L+ NY   ID+WS G I   LL         
Sbjct: 201 EPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINN 260
Query: 278 ----------------------------------------CGVPP---FWAETEEGIAHA 294
                                                    G PP       T++ +   
Sbjct: 261 PTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKY 320
Query: 295 I----IRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           I     R  ID  +  +  +SKE  +L+++ML  N   R+T+++ L +P++K+
Sbjct: 321 IKLFPTRDGIDLSKK-YSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKD 372

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 120/290 (41%), Gaps = 56/290 (19%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           +G G FG   +      G+TY  K++     K E       REV+ +  L  H NIV Y 
Sbjct: 19  IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE-------REVKALAKLD-HVNIVHYN 70
Query: 149 EAYEDKD----------------AIYLVMELCEGGELFDRI-VNKGHYTERAAA-AVGKT 190
             ++  D                 +++ ME C+ G L   I   +G   ++  A  + + 
Sbjct: 71  GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ 130
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           I + V   H   +++RDLKP N    D     Q+K  DFGL    K   +     G+  Y
Sbjct: 131 ITKGVDYIHSKKLINRDLKPSNIFLVD---TKQVKIGDFGLVTSLKNDGKRXRSKGTLRY 187
Query: 251 MAPE-VLRRNYGPEIDVWSAGVIIYILL--CGVP----PFWAETEEGIAHAIIRGKIDFE 303
           M+PE +  ++YG E+D+++ G+I+  LL  C        F+ +  +GI   I        
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIF------- 240
Query: 304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI------KNDNHA 347
                   K+ K L++ +L   P +R    E+L    +      KN+ H 
Sbjct: 241 -------DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNERHT 283

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 133/330 (40%), Gaps = 71/330 (21%)
Query: 77  GNILD-KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           G++L  +Y     LG G FG   +C + + G  +   KI K     +   +  R E++++
Sbjct: 9   GDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVK---NVDRYCEAARSEIQVL 65
Query: 136 RHL-PKHPN----IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA--AAAVG 188
            HL    PN     V   E +E    I +V EL  G   +D I   G    R      + 
Sbjct: 66  EHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMA 124
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLF--ADGSE--------------NSQLKAIDFGLS 232
             I + V   H N + H DLKPEN LF  +D +E              N  +K +DFG +
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184
Query: 233 IFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPF-WAETEEG 290
            +    E    +V   +Y APEV L   +    DVWS G I+     G   F   +++E 
Sbjct: 185 TY--DDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242
Query: 291 IA-----------HAIIRGK----IDFERDPWPK-------VSKEAK------------- 315
           +A           H I + +       +R  W +       VS+  K             
Sbjct: 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEH 302
Query: 316 ----ELVKNMLDPNPYNRLTLEEVLENPWI 341
               +L++ ML+ +P  R+TL E L++P+ 
Sbjct: 303 ERLFDLIQKMLEYDPAKRITLREALKHPFF 332

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           T G+ +G G FG  ++      G+ +     K+      T   +   + EV ++R   +H
Sbjct: 16  TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 68
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
            NI+ +   Y  K  + +V + CEG  L+  + + +  +       + +   + +   H 
Sbjct: 69  VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF---FKPGEQFCEIVGSPYYMAPEVLR 257
             ++HRDLK  N       E+  +K  DFGL+     +    QF ++ GS  +MAPEV+R
Sbjct: 128 KSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
                 Y  + DV++ G+++Y L+ G  P+
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            +L +Y   K +G G  GI    ++       A KK+++   + +       RE+ +M+ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMK- 78
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
           +  H NI+      T +++ E+   +Y+VMEL +      +++      ER +  + + +
Sbjct: 79  VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
             I K  H  G++HRDLKP N +      ++ LK +DFGL+            V + YY 
Sbjct: 137 CGI-KHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 APEV-LRRNYGPEIDVWSAGVII 273
           APEV L   Y   +D+WS G I+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIM 215

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           T G+ +G G FG  ++      G+ +     K+      T   +   + EV ++R   +H
Sbjct: 38  TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 90
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
            NI+ +   Y  K  + +V + CEG  L+  + + +  +       + +   + +   H 
Sbjct: 91  VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 149
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF---FKPGEQFCEIVGSPYYMAPEVLR 257
             ++HRDLK  N       E+  +K  DFGL+     +    QF ++ GS  +MAPEV+R
Sbjct: 150 KSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 206
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
                 Y  + DV++ G+++Y L+ G  P+
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           T G+ +G G FG  ++      G+ +     K+      T   +   + EV ++R   +H
Sbjct: 39  TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 91
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
            NI+ +   Y  K  + +V + CEG  L+  + + +  +       + +   + +   H 
Sbjct: 92  VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF---FKPGEQFCEIVGSPYYMAPEVLR 257
             ++HRDLK  N       E+  +K  DFGL+     +    QF ++ GS  +MAPEV+R
Sbjct: 151 KSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
                 Y  + DV++ G+++Y L+ G  P+
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           T G+ +G G FG  ++      G+ +     K+      T   +   + EV ++R   +H
Sbjct: 13  TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 65
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
            NI+ +   Y  K  + +V + CEG  L+  + + +  +       + +   + +   H 
Sbjct: 66  VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 124
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF---FKPGEQFCEIVGSPYYMAPEVLR 257
             ++HRDLK  N       E+  +K  DFGL+     +    QF ++ GS  +MAPEV+R
Sbjct: 125 KSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
                 Y  + DV++ G+++Y L+ G  P+
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            +L +Y   K +G G  GI    ++       A KK+++   + +       RE+ +M+ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 79
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
           +  H NI+      T +++ E+   +Y+VMEL +      +++      ER +  + + +
Sbjct: 80  V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
             I K  H  G++HRDLKP N +      ++ LK +DFGL+            V + YY 
Sbjct: 137 CGI-KHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 APEV-LRRNYGPEIDVWSAGVII 273
           APEV L   Y   +D+WS G I+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIM 215

>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory Domain (Cld) From Soybean Calcium-Dependent Protein Kinase- Alpha (Cdpk) Length = 87

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 30/75 (40%), Positives = 55/75 (73%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
           +A+ L ++++  +K++F M+DTD +G +TF+ELKDGL  +G ++ + ++K LM+AAD+D 
Sbjct: 13  MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDK 72
Query: 437 NGLLSCDEFVTMSVH 451
           +G +   EF+  +VH
Sbjct: 73  SGTIDYGEFIAATVH 87

>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 26/262 (9%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           +++G GEFG   +C +   G  YA K+ +K+ L   +D  +  REV     L +H ++V 
Sbjct: 13  EKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 71
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL----RIVKVCHENG 202
           Y  A+ + D + +  E C GG L D I            A  K +L    R ++  H   
Sbjct: 72  YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 131
Query: 203 VMHRDLKPENFLFADGS-ENSQLKAID----FGLSIFFKPGE-QFCEIVGSPY------- 249
           ++H D+KP N   +  S  N+  +  D        + FK G+      + SP        
Sbjct: 132 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSR 191
Query: 250 YMAPEVLRRNYG--PEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
           ++A EVL+ NY   P+ D+++  + + +   G  P     ++   H I +G++   R P 
Sbjct: 192 FLANEVLQENYTHLPKADIFALALTV-VXAAGAEPLPRNGDQW--HEIRQGRL--PRIP- 245
Query: 308 PKVSKEAKELVKNMLDPNPYNR 329
             +S+E  EL+K M+ P+P  R
Sbjct: 246 QVLSQEFTELLKVMIHPDPERR 267

>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 26/262 (9%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           +++G GEFG   +C +   G  YA K+ +K+ L   +D  +  REV     L +H ++V 
Sbjct: 15  EKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 73
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL----RIVKVCHENG 202
           Y  A+ + D + +  E C GG L D I            A  K +L    R ++  H   
Sbjct: 74  YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 133
Query: 203 VMHRDLKPENFLFADGS-ENSQLKAID----FGLSIFFKPGE-QFCEIVGSPY------- 249
           ++H D+KP N   +  S  N+  +  D        + FK G+      + SP        
Sbjct: 134 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSR 193
Query: 250 YMAPEVLRRNYG--PEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
           ++A EVL+ NY   P+ D+++  + + +   G  P     ++   H I +G++   R P 
Sbjct: 194 FLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQW--HEIRQGRL--PRIP- 247
Query: 308 PKVSKEAKELVKNMLDPNPYNR 329
             +S+E  EL+K M+ P+P  R
Sbjct: 248 QVLSQEFTELLKVMIHPDPERR 269

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           T G+ +G G FG  ++      G+ +     K+      T   +   + EV ++R   +H
Sbjct: 16  TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 68
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
            NI+ +   Y  K  + +V + CEG  L+  + + +  +       + +   + +   H 
Sbjct: 69  VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF---FKPGEQFCEIVGSPYYMAPEVLR 257
             ++HRDLK  N       E+  +K  DFGL+     +    QF ++ GS  +MAPEV+R
Sbjct: 128 KSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
                 Y  + DV++ G+++Y L+ G  P+
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214

>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 26/262 (9%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           +++G GEFG   +C +   G  YA K+ +K+ L   +D  +  REV     L +H ++V 
Sbjct: 15  EKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 73
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL----RIVKVCHENG 202
           Y  A+ + D + +  E C GG L D I            A  K +L    R ++  H   
Sbjct: 74  YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 133
Query: 203 VMHRDLKPENFLFADGS-ENSQLKAID----FGLSIFFKPGE-QFCEIVGSPY------- 249
           ++H D+KP N   +  S  N+  +  D        + FK G+      + SP        
Sbjct: 134 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSR 193
Query: 250 YMAPEVLRRNYG--PEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
           ++A EVL+ NY   P+ D+++  + + +   G  P     ++   H I +G++   R P 
Sbjct: 194 FLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQW--HEIRQGRLP--RIP- 247
Query: 308 PKVSKEAKELVKNMLDPNPYNR 329
             +S+E  EL+K M+ P+P  R
Sbjct: 248 QVLSQEFTELLKVMIHPDPERR 269

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           T G+ +G G FG  ++      G+ +     K+      T   +   + EV ++R   +H
Sbjct: 11  TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 63
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
            NI+ +   Y  K  + +V + CEG  L+  + + +  +       + +   + +   H 
Sbjct: 64  VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF---FKPGEQFCEIVGSPYYMAPEVLR 257
             ++HRDLK  N       E+  +K  DFGL+     +    QF ++ GS  +MAPEV+R
Sbjct: 123 KSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
                 Y  + DV++ G+++Y L+ G  P+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209

>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 26/262 (9%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           +++G GEFG   +C +   G  YA K+ +K+ L   +D  +  REV     L +H ++V 
Sbjct: 17  EKIGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVR 75
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL----RIVKVCHENG 202
           Y  A+ + D + +  E C GG L D I            A  K +L    R ++  H   
Sbjct: 76  YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 135
Query: 203 VMHRDLKPENFLFADGS-ENSQLKAID----FGLSIFFKPGE-QFCEIVGSPY------- 249
           ++H D+KP N   +  S  N+  +  D        + FK G+      + SP        
Sbjct: 136 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSR 195
Query: 250 YMAPEVLRRNYG--PEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
           ++A EVL+ NY   P+ D+++  + + +   G  P     ++   H I +G++   R P 
Sbjct: 196 FLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQW--HEIRQGRL--PRIP- 249
Query: 308 PKVSKEAKELVKNMLDPNPYNR 329
             +S+E  EL+K M+ P+P  R
Sbjct: 250 QVLSQEFTELLKVMIHPDPERR 271

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 135/326 (41%), Gaps = 78/326 (23%)
Query: 86  GKELGRGEFGITHQCFEIETGET--YACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           G ++GRG +G  ++    +  +   YA K+I    +          RE+ ++R L KHPN
Sbjct: 26  GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMS-----ACREIALLREL-KHPN 79
Query: 144 IVTYKEAY--EDKDAIYLVMELCEGGELFDRIVNKGHYTERA-----------AAAVGKT 190
           +++ ++ +       ++L+ +  E  +L+  I  K H   +A             ++   
Sbjct: 80  VISLQKVFLSHADRKVWLLFDYAEH-DLWHII--KFHRASKANKKPVQLPRGMVKSLLYQ 136
Query: 191 ILRIVKVCHENGVMHRDLKPENFL-FADGSENSQLKAIDFGLSIFF----KPGEQFCEIV 245
           IL  +   H N V+HRDLKP N L   +G E  ++K  D G +  F    KP      +V
Sbjct: 137 ILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVV 196
Query: 246 GSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPF-------------------- 283
            + +Y APE+L   R+Y   ID+W+ G I   LL   P F                    
Sbjct: 197 VTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 256
Query: 284 ------------WAETEEGIAHAIIRGKIDFERDPWPKVS-------------KEAKELV 318
                       W + ++   H+ +    DF R+ +   S              +A  L+
Sbjct: 257 IFNVMGFPADKDWEDIKKMPEHSTLMK--DFRRNTYTNCSLIKYMEKHKVKPDSKAFHLL 314
Query: 319 KNMLDPNPYNRLTLEEVLENPWIKND 344
           + +L  +P  R+T E+ +++P+   D
Sbjct: 315 QKLLTMDPIKRITSEQAMQDPYFLED 340

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 128/307 (41%), Gaps = 49/307 (15%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIA---KEKLKTEIDIDDVRREVEIMRHL 138
           +Y    E+G G +G  ++  +  +G   A K +           + I  VR EV ++R L
Sbjct: 10  RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVR-EVALLRRL 68
Query: 139 P--KHPNIVTYKE----AYEDKDA-IYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGK 189
              +HPN+V   +    +  D++  + LV E  +       D+    G   E     + +
Sbjct: 69  EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE-TIKDLMR 127
Query: 190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
             LR +   H N ++HRDLKPEN L   G     +K  DFGL+  +        +V + +
Sbjct: 128 QFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALTPVVVTLW 184
Query: 250 YMAPEV-LRRNYGPEIDVWSAGVIIY------ILLC---------------GVPPFWAET 287
           Y APEV L+  Y   +D+WS G I         L C               G+PP   E 
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP---ED 241
Query: 288 EEGIAHAIIRGKIDFERDP------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           +     ++ RG     R P       P++ +   +L+  ML  NP+ R++    L++ ++
Sbjct: 242 DWPRDVSLPRGAFP-PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
Query: 342 KNDNHAP 348
             D   P
Sbjct: 301 HKDEGNP 307

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/234 (29%), Positives = 106/234 (45%), Gaps = 36/234 (15%)
Query: 65  FQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIA------KEK 118
           ++L++V +N  E  I      G + G G FG+ ++ +   T  T A KK+A       E+
Sbjct: 9   YELKNVTNNFDERPI---SVGGNKXGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEE 63
Query: 119 LKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----- 173
           LK + D     +E+++     +H N+V       D D + LV      G L DR+     
Sbjct: 64  LKQQFD-----QEIKVXAKC-QHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDG 117
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI 233
                +  R   A G      +   HEN  +HRD+K  N L     E    K  DFGL+ 
Sbjct: 118 TPPLSWHXRCKIAQGAA--NGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLA- 171
Query: 234 FFKPGEQFCE------IVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVP 281
             +  E+F +      IVG+  Y APE LR    P+ D++S GV++  ++ G+P
Sbjct: 172 --RASEKFAQXVXXSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITGLP 223

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           +L+ +  CH  G+MHRD+KP N +     +  +L+ ID+GL+ F+ P +++   V S Y+
Sbjct: 141 LLKALDYCHSKGIMHRDVKPHNVMI--DHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYF 198
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
             PE+L   + Y   +D+WS G ++  ++    PF+   +              E +   
Sbjct: 199 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGY 258
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
           + +  ID +           R  W           VS EA +L+  +L  +   RLT +E
Sbjct: 259 LKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKE 318
Query: 335 VLENPWI 341
            +E+P+ 
Sbjct: 319 AMEHPYF 325

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           T G+ +G G FG  ++      G+ +     K+      T   +   + EV ++R   +H
Sbjct: 39  TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 91
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
            NI+ +   Y  K  + +V + CEG  L+  + + +  +       + +   + +   H 
Sbjct: 92  VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSI---FFKPGEQFCEIVGSPYYMAPEVLR 257
             ++HRDLK  N       E+  +K  DFGL+     +    QF ++ GS  +MAPEV+R
Sbjct: 151 KSIIHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
                 Y  + DV++ G+++Y L+ G  P+
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            +L +Y   K +G G  GI    ++       A KK+++   + +       RE+ +M+ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 79
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
           +  H NI+      T +++ E+   +Y+VMEL +      +++      ER +  + + +
Sbjct: 80  V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
             I K  H  G++HRDLKP N +      +  LK +DFGL+            V + YY 
Sbjct: 137 CGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 APEV-LRRNYGPEIDVWSAGVII 273
           APEV L   Y   +D+WS G I+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIM 215

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           T G+ +G G FG  ++      G+ +     K+      T   +   + EV ++R   +H
Sbjct: 31  TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 83
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
            NI+ +   Y  K  + +V + CEG  L+  + + +  +       + +   + +   H 
Sbjct: 84  VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 142
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSI---FFKPGEQFCEIVGSPYYMAPEVLR 257
             ++HRDLK  N       E+  +K  DFGL+     +    QF ++ GS  +MAPEV+R
Sbjct: 143 KSIIHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 199
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
                 Y  + DV++ G+++Y L+ G  P+
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 108/226 (47%), Gaps = 18/226 (7%)
Query: 130 REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAV 187
           REV+++R   +HPN++ Y    +D+   Y+ +ELC    L + +  K   H        +
Sbjct: 66  REVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEPITLL 124
Query: 188 GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI--DFGLSIFFKPGEQ-FCEI 244
            +T   +  + H   ++HRDLKP N L +  + + ++KA+  DFGL      G   F   
Sbjct: 125 QQTTSGLAHL-HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR 183
Query: 245 VGSP---YYMAPEVL----RRNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAII 296
            G P    ++APE+L    + N    +D++SAG + Y ++  G  PF    +      I+
Sbjct: 184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA--NIL 241
Query: 297 RGKIDFE-RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
            G    +   P       A+EL++ M+  +P  R + + VL++P+ 
Sbjct: 242 LGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           T G+ +G G FG  ++      G+ +     K+      T   +   + EV ++R   +H
Sbjct: 11  TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 63
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
            NI+ +   Y  K  + +V + CEG  L+  + + +  +       + +   + +   H 
Sbjct: 64  VNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSI---FFKPGEQFCEIVGSPYYMAPEVLR 257
             ++HRDLK  N       E+  +K  DFGL+     +    QF ++ GS  +MAPEV+R
Sbjct: 123 KSIIHRDLKSNNIFL---HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
                 Y  + DV++ G+++Y L+ G  P+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 15/208 (7%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            +L +Y   K +G G  GI    ++       A KK+++   + +       RE+ +M+ 
Sbjct: 26  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 84
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
           +  H NI+      T +++ E+   +Y+VMEL +      +++      ER +  + + +
Sbjct: 85  V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQML 141
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
             I K  H  G++HRDLKP N +      +  LK +DFGL+            V + YY 
Sbjct: 142 CGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 197
Query: 252 APEV-LRRNYGPEIDVWSAGVIIYILLC 278
           APEV L   Y   +D+WS G I+  ++C
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVC 225

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 38/187 (20%)
Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY 250
           +L+ +  CH  G+MHRD+KP N +     +  +L+ ID+GL+ F+ P +++   V S Y+
Sbjct: 146 LLKALDYCHSKGIMHRDVKPHNVMI--DHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYF 203
Query: 251 MAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETE--------------EGIAHA 294
             PE+L   + Y   +D+WS G ++  ++    PF+   +              E +   
Sbjct: 204 KGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGY 263
Query: 295 IIRGKIDFE-----------RDPWPK---------VSKEAKELVKNMLDPNPYNRLTLEE 334
           + +  ID +           R  W           VS EA +L+  +L  +   RLT +E
Sbjct: 264 LKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKE 323
Query: 335 VLENPWI 341
            +E+P+ 
Sbjct: 324 AMEHPYF 330

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            +L +Y   K +G G  GI    ++       A KK+++   + +       RE+ +M+ 
Sbjct: 23  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 81
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
           +  H NI+      T +++ E+   +Y+VMEL +      +++      ER +  + + +
Sbjct: 82  V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQML 138
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
             I K  H  G++HRDLKP N +      +  LK +DFGL+            V + YY 
Sbjct: 139 CGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMVPFVVTRYYR 194
Query: 252 APEV-LRRNYGPEIDVWSAGVII 273
           APEV L   Y   +D+WS G I+
Sbjct: 195 APEVILGMGYKENVDIWSVGCIM 217

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           DK T GK LG G FG  +  +   I+  +      +A + LK   TE D+ D+  E+E+M
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
           + + KH NI+T   A      +Y+++E    G L + +                V +   
Sbjct: 95  KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           T +   +    + R ++       +HRDL   N L    +EN+ +K  DFGL+      +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 15/208 (7%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            +L +Y   K +G G  GI    ++       A KK+++   + +       RE+ +M+ 
Sbjct: 15  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 73
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
           +  H NI+      T +++ E+   +Y+VMEL +      +++      ER +  + + +
Sbjct: 74  V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQML 130
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
             I K  H  G++HRDLKP N +      +  LK +DFGL+            V + YY 
Sbjct: 131 CGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 186
Query: 252 APEV-LRRNYGPEIDVWSAGVIIYILLC 278
           APEV L   Y   +D+WS G I+  ++C
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVC 214

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 113/262 (43%), Gaps = 50/262 (19%)
Query: 75  AEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI 134
           ++  I D+Y     +G G +G   + ++       A KKI +   +  ID   + RE+ I
Sbjct: 47  SDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILR-VFEDLIDCKRILREIAI 105
Query: 135 MR-----HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY-TERAAAAVG 188
           +      H+ K  +IV  K+  E  D +Y+V+E+ +    F ++     Y TE     + 
Sbjct: 106 LNRLNHDHVVKVLDIVIPKDV-EKFDELYVVLEIADSD--FKKLFRTPVYLTELHIKTLL 162
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS------------IFFK 236
             +L  VK  H  G++HRDLKP N L    +++  +K  DFGL+            +   
Sbjct: 163 YNLLVGVKYVHSAGILHRDLKPANCLV---NQDCSVKVCDFGLARTVDYPENGNSQLPIS 219
Query: 237 PGEQFCEIVGSP----------------YYMAPE--VLRRNYGPEIDVWSAGVIIYILLC 278
           P E    +V  P                +Y APE  +L+ NY   IDVWS G I   LL 
Sbjct: 220 PREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
Query: 279 GVPPFWAETEEGIAHAIIRGKI 300
            +       +E +A+   RG +
Sbjct: 280 MI-------KENVAYHADRGPL 294

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/303 (24%), Positives = 120/303 (39%), Gaps = 69/303 (22%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           +G G FG   +      G+TY  +++     K E       REV+ +  L  H NIV Y 
Sbjct: 20  IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE-------REVKALAKLD-HVNIVHYN 71
Query: 149 EAYEDKD-----------------------------AIYLVMELCEGGELFDRI-VNKGH 178
             ++  D                              +++ ME C+ G L   I   +G 
Sbjct: 72  GCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 131
Query: 179 YTERAAA-AVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP 237
             ++  A  + + I + V   H   ++HRDLKP N    D     Q+K  DFGL    K 
Sbjct: 132 KLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVD---TKQVKIGDFGLVTSLKN 188
Query: 238 GEQFCEIVGSPYYMAPE-VLRRNYGPEIDVWSAGVIIYILL--CGVP----PFWAETEEG 290
             +     G+  YM+PE +  ++YG E+D+++ G+I+  LL  C        F+ +  +G
Sbjct: 189 DGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDG 248
Query: 291 IAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI------KND 344
           I   I                K+ K L++ +L   P +R    E+L    +      KN+
Sbjct: 249 IISDIF--------------DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNE 294
Query: 345 NHA 347
            H 
Sbjct: 295 RHT 297

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            +L +Y   K +G G  GI    ++       A KK+++   + +       RE+ +M+ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 79
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
           +  H NI+      T +++ E+   +Y+VMEL +      +++      ER +  + + +
Sbjct: 80  V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
             I K  H  G++HRDLKP N +      +  LK +DFGL+            V + YY 
Sbjct: 137 CGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 APEV-LRRNYGPEIDVWSAGVII 273
           APEV L   Y   +D+WS G I+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIM 215

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            +L +Y   K +G G  GI    ++       A KK+++   + +       RE+ +M+ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 79
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
           +  H NI+      T +++ E+   +Y+VMEL +      +++      ER +  + + +
Sbjct: 80  V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
             I K  H  G++HRDLKP N +      +  LK +DFGL+            V + YY 
Sbjct: 137 CGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 192
Query: 252 APEV-LRRNYGPEIDVWSAGVII 273
           APEV L   Y   +D+WS G I+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIM 215

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 77  GNILD--KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI 134
           G+++D  + TF +E+G G+FG+ H  + +   +  A K I +  +  E    D   E E+
Sbjct: 1   GSVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEE----DFIEEAEV 55
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILR 193
           M  L  HP +V       ++  I LV E  E G L D +   +G +       +   +  
Sbjct: 56  MMKL-SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 114
Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---Y 250
            +    E  V+HRDL   N L     EN  +K  DFG++ F    +Q+    G+ +   +
Sbjct: 115 GMAYLEEASVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKW 170
Query: 251 MAPEVLR-RNYGPEIDVWSAGVIIY 274
            +PEV     Y  + DVWS GV+++
Sbjct: 171 ASPEVFSFSRYSSKSDVWSFGVLMW 195

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            +L +Y   K +G G  GI    ++       A KK+++   + +       RE+ +M+ 
Sbjct: 22  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 80
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
           +  H NI+      T +++ E+   +Y+VMEL +      +++      ER +  + + +
Sbjct: 81  V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQML 137
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
             I K  H  G++HRDLKP N +      +  LK +DFGL+            V + YY 
Sbjct: 138 CGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYR 193
Query: 252 APEV-LRRNYGPEIDVWSAGVII 273
           APEV L   Y   +D+WS G I+
Sbjct: 194 APEVILGMGYKENVDIWSVGCIM 216

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 21/210 (10%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           T G+ +G G FG  ++      G+ +     K+      T   +   + EV ++R   +H
Sbjct: 11  TVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK-TRH 63
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHE 200
            NI+ +   Y     + +V + CEG  L+  + + +  +       + +   + +   H 
Sbjct: 64  VNILLFM-GYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF---FKPGEQFCEIVGSPYYMAPEVLR 257
             ++HRDLK  N       E+  +K  DFGL+     +    QF ++ GS  +MAPEV+R
Sbjct: 123 KSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 258 RN----YGPEIDVWSAGVIIYILLCGVPPF 283
                 Y  + DV++ G+++Y L+ G  P+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 124/280 (44%), Gaps = 30/280 (10%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           +++G G FG  H+      G   A K + ++    E  +++  REV IM+ L +HPNIV 
Sbjct: 43  EKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAE-RVNEFLREVAIMKRL-RHPNIVL 98
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKG----HYTERAAAAVGKTILRIVKVCHENG 202
           +  A      + +V E    G L+ R+++K        ER   ++   + + +   H   
Sbjct: 99  FMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 203 --VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR 257
             ++HRDLK  N L     +   +K  DFGLS        F       G+P +MAPEVLR
Sbjct: 158 PPIVHRDLKSPNLLV---DKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLR 212
Query: 258 RNYGPE-IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK---IDFERDPWPKVSKE 313
                E  DV+S GVI++ L     P W         A +  K   ++  R+  P+V+  
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQP-WGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAA- 270
Query: 314 AKELVKNMLDPNPYNRLTLEEVLE--NPWIKNDNHAPNVS 351
              +++      P+ R +   +++   P IK+    PN S
Sbjct: 271 ---IIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNRS 307

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 123/287 (42%), Gaps = 47/287 (16%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKI--AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           LG+G FG   +         YA KKI   +EKL T      +  EV ++  L  H  +V 
Sbjct: 14  LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST------ILSEVXLLASL-NHQYVVR 66
Query: 147 YKEAY-------------EDKDAIYLVMELCEGGELFDRIVNKGHYTER-AAAAVGKTIL 192
           Y  A+             + K  +++  E CE   L+D I ++    +R     + + IL
Sbjct: 67  YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-------------PG- 238
             +   H  G++HR+LKP N +F D S N  +K  DFGL+                 PG 
Sbjct: 127 EALSYIHSQGIIHRNLKPXN-IFIDESRN--VKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 239 -EQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHA 294
            +     +G+  Y+A EVL    +Y  +ID +S G+I +     + PF    E   I   
Sbjct: 184 SDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFF---EXIYPFSTGXERVNILKK 240
Query: 295 IIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           +    I+F  D      K  K++++ ++D +P  R     +L + W+
Sbjct: 241 LRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 89  LGRGEFGITHQCFEIETGETYA--CKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           +G G FG  ++      G+ +     KI K    T       R EV ++R   +H NI+ 
Sbjct: 44  IGSGSFGTVYK------GKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRK-TRHVNILL 96
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHENGVMH 205
           +   Y  KD + +V + CEG  L+  + V +  +       + +   + +   H   ++H
Sbjct: 97  FM-GYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIH 155
Query: 206 RDLKPENFLFADGSENSQLKAIDFGLSIF---FKPGEQFCEIVGSPYYMAPEVLRRN--- 259
           RD+K  N    +G     +K  DFGL+     +   +Q  +  GS  +MAPEV+R     
Sbjct: 156 RDMKSNNIFLHEGLT---VKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNN 212
Query: 260 -YGPEIDVWSAGVIIYILLCGVPPF 283
            +  + DV+S G+++Y L+ G  P+
Sbjct: 213 PFSFQSDVYSYGIVLYELMTGELPY 237

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 119/269 (44%), Gaps = 29/269 (10%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKI-----AKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           ELGRG +G+  +   + +G+  A K+I     ++E+ +   D+D   R V+        P
Sbjct: 41  ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDC-------P 93
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGH-YTERAAAAVGKTILRIVKVCH 199
             VT+  A   +  +++  EL +    + + ++++KG    E     +  +I++ ++  H
Sbjct: 94  FTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 153
Query: 200 EN-GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-----KPGEQFCEIVGSPYYMAP 253
               V+HRD+KP N L    +   Q+K  DFG+S +      K  +  C+   +P  + P
Sbjct: 154 SKLSVIHRDVKPSNVLI---NALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINP 210
Query: 254 EVLRRNYGPEIDVWSAGVIIYILLCGVPPF--WAETEEGIAHAIIRGKIDFERDPWPKVS 311
           E+ ++ Y  + D+WS G+    L     P+  W    + +   +         D   K S
Sbjct: 211 ELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD---KFS 267
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPW 340
            E  +     L  N   R T  E+ ++P+
Sbjct: 268 AEFVDFTSQCLKKNSKERPTYPELXQHPF 296

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 68.6 bits (166), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            +L +Y   K +G G  GI    ++       A KK+++   + +       RE+ +M+ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 79
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
           +  H NI+      T +++ E+   +Y+VMEL +      +++      ER +  + + +
Sbjct: 80  V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSP 248
             I K  H  G++HRDLKP N +      +  LK +DFGL+     G  F    E+V + 
Sbjct: 137 CGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA--RTAGTSFMMEPEVV-TR 189
Query: 249 YYMAPEV-LRRNYGPEIDVWSAGVIIYILLC 278
           YY APEV L   Y   +D+WS G I+  ++C
Sbjct: 190 YYRAPEVILGMGYKENVDIWSVGCIMGEMVC 220

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 15/203 (7%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            +L +Y   K +G G  GI    ++       A KK+++   + +       RE+ +M+ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 79
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
           +  H NI+      T +++ E+   +Y+VMEL +      +++      ER +  + + +
Sbjct: 80  V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
             I K  H  G++HRDLKP N +      +  LK +DFGL+            V + YY 
Sbjct: 137 CGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPEVVTRYYR 192
Query: 252 APEV-LRRNYGPEIDVWSAGVII 273
           APEV L   Y   +D+WS G I+
Sbjct: 193 APEVILGMGYKENVDIWSVGCIM 215

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 84/188 (44%), Gaps = 35/188 (18%)
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
           N++  K  +   D + + M   E     D I+N   + E     +   + + +K  H+ G
Sbjct: 81  NVMGVKYCFRKNDHVVIAMPYLEHESFLD-ILNSLSFQEVREYMLN--LFKALKRIHQFG 137
Query: 203 VMHRDLKPENFLF--------------ADGSENSQLKAIDF-------------GLSIFF 235
           ++HRD+KP NFL+              A G+ +++++ + F               SI  
Sbjct: 138 IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICL 197
Query: 236 KPGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAH 293
              +Q     G+P + APEVL +  N    ID+WSAGVI   LL G  PF+  +++  A 
Sbjct: 198 SRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTAL 257
Query: 294 A---IIRG 298
           A    IRG
Sbjct: 258 AQIMTIRG 265

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 77  GNILD--KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI 134
           G+++D  + TF +E+G G+FG+ H  + +   +  A K I +  +  E    D   E E+
Sbjct: 1   GSVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEE----DFIEEAEV 55
Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILR 193
           M  L  HP +V       ++  I LV E  E G L D +   +G +       +   +  
Sbjct: 56  MMKL-SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCE 114
Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---Y 250
            +    E  V+HRDL   N L     EN  +K  DFG++ F    +Q+    G+ +   +
Sbjct: 115 GMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKW 170
Query: 251 MAPEVLR-RNYGPEIDVWSAGVIIY 274
            +PEV     Y  + DVWS GV+++
Sbjct: 171 ASPEVFSFSRYSSKSDVWSFGVLMW 195

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 28/259 (10%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK--HPNIVT 146
           +GRG FG+   C      +  A K+I  E  +    ++        +R L +  HPNIV 
Sbjct: 16  VGRGAFGVV--CKAKWRAKDVAIKQIESESERKAFIVE--------LRQLSRVNHPNIVK 65
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNK---GHYTERAAAAVGKTILRIVKVCHE--- 200
              A    + + LVME  EGG L++ +       +YT   A +      + V   H    
Sbjct: 66  LYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RN 259
             ++HRDLKP N L   G   + LK  DFG +   +         GS  +MAPEV    N
Sbjct: 124 KALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEGSN 179
Query: 260 YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKELV 318
           Y  + DV+S G+I++ ++    PF  +   G A  I+    +  R P  K + K  + L+
Sbjct: 180 YSEKCDVFSWGIILWEVITRRKPF--DEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLM 237
Query: 319 KNMLDPNPYNRLTLEEVLE 337
                 +P  R ++EE+++
Sbjct: 238 TRCWSKDPSQRPSMEEIVK 256

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 91/196 (46%), Gaps = 15/196 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           TF +E+G G+FG+ H  + +   +  A K I KE   +E   DD   E E+M  L  HP 
Sbjct: 30  TFVQEIGSGQFGLVHLGYWLNKDKV-AIKTI-KEGSMSE---DDFIEEAEVMMKL-SHPK 83
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHENG 202
           +V       ++  I LV E  E G L D +   +G +       +   +   +    E  
Sbjct: 84  LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 143
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLR-R 258
           V+HRDL   N L     EN  +K  DFG++ F    +Q+    G+ +   + +PEV    
Sbjct: 144 VIHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFS 199
Query: 259 NYGPEIDVWSAGVIIY 274
            Y  + DVWS GV+++
Sbjct: 200 RYSSKSDVWSFGVLMW 215

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 28/259 (10%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK--HPNIVT 146
           +GRG FG+   C      +  A K+I  E  +    ++        +R L +  HPNIV 
Sbjct: 17  VGRGAFGVV--CKAKWRAKDVAIKQIESESERKAFIVE--------LRQLSRVNHPNIVK 66
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNK---GHYTERAAAAVGKTILRIVKVCHE--- 200
              A    + + LVME  EGG L++ +       +YT   A +      + V   H    
Sbjct: 67  LYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RN 259
             ++HRDLKP N L   G   + LK  DFG +   +         GS  +MAPEV    N
Sbjct: 125 KALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEGSN 180
Query: 260 YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKELV 318
           Y  + DV+S G+I++ ++    PF  +   G A  I+    +  R P  K + K  + L+
Sbjct: 181 YSEKCDVFSWGIILWEVITRRKPF--DEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLM 238
Query: 319 KNMLDPNPYNRLTLEEVLE 337
                 +P  R ++EE+++
Sbjct: 239 TRCWSKDPSQRPSMEEIVK 257

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            +L +Y   K +G G  GI    ++       A KK+++   + +       RE+ +M+ 
Sbjct: 21  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 79
Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
           +  H NI+      T +++ E+   +Y+VMEL +      +++      ER +  + + +
Sbjct: 80  V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSYLLYQML 136
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSP 248
             I K  H  G++HRDLKP N +      +  LK +DFGL+     G  F    E+V + 
Sbjct: 137 CGI-KHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA--RTAGTSFMMEPEVV-TR 189
Query: 249 YYMAPEV-LRRNYGPEIDVWSAGVIIYILLC 278
           YY APEV L   Y   +D+WS G I+  ++C
Sbjct: 190 YYRAPEVILGMGYKENVDLWSVGCIMGEMVC 220

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 124/280 (44%), Gaps = 30/280 (10%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           +++G G FG  H+      G   A K + ++    E  +++  REV IM+ L +HPNIV 
Sbjct: 43  EKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAE-RVNEFLREVAIMKRL-RHPNIVL 98
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKG----HYTERAAAAVGKTILRIVKVCHENG 202
           +  A      + +V E    G L+ R+++K        ER   ++   + + +   H   
Sbjct: 99  FMGAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 203 --VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR 257
             ++HR+LK  N L     +   +K  DFGLS        F       G+P +MAPEVLR
Sbjct: 158 PPIVHRNLKSPNLLV---DKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLR 212
Query: 258 RNYGPE-IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK---IDFERDPWPKVSKE 313
                E  DV+S GVI++ L     P W         A +  K   ++  R+  P+V+  
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQP-WGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAA- 270
Query: 314 AKELVKNMLDPNPYNRLTLEEVLE--NPWIKNDNHAPNVS 351
              +++      P+ R +   +++   P IK+    PN S
Sbjct: 271 ---IIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNRS 307

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 86  GKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV 145
           G+ LG+G FG   +    ETGE    K++ +   +T+       +EV++MR L +HPN++
Sbjct: 15  GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQ---RTFLKEVKVMRCL-EHPNVL 70
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVM 204
            +         +  + E  +GG L   I +    Y      +  K I   +   H   ++
Sbjct: 71  KFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNII 130
Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSIFF--------------KPG-EQFCEIVGSPY 249
           HRDL   N L     EN  +   DFGL+                 KP  ++   +VG+PY
Sbjct: 131 HRDLNSHNCLV---RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 250 YMAPEVLR-RNYGPEIDVWSAGVII 273
           +MAPE++  R+Y  ++DV+S G+++
Sbjct: 188 WMAPEMINGRSYDEKVDVFSFGIVL 212

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           DK T GK LG G FG  +  +   I+  +      +A + LK   TE D+ D+  E+E+M
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
           + + KH NI+    A      +Y+++E    G L + +                V +   
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           T +   +    + R ++       +HRDL   N L    +EN+ +K  DFGL+      +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            +           +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           DK T GK LG G FG  +  +   I+  +      +A + LK   TE D+ D+  E+E+M
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
           + + KH NI+    A      +Y+++E    G L + +                V +   
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           T +   +    + R ++       +HRDL   N L    +EN+ +K  DFGL+      +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260

>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6 Length = 149

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
           +AD L +DQ+++ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DG
Sbjct: 1   MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 437 NGLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
           NG +   EF+  M+  +K   +++ L +AFR FDK+Q+GFI
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFI 101

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 133/308 (43%), Gaps = 49/308 (15%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI-------------- 125
           ++ Y   + L +G+F     C   +  + YA KK  K  L+ + D               
Sbjct: 30  INDYRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKY 87
Query: 126 DDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGEL--FDR--IVNKGHYTE 181
           DD + E++I+  + K+   +T +    + D +Y++ E  E   +  FD    V   +YT 
Sbjct: 88  DDFKNELQIITDI-KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC 146
Query: 182 RAAAAVGKTILRIV-----KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK 236
                V K I++ V      + +E  + HRD+KP N L     +N ++K  DFG S +  
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM---DKNGRVKLSDFGESEYM- 202
Query: 237 PGEQFCEIVGSPYYMAPEVL--RRNY-GPEIDVWSAGVIIYILLCGVPPF-----WAETE 288
             ++     G+  +M PE      +Y G ++D+WS G+ +Y++   V PF       E  
Sbjct: 203 VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELF 262
Query: 289 EGIAHAIIRGKIDFERDPWPKVSKEAK-----------ELVKNMLDPNPYNRLTLEEVLE 337
             I    I   +D     +P  +K++            + +K  L  NP  R+T E+ L+
Sbjct: 263 NNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322
Query: 338 NPWIKNDN 345
           + W+ + N
Sbjct: 323 HEWLADTN 330

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 17/211 (8%)
Query: 85  FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI----DDVRREVEIMRHLPK 140
           + K++G+G FG+ H+   ++     A K +     + E ++     + +REV IM +L  
Sbjct: 23  YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-N 81
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA--VGKTILRIVKVC 198
           HPNIV       +     +VME    G+L+ R+++K H  + +     +    L I  + 
Sbjct: 82  HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 199 HENG-VMHRDLKPENFLFADGSENSQL--KAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
           ++N  ++HRDL+  N       EN+ +  K  DFGLS   +       ++G+  +MAPE 
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGLLGNFQWMAPET 197
Query: 256 L---RRNYGPEIDVWSAGVIIYILLCGVPPF 283
           +     +Y  + D +S  +I+Y +L G  PF
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPF 228

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T    LGRG FG  H+  + +TG   A KK+  E  + E        E+     L   P 
Sbjct: 75  THQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE--------ELVACAGL-SSPR 125
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTE-RAAAAVGKTILRIVKVCHENG 202
           IV    A  +   + + MEL EGG L   I   G   E RA   +G+  L  ++  H   
Sbjct: 126 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQA-LEGLEYLHTRR 184
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP---GEQFCE---IVGSPYYMAPE-V 255
           ++H D+K +N L +  S+ S+    DFG ++  +P   G+       I G+  +MAPE V
Sbjct: 185 ILHGDVKADNVLLS--SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV 242
Query: 256 LRRNYGPEIDVWSAGVIIYILLCGVPPF 283
           + +    ++D+WS+  ++  +L G  P+
Sbjct: 243 MGKPCDAKVDIWSSCCMMLHMLNGCHPW 270

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           DK T GK LG G FG  +  +   I+  +      +A + LK   TE D+ D+  E+E+M
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
           + + KH NI+    A      +Y+++E    G L + +                V +   
Sbjct: 95  KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           T +   +    + R ++       +HRDL   N L    +EN+ +K  DFGL+      +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           DK T GK LG G FG  +  +   I+  +      +A + LK   TE D+ D+  E+E+M
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
           + + KH NI+    A      +Y+++E    G L + +                V +   
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           T +   +    + R ++       +HRDL   N L    +EN+ ++  DFGL+      +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMRIADFGLARDINNID 211
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260

>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 149

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
           +AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           NG +   EF+TM    +K   +++ + +AFR FDK+ +GFI
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFI 101

>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State ( Crystal Form 2) Length = 149

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
           +AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           NG +   EF+TM    +K   +++ + +AFR FDK+ +GFI
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFI 101

>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin Length = 149

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
           +AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           NG +   EF+TM    +K   +++ + +AFR FDK+ +GFI
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFI 101

>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle Myosin Light Chain Kinase From Combination Of Nmr And Aqueous And Contrast-matched Saxs Data Length = 148

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           G +   EF+TM    +K   +++ + +AFR FDK+ +GFI
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFI 100

>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex By Multidimensional Nmr Length = 148

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           G +   EF+TM    +K   +++ + +AFR FDK+ +GFI
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFI 100

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           DK T GK LG G FG  +  +   I+  +      +A + LK   TE D+ D+  E+E+M
Sbjct: 27  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
           + + KH NI+    A      +Y+++E    G L + +                V +   
Sbjct: 87  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           T +   +    + R ++       +HRDL   N L    +EN+ +K  DFGL+      +
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 203
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 252

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           DK T GK LG G FG  +  +   I+  +      +A + LK   TE D+ D+  E+E+M
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
           + + KH NI+    A      +Y+++E    G L + +                V +   
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           T +   +    + R ++       +HRDL   N L    +EN+ +K  DFGL+      +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
              +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           DK T GK LG G FG  +  +   I+  +      +A + LK   TE D+ D+  E+E+M
Sbjct: 81  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
           + + KH NI+    A      +Y+++E    G L + +                V +   
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           T +   +    + R ++       +HRDL   N L    +EN+ +K  DFGL+      +
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 257
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306

>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase Length = 149

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
           +AD L  DQ+++ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DG
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 437 NGLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
           NG +   EF+  M+  +K   +++ L +AFR FDK+Q+GFI
Sbjct: 61  NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFI 101

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 15/196 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           TF +E+G G+FG+ H  + +   +  A K I +  +  E    D   E E+M  L  HP 
Sbjct: 13  TFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEE----DFIEEAEVMMKL-SHPK 66
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHENG 202
           +V       ++  I LV E  E G L D +   +G +       +   +   +    E  
Sbjct: 67  LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 126
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLR-R 258
           V+HRDL   N L     EN  +K  DFG++ F    +Q+    G+ +   + +PEV    
Sbjct: 127 VIHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFS 182
Query: 259 NYGPEIDVWSAGVIIY 274
            Y  + DVWS GV+++
Sbjct: 183 RYSSKSDVWSFGVLMW 198

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           DK T GK LG G FG  +  +   I+  +      +A + LK   TE D+ D+  E+E+M
Sbjct: 22  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
           + + KH NI+    A      +Y+++E    G L + +                V +   
Sbjct: 82  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           T +   +    + R ++       +HRDL   N L    +EN+ +K  DFGL+      +
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLV---TENNVMKIADFGLARDINNID 198
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 247

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           DK T GK LG G FG  +  +   I+  +      +A + LK   TE D+ D+  E+E+M
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
           + + KH NI+    A      +Y+++E    G L + +                V +   
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           T +   +    + R ++       +HRDL   N L    +EN+ +K  DFGL+      +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
              +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 212 XXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           DK T GK LG G FG  +  +   I+  +      +A + LK   TE D+ D+  E+E+M
Sbjct: 24  DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
           + + KH NI+    A      +Y+++E    G L + +                V +   
Sbjct: 84  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           T +   +    + R ++       +HRDL   N L    +EN+ +K  DFGL+      +
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 200
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 249

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 15/196 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           TF +E+G G+FG+ H  + +   +  A K I +  +  E    D   E E+M  L  HP 
Sbjct: 8   TFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEE----DFIEEAEVMMKL-SHPK 61
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHENG 202
           +V       ++  I LV E  E G L D +   +G +       +   +   +    E  
Sbjct: 62  LVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 121
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLR-R 258
           V+HRDL   N L     EN  +K  DFG++ F    +Q+    G+ +   + +PEV    
Sbjct: 122 VIHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFS 177
Query: 259 NYGPEIDVWSAGVIIY 274
            Y  + DVWS GV+++
Sbjct: 178 RYSSKSDVWSFGVLMW 193

>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A New Way Of Making An Old Binding Mode Length = 179

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
           +AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           NG +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 101

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           D+   GK LG G FG  +  +   ++  +     K+A + LK   TE D+ D+  E+E+M
Sbjct: 28  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGEL-----------FDRIVNKGHYTE--- 181
           + + KH NI+    A      +Y+++E    G L            +   N  H  E   
Sbjct: 88  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 182 --RAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
             +   +    + R ++       +HRDL   N L    +E++ +K  DFGL+      +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 204
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 89/196 (45%), Gaps = 15/196 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           TF +E+G G+FG+ H  + +   +  A K I +  +  E    D   E E+M  L  HP 
Sbjct: 11  TFVQEIGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEE----DFIEEAEVMMKL-SHPK 64
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCHENG 202
           +V       ++  I LV E  E G L D +   +G +       +   +   +    E  
Sbjct: 65  LVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 124
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLR-R 258
           V+HRDL   N L     EN  +K  DFG++ F    +Q+    G+ +   + +PEV    
Sbjct: 125 VIHRDLAARNCLVG---ENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFS 180
Query: 259 NYGPEIDVWSAGVIIY 274
            Y  + DVWS GV+++
Sbjct: 181 RYSSKSDVWSFGVLMW 196

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           D+   GK LG G FG  +  +   ++  +     K+A + LK   TE D+ D+  E+E+M
Sbjct: 28  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-----------VNKGHYTE--- 181
           + + KH NI+    A      +Y+++E    G L + +            N  H  E   
Sbjct: 88  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 182 --RAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
             +   +    + R ++       +HRDL   N L    +E++ +K  DFGL+      +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 204
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T    +GRG FG  H+  + +TG   A KK+  E  + E        E+     L   P 
Sbjct: 61  THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE--------ELVACAGL-SSPR 111
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTE-RAAAAVGKTILRIVKVCHENG 202
           IV    A  +   + + MEL EGG L   I   G   E RA   +G+  L  ++  H   
Sbjct: 112 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQA-LEGLEYLHTRR 170
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP---GEQFCE---IVGSPYYMAPE-V 255
           ++H D+K +N L +  S+ S+    DFG ++  +P   G+       I G+  +MAPE V
Sbjct: 171 ILHGDVKADNVLLS--SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV 228
Query: 256 LRRNYGPEIDVWSAGVIIYILLCGVPPF 283
           + +    ++D+WS+  ++  +L G  P+
Sbjct: 229 MGKPCDAKVDIWSSCCMMLHMLNGCHPW 256

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           D+   GK LG G FG  +  +   ++  +     K+A + LK   TE D+ D+  E+E+M
Sbjct: 17  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-----------VNKGHYTE--- 181
           + + KH NI+    A      +Y+++E    G L + +            N  H  E   
Sbjct: 77  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 182 --RAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
             +   +    + R ++       +HRDL   N L    +E++ +K  DFGL+      +
Sbjct: 137 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 193
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 194 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 242

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           D+   GK LG G FG  +  +   ++  +     K+A + LK   TE D+ D+  E+E+M
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGEL-----------FDRIVNKGHYTE--- 181
           + + KH NI+    A      +Y+++E    G L            +   N  H  E   
Sbjct: 73  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 182 --RAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
             +   +    + R ++       +HRDL   N L    +E++ +K  DFGL+      +
Sbjct: 133 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 189
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 190 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 238

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           D+   GK LG G FG  +  +   ++  +     K+A + LK   TE D+ D+  E+E+M
Sbjct: 28  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-----------VNKGHYTE--- 181
           + + KH NI+    A      +Y+++E    G L + +            N  H  E   
Sbjct: 88  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 182 --RAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
             +   +    + R ++       +HRDL   N L    +E++ +K  DFGL+      +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 204
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 205 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           D+   GK LG G FG  +  +   ++  +     K+A + LK   TE D+ D+  E+E+M
Sbjct: 20  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-----------VNKGHYTE--- 181
           + + KH NI+    A      +Y+++E    G L + +            N  H  E   
Sbjct: 80  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 182 --RAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
             +   +    + R ++       +HRDL   N L    +E++ +K  DFGL+      +
Sbjct: 140 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 196
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 197 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 245

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           D+   GK LG G FG  +  +   ++  +     K+A + LK   TE D+ D+  E+E+M
Sbjct: 21  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-----------VNKGHYTE--- 181
           + + KH NI+    A      +Y+++E    G L + +            N  H  E   
Sbjct: 81  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 182 --RAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
             +   +    + R ++       +HRDL   N L    +E++ +K  DFGL+      +
Sbjct: 141 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 197
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 198 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 246

>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM COMPLEX Length = 152

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
Query: 376 VVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVD 435
            +AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D D
Sbjct: 3   AMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 62
Query: 436 GNGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           GNG +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 63  GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 104

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           DK T GK LG G FG  +  +   I+  +      +A + LK   TE D+ D+  E+E+M
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
           + + KH NI+    A      +Y+++     G L + +                V +   
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           T +   +    + R ++       +HRDL   N L    +EN+ +K  DFGL+      +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260

>pdb|2YGG|B Chain B, Complex Of Cambr And Cam Length = 150

Iteration: 1
 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
           +AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           NG +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 101

>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE Fragment Length = 149

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
           +AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           NG +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 101

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           D+   GK LG G FG  +  +   ++  +     K+A + LK   TE D+ D+  E+E+M
Sbjct: 69  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-----------VNKGHYTE--- 181
           + + KH NI+    A      +Y+++E    G L + +            N  H  E   
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 182 --RAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
             +   +    + R ++       +HRDL   N L    +E++ +K  DFGL+      +
Sbjct: 189 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 245
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 246 YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 294

>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 150

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
           +AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DG
Sbjct: 2   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           NG +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 62  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 102

>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures Length = 148

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           G +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 100

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T    +GRG FG  H+  + +TG   A KK+  E  + E        E+     L   P 
Sbjct: 77  THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE--------ELVACAGL-SSPR 127
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTE-RAAAAVGKTILRIVKVCHENG 202
           IV    A  +   + + MEL EGG L   I   G   E RA   +G+  L  ++  H   
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQA-LEGLEYLHTRR 186
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP---GEQFCE---IVGSPYYMAPE-V 255
           ++H D+K +N L +  S+ S+    DFG ++  +P   G+       I G+  +MAPE V
Sbjct: 187 ILHGDVKADNVLLS--SDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVV 244
Query: 256 LRRNYGPEIDVWSAGVIIYILLCGVPPF 283
           + +    ++D+WS+  ++  +L G  P+
Sbjct: 245 MGKPCDAKVDIWSSCCMMLHMLNGCHPW 272

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 108/255 (42%), Gaps = 38/255 (14%)
Query: 123 IDIDDVR-REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELC--------EGGELFDRI 173
           ID  D+   E++++     HPN++ Y  +      +Y+ +ELC        E   + D  
Sbjct: 67  IDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDE- 125
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA----------DGSENSQ 223
            N     E    ++ + I   V   H   ++HRDLKP+N L +           G+EN +
Sbjct: 126 -NLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLR 184
Query: 224 LKAIDFGLSIFFKPGEQFCEI-----VGSPYYMAPEVL----RRNYGPEIDVWSAGVIIY 274
           +   DFGL      G+           G+  + APE+L    +R     ID++S G + Y
Sbjct: 185 ILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY 244
Query: 275 ILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPW---PKVSKEAKELVKNMLDPNPYNRL 330
            +L  G  PF  +        IIRG    +         +  EA +L+  M+D +P  R 
Sbjct: 245 YILSKGKHPFGDKYSR--ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRP 302
Query: 331 TLEEVLENP--WIKN 343
           T  +VL +P  W K+
Sbjct: 303 TAMKVLRHPLFWPKS 317

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 16/218 (7%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D +    ELG G  G+  +     +G   A +K+   ++K  I  + + RE++++ H   
Sbjct: 16  DDFERISELGAGNGGVVTKVQHRPSGLIMA-RKLIHLEIKPAIR-NQIIRELQVL-HECN 72
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
            P IV +  A+     I + ME  +GG L   +       E     V   +LR +    E
Sbjct: 73  SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLRE 132
Query: 201 -NGVMHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPYYMAPEVLR 257
            + +MHRD+KP N L    +   ++K  DFG+S  +       F   VG+  YMAPE L+
Sbjct: 133 KHQIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMAPERLQ 186
Query: 258 -RNYGPEIDVWSAGVIIYILLCG---VPPFWAETEEGI 291
             +Y  + D+WS G+ +  L  G   +PP  A+  E I
Sbjct: 187 GTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAI 224

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 108/255 (42%), Gaps = 38/255 (14%)
Query: 123 IDIDDVR-REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELC--------EGGELFDRI 173
           ID  D+   E++++     HPN++ Y  +      +Y+ +ELC        E   + D  
Sbjct: 67  IDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDE- 125
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA----------DGSENSQ 223
            N     E    ++ + I   V   H   ++HRDLKP+N L +           G+EN +
Sbjct: 126 -NLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLR 184
Query: 224 LKAIDFGLSIFFKPGEQFCEI-----VGSPYYMAPEVL----RRNYGPEIDVWSAGVIIY 274
           +   DFGL      G+           G+  + APE+L    +R     ID++S G + Y
Sbjct: 185 ILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY 244
Query: 275 ILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPW---PKVSKEAKELVKNMLDPNPYNRL 330
            +L  G  PF  +        IIRG    +         +  EA +L+  M+D +P  R 
Sbjct: 245 YILSKGKHPFGDKYSR--ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRP 302
Query: 331 TLEEVLENP--WIKN 343
           T  +VL +P  W K+
Sbjct: 303 TAMKVLRHPLFWPKS 317

>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM COMPLEX Length = 150

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
           +AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           NG +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 101

>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide Length = 154

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 7   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           G +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 67  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 106

>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement Length = 148

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           G +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 100

>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation Mutant, Ef-delta 64 In Complex With Calmodulin Length = 149

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
           +AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DG
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           NG +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 61  NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 101

>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y Length = 449

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
           D L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
            +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYI 401

>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2 Length = 411

Iteration: 1
 Score = 65.5 bits (158), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
           D L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGNG
Sbjct: 266 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 325
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
            +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 326 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 364

>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12) Length = 415

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
           D L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGNG
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
            +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 367

>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A Compact Form Length = 149

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 2   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           G +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 62  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 101

>pdb|1UP5|B Chain B, Chicken Calmodulin Length = 148

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           G +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 100

>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure Of A Calmodulin-Peptide Complex Length = 147

Iteration: 1
 Score = 65.1 bits (157), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           G +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 100

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           D+   GK LG G FG  +  +   ++  +     K+A + LK   TE D+ D+  E+E+M
Sbjct: 28  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-----------VNKGHYTE--- 181
           + + KH NI+    A      +Y+++E    G L + +            N  H  E   
Sbjct: 88  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 182 --RAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
             +   +    + R ++       +HRDL   N L    +E++ +K  DFGL+      +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIHHID 204
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
              +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 205 XXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 253

>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16) Length = 415

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
           D L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGNG
Sbjct: 269 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
            +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 367

>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER Length = 449

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
           D L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
            +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 401

>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1) Length = 449

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
           D L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
            +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 401

>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y F ++LG G F        +  G  YA K+I   +   + D ++ +RE ++ R L  HP
Sbjct: 31  YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE---QQDREEAQREADMHR-LFNHP 86
Query: 143 NI---VTY--KEAYEDKDAIYLVMELCEGGELF---DRIVNKGHY-TERAAAAVGKTILR 193
           NI   V Y  +E     +A +L++   + G L+   +R+ +KG++ TE     +   I R
Sbjct: 87  NILRLVAYCLRERGAKHEA-WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICR 145
Query: 194 IVKVCHENGVMHRDLKPENFLFAD---------GSENSQLKAIDFGLSIFFKP--GEQFC 242
            ++  H  G  HRDLKP N L  D         GS N     ++             Q C
Sbjct: 146 GLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRC 205
Query: 243 EIVGSPYYMAPEVLRRNYGPEI----DVWSAGVIIYILLCGVPPFWAETEEGIAHAI-IR 297
            I     Y APE+        I    DVWS G ++Y ++ G  P+    ++G + A+ ++
Sbjct: 206 TIS----YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ 261
Query: 298 GKIDFERDPWPKVSKEAKELVKNMLDPNPYNR 329
            ++   +   P+ S    +L+ +M+  +P+ R
Sbjct: 262 NQLSIPQS--PRHSSALWQLLNSMMTVDPHQR 291

>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) Length = 450

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
           D L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGNG
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 363
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
            +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 364 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 402

>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER Length = 449

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
           D L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
            +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 363 TIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYI 401

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 17/211 (8%)
Query: 85  FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI----DDVRREVEIMRHLPK 140
           + K++G+G FG+ H+   ++     A K +     + E ++     + +REV IM +L  
Sbjct: 23  YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-N 81
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA--VGKTILRIVKVC 198
           HPNIV       +     +VME    G+L+ R+++K H  + +     +    L I  + 
Sbjct: 82  HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 199 HENG-VMHRDLKPENFLFADGSENSQL--KAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
           ++N  ++HRDL+  N       EN+ +  K  DFG S   +       ++G+  +MAPE 
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVSGLLGNFQWMAPET 197
Query: 256 L---RRNYGPEIDVWSAGVIIYILLCGVPPF 283
           +     +Y  + D +S  +I+Y +L G  PF
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPF 228

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           ELG G  G+  +     +G   A +K+   ++K  I  + + RE++++ H    P IV +
Sbjct: 75  ELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 131
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHR 206
             A+     I + ME  +GG L   +   G   E+    V   +++ +    E + +MHR
Sbjct: 132 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 191
Query: 207 DLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPE 263
           D+KP N L    +   ++K  DFG+S  +       F   VG+  YM+PE L+  +Y  +
Sbjct: 192 DVKPSNILV---NSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQ 245
Query: 264 IDVWSAGVIIYILLCG---VPP 282
            D+WS G+ +  +  G   +PP
Sbjct: 246 SDIWSMGLSLVEMAVGRYPIPP 267

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 29/229 (12%)
Query: 81  DKYTFGKELGRGEFG--ITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           DK T GK LG G FG  +  +   I+  +      +A + LK   TE D+ D+  E+E+M
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----------------VNKGHY 179
           + + KH NI+    A      +Y+++     G L + +                V +   
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           T +   +    + R ++       +HRDL   N L    +EN+ +K  DFGL+      +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINNID 211
Query: 240 QFCEIVGSPY---YMAPEVL-RRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            + +         +MAPE L  R Y  + DVWS GV+++ I   G  P+
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 85  FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           F ++LG+G FG    C     +  TGE  A KK+      TE  + D  RE+EI++ L +
Sbjct: 14  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 69
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
           H NIV YK       +  + L+ME    G L D +  +K              I + ++ 
Sbjct: 70  HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVG---SP-YYMAP 253
                 +HRDL   N L  +    +++K  DFGL+      ++F ++     SP ++ AP
Sbjct: 130 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAP 186
Query: 254 EVLRRN-YGPEIDVWSAGVIIYILLCGV 280
           E L  + +    DVWS GV++Y L   +
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFTYI 214

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 102/211 (48%), Gaps = 17/211 (8%)
Query: 85  FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI----DDVRREVEIMRHLPK 140
           + K++G+G FG+ H+   ++     A K +     + E ++     + +REV IM +L  
Sbjct: 23  YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-N 81
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA--VGKTILRIVKVC 198
           HPNIV       +     +VME    G+L+ R+++K H  + +     +    L I  + 
Sbjct: 82  HPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 199 HENG-VMHRDLKPENFLFADGSENSQL--KAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
           ++N  ++HRDL+  N       EN+ +  K  DF LS   +       ++G+  +MAPE 
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVSGLLGNFQWMAPET 197
Query: 256 L---RRNYGPEIDVWSAGVIIYILLCGVPPF 283
           +     +Y  + D +S  +I+Y +L G  PF
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPF 228

>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The Central Helix Length = 146

Iteration: 1
 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
           G +   EF+TM     +   ++I  +AFR FDK+ +GFI
Sbjct: 61  GTIDFPEFLTMMARKMKDSEEEI-REAFRVFDKDGNGFI 98

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           ELG G  G+  +     +G   A +K+   ++K  I  + + RE++++ H    P IV +
Sbjct: 13  ELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 69
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHR 206
             A+     I + ME  +GG L   +   G   E+    V   +++ +    E + +MHR
Sbjct: 70  YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 207 DLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPE 263
           D+KP N L    +   ++K  DFG+S  +       F   VG+  YM+PE L+  +Y  +
Sbjct: 130 DVKPSNILV---NSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQ 183
Query: 264 IDVWSAGVIIYILLCG---VPP 282
            D+WS G+ +  +  G   +PP
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPP 205

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           ELG G  G+  +     +G   A +K+   ++K  I  + + RE++++ H    P IV +
Sbjct: 40  ELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 96
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHR 206
             A+     I + ME  +GG L   +   G   E+    V   +++ +    E + +MHR
Sbjct: 97  YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 156
Query: 207 DLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPE 263
           D+KP N L    +   ++K  DFG+S  +       F   VG+  YM+PE L+  +Y  +
Sbjct: 157 DVKPSNILV---NSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQ 210
Query: 264 IDVWSAGVIIYILLCG---VPP 282
            D+WS G+ +  +  G   +PP
Sbjct: 211 SDIWSMGLSLVEMAVGRYPIPP 232

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           ELG G  G+  +     +G   A +K+   ++K  I  + + RE++++ H    P IV +
Sbjct: 13  ELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 69
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHR 206
             A+     I + ME  +GG L   +   G   E+    V   +++ +    E + +MHR
Sbjct: 70  YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 207 DLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPE 263
           D+KP N L    +   ++K  DFG+S  +       F   VG+  YM+PE L+  +Y  +
Sbjct: 130 DVKPSNILV---NSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQ 183
Query: 264 IDVWSAGVIIYILLCG---VPP 282
            D+WS G+ +  +  G   +PP
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPP 205

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           ELG G  G+  +     +G   A +K+   ++K  I  + + RE++++ H    P IV +
Sbjct: 13  ELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 69
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHR 206
             A+     I + ME  +GG L   +   G   E+    V   +++ +    E + +MHR
Sbjct: 70  YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 207 DLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPE 263
           D+KP N L    +   ++K  DFG+S  +       F   VG+  YM+PE L+  +Y  +
Sbjct: 130 DVKPSNILV---NSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQ 183
Query: 264 IDVWSAGVIIYILLCG---VPP 282
            D+WS G+ +  +  G   +PP
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPP 205

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
           ELG G  G+  +     +G   A +K+   ++K  I  + + RE++++ H    P IV +
Sbjct: 13  ELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIR-NQIIRELQVL-HECNSPYIVGF 69
Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHR 206
             A+     I + ME  +GG L   +   G   E+    V   +++ +    E + +MHR
Sbjct: 70  YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 207 DLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPE 263
           D+KP N L    +   ++K  DFG+S  +       F   VG+  YM+PE L+  +Y  +
Sbjct: 130 DVKPSNILV---NSRGEIKLCDFGVSGQLIDSMANSF---VGTRSYMSPERLQGTHYSVQ 183
Query: 264 IDVWSAGVIIYILLCG---VPP 282
            D+WS G+ +  +  G   +PP
Sbjct: 184 SDIWSMGLSLVEMAVGRYPIPP 205

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           +D+Y     +G+G FG   + ++    E  A K I  +K      ++  + EV ++  + 
Sbjct: 53  MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----AFLNQAQIEVRLLELMN 108
Query: 140 KHPN-----IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG------HYTERAAAAVG 188
           KH       IV  K  +  ++ + LV E+     L+D + N        + T + A  + 
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN-LYDLLRNTNFRGVSLNLTRKFAQQMC 167
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
             +L +     E  ++H DLKPEN L  +  + S +K +DFG S   + G++  + + S 
Sbjct: 168 TALLFLA--TPELSIIHCDLKPENILLCN-PKRSAIKIVDFGSSC--QLGQRIYQXIQSR 222
Query: 249 YYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
           +Y +PEVL    Y   ID+WS G I+  +  G P F    E
Sbjct: 223 FYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263

>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam Length = 176

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           + NL ++Q+A+ K+ F + D D NG ++  EL   +  +G   S+ +V  LM   DVDGN
Sbjct: 2   SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 61
Query: 438 GLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
             +   EF+  MS  LK   ++  L +AF+ FDKN  G I
Sbjct: 62  HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLI 101

>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam Length = 128

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           + NL ++Q+A+ K+ F + D D NG ++  EL   +  +G   S+ +V  LM   DVDGN
Sbjct: 1   SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 438 GLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
             +   EF+  MS  LK   ++  L +AF+ FDKN  G I
Sbjct: 61  HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLI 100

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           +D+Y     +G+G FG   + ++    E  A K I  +K      ++  + EV ++  + 
Sbjct: 34  MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----AFLNQAQIEVRLLELMN 89
Query: 140 KHPN-----IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG------HYTERAAAAVG 188
           KH       IV  K  +  ++ + LV E+     L+D + N        + T + A  + 
Sbjct: 90  KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN-LYDLLRNTNFRGVSLNLTRKFAQQMC 148
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
             +L +     E  ++H DLKPEN L  +  + S +K +DFG S   + G++  + + S 
Sbjct: 149 TALLFLA--TPELSIIHCDLKPENILLCN-PKRSAIKIVDFGSSC--QLGQRIYQXIQSR 203
Query: 249 YYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
           +Y +PEVL    Y   ID+WS G I+  +  G P F    E
Sbjct: 204 FYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 244

>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide Complex Length = 148

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L  +Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 1   ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
           G +   EF+  M+  +K   +++ L +AFR FDK+ +GFI
Sbjct: 61  GTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFI 100

>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 148

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L  +Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 1   ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
           G +   EF+  M+  +K   +++ L +AFR FDK+ +GFI
Sbjct: 61  GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFI 100

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 94/225 (41%), Gaps = 33/225 (14%)
Query: 85  FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRHLPKH 141
           FGK LG G FG   +      G+  A  K+A + LK+    D+   +  E++IM HL +H
Sbjct: 50  FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTER-AAAAVGKTILRIVKVCH- 199
            NIV    A      + ++ E C  G+L + +  K    E   A A+  + L    + H 
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 200 ------------ENGVMHRDLKPENFLFADGSENSQLKAIDFGL-------SIFFKPGEQ 240
                           +HRD+   N L  +G      K  DFGL       S +   G  
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIMNDSNYIVKGNA 226
Query: 241 FCEIVGSPYYMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
              +     +MAPE +    Y  + DVWS G++++ I   G+ P+
Sbjct: 227 RLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267

>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1), Lp(Linker 2) Length = 448

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
           + D L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DG
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           +G +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYI 400

>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Length = 448

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 62/101 (61%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
           + D L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DG
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 359
Query: 437 NGLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           +G +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 360 DGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYI 400

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 21/260 (8%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 14  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 68
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y++ E    G L D  R  N+   +      +   I   ++   + 
Sbjct: 69  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+ F    G+ +   + APE L  
Sbjct: 129 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPESLAY 184
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE-AK 315
           N +  + DVW+ GV+++ I   G+ P+    +    + ++      ER   P+   E   
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPY-PGIDPSQVYELLEKDYRMER---PEGCPEKVY 240
Query: 316 ELVKNMLDPNPYNRLTLEEV 335
           EL++     NP +R +  E+
Sbjct: 241 ELMRACWQWNPSDRPSFAEI 260

>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp) From Human Epithelial Cells Length = 148

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+ + K+ F + D D +G +T  EL   +  +GQ  ++ +++ +M   D DGN
Sbjct: 1   ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGN 60
Query: 438 GLLSCDEFV-TMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
           G +   EF+  M+  +K   N++ + +AFR FDK+ +GF+
Sbjct: 61  GTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFV 100

>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y Length = 449

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
           D L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DG+G
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 362
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
            +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYI 401

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 108/259 (41%), Gaps = 42/259 (16%)
Query: 123 IDIDDVR-REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELC--------EGGELFDRI 173
           ID  D+   E++++     HPN++ Y  +      +Y+ +ELC        E   + D  
Sbjct: 49  IDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDE- 107
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA----------DGSENSQ 223
            N     E    ++ + I   V   H   ++HRDLKP+N L +           G+EN +
Sbjct: 108 -NLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLR 166
Query: 224 LKAIDFGLSIFFKPGEQFCEI-----VGSPYYMAPEVL--------RRNYGPEIDVWSAG 270
           +   DFGL      G+           G+  + APE+L        +R     ID++S G
Sbjct: 167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG 226
Query: 271 VIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPW---PKVSKEAKELVKNMLDPNP 326
            + Y +L  G  PF  +        IIRG    +         +  EA +L+  M+D +P
Sbjct: 227 CVFYYILSKGKHPFGDKYSR--ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDP 284
Query: 327 YNRLTLEEVLENP--WIKN 343
             R T  +VL +P  W K+
Sbjct: 285 LKRPTAMKVLRHPLFWPKS 303

>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces Cerevisiae Length = 146

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGL 439
           NL ++Q+A+ K+ F + D D NG ++  EL   +  +G   S+ +V  LM   DVDGN  
Sbjct: 3   NLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQ 62
Query: 440 LSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
           +   EF+  MS  LK   ++  L +AF+ FDKN  G I
Sbjct: 63  IEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLI 100

>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p Length = 148

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DG+
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           G +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 100

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 122/271 (45%), Gaps = 20/271 (7%)
Query: 85  FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNI 144
           F  E+GRG F   ++  + ET    A  ++   KL T+ +    + E E ++ L +HPNI
Sbjct: 30  FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEXLKGL-QHPNI 87
Query: 145 VTYKEAYED----KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           V + +++E     K  I LV EL   G L   +        +   +  + IL+ ++  H 
Sbjct: 88  VRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHT 147
Query: 201 NG--VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYYMAPEVLR 257
               ++HRDLK +N +F  G   S +K  D GL+   +    F + ++G+P + APE   
Sbjct: 148 RTPPIIHRDLKCDN-IFITGPTGS-VKIGDLGLATLKRAS--FAKAVIGTPEFXAPEXYE 203
Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPFW-AETEEGIAHAIIRG--KIDFERDPWPKVSKEA 314
             Y   +DV++ G           P+   +    I   +  G     F++   P    E 
Sbjct: 204 EKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIP----EV 259
Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           KE+++  +  N   R +++++L + + + + 
Sbjct: 260 KEIIEGCIRQNKDERYSIKDLLNHAFFQEET 290

>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin V Length = 145

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
           D L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGNG
Sbjct: 1   DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
            +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 61  TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 99

>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium Indicator Rcamp Length = 440

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Query: 364 SIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDP 423
           ++M K K K      D L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ 
Sbjct: 280 AVMQK-KTKGWEPTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEA 338
Query: 424 DVKMLMEAADVDGNGLLSCDEF-VTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
           +++ ++   D DG+G +   EF + M+  +K   +++ + +AFR FDK+ +G+I
Sbjct: 339 ELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYI 392

>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 448

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
           D L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DG+G
Sbjct: 302 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 361
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
            +   EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 362 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 400

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 108/259 (41%), Gaps = 42/259 (16%)
Query: 123 IDIDDVR-REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELC--------EGGELFDRI 173
           ID  D+   E++++     HPN++ Y  +      +Y+ +ELC        E   + D  
Sbjct: 49  IDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDE- 107
Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA----------DGSENSQ 223
            N     E    ++ + I   V   H   ++HRDLKP+N L +           G+EN +
Sbjct: 108 -NLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLR 166
Query: 224 LKAIDFGLSIFFKPGEQFCEI-----VGSPYYMAPEVL--------RRNYGPEIDVWSAG 270
           +   DFGL      G+           G+  + APE+L        +R     ID++S G
Sbjct: 167 ILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMG 226
Query: 271 VIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPW---PKVSKEAKELVKNMLDPNP 326
            + Y +L  G  PF  +        IIRG    +         +  EA +L+  M+D +P
Sbjct: 227 CVFYYILSKGKHPFGDKYSR--ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDP 284
Query: 327 YNRLTLEEVLENP--WIKN 343
             R T  +VL +P  W K+
Sbjct: 285 LKRPTAMKVLRHPLFWPKS 303

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 33/222 (14%)
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI---VKVCH 199
           N V   +    K  +Y+ M+LC    L D +  +    +R         ++I   V+  H
Sbjct: 122 NTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH 181
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI-------------VG 246
             G+MHRDLKP N  F   + +  +K  DFGL       E+   +             VG
Sbjct: 182 SKGLMHRDLKPSNIFF---TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVG 238
Query: 247 SPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD 305
           +  YM+PE +   NY  ++D++S G+I++ LL     F  + E       +R   D    
Sbjct: 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS---FSTQMER------VRIITDVRNL 289
Query: 306 PWPKV--SKEAKE--LVKNMLDPNPYNRLTLEEVLENPWIKN 343
            +P +   K  +E  +V++ML P+P  R    +++EN   +N
Sbjct: 290 KFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN 331

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 85  FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           F ++LG+G FG    C     +  TGE  A KK+      TE  + D  RE+EI++ L +
Sbjct: 17  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 72
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
           H NIV YK       +  + L+ME    G L D +  + H        + +   +I K  
Sbjct: 73  HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QAHAERIDHIKLLQYTSQICKGM 130
Query: 199 HENGV---MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YY 250
              G    +HRDL   N L  +    +++K  DFGL+    P ++    V  P     ++
Sbjct: 131 EYLGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFW 186
Query: 251 MAPEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
            APE L  + +    DVWS GV++Y L   +
Sbjct: 187 YAPESLTESKFSVASDVWSFGVVLYELFTYI 217

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85  FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           F ++LG+G FG    C     +  TGE  A KK+      TE  + D  RE+EI++ L +
Sbjct: 14  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 69
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
           H NIV YK       +  + L+ME    G L D +  +K              I + ++ 
Sbjct: 70  HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
                 +HRDL   N L  +    +++K  DFGL+    P ++    V  P     ++ A
Sbjct: 130 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 185
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
           PE L  + +    DVWS GV++Y L   +
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTYI 214

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85  FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           F ++LG+G FG    C     +  TGE  A KK+      TE  + D  RE+EI++ L +
Sbjct: 45  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 100
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
           H NIV YK       +  + L+ME    G L D +  +K              I + ++ 
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 160
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
                 +HRDL   N L  +    +++K  DFGL+    P ++    V  P     ++ A
Sbjct: 161 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 216
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
           PE L  + +    DVWS GV++Y L   +
Sbjct: 217 PESLTESKFSVASDVWSFGVVLYELFTYI 245

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85  FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           F ++LG+G FG    C     +  TGE  A KK+      TE  + D  RE+EI++ L +
Sbjct: 21  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 76
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
           H NIV YK       +  + L+ME    G L D +  +K              I + ++ 
Sbjct: 77  HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 136
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
                 +HRDL   N L  +    +++K  DFGL+    P ++    V  P     ++ A
Sbjct: 137 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 192
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
           PE L  + +    DVWS GV++Y L   +
Sbjct: 193 PESLTESKFSVASDVWSFGVVLYELFTYI 221

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85  FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           F ++LG+G FG    C     +  TGE  A KK+      TE  + D  RE+EI++ L +
Sbjct: 14  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 69
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
           H NIV YK       +  + L+ME    G L D +  +K              I + ++ 
Sbjct: 70  HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
                 +HRDL   N L  +    +++K  DFGL+    P ++    V  P     ++ A
Sbjct: 130 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 185
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
           PE L  + +    DVWS GV++Y L   +
Sbjct: 186 PESLTESKFSVASDVWSFGVVLYELFTYI 214

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85  FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           F ++LG+G FG    C     +  TGE  A KK+      TE  + D  RE+EI++ L +
Sbjct: 18  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 73
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
           H NIV YK       +  + L+ME    G L D +  +K              I + ++ 
Sbjct: 74  HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 133
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
                 +HRDL   N L  +    +++K  DFGL+    P ++    V  P     ++ A
Sbjct: 134 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 189
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
           PE L  + +    DVWS GV++Y L   +
Sbjct: 190 PESLTESKFSVASDVWSFGVVLYELFTYI 218

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85  FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           F ++LG+G FG    C     +  TGE  A KK+      TE  + D  RE+EI++ L +
Sbjct: 13  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 68
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
           H NIV YK       +  + L+ME    G L D +  +K              I + ++ 
Sbjct: 69  HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 128
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
                 +HRDL   N L  +    +++K  DFGL+    P ++    V  P     ++ A
Sbjct: 129 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 184
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
           PE L  + +    DVWS GV++Y L   +
Sbjct: 185 PESLTESKFSVASDVWSFGVVLYELFTYI 213

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85  FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           F ++LG+G FG    C     +  TGE  A KK+      TE  + D  RE+EI++ L +
Sbjct: 17  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 72
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
           H NIV YK       +  + L+ME    G L D +  +K              I + ++ 
Sbjct: 73  HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
                 +HRDL   N L  +    +++K  DFGL+    P ++    V  P     ++ A
Sbjct: 133 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 188
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
           PE L  + +    DVWS GV++Y L   +
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFTYI 217

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85  FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           F ++LG+G FG    C     +  TGE  A KK+      TE  + D  RE+EI++ L +
Sbjct: 19  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 74
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
           H NIV YK       +  + L+ME    G L D +  +K              I + ++ 
Sbjct: 75  HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 134
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
                 +HRDL   N L  +    +++K  DFGL+    P ++    V  P     ++ A
Sbjct: 135 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 190
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
           PE L  + +    DVWS GV++Y L   +
Sbjct: 191 PESLTESKFSVASDVWSFGVVLYELFTYI 219

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85  FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           F ++LG+G FG    C     +  TGE  A KK+      TE  + D  RE+EI++ L +
Sbjct: 20  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 75
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
           H NIV YK       +  + L+ME    G L D +  +K              I + ++ 
Sbjct: 76  HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 135
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
                 +HRDL   N L  +    +++K  DFGL+    P ++    V  P     ++ A
Sbjct: 136 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 191
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
           PE L  + +    DVWS GV++Y L   +
Sbjct: 192 PESLTESKFSVASDVWSFGVVLYELFTYI 220

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 16/207 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 16  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 70
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y+++E    G L D  R  N+   +      +   I   ++   + 
Sbjct: 71  LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+ +    G+ +   + APE L  
Sbjct: 131 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 186
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
           N +  + DVW+ GV+++ I   G+ P+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPY 213

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 22/221 (9%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           +D+Y     +G+G FG   + ++    E  A K I  +K      ++  + EV ++  + 
Sbjct: 53  MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK----AFLNQAQIEVRLLELMN 108
Query: 140 KHPN-----IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG------HYTERAAAAVG 188
           KH       IV  K  +  ++ + LV E+     L+D + N        + T + A  + 
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYN-LYDLLRNTNFRGVSLNLTRKFAQQMC 167
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
             +L +     E  ++H DLKPEN L  +  +   +K +DFG S   + G++  + + S 
Sbjct: 168 TALLFLA--TPELSIIHCDLKPENILLCN-PKRXAIKIVDFGSSC--QLGQRIYQXIQSR 222
Query: 249 YYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
           +Y +PEVL    Y   ID+WS G I+  +  G P F    E
Sbjct: 223 FYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85  FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           F ++LG+G FG    C     +  TGE  A KK+      TE  + D  RE+EI++ L +
Sbjct: 32  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-Q 87
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
           H NIV YK       +  + L+ME    G L D +  +K              I + ++ 
Sbjct: 88  HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
                 +HRDL   N L  +    +++K  DFGL+    P ++    V  P     ++ A
Sbjct: 148 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 203
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
           PE L  + +    DVWS GV++Y L   +
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFTYI 232

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 62.8 bits (151), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 96/207 (46%), Gaps = 16/207 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 16  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 70
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y+++E    G L D  R  N+   +      +   I   ++   + 
Sbjct: 71  LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+ +    G+ +   + APE L  
Sbjct: 131 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 186
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
           N +  + DVW+ GV+++ I   G+ P+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPY 213

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85  FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           F ++LG+G FG    C     +  TGE  A KK+      TE  + D  RE+EI++ L +
Sbjct: 12  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 67
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
           H NIV YK       +  + L+ME    G L D +  +K              I + ++ 
Sbjct: 68  HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 127
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
                 +HRDL   N L  +    +++K  DFGL+    P ++    V  P     ++ A
Sbjct: 128 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 183
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
           PE L  + +    DVWS GV++Y L   +
Sbjct: 184 PESLTESKFSVASDVWSFGVVLYELFTYI 212

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85  FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           F ++LG+G FG    C     +  TGE  A KK+      TE  + D  RE+EI++ L +
Sbjct: 32  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 87
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
           H NIV YK       +  + L+ME    G L D +  +K              I + ++ 
Sbjct: 88  HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
                 +HRDL   N L  +    +++K  DFGL+    P ++    V  P     ++ A
Sbjct: 148 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 203
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
           PE L  + +    DVWS GV++Y L   +
Sbjct: 204 PESLTESKFSVASDVWSFGVVLYELFTYI 232

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 21  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 75
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y++ E    G L D  R  N+   +      +   I   ++   + 
Sbjct: 76  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 135
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+ +    G+ +   + APE L  
Sbjct: 136 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 191
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
           N +  + DVW+ GV+++ I   G+ P+
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPY 218

>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4 Complexed With The Vacuolar Calcium Atpase Bca1 Peptide Length = 149

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+   K+ F + D D +G +T EEL   +  + Q  ++ +++ ++   D DGN
Sbjct: 1   ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 438 GLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
           G +  DEF++ M+  +K    ++ L +AF+ FDK+Q+G+I
Sbjct: 61  GTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYI 100

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 16  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 70
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y++ E    G L D  R  N+   +      +   I   ++   + 
Sbjct: 71  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+ +    G+ +   + APE L  
Sbjct: 131 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 186
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
           N +  + DVW+ GV+++ I   G+ P+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPY 213

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 21  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 75
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y+++E    G L D  R  N+          +   I   ++   + 
Sbjct: 76  LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+ +    G+ +   + APE L  
Sbjct: 136 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 191
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
           N +  + DVW+ GV+++ I   G+ P+
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPY 218

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 21/209 (10%)
Query: 85  FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           F ++LG+G FG    C     +  TGE  A KK+      TE  + D  RE+EI++ L +
Sbjct: 17  FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 72
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
           H NIV YK       +  + L+ME    G L + +  +K              I + ++ 
Sbjct: 73  HDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
                 +HRDL   N L  +    +++K  DFGL+    P ++    V  P     ++ A
Sbjct: 133 LGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYA 188
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGV 280
           PE L  + +    DVWS GV++Y L   +
Sbjct: 189 PESLTESKFSVASDVWSFGVVLYELFTYI 217

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 16  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 70
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y++ E    G L D  R  N+   +      +   I   ++   + 
Sbjct: 71  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+ +    G+ +   + APE L  
Sbjct: 131 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 186
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
           N +  + DVW+ GV+++ I   G+ P+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPY 213

>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular Recognition On The Basis Of X-Ray Structures Length = 144

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGNG +
Sbjct: 1   LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 441 SCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
              EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 61  DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 97

>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide Length = 146

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGNG +
Sbjct: 2   LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 441 SCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
              EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 62  DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 98

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 85  FGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           F ++LG+G FG    C     +  TGE  A KK+      TE  + D  RE+EI++ L +
Sbjct: 15  FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSL-Q 70
Query: 141 HPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKV 197
           H NIV YK       +  + L+ME    G L D +  +K              I + ++ 
Sbjct: 71  HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 130
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVG---SP-YYMAP 253
                 +HR+L   N L  +    +++K  DFGL+      +++ ++     SP ++ AP
Sbjct: 131 LGTKRYIHRNLATRNILVEN---ENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAP 187
Query: 254 EVLRRN-YGPEIDVWSAGVIIYILLCGV 280
           E L  + +    DVWS GV++Y L   +
Sbjct: 188 ESLTESKFSVASDVWSFGVVLYELFTYI 215

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 93/225 (41%), Gaps = 33/225 (14%)
Query: 85  FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRHLPKH 141
           FGK LG G FG   +      G+  A  K+A + LK+    D+   +  E++IM HL +H
Sbjct: 50  FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTER-AAAAVGKTILRIVKVCH- 199
            NIV    A      + ++ E C  G+L + +  K    E   A A+  +      + H 
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 200 ------------ENGVMHRDLKPENFLFADGSENSQLKAIDFGL-------SIFFKPGEQ 240
                           +HRD+   N L  +G      K  DFGL       S +   G  
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIMNDSNYIVKGNA 226
Query: 241 FCEIVGSPYYMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
              +     +MAPE +    Y  + DVWS G++++ I   G+ P+
Sbjct: 227 RLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 17  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 71
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y++ E    G L D  R  N+          +   I   ++   + 
Sbjct: 72  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+ +    G+ +   + APE L  
Sbjct: 132 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAY 187
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
           N +  + DVW+ GV+++ I   G+ P+
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSPY 214

>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX Length = 144

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGNG +
Sbjct: 2   LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 441 SCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
              EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 62  DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 98

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 277
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y++ E    G L D  R  N+   +      +   I   ++   + 
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 337
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HR+L   N L     EN  +K  DFGLS     G+ +    G+ +   + APE L  
Sbjct: 338 NFIHRNLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 393
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
           N +  + DVW+ GV+++ I   G+ P+
Sbjct: 394 NKFSIKSDVWAFGVLLWEIATYGMSPY 420

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 21  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 75
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y++ E    G L D  R  N+          +   I   ++   + 
Sbjct: 76  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+ +    G+ +   + APE L  
Sbjct: 136 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 191
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
           N +  + DVW+ GV+++ I   G+ P+
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPY 218

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 18  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 72
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y++ E    G L D  R  N+          +   I   ++   + 
Sbjct: 73  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+ +    G+ +   + APE L  
Sbjct: 133 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAY 188
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
           N +  + DVW+ GV+++ I   G+ P+
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPY 215

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 21/260 (8%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G+FG  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 14  TMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 68
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y++ E    G L D  R  N+   +      +   I   ++   + 
Sbjct: 69  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+      G+ +   + APE L  
Sbjct: 129 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAY 184
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE-AK 315
           N +  + DVW+ GV+++ I   G+ P+    +    + ++      ER   P+   E   
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPY-PGIDPSQVYELLEKDYRMER---PEGCPEKVY 240
Query: 316 ELVKNMLDPNPYNRLTLEEV 335
           EL++     NP +R +  E+
Sbjct: 241 ELMRACWQWNPSDRPSFAEI 260

>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The C-Terminal Fragment Of Spindle Pole Body Protein Spc110 Length = 147

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
           ++ NL ++Q+A+ K+ F + D D +G ++  EL   +  +G   S+ +V  LM   DVDG
Sbjct: 1   MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDG 60
Query: 437 NGLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
           N  +   EF+  MS  LK   ++  L +AF+ FDKN  G I
Sbjct: 61  NHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLI 101

>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/200 (28%), Positives = 83/200 (41%), Gaps = 26/200 (13%)
Query: 141 HPNIVTYKEAYEDKD-----AIYLVMELCEGGELFDRIVNKGHYTERA-AAAVGKTILRI 194
           HP+IV      E  D       Y+VME   GG+   R  +KG     A A A    IL  
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYV-GGQSLKR--SKGQKLPVAEAIAYLLEILPA 194
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +   H  G+++ DLKPEN +  +     QLK ID G          F  + G+P + APE
Sbjct: 195 LSYLHSIGLVYNDLKPENIMLTE----EQLKLIDLGAVSRIN---SFGYLYGTPGFQAPE 247
Query: 255 VLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           ++R       D+++ G  +  L   +P       +G+           E DP  K     
Sbjct: 248 IVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLP----------EDDPVLKTYDSY 297
Query: 315 KELVKNMLDPNPYNRLTLEE 334
             L++  +DP+P  R T  E
Sbjct: 298 GRLLRRAIDPDPRQRFTTAE 317

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 18  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 72
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y++ E    G L D  R  N+          +   I   ++   + 
Sbjct: 73  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+ +    G+ +   + APE L  
Sbjct: 133 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 188
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
           N +  + DVW+ GV+++ I   G+ P+
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPY 215

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 21  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 75
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y++ E    G L D  R  N+          +   I   ++   + 
Sbjct: 76  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+ +    G+ +   + APE L  
Sbjct: 136 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 191
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
           N +  + DVW+ GV+++ I   G+ P+
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPY 218

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 29  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 83
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y++ E    G L D  R  N+          +   I   ++   + 
Sbjct: 84  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 143
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+ +    G+ +   + APE L  
Sbjct: 144 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 199
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
           N +  + DVW+ GV+++ I   G+ P+
Sbjct: 200 NKFSIKSDVWAFGVLLWEIATYGMSPY 226

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 18  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 72
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y++ E    G L D  R  N+          +   I   ++   + 
Sbjct: 73  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+ +    G+ +   + APE L  
Sbjct: 133 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 188
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
           N +  + DVW+ GV+++ I   G+ P+
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPY 215

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 20  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 74
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y++ E    G L D  R  N+          +   I   ++   + 
Sbjct: 75  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 134
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+ +    G+ +   + APE L  
Sbjct: 135 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 190
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
           N +  + DVW+ GV+++ I   G+ P+
Sbjct: 191 NKFSIKSDVWAFGVLLWEIATYGMSPY 217

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 122/281 (43%), Gaps = 47/281 (16%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKI-----AKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           E+GRG +G  ++     +G+  A K+I      KE+ +  +D+D V R  +        P
Sbjct: 29  EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDC-------P 81
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAA---VGKTILRIVKVCH 199
            IV +  A   +   ++ MEL      FD+     +           +GK  L  VK  +
Sbjct: 82  YIVQFYGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139
Query: 200 ---EN-GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
              EN  ++HRD+KP N L  D S N  +K  DFG+S             G   YMAPE 
Sbjct: 140 HLKENLKIIHRDIKPSNILL-DRSGN--IKLCDFGISGQLVDSIAKTRDAGCRPYMAPER 196
Query: 256 L-----RRNYGPEIDVWSAGVIIYILLCGVPPF--WAETEEGIAHAIIRGKIDFERDPWP 308
           +     R+ Y    DVWS G+ +Y L  G  P+  W    + +   +++G      DP P
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQ-VVKG------DP-P 248
Query: 309 KVS-KEAKE-------LVKNMLDPNPYNRLTLEEVLENPWI 341
           ++S  E +E        V   L  +   R   +E+L++P+I
Sbjct: 249 QLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 115/260 (44%), Gaps = 21/260 (8%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 14  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 68
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y+++E    G L D  R  N+   +      +   I   ++   + 
Sbjct: 69  LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+      G+ +   + APE L  
Sbjct: 129 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAY 184
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE-AK 315
           N +  + DVW+ GV+++ I   G+ P+    +    + ++      ER   P+   E   
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPY-PGIDPSQVYELLEKDYRMER---PEGCPEKVY 240
Query: 316 ELVKNMLDPNPYNRLTLEEV 335
           EL++     NP +R +  E+
Sbjct: 241 ELMRACWQWNPSDRPSFAEI 260

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 16  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 70
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y++ E    G L D  R  N+          +   I   ++   + 
Sbjct: 71  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+ +    G+ +   + APE L  
Sbjct: 131 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 186
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
           N +  + DVW+ GV+++ I   G+ P+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPY 213

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  +     +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 35  TMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 89
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y+V E    G L D  R  N+   T      +   I   ++   + 
Sbjct: 90  LVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK 149
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+ +    G+ +   + APE L  
Sbjct: 150 NFIHRDLAARNCLVG---ENHVVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 205
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
           N +  + DVW+ GV+++ I   G+ P+
Sbjct: 206 NTFSIKSDVWAFGVLLWEIATYGMSPY 232

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 16  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 70
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y++ E    G L D  R  N+          +   I   ++   + 
Sbjct: 71  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+ +    G+ +   + APE L  
Sbjct: 131 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 186
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
           N +  + DVW+ GV+++ I   G+ P+
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPY 213

>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 145

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L  +Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGNG +
Sbjct: 1   LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 441 SCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
              EF+  M+  +K   +++ L +AFR FDK+ +GFI
Sbjct: 61  DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFI 97

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 262 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 316
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y++ E    G L D  R  N+          +   I   ++   + 
Sbjct: 317 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 376
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HR+L   N L     EN  +K  DFGLS     G+ +    G+ +   + APE L  
Sbjct: 377 NFIHRNLAARNCLVG---ENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 432
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
           N +  + DVW+ GV+++ I   G+ P+
Sbjct: 433 NKFSIKSDVWAFGVLLWEIATYGMSPY 459

>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin And Pyrophosphate Length = 146

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSC 442
           ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGNG +  
Sbjct: 4   EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 443 DEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
            EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 64  PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 98

>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The Crystal Structure Length = 142

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 57/94 (60%)
Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSC 442
           ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGNG +  
Sbjct: 2   EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 443 DEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
            EF+TM     +  + + + +AFR FDK+ +G+I
Sbjct: 62  PEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYI 95

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 94/212 (44%), Gaps = 43/212 (20%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMRHLP 139
             G+++GRG FG      E+ +G   A   +   K   E    D++    +E  I++   
Sbjct: 117 VLGEQIGRGNFG------EVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY- 169
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV---- 195
            HPNIV        K  IY+VMEL +GG+    +  +G      A    KT+L++V    
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG------ARLRVKTLLQMVGDAA 223
Query: 196 ---KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS------IFFKPGEQFCEIVG 246
              +       +HRDL   N L    +E + LK  DFG+S      ++   G     +  
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLV---TEKNVLKISDFGMSREEADGVYAASG----GLRQ 276
Query: 247 SPY-YMAPEVLRRNYG---PEIDVWSAGVIIY 274
            P  + APE L  NYG    E DVWS G++++
Sbjct: 277 VPVKWTAPEAL--NYGRYSSESDVWSFGILLW 306

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 106/255 (41%), Gaps = 47/255 (18%)
Query: 128 VRREVEIMRHLPKHPNIVTYKEAYEDKD-----AIYLVMELCE---GGELFD-RIVNKGH 178
           V RE+ ++ H   HPNI+  ++ +   +      +YLV EL        + D RIV    
Sbjct: 76  VLREIRLLNHF-HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ 134
Query: 179 YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG 238
           + +         IL  + V HE GV+HRDL P N L AD   N+ +   DF L+      
Sbjct: 135 HIQ----YFMYHILLGLHVLHEAGVVHRDLHPGNILLAD---NNDITICDFNLAREDTAD 187
Query: 239 EQFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAET----EEGIA 292
                 V   +Y APE++   + +   +D+WSAG ++  +      F   T       I 
Sbjct: 188 ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247
Query: 293 HAIIRGKI------------DFERD--------PW----PKVSKEAKELVKNMLDPNPYN 328
             +   KI            D+ R+         W    P     A +L+  ML+ NP  
Sbjct: 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQR 307
Query: 329 RLTLEEVLENPWIKN 343
           R++ E+ L +P+ ++
Sbjct: 308 RISTEQALRHPYFES 322

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 106/255 (41%), Gaps = 47/255 (18%)
Query: 128 VRREVEIMRHLPKHPNIVTYKEAYEDKD-----AIYLVMELCE---GGELFD-RIVNKGH 178
           V RE+ ++ H   HPNI+  ++ +   +      +YLV EL        + D RIV    
Sbjct: 76  VLREIRLLNHF-HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQ 134
Query: 179 YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG 238
           + +         IL  + V HE GV+HRDL P N L AD   N+ +   DF L+      
Sbjct: 135 HIQ----YFMYHILLGLHVLHEAGVVHRDLHPGNILLAD---NNDITICDFNLAREDTAD 187
Query: 239 EQFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAET----EEGIA 292
                 V   +Y APE++   + +   +D+WSAG ++  +      F   T       I 
Sbjct: 188 ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247
Query: 293 HAIIRGKI------------DFERD--------PW----PKVSKEAKELVKNMLDPNPYN 328
             +   KI            D+ R+         W    P     A +L+  ML+ NP  
Sbjct: 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQR 307
Query: 329 RLTLEEVLENPWIKN 343
           R++ E+ L +P+ ++
Sbjct: 308 RISTEQALRHPYFES 322

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 17  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 71
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y+++E    G L D  R  N+          +   I   ++   + 
Sbjct: 72  LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+      G+ +   + APE L  
Sbjct: 132 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAY 187
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
           N +  + DVW+ GV+++ I   G+ P+
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSPY 214

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 35/208 (16%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMRHLP 139
             G+++GRG FG      E+ +G   A   +   K   E    D++    +E  I++   
Sbjct: 117 VLGEQIGRGNFG------EVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY- 169
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV---- 195
            HPNIV        K  IY+VMEL +GG+    +  +G      A    KT+L++V    
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG------ARLRVKTLLQMVGDAA 223
Query: 196 ---KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE--IVGSPY- 249
              +       +HRDL   N L    +E + LK  DFG+S     G       +   P  
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLV---TEKNVLKISDFGMSREEADGVXAASGGLRQVPVK 280
Query: 250 YMAPEVLRRNYG---PEIDVWSAGVIIY 274
           + APE L  NYG    E DVWS G++++
Sbjct: 281 WTAPEAL--NYGRYSSESDVWSFGILLW 306

>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax Edema Factor (Ef) In Complex With Calmodulin Length = 144

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSC 442
           ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGNG +  
Sbjct: 2   EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 443 DEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
            EF+TM    +K   +++ + +AFR FDK+ +G+I
Sbjct: 62  PEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYI 96

>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin In The Presence Of 10 Millimolar Exogenously Added Calcium Chloride Length = 149

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL      +GQ  ++ +++  +   D DGN
Sbjct: 2   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 61
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           G +   EF+T      K   +++ + +AFR FDK+ +G+I
Sbjct: 62  GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYI 101

>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase Peptide Bound To Calmodulin Length = 148

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL      +GQ  ++ +++  +   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 60
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
           G +   EF+T      K   +++ + +AFR FDK+ +G+I
Sbjct: 61  GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYI 100

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
           ++   G+ +G G+FG  HQ   +          I   K  T    D VR    +E   MR
Sbjct: 15  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS---DSVREKFLQEALTMR 71
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
               HP+IV       + + ++++MELC  GEL   +  + +  + A+  +    L    
Sbjct: 72  QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 129
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
              E+   +HRD+   N L    S N  +K  DFGLS + +    +    G  P  +MAP
Sbjct: 130 AYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 186
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
           E +  R +    DVW  GV ++ IL+ GV PF     +G+ +  + G+I+  ER P P
Sbjct: 187 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 239

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
           ++   G+ +G G+FG  HQ   +          I   K  T    D VR    +E   MR
Sbjct: 38  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS---DSVREKFLQEALTMR 94
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
               HP+IV       + + ++++MELC  GEL   +  + +  + A+  +    L    
Sbjct: 95  QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 152
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
              E+   +HRD+   N L    S N  +K  DFGLS + +    +    G  P  +MAP
Sbjct: 153 AYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 209
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
           E +  R +    DVW  GV ++ IL+ GV PF     +G+ +  + G+I+  ER P P
Sbjct: 210 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 262

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 107/248 (43%), Gaps = 26/248 (10%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRHLPKHPNIV 145
           +G GEFG   +      G+  +C  +A + LK   TE    +   E  IM    +HPNI+
Sbjct: 22  IGAGEFGEVCRGRLKAPGKKESC--VAIKTLKGGYTERQRREFLSEASIMGQF-EHPNII 78
Query: 146 TYKEAYEDKDAIYLVMELCEGGEL--FDRIVNKGHYTERAAAAVGKTILRIVKVCHENGV 203
             +    +   + ++ E  E G L  F R+ N G +T      + + I   ++   E   
Sbjct: 79  RLEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGMLRGIASGMRYLAEMSY 137
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPY---YMAPEVLR 257
           +HRDL   N L    + N   K  DFGLS F +       +   +G      + APE + 
Sbjct: 138 VHRDLAARNILV---NSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIA 194
Query: 258 -RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
            R +    D WS G++++ ++  G  P+W  + + + +AI   + D+   P P       
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI---EQDYRLPPPPDCPTSLH 251
Query: 316 ELVKNMLD 323
           +L   MLD
Sbjct: 252 QL---MLD 256

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 107/248 (43%), Gaps = 26/248 (10%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRHLPKHPNIV 145
           +G GEFG   +      G+  +C  +A + LK   TE    +   E  IM    +HPNI+
Sbjct: 24  IGAGEFGEVCRGRLKAPGKKESC--VAIKTLKGGYTERQRREFLSEASIMGQF-EHPNII 80
Query: 146 TYKEAYEDKDAIYLVMELCEGGEL--FDRIVNKGHYTERAAAAVGKTILRIVKVCHENGV 203
             +    +   + ++ E  E G L  F R+ N G +T      + + I   ++   E   
Sbjct: 81  RLEGVVTNSMPVMILTEFMENGALDSFLRL-NDGQFTVIQLVGMLRGIASGMRYLAEMSY 139
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-----PGEQFCEIVGSPY-YMAPEVLR 257
           +HRDL   N L    + N   K  DFGLS F +     P E        P  + APE + 
Sbjct: 140 VHRDLAARNILV---NSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 258 -RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
            R +    D WS G++++ ++  G  P+W  + + + +AI   + D+   P P       
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAI---EQDYRLPPPPDCPTSLH 253
Query: 316 ELVKNMLD 323
           +L   MLD
Sbjct: 254 QL---MLD 258

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
           ++   G+ +G G+FG  HQ   +          I   K  T    D VR    +E   MR
Sbjct: 13  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS---DSVREKFLQEALTMR 69
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
               HP+IV       + + ++++MELC  GEL   +  + +  + A+  +    L    
Sbjct: 70  QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 127
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
              E+   +HRD+   N L    S N  +K  DFGLS + +    +    G  P  +MAP
Sbjct: 128 AYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 184
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
           E +  R +    DVW  GV ++ IL+ GV PF     +G+ +  + G+I+  ER P P
Sbjct: 185 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 237

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 114/277 (41%), Gaps = 49/277 (17%)
Query: 89  LGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLPKH 141
           +G GEFG      E+ +G      K    +A + LK   TE    D   E  IM     H
Sbjct: 41  IGAGEFG------EVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-DH 93
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGEL--FDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           PN++  +        + ++ E  E G L  F R  N G +T      + + I   +K   
Sbjct: 94  PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAAGMKYLA 152
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK---PGEQFCEIVGSPY---YMAP 253
           +   +HRDL   N L    + N   K  DFGLS F +       +   +G      + AP
Sbjct: 153 DMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 209
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
           E ++ R +    DVWS G++++ ++  G  P+W  T + + +AI   + D+ R P P   
Sbjct: 210 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI---EQDY-RLPPPMDC 265
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
             A                 L +++ + W K+ NH P
Sbjct: 266 PSA-----------------LHQLMLDCWQKDRNHRP 285

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
           ++   G+ +G G+FG  HQ   +          I   K  T    D VR    +E   MR
Sbjct: 10  ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS---DSVREKFLQEALTMR 66
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
               HP+IV       + + ++++MELC  GEL   +  + +  + A+  +    L    
Sbjct: 67  QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 124
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
              E+   +HRD+   N L    S N  +K  DFGLS + +    +    G  P  +MAP
Sbjct: 125 AYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
           E +  R +    DVW  GV ++ IL+ GV PF     +G+ +  + G+I+  ER P P
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 234

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
           ++   G+ +G G+FG  HQ   +          I   K  T    D VR    +E   MR
Sbjct: 12  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS---DSVREKFLQEALTMR 68
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
               HP+IV       + + ++++MELC  GEL   +  + +  + A+  +    L    
Sbjct: 69  QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 126
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
              E+   +HRD+   N L    S N  +K  DFGLS + +    +    G  P  +MAP
Sbjct: 127 AYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 183
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
           E +  R +    DVW  GV ++ IL+ GV PF     +G+ +  + G+I+  ER P P
Sbjct: 184 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 236

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
           ++   G+ +G G+FG  HQ   +          I   K  T    D VR    +E   MR
Sbjct: 10  ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS---DSVREKFLQEALTMR 66
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
               HP+IV       + + ++++MELC  GEL   +  + +  + A+  +    L    
Sbjct: 67  QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 124
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
              E+   +HRD+   N L    S N  +K  DFGLS + +    +    G  P  +MAP
Sbjct: 125 AYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
           E +  R +    DVW  GV ++ IL+ GV PF     +G+ +  + G+I+  ER P P
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 234

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 16/207 (7%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + ++ +    ++++  +E  +M+ + KHPN
Sbjct: 21  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPN 75
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           +V        +   Y++ E    G L D  R  N+          +   I   ++   + 
Sbjct: 76  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRR 258
             +HRDL   N L     EN  +K  DFGLS     G+      G+ +   + APE L  
Sbjct: 136 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAY 191
Query: 259 N-YGPEIDVWSAGVIIY-ILLCGVPPF 283
           N +  + DVW+ GV+++ I   G+ P+
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPY 218

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
           ++   G+ +G G+FG  HQ   +          I   K  T    D VR    +E   MR
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS---DSVREKFLQEALTMR 63
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
               HP+IV       + + ++++MELC  GEL   +  + +  + A+  +    L    
Sbjct: 64  QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 121
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
              E+   +HRD+   N L    S N  +K  DFGLS + +    +    G  P  +MAP
Sbjct: 122 AYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 178
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
           E +  R +    DVW  GV ++ IL+ GV PF     +G+ +  + G+I+  ER P P
Sbjct: 179 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 231

>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain Length = 142

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
           DQ+++ K+ F + D+++ G +T E L+  L   G +V       +   AD  GNG +   
Sbjct: 3   DQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFP 62
Query: 444 EFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
           EF++ M   +K+  ++DIL QAFR FD   +G+I
Sbjct: 63  EFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYI 96

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 119/279 (42%), Gaps = 38/279 (13%)
Query: 87  KELGRGEFGITHQC-FEIE---TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           ++LG G FG    C ++ E   TGE  A K +  E     I   D+++E+EI+R+L  H 
Sbjct: 27  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA--DLKKEIEILRNL-YHE 83
Query: 143 NIVTYKE-AYED-KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKVCH 199
           NIV YK    ED  + I L+ME    G L + +  NK     +        I + +    
Sbjct: 84  NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 143
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI---VGSP-YYMAPEV 255
               +HRDL   N L        Q+K  DFGL+   +  ++   +     SP ++ APE 
Sbjct: 144 SRQYVHRDLAARNVLV---ESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 200
Query: 256 LRRN-YGPEIDVWSAGVIIYILLCGV---------------PPFWAETEEGIAHAIIRGK 299
           L ++ +    DVWS GV ++ LL                  P     T   + + +  GK
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK 260
Query: 300 IDFERDPW-PKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
               R P  P    E  +L++   +  P NR + + ++E
Sbjct: 261 ----RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 119/279 (42%), Gaps = 38/279 (13%)
Query: 87  KELGRGEFGITHQC-FEIE---TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           ++LG G FG    C ++ E   TGE  A K +  E     I   D+++E+EI+R+L  H 
Sbjct: 15  RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA--DLKKEIEILRNL-YHE 71
Query: 143 NIVTYKE-AYED-KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKVCH 199
           NIV YK    ED  + I L+ME    G L + +  NK     +        I + +    
Sbjct: 72  NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG 131
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI---VGSP-YYMAPEV 255
               +HRDL   N L        Q+K  DFGL+   +  ++   +     SP ++ APE 
Sbjct: 132 SRQYVHRDLAARNVLV---ESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 188
Query: 256 LRRN-YGPEIDVWSAGVIIYILLCGV---------------PPFWAETEEGIAHAIIRGK 299
           L ++ +    DVWS GV ++ LL                  P     T   + + +  GK
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGK 248
Query: 300 IDFERDPW-PKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
               R P  P    E  +L++   +  P NR + + ++E
Sbjct: 249 ----RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 283

>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal Muscle Troponin C Length = 162

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L ++ +A+ K  F M D D  GD++ +EL   + M+GQ  +  ++  ++E  D DG+G +
Sbjct: 14  LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 441 SCDEFVTMSV-HLKRIG---NDDILSQAFRFFDKNQSGFI 476
             +EF+ M V  +K      +++ L+  FR FDKN  GFI
Sbjct: 74  DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFI 113

>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of Troponin I Length = 159

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L ++ +A+ K  F M D D  GD++ +EL   + M+GQ  +  ++  ++E  D DG+G +
Sbjct: 11  LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 441 SCDEFVTMSV-HLKRIG---NDDILSQAFRFFDKNQSGFI 476
             +EF+ M V  +K      +++ L++ FR FD+N  G+I
Sbjct: 71  DFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYI 110

>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight Muscle Length = 159

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L ++ +A+ K  F M D D  GD++ +EL   + M+GQ  +  ++  ++E  D DG+G +
Sbjct: 11  LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 70
Query: 441 SCDEFVTMSV-HLKRIG---NDDILSQAFRFFDKNQSGFI 476
             +EF+ M V  +K      +++ L+  FR FDKN  GFI
Sbjct: 71  DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFI 110

>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+- Activated State Length = 162

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L ++ +A+ K  F M D D  GD++ +EL   + M+GQ  +  ++  ++E  D DG+G +
Sbjct: 14  LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 441 SCDEFVTMSV-HLKRIG---NDDILSQAFRFFDKNQSGFI 476
             +EF+ M V  +K      +++ L+  FR FDKN  GFI
Sbjct: 74  DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFI 113

>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In The Two-Calcium State At 2-Angstroms Resolution Length = 162

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L ++ +A+ K  F M D D  GD++ +EL   + M+GQ  +  ++  ++E  D DG+G +
Sbjct: 14  LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 441 SCDEFVTMSV-HLKRIG---NDDILSQAFRFFDKNQSGFI 476
             +EF+ M V  +K      +++ L+  FR FDKN  GFI
Sbjct: 74  DFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFI 113

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 58.5 bits (140), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 106/238 (44%), Gaps = 23/238 (9%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
           ++   G+ +G G+FG  HQ   +          I   K  T    D VR    +E   MR
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS---DSVREKFLQEALTMR 446
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
               HP+IV       + + ++++MELC  GEL   +  +    + A+  +    L    
Sbjct: 447 QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 504
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
              E+   +HRD+   N L    S N  +K  DFGLS + +    +    G  P  +MAP
Sbjct: 505 AYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 561
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
           E +  R +    DVW  GV ++ IL+ GV PF     +G+ +  + G+I+  ER P P
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 614

>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Calmodulin Length = 148

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           A+ L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 1   AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
           G +   EF++ M+  +K   +++ L +AF+ FD++ +G I
Sbjct: 61  GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLI 100

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 99/254 (38%), Gaps = 52/254 (20%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     LG G FG   +C +   G++    KI +   K     +  R E+ +++ + +
Sbjct: 51  ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR---EAARLEINVLKKIKE 107
Query: 141 HPNIVTYKEAYEDKDAIYLVM----------ELCEGGEL-------FDRIVNKGHYTERA 183
                      +DK+  +L +           +C   EL       F +  N   Y    
Sbjct: 108 -----------KDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPH 156
Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS----------------ENSQLKAI 227
              +   +   ++  HEN + H DLKPEN LF +                  +N+ ++  
Sbjct: 157 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 216
Query: 228 DFGLSIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAE 286
           DFG + F    E    IV + +Y  PEV L   +    DVWS G I++    G   F  +
Sbjct: 217 DFGSATF--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF--Q 272
Query: 287 TEEGIAHAIIRGKI 300
           T E   H ++  KI
Sbjct: 273 THENREHLVMMEKI 286

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 99/254 (38%), Gaps = 52/254 (20%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     LG G FG   +C +   G++    KI +   K     +  R E+ +++ + +
Sbjct: 28  ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR---EAARLEINVLKKIKE 84
Query: 141 HPNIVTYKEAYEDKDAIYLVM----------ELCEGGEL-------FDRIVNKGHYTERA 183
                      +DK+  +L +           +C   EL       F +  N   Y    
Sbjct: 85  -----------KDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPH 133
Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS----------------ENSQLKAI 227
              +   +   ++  HEN + H DLKPEN LF +                  +N+ ++  
Sbjct: 134 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 193
Query: 228 DFGLSIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAE 286
           DFG + F    E    IV + +Y  PEV L   +    DVWS G I++    G   F  +
Sbjct: 194 DFGSATF--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF--Q 249
Query: 287 TEEGIAHAIIRGKI 300
           T E   H ++  KI
Sbjct: 250 THENREHLVMMEKI 263

>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal Troponin C Length = 159

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L ++ +A+ K  F M D D  GD++ +EL   + M+GQ  +  ++  ++E  D DG+G +
Sbjct: 11  LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 441 SCDEFVTMSV-HLKRIG---NDDILSQAFRFFDKNQSGFI 476
             +EF+ M V  +K      +++ L++ FR FD+N  G+I
Sbjct: 71  DFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYI 110

>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey Skeletal Muscle At 2.0 Angstroms Resolution Length = 162

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L ++ +A+ K  F M D D  GD++ +EL   + M+GQ  +  ++  ++E  D DG+G +
Sbjct: 14  LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 441 SCDEFVTMSV-HLKRIG---NDDILSQAFRFFDKNQSGFI 476
             +EF+ M V  +K      +++ L   FR FDKN  GFI
Sbjct: 74  DFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFI 113

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 94/229 (41%), Gaps = 45/229 (19%)
Query: 85  FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRHLPKH 141
           FGK LG G FG   +      G+  A  K+A + LK+    D+   +  E++IM HL +H
Sbjct: 42  FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG------------------HYTERA 183
            NIV    A      + ++ E C  G+L + +  K                   H++ + 
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL-------SIFFK 236
           A  +        K C     +HRD+   N L  +G      K  DFGL       S +  
Sbjct: 162 AQGMA---FLASKNC-----IHRDVAARNVLLTNGHVA---KIGDFGLARDIMNDSNYIV 210
Query: 237 PGEQFCEIVGSPYYMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            G     +     +MAPE +    Y  + DVWS G++++ I   G+ P+
Sbjct: 211 KGNARLPV----KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 255

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 99/254 (38%), Gaps = 52/254 (20%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y     LG G FG   +C +   G++    KI +   K     +  R E+ +++ + +
Sbjct: 19  ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR---EAARLEINVLKKIKE 75
Query: 141 HPNIVTYKEAYEDKDAIYLVM----------ELCEGGEL-------FDRIVNKGHYTERA 183
                      +DK+  +L +           +C   EL       F +  N   Y    
Sbjct: 76  -----------KDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPH 124
Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS----------------ENSQLKAI 227
              +   +   ++  HEN + H DLKPEN LF +                  +N+ ++  
Sbjct: 125 VRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA 184
Query: 228 DFGLSIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAE 286
           DFG + F    E    IV + +Y  PEV L   +    DVWS G I++    G   F  +
Sbjct: 185 DFGSATF--DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF--Q 240
Query: 287 TEEGIAHAIIRGKI 300
           T E   H ++  KI
Sbjct: 241 THENREHLVMMEKI 254

>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase Length = 197

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 66/128 (51%)
Query: 349 NVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEE 408
           +V L   +   +K F   N+ KK  L ++A +L   ++  ++ +F  +D D +G L+ +E
Sbjct: 19  HVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQE 78
Query: 409 LKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFF 468
           + DGL  IG +   PD+  ++   D + +G +   +F+  ++  +     ++    F+FF
Sbjct: 79  ILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFF 138
Query: 469 DKNQSGFI 476
           D + +G I
Sbjct: 139 DIDGNGKI 146

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 30/229 (13%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           D+   GK LGRG FG   +       +T  C+ +A + LK   T  +   +  E++I+ H
Sbjct: 29  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 138 LPKHPNIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGH----YTERAAAAVGKTIL 192
           +  H N+V    A       + +++E C+ G L   + +K +    Y E A   + K  L
Sbjct: 89  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKE-APEDLYKDFL 147
Query: 193 RIVK-VCHENGV------------MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKP 237
            +   +C+   V            +HRDL   N L    SE + +K  DFGL+  I+  P
Sbjct: 148 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDP 204
Query: 238 GEQFCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
                     P  +MAPE +  R Y  + DVWS GV+++ I   G  P+
Sbjct: 205 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 253

>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin Length = 148

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/100 (31%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL      +G   ++ +++  +   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGN 60
Query: 438 GLLSCDEFVTMSVHL-KRIGNDDILSQAFRFFDKNQSGFI 476
           G ++  EF+T      K   +++ + +AFR FDK+ +G+I
Sbjct: 61  GTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYI 100

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 94/229 (41%), Gaps = 45/229 (19%)
Query: 85  FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRHLPKH 141
           FGK LG G FG   +      G+  A  K+A + LK+    D+   +  E++IM HL +H
Sbjct: 50  FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG------------------HYTERA 183
            NIV    A      + ++ E C  G+L + +  K                   H++ + 
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL-------SIFFK 236
           A  +        K C     +HRD+   N L  +G      K  DFGL       S +  
Sbjct: 170 AQGMA---FLASKNC-----IHRDVAARNVLLTNGHVA---KIGDFGLARDIMNDSNYIV 218
Query: 237 PGEQFCEIVGSPYYMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
            G     +     +MAPE +    Y  + DVWS G++++ I   G+ P+
Sbjct: 219 KGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 263

>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8 Angstroms Resolution Length = 148

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           A  L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 1   AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
           G +   EF++ M+  +K   +++ L +AF+ FD++ +G I
Sbjct: 61  GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLI 100

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 92/227 (40%), Gaps = 35/227 (15%)
Query: 85  FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRHLPKH 141
           FGK LG G FG   +      G+  A  K+A + LK+    D+   +  E++IM HL +H
Sbjct: 50  FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-----------VNKGHYTE-----RAAA 185
            NIV    A      + ++ E C  G+L + +            N  H  E     R   
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 186 AVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL-------SIFFKPG 238
                + + +        +HRD+   N L  +G      K  DFGL       S +   G
Sbjct: 170 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG---HVAKIGDFGLARDIMNDSNYIVKG 226
Query: 239 EQFCEIVGSPYYMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
                +     +MAPE +    Y  + DVWS G++++ I   G+ P+
Sbjct: 227 NARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 269

>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant) Length = 449

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
           D L ++Q+A+ K+ F + D D +G +T ++L   +  +GQ  ++ +++ ++     DGNG
Sbjct: 303 DQLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNG 362
Query: 439 LLSCDEFVTMSVH-LKRIGNDDILSQAFRFFDKNQSGFI 476
            +   +F+TM    +K   +++ + +AFR F K+ +G+I
Sbjct: 363 TIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYI 401

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 113/277 (40%), Gaps = 49/277 (17%)
Query: 89  LGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLPKH 141
           +G GEFG      E+ +G      K    +A + LK   TE    D   E  IM     H
Sbjct: 15  IGAGEFG------EVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-DH 67
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGEL--FDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           PN++  +        + ++ E  E G L  F R  N G +T      + + I   +K   
Sbjct: 68  PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAAGMKYLA 126
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK---PGEQFCEIVGSPY---YMAP 253
           +   +HR L   N L    + N   K  DFGLS F +       +   +G      + AP
Sbjct: 127 DMNYVHRALAARNILV---NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 183
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
           E ++ R +    DVWS G++++ ++  G  P+W  T + + +AI   + D+ R P P   
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI---EQDY-RLPPPMDC 239
Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
             A                 L +++ + W K+ NH P
Sbjct: 240 PSA-----------------LHQLMLDCWQKDRNHRP 259

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 32/213 (15%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE-----IDIDDVRREVEIMRHLPKHP 142
           E+G G  G   +    +TG   A K++ +   K E     +D+D V +  +        P
Sbjct: 32  EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDC-------P 84
Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCH- 199
            IV     +     +++ MEL   G   +++  +  G   ER    +GK  + IVK  + 
Sbjct: 85  YIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERI---LGKMTVAIVKALYY 139
Query: 200 ---ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
              ++GV+HRD+KP N L     E  Q+K  DFG+S      +      G   YMAPE +
Sbjct: 140 LKEKHGVIHRDVKPSNILL---DERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERI 196
Query: 257 ------RRNYGPEIDVWSAGVIIYILLCGVPPF 283
                 + +Y    DVWS G+ +  L  G  P+
Sbjct: 197 DPPDPTKPDYDIRADVWSLGISLVELATGQFPY 229

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 28/228 (12%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           D+   GK LGRG FG   +       +T  C+ +A + LK   T  +   +  E++I+ H
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 138 LPKHPNIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHY---TERAAAAVGKTILR 193
           +  H N+V    A       + +++E C+ G L   + +K +     + A   + K  L 
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 194 IVK-VCHENGV------------MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPG 238
           +   +C+   V            +HRDL   N L    SE + +K  DFGL+  I+  P 
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPD 203
Query: 239 EQFCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
                    P  +MAPE +  R Y  + DVWS GV+++ I   G  P+
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 105/238 (44%), Gaps = 23/238 (9%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
           ++   G+ +G G+FG  HQ   +          I   K  T    D VR    +E   MR
Sbjct: 10  ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS---DSVREKFLQEALTMR 66
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
               HP+IV       + + ++++MELC  GEL   +  +    + A+  +    L    
Sbjct: 67  QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 124
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
              E+   +HRD+   N L    S N  +K  DFGLS + +         G  P  +MAP
Sbjct: 125 AYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAP 181
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
           E +  R +    DVW  GV ++ IL+ GV PF     +G+ +  + G+I+  ER P P
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 234

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 98/230 (42%), Gaps = 26/230 (11%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMR 136
           T  + +G GEFG      E+ +G      K    +A + LK   TE    D   E  IM 
Sbjct: 25  TIERVIGAGEFG------EVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMG 78
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIV--NKGHYTERAAAAVGKTILRI 194
               HPNI+  +        + +V E  E G L D  +  N G +T      + + I   
Sbjct: 79  QF-DHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISAG 136
Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-Y 250
           +K   + G +HRDL   N L    + N   K  DFGLS   +  P   +    G  P  +
Sbjct: 137 MKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRW 193
Query: 251 MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
            APE +  R +    DVWS G++++ ++  G  P+W  T + +  A+  G
Sbjct: 194 TAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEG 243

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 28/228 (12%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           D+   GK LGRG FG   +       +T  C+ +A + LK   T  +   +  E++I+ H
Sbjct: 64  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 138 LPKHPNIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHY---TERAAAAVGKTILR 193
           +  H N+V    A       + +++E C+ G L   + +K +     + A   + K  L 
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 183
Query: 194 IVK-VCHENGV------------MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPG 238
           +   +C+   V            +HRDL   N L    SE + +K  DFGL+  I+  P 
Sbjct: 184 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPD 240
Query: 239 EQFCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
                    P  +MAPE +  R Y  + DVWS GV+++ I   G  P+
Sbjct: 241 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 288

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 28/228 (12%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           D+   GK LGRG FG   +       +T  C+ +A + LK   T  +   +  E++I+ H
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 138 LPKHPNIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHY---TERAAAAVGKTILR 193
           +  H N+V    A       + +++E C+ G L   + +K +     + A   + K  L 
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 194 IVK-VCHENGV------------MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPG 238
           +   +C+   V            +HRDL   N L    SE + +K  DFGL+  I+  P 
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPD 203
Query: 239 EQFCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
                    P  +MAPE +  R Y  + DVWS GV+++ I   G  P+
Sbjct: 204 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 105/238 (44%), Gaps = 23/238 (9%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
           ++   G+ +G G+FG  HQ   +          I   K  T    D VR    +E   MR
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS---DSVREKFLQEALTMR 446
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
               HP+IV       + + ++++MELC  GEL   +  +    + A+  +    L    
Sbjct: 447 QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 504
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
              E+   +HRD+   N L    S    +K  DFGLS + +    +    G  P  +MAP
Sbjct: 505 AYLESKRFVHRDIAARNVLV---SATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 561
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
           E +  R +    DVW  GV ++ IL+ GV PF     +G+ +  + G+I+  ER P P
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 614

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 29/198 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           + +G+GEFG      ++  G+ Y   K+A + +K +        E  +M  L +H N+V 
Sbjct: 27  QTIGKGEFG------DVMLGD-YRGNKVAVKCIKNDATAQAFLAEASVMTQL-RHSNLVQ 78
Query: 147 YKEA-YEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI-VKVCHE---- 200
                 E+K  +Y+V E    G L D + ++G      +   G  +L+  + VC      
Sbjct: 79  LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-----SVLGGDCLLKFSLDVCEAMEYL 133
Query: 201 --NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY-YMAPEVLR 257
             N  +HRDL   N L    SE++  K  DFGL+   K      +    P  + APE LR
Sbjct: 134 EGNNFVHRDLAARNVLV---SEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALR 187
Query: 258 -RNYGPEIDVWSAGVIIY 274
            + +  + DVWS G++++
Sbjct: 188 EKKFSTKSDVWSFGILLW 205

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 94/234 (40%), Gaps = 42/234 (17%)
Query: 85  FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRHLPKH 141
           FGK LG G FG   +      G+  A  K+A + LK+    D+   +  E++IM HL +H
Sbjct: 35  FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 94
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGK----------TI 191
            NIV    A      + ++ E C  G+L + +  K       + A G+            
Sbjct: 95  ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 192 LRIVKVCH-------------ENGVMHRDLKPENFLFADGSENSQLKAIDFGL------- 231
           L +  + H                 +HRD+   N L  +G      K  DFGL       
Sbjct: 155 LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIMND 211
Query: 232 SIFFKPGEQFCEIVGSPYYMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
           S +   G     +     +MAPE +    Y  + DVWS G++++ I   G+ P+
Sbjct: 212 SNYIVKGNARLPV----KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 261

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 105/238 (44%), Gaps = 23/238 (9%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR----REVEIMR 136
           ++   G+ +G G+FG  HQ   +          I   K  T    D VR    +E   MR
Sbjct: 10  ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTS---DSVREKFLQEALTMR 66
Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
               HP+IV       + + ++++MELC  GEL   +  +    + A+  +    L    
Sbjct: 67  QF-DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 124
Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY-YMAP 253
              E+   +HRD+   N L    S    +K  DFGLS + +    +    G  P  +MAP
Sbjct: 125 AYLESKRFVHRDIAARNVLV---SATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKID-FERDPWP 308
           E +  R +    DVW  GV ++ IL+ GV PF     +G+ +  + G+I+  ER P P
Sbjct: 182 ESINFRRFTSASDVWMFGVCMWEILMHGVKPF-----QGVKNNDVIGRIENGERLPMP 234

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 100/228 (43%), Gaps = 28/228 (12%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           D+   GK LGRG FG   +       +T  C+ +A + LK   T  +   +  E++I+ H
Sbjct: 18  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVM-ELCEGGELFDRIVNKGHY---TERAAAAVGKTILR 193
           +  H N+V    A        +V+ E C+ G L   + +K +     + A   + K  L 
Sbjct: 78  IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 194 IVK-VCHENGV------------MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPG 238
           +   +C+   V            +HRDL   N L    SE + +K  DFGL+  I+  P 
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPD 194
Query: 239 EQFCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
                    P  +MAPE +  R Y  + DVWS GV+++ I   G  P+
Sbjct: 195 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 27/227 (11%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           D+   GK LGRG FG   +       +T  C+ +A + LK   T  +   +  E++I+ H
Sbjct: 28  DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 138 LPKHPNIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTILRI 194
           +  H N+V    A       + +++E C+ G L   + +K +     +    + K  L +
Sbjct: 88  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTL 147
Query: 195 VK-VCHENGV------------MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPGE 239
              +C+   V            +HRDL   N L    SE + +K  DFGL+  I   P  
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIXKDPDX 204
Query: 240 QFCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
                   P  +MAPE +  R Y  + DVWS GV+++ I   G  P+
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 29/198 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           + +G+GEFG      ++  G+ Y   K+A + +K +        E  +M  L +H N+V 
Sbjct: 12  QTIGKGEFG------DVMLGD-YRGNKVAVKCIKNDATAQAFLAEASVMTQL-RHSNLVQ 63
Query: 147 YKEA-YEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI-VKVCHE---- 200
                 E+K  +Y+V E    G L D + ++G      +   G  +L+  + VC      
Sbjct: 64  LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-----SVLGGDCLLKFSLDVCEAMEYL 118
Query: 201 --NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY-YMAPEVLR 257
             N  +HRDL   N L    SE++  K  DFGL+   K      +    P  + APE LR
Sbjct: 119 EGNNFVHRDLAARNVLV---SEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALR 172
Query: 258 -RNYGPEIDVWSAGVIIY 274
            + +  + DVWS G++++
Sbjct: 173 EKKFSTKSDVWSFGILLW 190

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 100/228 (43%), Gaps = 28/228 (12%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           D+   GK LGRG FG   +       +T  C+ +A + LK   T  +   +  E++I+ H
Sbjct: 18  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVM-ELCEGGELFDRIVNKGHY---TERAAAAVGKTILR 193
           +  H N+V    A        +V+ E C+ G L   + +K +     + A   + K  L 
Sbjct: 78  IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 194 IVK-VCHENGV------------MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPG 238
           +   +C+   V            +HRDL   N L    SE + +K  DFGL+  I+  P 
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPD 194
Query: 239 EQFCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
                    P  +MAPE +  R Y  + DVWS GV+++ I   G  P+
Sbjct: 195 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 117/276 (42%), Gaps = 38/276 (13%)
Query: 87  KELGRGEFG--ITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNI 144
           +ELG G FG     +C+ +   +      +   K  T     D +RE E++ +L +H +I
Sbjct: 21  RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL-QHEHI 79
Query: 145 VTYKEAYEDKDAIYLVMELCEGGEL--FDR--------IVN------KGHYTERAAAAVG 188
           V +     D D + +V E  + G+L  F R        +V+      KG         + 
Sbjct: 80  VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI------FFKPGEQFC 242
             I   +        +HRDL   N L      N  +K  DFG+S       +++ G    
Sbjct: 140 SQIASGMVYLASQHFVHRDLATRNCLVG---ANLLVKIGDFGMSRDVYSTDYYRVGGHTM 196
Query: 243 EIVGSPYYMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKI 300
             +    +M PE ++ R +  E DVWS GVI++ I   G  P++  +   +   I +G++
Sbjct: 197 LPI---RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRV 253
Query: 301 DFERDPWPKVS-KEAKELVKNMLDPNPYNRLTLEEV 335
             ER   P+V  KE  +++       P  RL ++E+
Sbjct: 254 -LER---PRVCPKEVYDVMLGCWQREPQQRLNIKEI 285

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
           K +G GEFG      E+ +G      K    +A + LK   TE    D   E  IM    
Sbjct: 51  KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 103
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
            HPNI+  +        + +V E  E G L D  + K    +T      + + I   +K 
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
             + G +HRDL   N L    + N   K  DFGLS   +  P   +    G  P  + +P
Sbjct: 163 LSDMGAVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           E +  R +    DVWS G++++ ++  G  P+W  + + +  A+  G
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 28/228 (12%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           D+   GK LGRG FG   +       +T  C+ +A + LK   T  +   +  E++I+ H
Sbjct: 18  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 138 LPKHPNIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHY---TERAAAAVGKTILR 193
           +  H N+V    A       + +++E C+ G L   + +K +     + A   + K  L 
Sbjct: 78  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 194 IVK-VCHENGV------------MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPG 238
           +   +C+   V            +HRDL   N L    SE + +K  DFGL+  I   P 
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIXKDPD 194
Query: 239 EQFCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
                    P  +MAPE +  R Y  + DVWS GV+++ I   G  P+
Sbjct: 195 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 28/228 (12%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           D+   GK LGRG FG   +       +T  C+ +A + LK   T  +   +  E++I+ H
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 138 LPKHPNIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNKGHY---TERAAAAVGKTILR 193
           +  H N+V    A       + +++E C+ G L   + +K +     + A   + K  L 
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 194 IVK-VCHENGV------------MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPG 238
           +   +C+   V            +HRDL   N L    SE + +K  DFGL+  I   P 
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIXKDPD 203
Query: 239 EQFCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
                    P  +MAPE +  R Y  + DVWS GV+++ I   G  P+
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
           K +G GEFG      E+ +G      K    +A + LK   TE    D   E  IM    
Sbjct: 51  KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 103
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
            HPNI+  +        + +V E  E G L D  + K    +T      + + I   +K 
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
             + G +HRDL   N L    + N   K  DFGLS   +  P   +    G  P  + +P
Sbjct: 163 LSDMGFVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           E +  R +    DVWS G++++ ++  G  P+W  + + +  A+  G
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           TF KELG G+FG+    +    G+     K+ KE   +E   D+   E ++M +L  H  
Sbjct: 12  TFLKELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNL-SHEK 65
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHENG 202
           +V        +  I+++ E    G L + +    H +  +    + K +   ++      
Sbjct: 66  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRN 259
            +HRDL   N L  D      +K  DFGLS +    E +   VGS +   +  PEVL  +
Sbjct: 126 FLHRDLAARNCLVND---QGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS 181
Query: 260 -YGPEIDVWSAGVIIY-ILLCGVPPFW----AETEEGIAHAI 295
            +  + D+W+ GV+++ I   G  P+     +ET E IA  +
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 223

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
           K +G GEFG      E+ +G      K    +A + LK   TE    D   E  IM    
Sbjct: 22  KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 74
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
            HPNI+  +        + +V E  E G L D  + K    +T      + + I   +K 
Sbjct: 75  DHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
             + G +HRDL   N L    + N   K  DFGLS   +  P   +    G  P  + +P
Sbjct: 134 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           E +  R +    DVWS G++++ ++  G  P+W  + + +  A+  G
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
           K +G GEFG      E+ +G      K    +A + LK   TE    D   E  IM    
Sbjct: 22  KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 74
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
            HPNI+  +        + +V E  E G L D  + K    +T      + + I   +K 
Sbjct: 75  DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 133
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
             + G +HRDL   N L    + N   K  DFGLS   +  P   +    G  P  + +P
Sbjct: 134 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           E +  R +    DVWS G++++ ++  G  P+W  + + +  A+  G
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           TF KELG G+FG+    +    G+     K+ KE   +E   D+   E ++M +L  H  
Sbjct: 27  TFLKELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNL-SHEK 80
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHENG 202
           +V        +  I+++ E    G L + +    H +  +    + K +   ++      
Sbjct: 81  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRN 259
            +HRDL   N L  D      +K  DFGLS +    E +   VGS +   +  PEVL  +
Sbjct: 141 FLHRDLAARNCLVND---QGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS 196
Query: 260 -YGPEIDVWSAGVIIY-ILLCGVPPFW----AETEEGIAHAI 295
            +  + D+W+ GV+++ I   G  P+     +ET E IA  +
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 238

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           TF KELG G+FG+    +    G+     K+ KE   +E   D+   E ++M +L  H  
Sbjct: 11  TFLKELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNL-SHEK 64
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHENG 202
           +V        +  I+++ E    G L + +    H +  +    + K +   ++      
Sbjct: 65  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 124
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRN 259
            +HRDL   N L  D      +K  DFGLS +    E +   VGS +   +  PEVL  +
Sbjct: 125 FLHRDLAARNCLVND---QGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS 180
Query: 260 -YGPEIDVWSAGVIIY-ILLCGVPPFW----AETEEGIAHAI 295
            +  + D+W+ GV+++ I   G  P+     +ET E IA  +
Sbjct: 181 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 222

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
           K +G GEFG      E+ +G      K    +A + LK   TE    D   E  IM    
Sbjct: 39  KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 91
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
            HPNI+  +        + +V E  E G L D  + K    +T      + + I   +K 
Sbjct: 92  DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 150
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
             + G +HRDL   N L    + N   K  DFGLS   +  P   +    G  P  + +P
Sbjct: 151 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 207
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           E +  R +    DVWS G++++ ++  G  P+W  + + +  A+  G
Sbjct: 208 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 254

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 29/198 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           + +G+GEFG      ++  G+ Y   K+A + +K +        E  +M  L +H N+V 
Sbjct: 199 QTIGKGEFG------DVMLGD-YRGNKVAVKCIKNDATAQAFLAEASVMTQL-RHSNLVQ 250
Query: 147 YKEA-YEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI-VKVCHE---- 200
                 E+K  +Y+V E    G L D + ++G      +   G  +L+  + VC      
Sbjct: 251 LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-----SVLGGDCLLKFSLDVCEAMEYL 305
Query: 201 --NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY-YMAPEVLR 257
             N  +HRDL   N L    SE++  K  DFGL+   K      +    P  + APE LR
Sbjct: 306 EGNNFVHRDLAARNVLV---SEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALR 359
Query: 258 -RNYGPEIDVWSAGVIIY 274
            + +  + DVWS G++++
Sbjct: 360 EKKFSTKSDVWSFGILLW 377

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           TF KELG G+FG+    +    G+     K+ KE   +E   D+   E ++M +L  H  
Sbjct: 7   TFLKELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNL-SHEK 60
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHENG 202
           +V        +  I+++ E    G L + +    H +  +    + K +   ++      
Sbjct: 61  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 120
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRN 259
            +HRDL   N L  D      +K  DFGLS +    E +   VGS +   +  PEVL  +
Sbjct: 121 FLHRDLAARNCLVND---QGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS 176
Query: 260 -YGPEIDVWSAGVIIY-ILLCGVPPFW----AETEEGIAHAI 295
            +  + D+W+ GV+++ I   G  P+     +ET E IA  +
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 218

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
           K +G GEFG      E+ +G      K    +A + LK   TE    D   E  IM    
Sbjct: 51  KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 103
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
            HPNI+  +        + +V E  E G L D  + K    +T      + + I   +K 
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
             + G +HRDL   N L    + N   K  DFGLS   +  P   +    G  P  + +P
Sbjct: 163 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           E +  R +    DVWS G++++ ++  G  P+W  + + +  A+  G
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
           K +G GEFG      E+ +G      K    +A + LK   TE    D   E  IM    
Sbjct: 51  KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 103
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
            HPNI+  +        + +V E  E G L D  + K    +T      + + I   +K 
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
             + G +HRDL   N L    + N   K  DFGLS   +  P   +    G  P  + +P
Sbjct: 163 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           E +  R +    DVWS G++++ ++  G  P+W  + + +  A+  G
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
           K +G GEFG      E+ +G      K    +A + LK   TE    D   E  IM    
Sbjct: 51  KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 103
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
            HPNI+  +        + +V E  E G L D  + K    +T      + + I   +K 
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
             + G +HRDL   N L    + N   K  DFGLS   +  P   +    G  P  + +P
Sbjct: 163 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           E +  R +    DVWS G++++ ++  G  P+W  + + +  A+  G
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 99/228 (43%), Gaps = 28/228 (12%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           D+   GK LGRG FG   +       +T  C+ +A + LK   T  +   +  E++I+ H
Sbjct: 18  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVM-ELCEGGELFDRIVNKGHY---TERAAAAVGKTILR 193
           +  H N+V    A        +V+ E C+ G L   + +K +     + A   + K  L 
Sbjct: 78  IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 194 IVK-VCHENGV------------MHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPG 238
           +   +C+   V            +HRDL   N L    SE + +K  DFGL+  I   P 
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIXKDPD 194
Query: 239 EQFCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
                    P  +MAPE +  R Y  + DVWS GV+++ I   G  P+
Sbjct: 195 XVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           TF KELG G+FG+    +    G+     K+ KE   +E   D+   E ++M +L  H  
Sbjct: 18  TFLKELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNL-SHEK 71
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHENG 202
           +V        +  I+++ E    G L + +    H +  +    + K +   ++      
Sbjct: 72  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 131
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRN 259
            +HRDL   N L  D      +K  DFGLS +    E +   VGS +   +  PEVL  +
Sbjct: 132 FLHRDLAARNCLVND---QGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYS 187
Query: 260 -YGPEIDVWSAGVIIY-ILLCGVPPFW----AETEEGIAHAI 295
            +  + D+W+ GV+++ I   G  P+     +ET E IA  +
Sbjct: 188 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 229

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 29/198 (14%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           + +G+GEFG      ++  G+ Y   K+A + +K +        E  +M  L +H N+V 
Sbjct: 18  QTIGKGEFG------DVMLGD-YRGNKVAVKCIKNDATAQAFLAEASVMTQL-RHSNLVQ 69
Query: 147 YKEA-YEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI-VKVCHE---- 200
                 E+K  +Y+V E    G L D + ++G      +   G  +L+  + VC      
Sbjct: 70  LLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-----SVLGGDCLLKFSLDVCEAMEYL 124
Query: 201 --NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY-YMAPEVLR 257
             N  +HRDL   N L    SE++  K  DFGL+   K      +    P  + APE LR
Sbjct: 125 EGNNFVHRDLAARNVLV---SEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALR 178
Query: 258 R-NYGPEIDVWSAGVIIY 274
              +  + DVWS G++++
Sbjct: 179 EAAFSTKSDVWSFGILLW 196

>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-90 Length = 90

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTMSVH-LKRIGNDDILSQAFR 466
           G +   EF+TM    +K   +++ + +AFR
Sbjct: 61  GTIDFPEFLTMMARKMKDTDSEEEIREAFR 90

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
           K +G GEFG      E+ +G      K    +A + LK   TE    D   E  IM    
Sbjct: 51  KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 103
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
            HPNI+  +        + +V E  E G L D  + K    +T      + + I   +K 
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
             + G +HRDL   N L    + N   K  DFGLS   +  P   +    G  P  + +P
Sbjct: 163 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           E +  R +    DVWS G++++ ++  G  P+W  + + +  A+  G
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
           K +G GEFG      E+ +G      K    +A + LK   TE    D   E  IM    
Sbjct: 51  KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 103
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
            HPNI+  +        + +V E  E G L D  + K    +T      + + I   +K 
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
             + G +HRDL   N L    + N   K  DFGLS   +  P   +    G  P  + +P
Sbjct: 163 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           E +  R +    DVWS G++++ ++  G  P+W  + + +  A+  G
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
           K +G GEFG      E+ +G      K    +A + LK   TE    D   E  IM    
Sbjct: 49  KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 101
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
            HPNI+  +        + +V E  E G L D  + K    +T      + + I   +K 
Sbjct: 102 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 160
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
             + G +HRDL   N L    + N   K  DFGLS   +  P   +    G  P  + +P
Sbjct: 161 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 217
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           E +  R +    DVWS G++++ ++  G  P+W  + + +  A+  G
Sbjct: 218 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 264

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 99/222 (44%), Gaps = 20/222 (9%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           TF KELG G+FG+    +    G+     K+ KE   +E   D+   E ++M +L  H  
Sbjct: 27  TFLKELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNL-SHEK 80
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHENG 202
           +V        +  I+++ E    G L + +    H +  +    + K +   ++      
Sbjct: 81  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRN 259
            +HRDL   N L  D      +K  DFGLS +    E+    VGS +   +  PEVL  +
Sbjct: 141 FLHRDLAARNCLVND---QGVVKVSDFGLSRYVLDDEE-TSSVGSKFPVRWSPPEVLMYS 196
Query: 260 -YGPEIDVWSAGVIIY-ILLCGVPPFW----AETEEGIAHAI 295
            +  + D+W+ GV+++ I   G  P+     +ET E IA  +
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 238

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 26/225 (11%)
Query: 89  LGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLPKH 141
           +G GEFG      E+ +G      K    +A + LK   TE    D   E  IM     H
Sbjct: 51  IGAGEFG------EVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQF-DH 103
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCH 199
           PN+V  +        + +V+E  E G L D  + K  G +T      + + I   ++   
Sbjct: 104 PNVVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAGMRYLA 162
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAPEV 255
           + G +HRDL   N L    + N   K  DFGLS   +  P   +    G  P  + APE 
Sbjct: 163 DMGYVHRDLAARNILV---NSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEA 219
Query: 256 LR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           ++ R +    DVWS G++++ ++  G  P+W  + + +  AI  G
Sbjct: 220 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG 264

>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin Length = 169

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L ++Q  +I++ F + DTD +G +  +ELK  +  +G +    ++K ++   D DG+G +
Sbjct: 22  LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 441 SCDEFVTMSVHL--KRIGNDDILSQAFRFFDKNQSGFI 476
             +EF+TM      +R   ++IL +AFR FD + SG I
Sbjct: 82  DFEEFLTMMTAKMGERDSREEIL-KAFRLFDDDNSGTI 118

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 96/227 (42%), Gaps = 26/227 (11%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
           K +G GEFG      E+ +G      K    +A + LK   TE    D   E  IM    
Sbjct: 51  KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 103
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
            HPNI+  +        + +V E  E G L D  + K    +T      + + I   +K 
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
             + G +HRDL   N L    + N   K  DFGL+   +  P   +    G  P  + +P
Sbjct: 163 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           E +  R +    DVWS G++++ ++  G  P+W  + + +  A+  G
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266

>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 29/231 (12%)
Query: 76  EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           E  + +K+  G+++G G FG  +    I+T E  A K    E +KT+     +  E +I 
Sbjct: 2   EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---ENVKTKHP--QLLYESKIY 56
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILR 193
           R L     I   +    + D   LVM+L      +LF+    K   + +    +   ++ 
Sbjct: 57  RILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMIN 114
Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--------PGEQFCEIV 245
            V+  H    +HRD+KP+NFL   G   +Q+  IDFGL+  ++        P  +   + 
Sbjct: 115 RVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLT 174
Query: 246 GSPYY------MAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEG 290
           G+  Y      +  E  RR+     D+ S G ++   L G  P W   + G
Sbjct: 175 GTARYASVNTHLGIEQSRRD-----DLESLGYVLMYFLRGSLP-WQGLKAG 219

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 95/227 (41%), Gaps = 26/227 (11%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKK----IAKEKLK---TEIDIDDVRREVEIMRHLP 139
           K +G GEFG      E+ +G      K    +A + LK   TE    D   E  IM    
Sbjct: 51  KVVGAGEFG------EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF- 103
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKV 197
            HPNI+  +        + +V E  E G L D  + K    +T      + + I   +K 
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIASGMKY 162
Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--PGEQFCEIVGS-PY-YMAP 253
             + G +HRDL   N L    + N   K  DFGL    +  P   +    G  P  + +P
Sbjct: 163 LSDMGYVHRDLAARNILI---NSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 254 EVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           E +  R +    DVWS G++++ ++  G  P+W  + + +  A+  G
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 24/224 (10%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           D+   GK LGRG FG   +       +T   + +A + LK   T  +   +  E++I+ H
Sbjct: 27  DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 138 LPKHPNIVTYKEA-YEDKDAIYLVMELCEGGELFDRI------------VNKGHYTERAA 184
           +  H N+V    A  +    + +++E C+ G L   +            + K   T    
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFC 242
                 + + ++       +HRDL   N L    SE + +K  DFGL+  I+  P     
Sbjct: 147 IXYSFQVAKGMEFLASRKXIHRDLAARNILL---SEKNVVKIXDFGLARDIYKDPDYVRK 203
Query: 243 EIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
                P  +MAPE +  R Y  + DVWS GV+++ I   G  P+
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 24/224 (10%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           D+   GK LGRG FG   +       +T   + +A + LK   T  +   +  E++I+ H
Sbjct: 27  DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 138 LPKHPNIVTYKEAYEDKDA-IYLVMELCEGGELFDRI------------VNKGHYTERAA 184
           +  H N+V    A       + +++E C+ G L   +            + K   T    
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQFC 242
                 + + ++       +HRDL   N L    SE + +K  DFGL+  I+  P     
Sbjct: 147 ICYSFQVAKGMEFLASRKXIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVRK 203
Query: 243 EIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
                P  +MAPE +  R Y  + DVWS GV+++ I   G  P+
Sbjct: 204 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247

>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w Length = 191

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Query: 353 GGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDG 412
           G +V    K + ++ KF+K  + ++A       + ++K  F ++D D  G +T E+LK G
Sbjct: 18  GIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKG 77
Query: 413 LNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQ 472
           L   G K+   +  +L++  D DG+G +   EF+  ++  K++    ++  AFR FD + 
Sbjct: 78  LEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSK-KLIYCAFRVFDVDN 135
Query: 473 SGFI 476
            G I
Sbjct: 136 DGEI 139

>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           ++Y  G+++G G FG  +   +I  GE  A K    +    ++ I     E +I + +  
Sbjct: 9   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHI-----ESKIYKMMQG 63
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
              I T +    + D   +VMEL      +LF+    K  ++ +    +   ++  ++  
Sbjct: 64  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYI 121
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLS 232
           H    +HRD+KP+NFL   G + + +  IDFGL+
Sbjct: 122 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155

>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3, Cgd5_820 Length = 214

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 337 ENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNL-PQDQMAQIKQMFYM 395
           EN + +       +    N    +++F    K  +  L  +A  L  Q++  ++  +F  
Sbjct: 12  ENLYFQGKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRH 71
Query: 396 MDTDKNGDLTFEELKDGLNMI-GQKVS-------DPDVKMLMEAADVDGNGLLSCDEFVT 447
           +D + +G L  +EL DG + + G++V+       + +V  ++ AAD D NG +   EFVT
Sbjct: 72  IDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVT 131
Query: 448 MSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
           +++  K + + D L  AF+ FD++ +G I
Sbjct: 132 VAMDRKSLLSKDKLESAFQKFDQDGNGKI 160

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDID-DVRREVEIMRHLPKHPN-IV 145
           +LG+G FG    C     G+        K+   +  D   D +RE++I++ L  H + IV
Sbjct: 17  QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--HSDFIV 74
Query: 146 TYKEAY--EDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH---- 199
            Y+       + ++ LVME    G L D +        RA     + +L   ++C     
Sbjct: 75  KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-----HRARLDASRLLLYSSQICKGMEY 129
Query: 200 --ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
                 +HRDL   N L       + +K  DFGL+    P ++   +V  P     ++ A
Sbjct: 130 LGSRRCVHRDLAARNILV---ESEAHVKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYA 185
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILL 277
           PE L  N +  + DVWS GV++Y L 
Sbjct: 186 PESLSDNIFSRQSDVWSFGVVLYELF 211

>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 74/159 (46%), Gaps = 9/159 (5%)
Query: 76  EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           E  + ++Y  G+++G G FG  +   +I  GE  A K    +    ++ I     E +I 
Sbjct: 2   ELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHI-----ESKIY 56
Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILR 193
           + +     I T +    + D   +VMEL      +LF+    K  ++ +    +   ++ 
Sbjct: 57  KMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMIS 114
Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS 232
            ++  H    +HRD+KP+NFL   G + + +  IDFGL+
Sbjct: 115 RIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 153

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 20/222 (9%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           TF KELG G+FG+    +    G+     K+ KE   +E   D+   E ++M +L  H  
Sbjct: 12  TFLKELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNL-SHEK 65
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHENG 202
           +V        +  I+++ E    G L + +    H +  +    + K +   ++      
Sbjct: 66  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRN 259
            +HRDL   N L  D      +K  DFGLS +    E +    GS +   +  PEVL  +
Sbjct: 126 FLHRDLAARNCLVND---QGVVKVSDFGLSRYVLDDE-YTSSRGSKFPVRWSPPEVLMYS 181
Query: 260 -YGPEIDVWSAGVIIY-ILLCGVPPFW----AETEEGIAHAI 295
            +  + D+W+ GV+++ I   G  P+     +ET E IA  +
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL 223

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 92/235 (39%), Gaps = 32/235 (13%)
Query: 124 DIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA 183
           D  D   E+E++  L  HPNI+    A E +  +YL +E    G L D +          
Sbjct: 68  DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 127
Query: 184 AAAVGKT----------------ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI 227
           A A+  +                + R +    +   +HRDL   N L     EN   K  
Sbjct: 128 AFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYVAKIA 184
Query: 228 DFGLS----IFFKPGEQFCEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVP 281
           DFGLS    ++ K       +     +MA E L  + Y    DVWS GV+++ I+  G  
Sbjct: 185 DFGLSRGQEVYVKKTMGRLPVR----WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 240
Query: 282 PFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVL 336
           P+   T   +   + +G   +  +       E  +L++      PY R +  ++L
Sbjct: 241 PYCGMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 292

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDID-DVRREVEIMRHLPKHPN-IV 145
           +LG+G FG    C     G+        K+   +  D   D +RE++I++ L  H + IV
Sbjct: 30  QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--HSDFIV 87
Query: 146 TYKEAY--EDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH---- 199
            Y+       + ++ LVME    G L D +        RA     + +L   ++C     
Sbjct: 88  KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-----HRARLDASRLLLYSSQICKGMEY 142
Query: 200 --ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
                 +HRDL   N L       + +K  DFGL+    P ++   +V  P     ++ A
Sbjct: 143 LGSRRCVHRDLAARNILV---ESEAHVKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYA 198
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILL 277
           PE L  N +  + DVWS GV++Y L 
Sbjct: 199 PESLSDNIFSRQSDVWSFGVVLYELF 224

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 90/231 (38%), Gaps = 36/231 (15%)
Query: 85  FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRHLPKH 141
           FGK LG G FG           +T    ++A + LK + D  +   +  E+++M  L  H
Sbjct: 49  FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSH 108
Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH----------------------- 178
            NIV    A      IYL+ E C  G+L + + +K                         
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 179 YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG 238
            T          + + ++       +HRDL   N L   G     +K  DFGL+      
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG---KVVKICDFGLARDIMSD 225
Query: 239 EQFCEIVGSPY----YMAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVPPF 283
             +  + G+      +MAPE L    Y  + DVWS G++++ I   GV P+
Sbjct: 226 SNYV-VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDID-DVRREVEIMRHLPKHPN-IV 145
           +LG+G FG    C     G+        K+   +  D   D +RE++I++ L  H + IV
Sbjct: 18  QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--HSDFIV 75
Query: 146 TYKEAY--EDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH---- 199
            Y+       + ++ LVME    G L D +        RA     + +L   ++C     
Sbjct: 76  KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-----HRARLDASRLLLYSSQICKGMEY 130
Query: 200 --ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
                 +HRDL   N L       + +K  DFGL+    P ++   +V  P     ++ A
Sbjct: 131 LGSRRCVHRDLAARNILV---ESEAHVKIADFGLAKLL-PLDKDYYVVREPGQSPIFWYA 186
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILL 277
           PE L  N +  + DVWS GV++Y L 
Sbjct: 187 PESLSDNIFSRQSDVWSFGVVLYELF 212

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 92/235 (39%), Gaps = 32/235 (13%)
Query: 124 DIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA 183
           D  D   E+E++  L  HPNI+    A E +  +YL +E    G L D +          
Sbjct: 58  DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 117
Query: 184 AAAVGKT----------------ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI 227
           A A+  +                + R +    +   +HRDL   N L     EN   K  
Sbjct: 118 AFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---ENYVAKIA 174
Query: 228 DFGLS----IFFKPGEQFCEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVP 281
           DFGLS    ++ K       +     +MA E L  + Y    DVWS GV+++ I+  G  
Sbjct: 175 DFGLSRGQEVYVKKTMGRLPVR----WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 230
Query: 282 PFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVL 336
           P+   T   +   + +G   +  +       E  +L++      PY R +  ++L
Sbjct: 231 PYCGMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 282

>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567 Length = 296

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           +KY  G+++G G FG  +    I +GE  A K    +    ++ I     E +  + +  
Sbjct: 9   NKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHI-----ESKFYKMMQG 63
Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
              I + K    + D   +VMEL      +LF+    K  ++ +    +   ++  ++  
Sbjct: 64  GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYI 121
Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLS 232
           H    +HRD+KP+NFL   G + + +  IDFGL+
Sbjct: 122 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155

>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-75 Length = 75

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTM 448
           G +   EF+TM
Sbjct: 61  GTIDFPEFLTM 71

>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino- Terminal Domain (Ce2-Tr1c), 23 Structures Length = 76

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 2   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 438 GLLSCDEFVTM 448
           G +   EF+TM
Sbjct: 62  GTIDFPEFLTM 72

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 27/206 (13%)
Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDID-DVRREVEIMRHLPKHPN-IV 145
           +LG+G FG    C     G+        K+   +  D   D +RE++I++ L  H + IV
Sbjct: 14  QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL--HSDFIV 71
Query: 146 TYKEAY--EDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH---- 199
            Y+       +  + LVME    G L D +        RA     + +L   ++C     
Sbjct: 72  KYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR-----HRARLDASRLLLYSSQICKGMEY 126
Query: 200 --ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-----YYMA 252
                 +HRDL   N L       + +K  DFGL+    P ++   +V  P     ++ A
Sbjct: 127 LGSRRCVHRDLAARNILV---ESEAHVKIADFGLAKLL-PLDKDXXVVREPGQSPIFWYA 182
Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILL 277
           PE L  N +  + DVWS GV++Y L 
Sbjct: 183 PESLSDNIFSRQSDVWSFGVVLYELF 208

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 88  ELGRGEFGITHQ-CFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           ELG G FG   Q  + +   +     K+ K+  + + D +++ RE +IM  L  +P IV 
Sbjct: 17  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQL-DNPYIVR 74
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI---VKVCHENGV 203
                +  +A+ LVME+  GG L   +V  G   E   + V + + ++   +K   E   
Sbjct: 75  LIGVCQ-AEALMLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMGMKYLEEKNF 131
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS---PY-YMAPEVLR-R 258
           +HRDL   N L  +       K  DFGLS      + +     +   P  + APE +  R
Sbjct: 132 VHRDLAARNVLLVN---RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 188
Query: 259 NYGPEIDVWSAGVIIY 274
            +    DVWS GV ++
Sbjct: 189 KFSSRSDVWSYGVTMW 204

>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding Motif (Nscate) Peptide From The N-Terminal Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium Channel Alpha1c Subunit Length = 77

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTM 448
           G +   EF+TM
Sbjct: 61  GTIDFPEFLTM 71

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 95/226 (42%), Gaps = 26/226 (11%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           D+   GK LGRG FG   +       +T   + +A + LK   T  +   +  E++I+ H
Sbjct: 29  DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 138 LPKHPNIVTYKEAYEDKDA-IYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRI- 194
           +  H N+V    A       + +++E C+ G L   + +K   +       + K  L + 
Sbjct: 89  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLE 148
Query: 195 ------------VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS--IFFKPGEQ 240
                       ++       +HRDL   N L    SE + +K  DFGL+  I   P   
Sbjct: 149 HLIXYSFQVAKGMEFLASRKXIHRDLAARNILL---SEKNVVKICDFGLARDIXKDPDXV 205
Query: 241 FCEIVGSPY-YMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPF 283
                  P  +MAPE +  R Y  + DVWS GV+++ I   G  P+
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251

>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain Length = 76

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTM 448
           G +   EF+TM
Sbjct: 61  GTIDFPEFLTM 71

>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In The Presence Of Zn2+ Length = 79

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTM 448
           G +   EF+TM
Sbjct: 61  GTIDFPEFLTM 71

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 40/236 (16%)
Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
            ++   G+ +G+G FG   Q +        A + I  E+   E  +   +REV   R   
Sbjct: 32  FEQLEIGELIGKGRFG---QVYHGRWHGEVAIRLIDIER-DNEDQLKAFKREVMAYRQ-T 86
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI--------VNKGHYTERAAAAVGKTI 191
           +H N+V +  A      + ++  LC+G  L+  +        VNK          + + I
Sbjct: 87  RHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNK-------TRQIAQEI 139
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL---SIFFKPGEQFCEIV--- 245
           ++ +   H  G++H+DLK +N  +    +N ++   DFGL   S   + G +  ++    
Sbjct: 140 VKGMGYLHAKGILHKDLKSKNVFY----DNGKVVITDFGLFSISGVLQAGRREDKLRIQN 195
Query: 246 GSPYYMAPEVLRR----------NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGI 291
           G   ++APE++R+           +    DV++ G I Y L     PF  +  E I
Sbjct: 196 GWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI 251

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 35/267 (13%)
Query: 87  KELGRGEFG--ITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNI 144
           +ELG G FG     +C+ +   +      +   K  ++    D  RE E++ +L +H +I
Sbjct: 19  RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHI 77
Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG-------------HYTERAAAAVGKTI 191
           V +     + D + +V E  + G+L   +   G               T+     + + I
Sbjct: 78  VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI------FFKPGEQFCEIV 245
              +        +HRDL   N L     EN  +K  DFG+S       +++ G      +
Sbjct: 138 AAGMVYLASQHFVHRDLATRNCLVG---ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 194
Query: 246 GSPYYMAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFE 303
               +M PE ++ R +  E DVWS GV+++ I   G  P++  +   +   I +G++  +
Sbjct: 195 R---WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV-LQ 250
Query: 304 RDPWPKVS-KEAKELVKNMLDPNPYNR 329
           R   P+   +E  EL+       P+ R
Sbjct: 251 R---PRTCPQEVYELMLGCWQREPHMR 274

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 122/281 (43%), Gaps = 41/281 (14%)
Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T  KELG G+FG+         G+     K+ KE   +E   D+  +E + M  L  HP 
Sbjct: 11  TLLKELGSGQFGVVK--LGKWKGQYDVAVKMIKEGSMSE---DEFFQEAQTMMKL-SHPK 64
Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE--- 200
           +V +      +  IY+V E    G L + + + G   E +         +++++C++   
Sbjct: 65  LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPS---------QLLEMCYDVCE 115
Query: 201 -------NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---Y 250
                  +  +HRDL   N L      +  +K  DFG++ +    +Q+   VG+ +   +
Sbjct: 116 GMAFLESHQFIHRDLAARNCLV---DRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKW 171
Query: 251 MAPEVLRR-NYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP 308
            APEV     Y  + DVW+ G++++ +   G  P+   T   +   + +G     R   P
Sbjct: 172 SAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG----HRLYRP 227
Query: 309 KVSKEA-KELVKNMLDPNPYNRLTLEEVLEN--PWIKNDNH 346
            ++ +   +++ +     P  R T +++L +  P  + D H
Sbjct: 228 HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKDKH 268

>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound With Er Alpha Peptide Length = 80

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 438 GLLSCDEFVTM 448
           G +   EF+TM
Sbjct: 61  GTIDFPEFLTM 71

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 77/186 (41%), Gaps = 13/186 (6%)
Query: 121 TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGEL--FDRIVNKGH 178
           TE    D   E  IM     HPNI+  +          +V E  E G L  F R  + G 
Sbjct: 90  TERQRRDFLSEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQ 147
Query: 179 YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-- 236
           +T      + + +   ++   + G +HRDL   N L      N   K  DFGLS   +  
Sbjct: 148 FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDD 204
Query: 237 PGEQFCEIVGS-PY-YMAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIA 292
           P   +    G  P  + APE +  R +    DVWS GV+++ +L  G  P+W  T   + 
Sbjct: 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
Query: 293 HAIIRG 298
            ++  G
Sbjct: 265 SSVEEG 270

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 92/235 (39%), Gaps = 32/235 (13%)
Query: 124 DIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA 183
           D  D   E+E++  L  HPNI+    A E +  +YL +E    G L D +          
Sbjct: 65  DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 124
Query: 184 AAAVGKT----------------ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI 227
           A A+  +                + R +    +   +HR+L   N L     EN   K  
Sbjct: 125 AFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVG---ENYVAKIA 181
Query: 228 DFGLS----IFFKPGEQFCEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVP 281
           DFGLS    ++ K       +     +MA E L  + Y    DVWS GV+++ I+  G  
Sbjct: 182 DFGLSRGQEVYVKKTMGRLPVR----WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 237
Query: 282 PFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVL 336
           P+   T   +   + +G   +  +       E  +L++      PY R +  ++L
Sbjct: 238 PYCGMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 289

>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast Calmodulin Length = 77

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           + NL ++Q+A+ K+ F + D D NG ++  EL   +  +G   S+ +V  LM   DVDGN
Sbjct: 1   SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60
Query: 438 GLLSCDEFVT-MSVHLK 453
             +   EF+  MS  LK
Sbjct: 61  HQIEFSEFLALMSRQLK 77

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 112/284 (39%), Gaps = 33/284 (11%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRH 137
           ++ +FGK LG G FG   +       ++ A   +A + LK    + +   +  E++++ +
Sbjct: 46  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAV-------- 187
           L  H NIV    A        ++ E C  G+L + +  K       + + A+        
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 188 --------GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
                      + + +        +HRDL   N L   G      K  DFGL+   K   
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLARHIKNDS 222
Query: 240 QFCEIVGSPY----YMAPE-VLRRNYGPEIDVWSAGVIIYILL-CGVPPFWAETEEGIAH 293
            +  + G+      +MAPE +    Y  E DVWS G+ ++ L   G  P+     +   +
Sbjct: 223 NYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 281
Query: 294 AIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
            +I  K  F          E  +++K   D +P  R T +++++
Sbjct: 282 KMI--KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 112/284 (39%), Gaps = 33/284 (11%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRH 137
           ++ +FGK LG G FG   +       ++ A   +A + LK    + +   +  E++++ +
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAV-------- 187
           L  H NIV    A        ++ E C  G+L + +  K       + + A+        
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 188 --------GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
                      + + +        +HRDL   N L   G      K  DFGL+   K   
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLARDIKNDS 199
Query: 240 QFCEIVGSPY----YMAPE-VLRRNYGPEIDVWSAGVIIYILL-CGVPPFWAETEEGIAH 293
            +  + G+      +MAPE +    Y  E DVWS G+ ++ L   G  P+     +   +
Sbjct: 200 NYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 258
Query: 294 AIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
            +I  K  F          E  +++K   D +P  R T +++++
Sbjct: 259 KMI--KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300

>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean Calmodulin Isoform 4 Fused With The Calmodulin-Binding Domain Of Ntmkp1 Length = 92

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 50/74 (67%)
Query: 380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGL 439
           ++  D   ++K+ F + D D+NG ++  EL+  +  +G+K++D +V+ +++ AD+DG+G 
Sbjct: 2   HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 440 LSCDEFVTMSVHLK 453
           ++ +EFV M + ++
Sbjct: 62  VNYEEFVKMMMTVR 75

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 32/235 (13%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEI------------DIDDVR 129
           +Y   ++LG G F       ++      A K +  +K+ TE             D D+ +
Sbjct: 20  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 130 REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA-----A 184
            +     H+ K  +   +K      + +++VM     GE    ++ K  Y  R       
Sbjct: 80  EDSMGANHILKLLDHFNHK----GPNGVHVVMVFEVLGENLLALIKK--YEHRGIPLIYV 133
Query: 185 AAVGKTILRIVKVCHEN-GVMHRDLKPENFL--FADGSENS-QLKAIDFGLSIFFKPGEQ 240
             + K +L  +   H   G++H D+KPEN L    D  EN  Q+K  D G + ++   E 
Sbjct: 134 KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EH 191
Query: 241 FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHA 294
           +   + +  Y +PEVL    +G   D+WS   +I+ L+ G   F  E +EG ++ 
Sbjct: 192 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG--DFLFEPDEGHSYT 244

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 99/235 (42%), Gaps = 32/235 (13%)
Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEI------------DIDDVR 129
           +Y   ++LG G F       ++      A K +  +K+ TE             D D+ +
Sbjct: 20  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 130 REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA-----A 184
            +     H+ K  +   +K      + +++VM     GE    ++ K  Y  R       
Sbjct: 80  EDSMGANHILKLLDHFNHK----GPNGVHVVMVFEVLGENLLALIKK--YEHRGIPLIYV 133
Query: 185 AAVGKTILRIVKVCHEN-GVMHRDLKPENFL--FADGSENS-QLKAIDFGLSIFFKPGEQ 240
             + K +L  +   H   G++H D+KPEN L    D  EN  Q+K  D G + ++   E 
Sbjct: 134 KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EH 191
Query: 241 FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHA 294
           +   + +  Y +PEVL    +G   D+WS   +I+ L+ G   F  E +EG ++ 
Sbjct: 192 YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG--DFLFEPDEGHSYT 244

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 112/284 (39%), Gaps = 33/284 (11%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRH 137
           ++ +FGK LG G FG   +       ++ A   +A + LK    + +   +  E++++ +
Sbjct: 39  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAV-------- 187
           L  H NIV    A        ++ E C  G+L + +  K       + + A+        
Sbjct: 99  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 188 --------GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
                      + + +        +HRDL   N L   G      K  DFGL+   K   
Sbjct: 159 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLARDIKNDS 215
Query: 240 QFCEIVGSPY----YMAPE-VLRRNYGPEIDVWSAGVIIYILL-CGVPPFWAETEEGIAH 293
            +  + G+      +MAPE +    Y  E DVWS G+ ++ L   G  P+     +   +
Sbjct: 216 NYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 274
Query: 294 AIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
            +I  K  F          E  +++K   D +P  R T +++++
Sbjct: 275 KMI--KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 316

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           + P++V   +  E    +Y+   L  G +L   +  +G      A A+ + I   +   H
Sbjct: 92  QEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAH 151
Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE--QFCEIVGSPYYMAPEVLR 257
             G  HRD+KPEN L    S +     +DFG++      +  Q    VG+ YY APE   
Sbjct: 152 AAGATHRDVKPENILV---SADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFS 208
Query: 258 RNYGP-EIDVWSAGVIIYILLCGVPPFWAE 286
            ++     D+++   ++Y  L G PP+  +
Sbjct: 209 ESHATYRADIYALTCVLYECLTGSPPYQGD 238

>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman Length = 100

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 47/69 (68%)
Query: 380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGL 439
           ++P+D++ +I++ F + D D NG ++ +EL   +  +G   ++ +++++++  D+DG+G 
Sbjct: 29  DIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQ 88
Query: 440 LSCDEFVTM 448
           +  +EFVT+
Sbjct: 89  VDFEEFVTL 97

>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes Octocarinatus Centrin Length = 77

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L ++Q  +IK+ F + DT+K G + + ELK  +  +G  V  P++  LM   D +GNG +
Sbjct: 1   LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 441 SCDEFVTMSVHLKRIGNDD 459
             D+F  + +  ++I N D
Sbjct: 61  GFDDF--LDIMTEKIKNRD 77

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 112/284 (39%), Gaps = 33/284 (11%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRH 137
           ++ +FGK LG G FG   +       ++ A   +A + LK    + +   +  E++++ +
Sbjct: 41  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAV-------- 187
           L  H NIV    A        ++ E C  G+L + +  K       + + A+        
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 188 --------GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
                      + + +        +HRDL   N L   G      K  DFGL+   K   
Sbjct: 161 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLARDIKNDS 217
Query: 240 QFCEIVGSPY----YMAPE-VLRRNYGPEIDVWSAGVIIYILL-CGVPPFWAETEEGIAH 293
            +  + G+      +MAPE +    Y  E DVWS G+ ++ L   G  P+     +   +
Sbjct: 218 NYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 276
Query: 294 AIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
            +I  K  F          E  +++K   D +P  R T +++++
Sbjct: 277 KMI--KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 318

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 62/284 (21%), Positives = 112/284 (39%), Gaps = 33/284 (11%)
Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRH 137
           ++ +FGK LG G FG   +       ++ A   +A + LK    + +   +  E++++ +
Sbjct: 46  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAV-------- 187
           L  H NIV    A        ++ E C  G+L + +  K       + + A+        
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 188 --------GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
                      + + +        +HRDL   N L   G      K  DFGL+   K   
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLARDIKNDS 222
Query: 240 QFCEIVGSPY----YMAPE-VLRRNYGPEIDVWSAGVIIYILL-CGVPPFWAETEEGIAH 293
            +  + G+      +MAPE +    Y  E DVWS G+ ++ L   G  P+     +   +
Sbjct: 223 NYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 281
Query: 294 AIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
            +I  K  F          E  +++K   D +P  R T +++++
Sbjct: 282 KMI--KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323

>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain Length = 76

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 43/70 (61%)
Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
           D L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGNG
Sbjct: 2   DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 439 LLSCDEFVTM 448
            +   EF+TM
Sbjct: 62  TIDFPEFLTM 71

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 30/265 (11%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIV 145
           + LG G+FG      E+  G      K+A + LK   +  D    E  +M+ L +H  +V
Sbjct: 25  ERLGAGQFG------EVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLV 77
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGV 203
               A   ++ IY++ E  E G L D +        T      +   I   +    E   
Sbjct: 78  RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 136
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRNY 260
           +HRDL+  N L +D       K  DFGL+   +  E +    G+ +   + APE +  NY
Sbjct: 137 IHRDLRAANILVSD---TLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NY 190
Query: 261 GP---EIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
           G    + DVWS G+++  I+  G  P+   T   +   + RG      D  P   +E  +
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP---EELYQ 247
Query: 317 LVKNMLDPNPYNRLT---LEEVLEN 338
           L++      P +R T   L  VLE+
Sbjct: 248 LMRLCWKERPEDRPTFDYLRSVLED 272

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 30/265 (11%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIV 145
           + LG G+FG      E+  G      K+A + LK   +  D    E  +M+ L +H  +V
Sbjct: 29  ERLGAGQFG------EVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLV 81
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGV 203
               A   ++ IY++ E  E G L D +        T      +   I   +    E   
Sbjct: 82  RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 140
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRNY 260
           +HRDL+  N L +D       K  DFGL+   +  E +    G+ +   + APE +  NY
Sbjct: 141 IHRDLRAANILVSD---TLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NY 194
Query: 261 GP---EIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
           G    + DVWS G+++  I+  G  P+   T   +   + RG      D  P   +E  +
Sbjct: 195 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP---EELYQ 251
Query: 317 LVKNMLDPNPYNRLT---LEEVLEN 338
           L++      P +R T   L  VLE+
Sbjct: 252 LMRLCWKERPEDRPTFDYLRSVLED 276

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 30/265 (11%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIV 145
           + LG G+FG      E+  G      K+A + LK   +  D    E  +M+ L +H  +V
Sbjct: 14  ERLGAGQFG------EVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLV 66
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGV 203
               A   ++ IY++ E  E G L D +        T      +   I   +    E   
Sbjct: 67  RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 125
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRNY 260
           +HRDL+  N L +D       K  DFGL+   +  E +    G+ +   + APE +  NY
Sbjct: 126 IHRDLRAANILVSD---TLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NY 179
Query: 261 GP---EIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
           G    + DVWS G+++  I+  G  P+   T   +   + RG      D  P   +E  +
Sbjct: 180 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP---EELYQ 236
Query: 317 LVKNMLDPNPYNRLT---LEEVLEN 338
           L++      P +R T   L  VLE+
Sbjct: 237 LMRLCWKERPEDRPTFDYLRSVLED 261

>pdb|3GNI|B Chain B, Structure Of Strad And Mo25 Length = 389

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 22/194 (11%)
Query: 105 TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELC 164
           TGE    ++I  E    E+ +  ++ E+ + + L  HPNIV Y+  +   + +++V    
Sbjct: 51  TGEYVTVRRINLEACSNEM-VTFLQGELHVSK-LFNHPNIVPYRATFIADNELWVVTSFM 108
Query: 165 EGGELFDRIVNKGHY----TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA-DGS 219
             G   D I    H+     E A A + + +L+ +   H  G +HR +K  + L + DG 
Sbjct: 109 AYGSAKDLICT--HFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG- 165
Query: 220 ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY-------MAPEVLRRN---YGPEIDVWSA 269
               L  +   LS+    G++   +   P Y       ++PEVL++N   Y  + D++S 
Sbjct: 166 -KVYLSGLRSNLSM-ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSV 223
Query: 270 GVIIYILLCGVPPF 283
           G+    L  G  PF
Sbjct: 224 GITACELANGHVPF 237

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 23/222 (10%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIV 145
           K LG G+FG      E+  G      K+A + LK   + +     E  +M+ L +H  +V
Sbjct: 19  KRLGAGQFG------EVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTL-QHDKLV 71
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGV 203
                   ++ IY++ E    G L D + +   G             I   +        
Sbjct: 72  RLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY 131
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRNY 260
           +HRDL+  N L    SE+   K  DFGL+   +  E +    G+ +   + APE +  N+
Sbjct: 132 IHRDLRAANVLV---SESLMCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPEAI--NF 185
Query: 261 GP---EIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           G    + DVWS G+++Y I+  G  P+   T   +  A+ +G
Sbjct: 186 GCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQG 227

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 30/265 (11%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIV 145
           + LG G+FG      E+  G      K+A + LK   +  D    E  +M+ L +H  +V
Sbjct: 24  ERLGAGQFG------EVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLV 76
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGV 203
               A   ++ IY++ E  E G L D +        T      +   I   +    E   
Sbjct: 77  RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 135
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRNY 260
           +HRDL+  N L +D       K  DFGL+   +  E +    G+ +   + APE +  NY
Sbjct: 136 IHRDLRAANILVSD---TLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NY 189
Query: 261 GP---EIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
           G    + DVWS G+++  I+  G  P+   T   +   + RG      D  P   +E  +
Sbjct: 190 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP---EELYQ 246
Query: 317 LVKNMLDPNPYNRLT---LEEVLEN 338
           L++      P +R T   L  VLE+
Sbjct: 247 LMRLCWKERPEDRPTFDYLRSVLED 271

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 63/260 (24%), Positives = 107/260 (41%), Gaps = 44/260 (16%)
Query: 62  SISFQLRSVVSNPAEGNILDKYTFGKELGRGEFG--ITHQCFEIE--TGETYACKKIAKE 117
           S+S     ++ +P           GK LG GEFG  +    F ++   G T    K+ KE
Sbjct: 4   SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 118 KLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELF-----DR 172
              +  ++ D+  E  +++ +  HP+++    A      + L++E  + G L       R
Sbjct: 64  N-ASPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESR 121
Query: 173 IVNKG--------------HYTERAAA-----AVGKTILRIVKVCHENGVMHRDLKPENF 213
            V  G              H  ERA       +    I + ++   E  ++HRDL   N 
Sbjct: 122 KVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNI 181
Query: 214 LFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRN-YGPEIDVWSA 269
           L A+G    ++K  DFGLS      + + +         +MA E L  + Y  + DVWS 
Sbjct: 182 LVAEG---RKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
Query: 270 GVIIYILLC-------GVPP 282
           GV+++ ++        G+PP
Sbjct: 239 GVLLWEIVTLGGNPYPGIPP 258

>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 373

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 22/194 (11%)
Query: 105 TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELC 164
           TGE    ++I  E    E+ +  ++ E+ + + L  HPNIV Y+  +   + +++V    
Sbjct: 35  TGEYVTVRRINLEACSNEM-VTFLQGELHVSK-LFNHPNIVPYRATFIADNELWVVTSFM 92
Query: 165 EGGELFDRIVNKGHY----TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA-DGS 219
             G   D I    H+     E A A + + +L+ +   H  G +HR +K  + L + DG 
Sbjct: 93  AYGSAKDLICT--HFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG- 149
Query: 220 ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY-------MAPEVLRRN---YGPEIDVWSA 269
               L  +   LS+    G++   +   P Y       ++PEVL++N   Y  + D++S 
Sbjct: 150 -KVYLSGLRSNLSM-ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSV 207
Query: 270 GVIIYILLCGVPPF 283
           G+    L  G  PF
Sbjct: 208 GITACELANGHVPF 221

>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d Calmodulin Refined With Paramagnetism Based Strategy Length = 79

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 44/71 (61%)
Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DG+
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 438 GLLSCDEFVTM 448
           G +   EF+TM
Sbjct: 61  GTIDFPEFLTM 71

>pdb|2LMT|A Chain A, Nmr Structure Of Androcam Length = 148

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L ++Q+A+ K  F   D +  G +   EL   +  +GQ  ++ +++ L+  A+ + NG L
Sbjct: 4   LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQL 63
Query: 441 SCDEFV-TMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
           +  EF   M+  ++    ++ + +AF+ FD++  GFI
Sbjct: 64  NFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFI 100

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/248 (21%), Positives = 96/248 (38%), Gaps = 44/248 (17%)
Query: 80  LDKYTFGKELGRGEFGITHQ--CFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           L    F +ELG   FG  ++   F    GE      I   K K E  + +  R   ++R 
Sbjct: 25  LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRA 84
Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI---LRI 194
             +HPN+V           + ++   C  G+L + +V +  +++  +    +T+   L  
Sbjct: 85  RLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP 144
Query: 195 VKVCH-------------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF 241
               H              + V+H+DL   N L  D      +K  D GL         F
Sbjct: 145 PDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYD---KLNVKISDLGL---------F 192
Query: 242 CEIVGSPYY------------MAPE-VLRRNYGPEIDVWSAGVIIY-ILLCGVPPFWAET 287
            E+  + YY            MAPE ++   +  + D+WS GV+++ +   G+ P+   +
Sbjct: 193 REVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS 252
Query: 288 EEGIAHAI 295
            + +   I
Sbjct: 253 NQDVVEMI 260

>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax Cdpk, Pvx_11610 Length = 196

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Query: 355 NVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLN 414
           +V    K +++M +F+K  + ++A       + ++K  F  +D +  G++T  +L+ GL 
Sbjct: 23  HVLENFKNYALMLRFQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRKGLE 82
Query: 415 MIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSG 474
             G  +  P+  +L++  D DG+G +   EF+  ++  +++    ++  AFR FD +  G
Sbjct: 83  RSGLMLP-PNFDLLLDQIDSDGSGNIDYTEFLAAAIDRRQLSK-KLIYCAFRVFDVDNDG 140
Query: 475 FI 476
            I
Sbjct: 141 EI 142

>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp Length = 69

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
           D   +I++ F + D D NG ++  EL+  +  +G+K++D +V  ++  AD+DG+G ++ +
Sbjct: 2   DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 444 EFVTM 448
           EFV M
Sbjct: 62  EFVQM 66

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 30/265 (11%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIV 145
           + LG G+FG      E+  G      K+A + LK   +  D    E  +M+ L +H  +V
Sbjct: 19  ERLGAGQFG------EVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLV 71
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGV 203
               A   ++ IY++ E  E G L D +        T      +   I   +    E   
Sbjct: 72  RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRNY 260
           +HRDL+  N L +D       K  DFGL+   +  E +    G+ +   + APE +  NY
Sbjct: 131 IHRDLRAANILVSD---TLSCKIADFGLARLIEDNE-YTAREGAKFPIKWTAPEAI--NY 184
Query: 261 GP---EIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
           G    + DVWS G+++  I+  G  P+   T   +   + RG      D  P   +E  +
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP---EELYQ 241
Query: 317 LVKNMLDPNPYNRLT---LEEVLEN 338
           L++      P +R T   L  VLE+
Sbjct: 242 LMRLCWKERPEDRPTFDYLRSVLED 266

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 88  ELGRGEFGITHQ-CFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT 146
           ELG G FG   Q  + +   +     K+ K+  + + D +++ RE +IM  L  +P IV 
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQL-DNPYIVR 400
Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI---VKVCHENGV 203
                +  +A+ LVME+  GG L   +V K    E   + V + + ++   +K   E   
Sbjct: 401 LIGVCQ-AEALMLVMEMAGGGPLHKFLVGKRE--EIPVSNVAELLHQVSMGMKYLEEKNF 457
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS---PY-YMAPEVLR-R 258
           +HR+L   N L  +       K  DFGLS      + +     +   P  + APE +  R
Sbjct: 458 VHRNLAARNVLLVN---RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 514
Query: 259 NYGPEIDVWSAGVIIY 274
            +    DVWS GV ++
Sbjct: 515 KFSSRSDVWSYGVTMW 530

>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX Length = 149

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L ++Q  +I++ F + DTD +G +  +ELK  +  +G +    ++K ++   D DG+G +
Sbjct: 2   LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 441 SCDEFVTMSVHL--KRIGNDDILSQAFRFFDKNQSGFI 476
             +EF+ M      +R   ++I+ +AFR FD +++G I
Sbjct: 62  DFEEFLQMMTAKMGERDSREEIM-KAFRLFDDDETGKI 98

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 104/279 (37%), Gaps = 56/279 (20%)
Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH-LPKHPNIVTY 147
           +G+G +G   +   +  GE+ A K  +        D     RE EI    L +H NI+ +
Sbjct: 16  VGKGRYGEVWR--GLWHGESVAVKIFSSR------DEQSWFRETEIYNTVLLRHDNILGF 67
Query: 148 ----KEAYEDKDAIYLVMELCEGGELFD---RIVNKGHYTER----AAAAVGKTILRIVK 196
                 +      ++L+    E G L+D   R   + H   R    AA  +    + I  
Sbjct: 68  IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFG 127
Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI-----VGSPYYM 251
              +  + HRD K  N L      N Q    D GL++    G  + +I     VG+  YM
Sbjct: 128 TQGKPAIAHRDFKSRNVLV---KSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYM 184
Query: 252 APEVLRRNYGPEI-------DVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER 304
           APEVL      +        D+W+ G++++              E     I+ G ++  R
Sbjct: 185 APEVLDEQIRTDCFESYKWTDIWAFGLVLW--------------EIARRTIVNGIVEDYR 230
Query: 305 DPW-------PKVSKEAKELVKNMLDPNPYNRLTLEEVL 336
            P+       P      K +  +   P   NRL  + VL
Sbjct: 231 PPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVL 269

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 76/186 (40%), Gaps = 13/186 (6%)
Query: 121 TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGEL--FDRIVNKGH 178
           TE    D   E  IM     HPNI+  +          +V E  E G L  F R  + G 
Sbjct: 90  TERQRRDFLSEASIMGQF-DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQ 147
Query: 179 YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-- 236
           +T      + + +   ++   + G +HRDL   N L      N   K  DFGLS   +  
Sbjct: 148 FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDD 204
Query: 237 PGEQFCEIVGS-PY-YMAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIA 292
           P        G  P  + APE +  R +    DVWS GV+++ +L  G  P+W  T   + 
Sbjct: 205 PDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
Query: 293 HAIIRG 298
            ++  G
Sbjct: 265 SSVEEG 270

>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate Length = 67

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
           D   +I++ F + D D NG ++  EL+  +  +G+K++D +V  ++  AD+DG+G ++ +
Sbjct: 2   DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 444 EFVTM 448
           EFV M
Sbjct: 62  EFVQM 66

>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin To 1.7 A Resolution Length = 71

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
           D   +I++ F + D D NG ++  EL+  +  +G+K++D +V  ++  AD+DG+G ++ +
Sbjct: 3   DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 62
Query: 444 EFVTM 448
           EFV M
Sbjct: 63  EFVQM 67

>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin Isoform 4 C-Terminal Domain Length = 70

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 48/70 (68%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
           D   ++K+ F + D D+NG ++  EL+  +  +G+K++D +V+ +++ AD+DG+G ++ +
Sbjct: 1   DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 444 EFVTMSVHLK 453
           EFV M + ++
Sbjct: 61  EFVKMMMTVR 70

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 108/260 (41%), Gaps = 44/260 (16%)
Query: 62  SISFQLRSVVSNPAEGNILDKYTFGKELGRGEFG--ITHQCFEIE--TGETYACKKIAKE 117
           S+S     ++ +P           GK LG GEFG  +    F ++   G T    K+ KE
Sbjct: 4   SLSVDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE 63
Query: 118 KLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELF-----DR 172
              +  ++ D+  E  +++ +  HP+++    A      + L++E  + G L       R
Sbjct: 64  N-ASPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESR 121
Query: 173 IVNKG--------------HYTERAAA-----AVGKTILRIVKVCHENGVMHRDLKPENF 213
            V  G              H  ERA       +    I + ++   E  ++HRDL   N 
Sbjct: 122 KVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNI 181
Query: 214 LFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGS-PY-YMAPEVLRRN-YGPEIDVWSA 269
           L A+G    ++K  DFGLS   ++         G  P  +MA E L  + Y  + DVWS 
Sbjct: 182 LVAEG---RKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSF 238
Query: 270 GVIIYILLC-------GVPP 282
           GV+++ ++        G+PP
Sbjct: 239 GVLLWEIVTLGGNPYPGIPP 258

>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain Length = 67

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 41/61 (67%)
Query: 388 QIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVT 447
           +I++ F + D D NG ++  EL+  +  +G+K++D +V  ++  AD+DG+G ++ +EFV 
Sbjct: 3   EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 62
Query: 448 M 448
           M
Sbjct: 63  M 63

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 110/265 (41%), Gaps = 30/265 (11%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIV 145
           + LG G+FG      E+  G      K+A + LK   +  D    E  +M+ L +H  +V
Sbjct: 27  ERLGAGQFG------EVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLV 79
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGV 203
               A   ++ IY++ E  E G L D +        T      +   I   +    E   
Sbjct: 80  RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 138
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRNY 260
           +HRDL+  N L +D       K  DFGL+   +  E      G+ +   + APE +  NY
Sbjct: 139 IHRDLRAANILVSD---TLSCKIADFGLARLIEDNEXTAR-EGAKFPIKWTAPEAI--NY 192
Query: 261 GP---EIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
           G    + DVWS G+++  I+  G  P+   T   +   + RG      D  P   +E  +
Sbjct: 193 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP---EELYQ 249
Query: 317 LVKNMLDPNPYNRLT---LEEVLEN 338
           L++      P +R T   L  VLE+
Sbjct: 250 LMRLCWKERPEDRPTFDYLRSVLED 274

>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella Pertussis In Presence Of C-Terminal Calmodulin And 1mm Calcium Chloride Length = 74

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
           D   +I++ F + D D NG ++  EL+  +  +G+K++D +V  ++  AD+DG+G ++ +
Sbjct: 6   DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 65
Query: 444 EFVTM 448
           EFV M
Sbjct: 66  EFVQM 70

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 110/265 (41%), Gaps = 30/265 (11%)
Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIV 145
           + LG G+FG      E+  G      K+A + LK   +  D    E  +M+ L +H  +V
Sbjct: 25  ERLGAGQFG------EVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL-QHQRLV 77
Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGV 203
               A   ++ IY++ E  E G L D +        T      +   I   +    E   
Sbjct: 78  RLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 136
Query: 204 MHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY---YMAPEVLRRNY 260
           +HRDL+  N L +D       K  DFGL+   +  E      G+ +   + APE +  NY
Sbjct: 137 IHRDLRAANILVSD---TLSCKIADFGLARLIEDNEXTAR-EGAKFPIKWTAPEAI--NY 190
Query: 261 GP---EIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
           G    + DVWS G+++  I+  G  P+   T   +   + RG      D  P   +E  +
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP---EELYQ 247
Query: 317 LVKNMLDPNPYNRLT---LEEVLEN 338
           L++      P +R T   L  VLE+
Sbjct: 248 LMRLCWKERPEDRPTFDYLRSVLED 272

>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal Domain Length = 73

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 42/65 (64%)
Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
           D   +I++ F + D D NG ++  EL+  +  +G+K++D +V  ++  AD+DG+G ++ +
Sbjct: 5   DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 64
Query: 444 EFVTM 448
           EFV M
Sbjct: 65  EFVQM 69
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	586
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	0.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	0.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	0.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	0.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	0.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-177
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-170
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-168
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-168
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-163
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-162
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-162
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-161
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-160
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-160
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	1e-160
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-159
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-159
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-159
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-158
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-158
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-156
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-155
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-154
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-154
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-150
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-150
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-150
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-149
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-144
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-141
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-140
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-137
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-104
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	9e-98
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	2e-91
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	5e-90
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-89
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-87
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	4e-87
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	7e-87
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	5e-86
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	5e-86
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	8e-86
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	9e-86
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-85
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	8e-85
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-84
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	6e-84
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-82
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-82
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	5e-82
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-81
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-81
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-81
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	5e-81
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	7e-81
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-80
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	3e-80
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-80
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-79
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-78
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	4e-78
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	5e-78
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	3e-77
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-76
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	6e-72
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	6e-72
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	7e-71
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-70
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-70
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	2e-67
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-65
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	1e-64
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-64
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-63
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	3e-61
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	3e-13
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	4e-61
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	5e-59
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	2e-57
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	3e-35
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	2e-08
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	7e-57
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	8e-57
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	2e-55
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	3e-52
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	8e-52
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	1e-51
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	5e-51
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	4e-49
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	5e-49
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	8e-49
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-48
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	5e-48
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-47
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-47
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	2e-47
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-47
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	4e-47
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	6e-47
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	1e-12
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	4e-08
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	7e-47
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	9e-47
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	1e-14
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	2e-11
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-46
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-46
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-46
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	5e-46
3fwb_A	161	Cell division control protein 31; gene gating, com	6e-46
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	7e-46
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	1e-45
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	2e-09
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-45
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-45
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	4e-45
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	6e-45
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	5e-10
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	7e-45
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	9e-45
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	9e-45
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	1e-44
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	1e-44
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	5e-17
2jnf_A	158	Troponin C; stretch activated muscle contraction,	2e-44
2jnf_A	158	Troponin C; stretch activated muscle contraction,	3e-10
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	4e-44
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	5e-44
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	7e-44
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	7e-44
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-07
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	8e-44
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	1e-43
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	1e-43
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	1e-43
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	1e-43
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	1e-42
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	1e-42
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	2e-42
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	3e-11
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	3e-42
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	1e-41
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-41
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	7e-41
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	2e-40
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	4e-40
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	2e-11
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	2e-07
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	6e-40
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	7e-40
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-39
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-39
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	3e-39
1y1x_A	191	Leishmania major homolog of programmed cell death	5e-39
1y1x_A	191	Leishmania major homolog of programmed cell death	1e-18
1y1x_A	191	Leishmania major homolog of programmed cell death	1e-16
2dyl_A	318	Dual specificity mitogen-activated protein kinase	7e-39
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-38
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	5e-38
3an0_A	340	Dual specificity mitogen-activated protein kinase;	6e-38
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	1e-37
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-37
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	6e-37
3o0g_A	292	Cell division protein kinase 5; kinase activator c	7e-37
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	7e-37
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	8e-37
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-36
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	2e-36
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-36
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	5e-36
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	6e-36
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	7e-36
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	7e-36
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-35
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	4e-35
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	1e-10
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	3e-08
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	4e-35
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-35
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	5e-35
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	9e-35
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	1e-34
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	1e-34
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	1e-16
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-34
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-34
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	2e-34
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	8e-34
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	1e-33
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	1e-33
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	5e-10
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	6e-10
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	6e-08
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	2e-33
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	3e-26
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	3e-11
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	1e-05
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	3e-33
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	4e-33
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	6e-33
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	2e-11
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	6e-33
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	2e-10
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	7e-33
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-32
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	2e-32
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	3e-11
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	2e-32
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	2e-32
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	4e-19
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	7e-17
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	3e-32
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	3e-11
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	4e-32
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	4e-32
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	6e-32
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	6e-32
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	6e-32
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	7e-32
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	8e-32
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	4e-12
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	9e-32
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	2e-10
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-31
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-31
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	4e-31
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	4e-13
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	8e-31
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	1e-30
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	7e-10
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	1e-30
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	4e-10
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	2e-09
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	2e-09
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	1e-30
2hps_A	186	Coelenterazine-binding protein with bound coelent;	2e-30
2hps_A	186	Coelenterazine-binding protein with bound coelent;	8e-12
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-30
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	2e-30
3ork_A	311	Serine/threonine protein kinase; structural genomi	3e-30
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	5e-30
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	5e-10
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	6e-30
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	1e-11
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	1e-29
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-29
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-29
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-29
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	3e-29
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	5e-29
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	7e-29
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	8e-24
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-28
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	3e-28
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	4e-28
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	4e-28
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	5e-28
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	6e-28
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	5e-08
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	6e-28
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	7e-28
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	3e-07
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	9e-28
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	1e-27
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	3e-22
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	2e-27
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	2e-27
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	6e-08
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	4e-27
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	2e-15
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	4e-27
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	6e-17
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	8e-09
3rp9_A	458	Mitogen-activated protein kinase; structural genom	6e-27
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-26
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	2e-26
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	5e-26
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	8e-26
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	1e-25
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	7e-10
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-25
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	2e-25
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	3e-08
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	2e-25
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	2e-22
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	4e-25
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	6e-25
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	3e-08
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	1e-24
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	7e-07
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	1e-24
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	3e-24
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	3e-14
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	3e-10
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	4e-24
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	5e-10
3soc_A	322	Activin receptor type-2A; structural genomics cons	5e-23
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	5e-23
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	3e-22
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	2e-22
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	4e-14
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	4e-12
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	2e-21
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	2e-14
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	3e-11
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	7e-21
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	8e-21
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	3e-09
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	4e-08
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	2e-07
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	9e-21
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	1e-07
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-20
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	3e-20
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	1e-06
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	5e-20
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	8e-20
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	4e-09
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	8e-20
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	1e-19
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	1e-06
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	2e-19
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	1e-10
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	2e-19
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	3e-19
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-19
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	5e-19
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	7e-12
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	8e-19
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	2e-12
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	1e-18
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	1e-09
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	1e-18
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	3e-09
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-18
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	4e-18
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	8e-14
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	4e-18
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	3e-08
3li6_A	66	Calcium-binding protein; calcium signaling protein	6e-18
3li6_A	66	Calcium-binding protein; calcium signaling protein	7e-13
3li6_A	66	Calcium-binding protein; calcium signaling protein	1e-08
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	9e-18
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	3e-13
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-17
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-17
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	4e-17
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	5e-17
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	6e-17
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	6e-17
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	9e-17
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	1e-16
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-16
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-16
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-16
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	1e-16
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	2e-16
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	8e-15
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-16
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	2e-16
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	2e-16
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-16
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	3e-16
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	1e-05
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	4e-16
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	2e-14
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	4e-16
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	4e-16
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	4e-16
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	4e-16
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	4e-16
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	5e-16
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	5e-16
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	5e-16
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	6e-16
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	3e-14
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	6e-16
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	7e-16
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	8e-16
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	8e-16
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	9e-16
4aoj_A	329	High affinity nerve growth factor receptor; transf	1e-15
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-15
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-15
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-15
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-15
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-15
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-15
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	3e-15
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	1e-14
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	3e-15
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	3e-15
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	3e-15
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-15
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	3e-15
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	4e-15
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	5e-15
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	6e-15
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	6e-15
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	1e-13
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	8e-15
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	1e-14
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	6e-14
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-14
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-14
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-14
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	5e-14
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	4e-13
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	5e-14
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	6e-14
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	1e-07
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	6e-14
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	2e-13
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	7e-14
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	1e-13
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-13
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-13
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-13
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	3e-13
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	4e-13
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	4e-13
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-11
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	2e-11
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	5e-07
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	1e-04
1c07_A	95	Protein (epidermal growth factor receptor pathway	1e-10
1c07_A	95	Protein (epidermal growth factor receptor pathway	2e-08
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	4e-10
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	3e-08
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	8e-10
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	2e-08
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	7e-08
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	1e-05
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	9e-10
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	1e-07
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	1e-09
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	3e-08
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	2e-09
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	7e-09
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	3e-08
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	3e-07
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	9e-07
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	3e-04
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	9e-07
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	1e-04
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	2e-06
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	3e-06
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	2e-06
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	2e-05
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	4e-06
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	2e-04
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	5e-06
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	5e-06
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	7e-06
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	8e-04
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	4e-05
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	1e-04
1a4p_A	96	S100A10; S100 family, EF-hand protein, ligand of a	2e-04
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	2e-04
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	5e-04
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	6e-04
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	8e-04

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  639 bits (1649), Expect = 0.0
 Identities = 154/504 (30%), Positives = 256/504 (50%), Gaps = 27/504 (5%)

Query: 48  HESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGE 107
           H   S    N+  + I+      V    EG I + Y   ++LG G +G    C E     
Sbjct: 4   HHHHSSGRENLYFQGIAINPGMYVRKK-EGKIGESYFKVRKLGSGAYGEVLLCKEKNGHS 62

Query: 108 TYACKKIAKEKLKT----------EIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI 157
             A K I K +             E   +++  E+ +++ L  HPNI+   + +EDK   
Sbjct: 63  EKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPNIIKLFDVFEDKKYF 121

Query: 158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFAD 217
           YLV E  EGGELF++I+N+  + E  AA + K IL  +   H++ ++HRD+KPEN L  +
Sbjct: 122 YLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLEN 181

Query: 218 GSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILL 277
            +    +K +DFGLS FF    +  + +G+ YY+APEVL++ Y  + DVWS GVI+YILL
Sbjct: 182 KNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILL 241

Query: 278 CGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
           CG PPF  + ++ I   + +GK  F+ + W  +S EAKEL+K ML  +   R T EE L 
Sbjct: 242 CGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301

Query: 338 NPWIKNDN---HAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNL-PQDQMAQIKQMF 393
           + WIK      +  +        S +++F    K  +  +  +   L   ++  ++  +F
Sbjct: 302 SRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIF 361

Query: 394 YMMDTDKNGDLTFEELKDGLNMIGQ--------KVSDPDVKMLMEAADVDGNGLLSCDEF 445
             +D + +G L  +EL +G N++          K  + +V  +++  D D NG +   EF
Sbjct: 362 KKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEF 421

Query: 446 VTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDV 505
           +++ +  + + +++ L +AF  FD ++SG I  +EL  +          ++T  D+L + 
Sbjct: 422 ISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANLF---GLTSISEKTWNDVLGEA 478

Query: 506 DLDRDGRISFEEFKAMMTSGADWK 529
           D ++D  I F+EF +MM    D K
Sbjct: 479 DQNKDNMIDFDEFVSMMHKICDHK 502

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  632 bits (1631), Expect = 0.0
 Identities = 151/471 (32%), Positives = 246/471 (52%), Gaps = 22/471 (4%)

Query: 76  EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           +G   ++Y     LG+G FG   +C +  T + YA K I K   K + D   + REVE++
Sbjct: 17  QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELL 75

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
           + L  HPNI+   E  ED  + Y+V EL  GGELFD I+ +  ++E  AA + K +   +
Sbjct: 76  KKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGI 134

Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
              H++ ++HRDLKPEN L     ++  +K IDFGLS  F+   +  + +G+ YY+APEV
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194

Query: 256 LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
           LR  Y  + DVWSAGVI+YILL G PPF+ + E  I   +  GK  F+   W  +S +AK
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAK 254

Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIKN----DNHAPNVSLGGNVTSRIKQFSIMNKFKK 371
           +L++ ML  +P  R+T  + LE+PWI+          ++    +  + I+QF    K  +
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQ 314

Query: 372 KVLRVVADNL-PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI-------------- 416
             L  +A  L   D+  Q+ ++F  +DT+ +G L  +EL  G +                
Sbjct: 315 AALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQN 374

Query: 417 GQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
                +  +  LM   D+DG+G +   EF+  ++    + + + + +AF+ FDK+ SG I
Sbjct: 375 EGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKI 434

Query: 477 EVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGAD 527
              EL ++  + ++     + +  I+  VD ++DG + F EF  M+ +   
Sbjct: 435 STKELFKLFSQADSSIQ-MEELESIIEQVDNNKDGEVDFNEFVEMLQNFVR 484

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  630 bits (1628), Expect = 0.0
 Identities = 158/483 (32%), Positives = 256/483 (53%), Gaps = 20/483 (4%)

Query: 60  KKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL 119
              +       V +       D+Y   + LG+G FG    C +  TG+  A K I+K ++
Sbjct: 6   MDHLHATPGMFVQHS-TAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQV 64

Query: 120 KTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY 179
           K + D + + REV++++ L  HPNI+   E +EDK   YLV E+  GGELFD I+++  +
Sbjct: 65  KQKTDKESLLREVQLLKQL-DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRF 123

Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           +E  AA + + +L  +   H+N ++HRDLKPEN L    S+++ ++ IDFGLS  F+  +
Sbjct: 124 SEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183

Query: 240 QFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK 299
           +  + +G+ YY+APEVL   Y  + DVWS GVI+YILL G PPF    E  I   + +GK
Sbjct: 184 KMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGK 243

Query: 300 IDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN---DNHAPNVSLGGNV 356
             FE   W KVS+ AK+L++ ML   P  R++  + L++ WI+    +  + +V    N 
Sbjct: 244 YTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNA 303

Query: 357 TSRIKQFSIMNKFKKKVLRVVADNLP-QDQMAQIKQMFYMMDTDKNGDLTFEELKDGL-- 413
              I+QF    K  +  L  +   L  QD+  ++  +F+ MD + +G L   EL +G   
Sbjct: 304 ILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKE 363

Query: 414 ---------NMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQA 464
                    +M+     + +V  +++A D D NG +   EFVT+++  K + + + L +A
Sbjct: 364 LMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERA 423

Query: 465 FRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           FR FD + SG I   EL  +           +T + +L +VD + DG + F+EF+ M+  
Sbjct: 424 FRMFDSDNSGKISSTELATIF---GVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLK 480

Query: 525 GAD 527
              
Sbjct: 481 LCG 483

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  622 bits (1605), Expect = 0.0
 Identities = 156/489 (31%), Positives = 259/489 (52%), Gaps = 19/489 (3%)

Query: 47  KHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETG 106
            H   S   +   +  +       +++  +G++ + Y   K+LG G +G    C +  T 
Sbjct: 4   HHHHSSGRENLYFQGDLQATPGMFITSK-KGHLSEMYQRVKKLGSGAYGEVLLCRDKVTH 62

Query: 107 ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG 166
              A K I K  + T      +  EV +++ L  HPNI+   + +EDK   YLVME  +G
Sbjct: 63  VERAIKIIRKTSVSTS-SNSKLLEEVAVLKLL-DHPNIMKLYDFFEDKRNYYLVMECYKG 120

Query: 167 GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKA 226
           GELFD I+++  + E  AA + K +L  V   H++ ++HRDLKPEN L     +++ +K 
Sbjct: 121 GELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKI 180

Query: 227 IDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAE 286
           +DFGLS  F+  ++  E +G+ YY+APEVLR+ Y  + DVWS GVI++ILL G PPF  +
Sbjct: 181 VDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQ 240

Query: 287 TEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH 346
           T++ I   + +GK  F+   W  VS+ AK+L+K ML  +   R++ ++ LE+PWIK    
Sbjct: 241 TDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCS 300

Query: 347 AP----NVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNL-PQDQMAQIKQMFYMMDTDKN 401
                  +    N    +++F    K  +  L  +A  L  Q++  ++  +F  +D + +
Sbjct: 301 KKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGD 360

Query: 402 GDLTFEELKDGLNMIGQK--------VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLK 453
           G L  +EL DG + +  +          + +V  ++ AAD D NG +   EFVT+++  K
Sbjct: 361 GQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRK 420

Query: 454 RIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRI 513
            + + D L  AF+ FD++ +G I VDEL  V           +T ++++  +D + DG +
Sbjct: 421 SLLSKDKLESAFQKFDQDGNGKISVDELASVF---GLDHLESKTWKEMISGIDSNNDGDV 477

Query: 514 SFEEFKAMM 522
            FEEF  M+
Sbjct: 478 DFEEFCKMI 486

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  583 bits (1504), Expect = 0.0
 Identities = 134/455 (29%), Positives = 211/455 (46%), Gaps = 24/455 (5%)

Query: 77  GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMR 136
               ++Y   +ELG+G F +  +C ++  G+ YA   I  +KL    D   + RE  I R
Sbjct: 7   TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSAR-DHQKLEREARICR 65

Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
            L KHPNIV   ++  ++   YL+ +L  GGELF+ IV + +Y+E  A+   + IL  V 
Sbjct: 66  LL-KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL 124

Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQFCEIVGSPYYMAPEV 255
            CH+ GV+HR+LKPEN L A   + + +K  DFGL+I  +   + +    G+P Y++PEV
Sbjct: 125 HCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEV 184

Query: 256 LRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           LR++ YG  +D+W+ GVI+YILL G PPFW E +  +   I  G  DF    W  V+ EA
Sbjct: 185 LRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 244

Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVL 374
           K+L+  ML  NP  R+T  E L++PWI + +   +          +K+F+   K K  +L
Sbjct: 245 KDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAIL 304

Query: 375 RVVADN--LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAA 432
            V+         +   IK    +++   NGD               K+ DP +      A
Sbjct: 305 TVMLATRNFSVRKQEIIKVTEQLIEAISNGDFE----------SYTKMCDPGMTAFEPEA 354

Query: 433 DVDGNGLLSCDEFVTMSVHLKRIGND-DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAG 491
             +    L    F   ++  +        +         ++S  I    + + L      
Sbjct: 355 LGNLVEGLDFHRFYFENLWSRNSKPVHTTILNPHIHLMGDESACIAYIRITQYLDAGGI- 413

Query: 492 PNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGA 526
               +T +     V   RDG+    +      SGA
Sbjct: 414 ---PRTAQSEETRVWHRRDGKW---QIVHFHRSGA 442

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  504 bits (1300), Expect = e-177
 Identities = 114/366 (31%), Positives = 182/366 (49%), Gaps = 8/366 (2%)

Query: 54  HASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKK 113
           H +++       +    + N +     D Y   +ELG+G F +  +C    TG  +A K 
Sbjct: 3   HMASMTGGQQMGRGSEFMMNAS-TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKI 61

Query: 114 IAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI 173
           I  +KL    D   + RE  I R L +HPNIV   ++ +++   YLV +L  GGELF+ I
Sbjct: 62  INTKKLSAR-DFQKLEREARICRKL-QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 119

Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI 233
           V +  Y+E  A+   + IL  +  CH NG++HR+LKPEN L A  ++ + +K  DFGL+I
Sbjct: 120 VAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179

Query: 234 FFKPGEQFCEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIA 292
                E +    G+P Y++PEVL+++ Y   +D+W+ GVI+YILL G PPFW E +  + 
Sbjct: 180 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY 239

Query: 293 HAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSL 352
             I  G  D+    W  V+ EAK L+ +ML  NP  R+T ++ L+ PWI N     +   
Sbjct: 240 AQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIH 299

Query: 353 GGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDG 412
             +    +K+F+   K K  +L  +        ++ + +               +E  + 
Sbjct: 300 RQDTVDCLKKFNARRKLKGAILTTMIATR---NLSNLGRNLLNKKEQGPPSTI-KESSES 355

Query: 413 LNMIGQ 418
              I  
Sbjct: 356 SQTIDD 361

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  485 bits (1251), Expect = e-170
 Identities = 105/349 (30%), Positives = 172/349 (49%), Gaps = 11/349 (3%)

Query: 60  KKSISFQLRSVVSNPAE-GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEK 118
              IS     ++    +     D Y   + +G+G F +  +C   ETG+ +A K +   K
Sbjct: 2   SPGISGGGGGILDMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAK 61

Query: 119 LKTE--IDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK 176
             +   +  +D++RE  I   L KHP+IV   E Y     +Y+V E  +G +L   IV +
Sbjct: 62  FTSSPGLSTEDLKREASICHML-KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKR 120

Query: 177 GH----YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS 232
                 Y+E  A+   + IL  ++ CH+N ++HRD+KP   L A    ++ +K   FG++
Sbjct: 121 ADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180

Query: 233 I-FFKPGEQFCEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEG 290
           I   + G      VG+P++MAPEV++R  YG  +DVW  GVI++ILL G  PF+  T+E 
Sbjct: 181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKER 239

Query: 291 IAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNV 350
           +   II+GK       W  +S+ AK+LV+ ML  +P  R+T+ E L +PW+K  +     
Sbjct: 240 LFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYK 299

Query: 351 SLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTD 399
                   ++++F+   K K  VL  V+ +          +       D
Sbjct: 300 IHLPETVEQLRKFNARRKLKGAVLAAVSSHKFNSFYGDPPEELPDFSED 348

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  481 bits (1240), Expect = e-168
 Identities = 125/352 (35%), Positives = 187/352 (53%), Gaps = 10/352 (2%)

Query: 31  NNKRNDASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELG 90
           ++  + +     + +   +S+S   ++    + S      +       + D +    ELG
Sbjct: 3   HHHHHSSGVDLGTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELG 62

Query: 91  RGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEA 150
           RG   I ++C +  T + YA K + K       D   VR E+ ++  L  HPNI+  KE 
Sbjct: 63  RGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRL-SHPNIIKLKEI 116

Query: 151 YEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKP 210
           +E    I LV+EL  GGELFDRIV KG+Y+ER AA   K IL  V   HENG++HRDLKP
Sbjct: 117 FETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKP 176

Query: 211 ENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSA 269
           EN L+A  + ++ LK  DFGLS   +       + G+P Y APE+LR   YGPE+D+WS 
Sbjct: 177 ENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSV 236

Query: 270 GVIIYILLCGVPPFWAET-EEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYN 328
           G+I YILLCG  PF+ E  ++ +   I+  +  F    W +VS  AK+LV+ ++  +P  
Sbjct: 237 GIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKK 296

Query: 329 RLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADN 380
           RLT  + L++PW+     A N         ++++F+   K K  V  VVA +
Sbjct: 297 RLTTFQALQHPWVTGK--AANFVHMDTAQKKLQEFNARRKLKAAVKAVVASS 346

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  479 bits (1234), Expect = e-168
 Identities = 112/331 (33%), Positives = 172/331 (51%), Gaps = 16/331 (4%)

Query: 76  EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREV 132
           + N+ D Y  G+ELG G+F +  +C E  TG  YA K I K + K+    +  +D+ REV
Sbjct: 6   QENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV 65

Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
            I++ + +HPN++T  E YE+K  + L++EL  GGELFD +  K   TE  A    K IL
Sbjct: 66  SILKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124

Query: 193 RIVKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
             V   H   + H DLKPEN +  D +    ++K IDFGL+     G +F  I G+P ++
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFV 184

Query: 252 APEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE++     G E D+WS GVI YILL G  PF  +T++     +     +FE + +   
Sbjct: 185 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT 244

Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFK 370
           S  AK+ ++ +L  +P  R+T+++ L++PWIK  +            SR      M KFK
Sbjct: 245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ-------ALSRKASAVNMEKFK 297

Query: 371 KKVLRVVADNLPQDQMAQIKQMFYMMDTDKN 401
           K   R  ++N        +  +F     + +
Sbjct: 298 KFAARKKSNNG---SGGGLNDIFEAQKIEWH 325

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  462 bits (1191), Expect = e-162
 Identities = 107/282 (37%), Positives = 157/282 (55%), Gaps = 4/282 (1%)

Query: 77  GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMR 136
               D Y   +ELG+G F +  +C    TG  +A K I  +KL    D   + RE  I R
Sbjct: 2   TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICR 60

Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
            L +HPNIV   ++ +++   YLV +L  GGELF+ IV +  Y+E  A+   + IL  + 
Sbjct: 61  KL-QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 119

Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH NG++HR+LKPEN L A  ++ + +K  DFGL+I     E +    G+P Y++PEVL
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 179

Query: 257 RRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
           +++ Y   +D+W+ GVI+YILL G PPFW E +  +   I  G  D+    W  V+ EAK
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 239

Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDNH-APNVSLGGNV 356
            L+ +ML  NP  R+T ++ L+ PWI N    A  +     V
Sbjct: 240 SLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTV 281

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  462 bits (1190), Expect = e-162
 Identities = 121/276 (43%), Positives = 165/276 (59%), Gaps = 4/276 (1%)

Query: 77  GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMR 136
           G+I   YT    +GRG +G      +  T    A KKI K  ++   D+D  ++E+EIM+
Sbjct: 5   GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQEIEIMK 61

Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
            L  HPNI+   E +ED   IYLVMELC GGELF+R+V+K  + E  AA + K +L  V 
Sbjct: 62  SL-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVA 120

Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
            CH+  V HRDLKPENFLF   S +S LK IDFGL+  FKPG+     VG+PYY++P+VL
Sbjct: 121 YCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL 180

Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
              YGPE D WSAGV++Y+LLCG PPF A T+  +   I  G   F    W  VS +A+ 
Sbjct: 181 EGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAES 240

Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSL 352
           L++ +L  +P  R+T  + LE+ W +    +   +L
Sbjct: 241 LIRRLLTKSPKQRITSLQALEHEWFEKQLSSSPRNL 276

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  461 bits (1189), Expect = e-161
 Identities = 107/270 (39%), Positives = 159/270 (58%), Gaps = 2/270 (0%)

Query: 76  EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           +G   ++Y     LG+G FG   +C +  T + YA K I K   K + D   + REVE++
Sbjct: 17  QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-DTSTILREVELL 75

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
           + L  HPNI+   E  ED  + Y+V EL  GGELFD I+ +  ++E  AA + K +   +
Sbjct: 76  KKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGI 134

Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
              H++ ++HRDLKPEN L     ++  +K IDFGLS  F+   +  + +G+ YY+APEV
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEV 194

Query: 256 LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
           LR  Y  + DVWSAGVI+YILL G PPF+ + E  I   +  GK  F+   W  +S +AK
Sbjct: 195 LRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAK 254

Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
           +L++ ML  +P  R+T  + LE+PWI+  +
Sbjct: 255 DLIRKMLTFHPSLRITATQCLEHPWIQKYS 284

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  463 bits (1193), Expect = e-160
 Identities = 109/393 (27%), Positives = 171/393 (43%), Gaps = 26/393 (6%)

Query: 24  IDNTASTNNKRNDASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSN--PAEGNILD 81
           + N+   +      +   P   P        A         F    V S     +  I+D
Sbjct: 2   LSNSQGQSPPVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKKNAIID 61

Query: 82  KY-TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
            Y    + LG G  G   Q F   T E +A K +              RREVE+     +
Sbjct: 62  DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP--------KARREVELHWRASQ 113

Query: 141 HPNIVTYKEAYED----KDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTILRI 194
            P+IV   + YE+    +  + +VME  +GGELF RI ++G   +TER A+ + K+I   
Sbjct: 114 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 173

Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           ++  H   + HRD+KPEN L+     N+ LK  DFG +              +PYY+APE
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE 233

Query: 255 VL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDPWPK 309
           VL    Y    D+WS GVI+YILLCG PPF++        G+   I  G+ +F    W +
Sbjct: 234 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 293

Query: 310 VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKF 369
           VS+E K L++N+L   P  R+T+ E + +PWI      P   L  +   +  +    +  
Sbjct: 294 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVK 353

Query: 370 KKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNG 402
           ++    +    +  +Q+    ++  + D     
Sbjct: 354 EEMTSALATMRVDYEQI----KIKKIEDASNPL 382

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  460 bits (1185), Expect = e-160
 Identities = 85/325 (26%), Positives = 151/325 (46%), Gaps = 7/325 (2%)

Query: 54  HASNVDKKSISFQLRSVVSNPAEGNILDKYTF-GKELGRGEFGITHQCFEIETGETYACK 112
           H  +     +     ++     E N  + Y    KELGRG+F +  QC    TG+ YA K
Sbjct: 2   HHHHHHSSGVDLGTENLYFQSME-NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAK 60

Query: 113 KIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDR 172
            + K +   +    ++  E+ ++      P ++   E YE+   I L++E   GGE+F  
Sbjct: 61  FLKKRRRGQD-CRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSL 119

Query: 173 IVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG 230
            + +     +E     + K IL  V   H+N ++H DLKP+N L +       +K +DFG
Sbjct: 120 CLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFG 179

Query: 231 LSIFFKPGEQFCEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEE 289
           +S       +  EI+G+P Y+APE+L  +      D+W+ G+I Y+LL    PF  E  +
Sbjct: 180 MSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ 239

Query: 290 GIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
                I +  +D+  + +  VS+ A + ++++L  NP  R T E  L + W++  +    
Sbjct: 240 ETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENL 299

Query: 350 VS-LGGNVTSRIKQFSIMNKFKKKV 373
                 + +S+ +  S+ +   K  
Sbjct: 300 FHPEETSSSSQTQDHSVRSSEDKTS 324

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  460 bits (1186), Expect = e-160
 Identities = 106/317 (33%), Positives = 157/317 (49%), Gaps = 19/317 (5%)

Query: 77  GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMR 136
               D Y   +++G G + +  +C    T   +A K I K K        D   E+EI+ 
Sbjct: 18  IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------DPTEEIEILL 70

Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
              +HPNI+T K+ Y+D   +Y+V EL +GGEL D+I+ +  ++ER A+AV  TI + V+
Sbjct: 71  RYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVE 130

Query: 197 VCHENGVMHRDLKPENFLFADGSEN-SQLKAIDFGLSIFFKPGEQFC-EIVGSPYYMAPE 254
             H  GV+HRDLKP N L+ D S N   ++  DFG +   +           +  ++APE
Sbjct: 131 YLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPE 190

Query: 255 VLRRN-YGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRGKIDFERDPWPKV 310
           VL R  Y    D+WS GV++Y +L G  PF     +T E I   I  GK       W  V
Sbjct: 191 VLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSV 250

Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQ------FS 364
           S  AK+LV  ML  +P+ RLT   VL +PWI + +  P   L       + +      +S
Sbjct: 251 SDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGAMAATYS 310

Query: 365 IMNKFKKKVLRVVADNL 381
            +N+ +  VL  V  + 
Sbjct: 311 ALNRNQSPVLEPVGRST 327

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  459 bits (1183), Expect = e-159
 Identities = 108/347 (31%), Positives = 174/347 (50%), Gaps = 10/347 (2%)

Query: 76  EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREV 132
           +  + D Y  G+ELG G+F I  +C E  TG  YA K I K + +     +  +++ REV
Sbjct: 7   QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREV 66

Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
            I+R +  HPNI+T  + YE++  + L++EL  GGELFD +  K   +E  A +  K IL
Sbjct: 67  SILRQV-LHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125

Query: 193 RIVKVCHENGVMHRDLKPENFLFAD-GSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
             V   H   + H DLKPEN +  D       +K IDFGL+   + G +F  I G+P ++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185

Query: 252 APEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE++     G E D+WS GVI YILL G  PF  +T++     I     DF+ + + + 
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQT 245

Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTS--RIKQFSIMNK 368
           S+ AK+ ++ +L      RLT++E L +PWI   +    +    +V +    K+  +  +
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNLENFKKQYVRRR 305

Query: 369 FKKKVLRVVADN-LPQDQMAQIK-QMFYMMDTDKNGDLTFEELKDGL 413
           +K     V   N L +  M ++  +    +   ++        +  L
Sbjct: 306 WKLSFSIVSLCNHLTRSLMKKVHLRTSEDLRNCESDTEENIARRKAL 352

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  458 bits (1181), Expect = e-159
 Identities = 103/353 (29%), Positives = 169/353 (47%), Gaps = 26/353 (7%)

Query: 13  FFSKKSQAIGNIDNTASTN--NKRNDASSKKPSPSPKHESVSKHASNVDKKSISFQ---- 66
           F  ++ +A   I +  + N   +R    S +  PS     +++     D +    +    
Sbjct: 15  FNKERRRARREIRHLPNLNREQRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGTENLYF 74

Query: 67  -----LRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT 121
                   +    A      KY     +GRG   +  +C    TG  +A K +     + 
Sbjct: 75  QSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERL 134

Query: 122 -----EIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK 176
                E   +  RRE  I+R +  HP+I+T  ++YE    ++LV +L   GELFD +  K
Sbjct: 135 SPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK 194

Query: 177 GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK 236
              +E+   ++ +++L  V   H N ++HRDLKPEN L  D   N Q++  DFG S   +
Sbjct: 195 VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDD---NMQIRLSDFGFSCHLE 251

Query: 237 PGEQFCEIVGSPYYMAPEVLR-------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEE 289
           PGE+  E+ G+P Y+APE+L+         YG E+D+W+ GVI++ LL G PPFW   + 
Sbjct: 252 PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI 311

Query: 290 GIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            +   I+ G+  F    W   S   K+L+  +L  +P  RLT E+ L++P+ +
Sbjct: 312 LMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  456 bits (1176), Expect = e-159
 Identities = 102/325 (31%), Positives = 163/325 (50%), Gaps = 28/325 (8%)

Query: 76  EGNILDKYTFG---KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
           +      Y      K LG G F I  +C   ++ + +A K I+K          + ++E+
Sbjct: 3   DSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRME------ANTQKEI 56

Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
             ++    HPNIV   E + D+   +LVMEL  GGELF+RI  K H++E  A+ + + ++
Sbjct: 57  TALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLV 116

Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP-GEQFCEIVGSPYYM 251
             V   H+ GV+HRDLKPEN LF D ++N ++K IDFG +    P  +       + +Y 
Sbjct: 117 SAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYA 176

Query: 252 APEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETE-------EGIAHAIIRGKIDFE 303
           APE+L +N Y    D+WS GVI+Y +L G  PF +            I   I +G   FE
Sbjct: 177 APELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFE 236

Query: 304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSL---------GG 354
            + W  VS+EAK+L++ +L  +P  RL +  +  N W+++ +   +  L         G 
Sbjct: 237 GEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPLMTPDILGSSGA 296

Query: 355 NVTSRIK-QFSIMNKFKKKVLRVVA 378
            V + +K  F   NK+K++   +  
Sbjct: 297 AVHTCVKATFHAFNKYKREGFCLQN 321

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  455 bits (1172), Expect = e-158
 Identities = 88/317 (27%), Positives = 156/317 (49%), Gaps = 12/317 (3%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            + +KY   ++LGRGEFGI H+C E  + +TY  K +  +      D   V++E+ I+  
Sbjct: 2   ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNI 57

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVK 196
             +H NI+   E++E  + + ++ E   G ++F+RI        ER   +    +   ++
Sbjct: 58  A-RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQ 116

Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
             H + + H D++PEN ++     +S +K I+FG +   KPG+ F  +  +P Y APEV 
Sbjct: 117 FLHSHNIGHFDIRPENIIYQT-RRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVH 175

Query: 257 RRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
           + +      D+WS G ++Y+LL G+ PF AET + I   I+  +  F+ + + ++S EA 
Sbjct: 176 QHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM 235

Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLR 375
           + V  +L     +R+T  E L++PW+K      +      V   +K     +   KK L 
Sbjct: 236 DFVDRLLVKERKSRMTASEALQHPWLKQKIERVST----KVIRTLKHRRYYHTLIKKDLN 291

Query: 376 VVADNLPQDQMAQIKQM 392
           +V           I+  
Sbjct: 292 MVVSAARISCGGAIRSQ 308

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  454 bits (1170), Expect = e-158
 Identities = 102/312 (32%), Positives = 163/312 (52%), Gaps = 8/312 (2%)

Query: 76  EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREV 132
           +  + D Y  G+ELG G+F I  +C E  TG  YA K I K + +     +  +++ REV
Sbjct: 7   QQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV 66

Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
            I+R +  H N++T  + YE++  + L++EL  GGELFD +  K   +E  A +  K IL
Sbjct: 67  SILRQV-LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125

Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSEN-SQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
             V   H   + H DLKPEN +  D +     +K IDFGL+   + G +F  I G+P ++
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFV 185

Query: 252 APEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE++     G E D+WS GVI YILL G  PF  +T++     I     DF+ + +   
Sbjct: 186 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT 245

Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTS--RIKQFSIMNK 368
           S+ AK+ ++ +L      RLT++E L +PWI   ++   +    +V +    ++  +  +
Sbjct: 246 SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENFRKQYVRRR 305

Query: 369 FKKKVLRVVADN 380
           +K     V   N
Sbjct: 306 WKLSFSIVSLCN 317

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  447 bits (1151), Expect = e-156
 Identities = 97/272 (35%), Positives = 151/272 (55%), Gaps = 8/272 (2%)

Query: 76  EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           +G I D + F ++LG G FG  H   E  +G     K I K++ +  + ++ +  E+E++
Sbjct: 17  QGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ--VPMEQIEAEIEVL 74

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK----GHYTERAAAAVGKTI 191
           + L  HPNI+   E +ED   +Y+VME CEGGEL +RIV+        +E   A + K +
Sbjct: 75  KSL-DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM 133

Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +  +   H   V+H+DLKPEN LF D S +S +K IDFGL+  FK  E      G+  YM
Sbjct: 134 MNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYM 193

Query: 252 APEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
           APEV +R+   + D+WSAGV++Y LL G  PF   + E +       + ++  +  P ++
Sbjct: 194 APEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LT 252

Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
            +A +L+K ML  +P  R +  +VL + W K 
Sbjct: 253 PQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  444 bits (1144), Expect = e-155
 Identities = 102/276 (36%), Positives = 154/276 (55%), Gaps = 6/276 (2%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
            + D Y  G+ELG G+F I  +C +  TG+ YA K I K +L +    +  +++ REV I
Sbjct: 2   MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61

Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           +R + +HPNI+T  + +E+K  + L++EL  GGELFD +  K   TE  A    K IL  
Sbjct: 62  LREI-RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG 120

Query: 195 VKVCHENGVMHRDLKPENFLFAD-GSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
           V   H   + H DLKPEN +  D    N ++K IDFG++   + G +F  I G+P ++AP
Sbjct: 121 VHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAP 180

Query: 254 EVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK 312
           E++     G E D+WS GVI YILL G  PF  ET++     I     DF+ + +   S+
Sbjct: 181 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSE 240

Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
            AK+ ++ +L  +P  R+T+ + LE+ WIK      
Sbjct: 241 LAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRRN 276

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  453 bits (1166), Expect = e-154
 Identities = 100/430 (23%), Positives = 177/430 (41%), Gaps = 18/430 (4%)

Query: 15  SKKSQAIGNIDNTASTNNKRNDASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNP 74
           SK  +    +        +R      +     + +       +     I  Q        
Sbjct: 91  SKPCEPTAPVLIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEI 150

Query: 75  AEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI 134
              ++LD Y   +ELG G FG+ H+  E  TG  +A K +         D + VR+E++ 
Sbjct: 151 KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES---DKETVRKEIQT 207

Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILR 193
           M  L +HP +V   +A+ED + + ++ E   GGELF+++ ++    +E  A    + + +
Sbjct: 208 MSVL-RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCK 266

Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
            +   HEN  +H DLKPEN +F     N  LK IDFGL+    P +      G+  + AP
Sbjct: 267 GLCHMHENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAP 325

Query: 254 EVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK 312
           EV   +  G   D+WS GV+ YILL G+ PF  E ++     +     + +   +  +S+
Sbjct: 326 EVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE 385

Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKK 372
           + K+ ++ +L  +P  R+T+ + LE+PW+   N     S     +SR  +     K K  
Sbjct: 386 DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQI--PSSRYTKIRDSIKTKYD 443

Query: 373 VLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAA 432
                    P  +++    +      + +    F +  +       K    +V       
Sbjct: 444 --AWPEPLPPLGRISNYSSLRKHRPQEYSIRDAFWDRSEAQPRFIVKPYGTEVGE----- 496

Query: 433 DVDGNGLLSC 442
               +    C
Sbjct: 497 --GQSANFYC 504

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  442 bits (1140), Expect = e-154
 Identities = 92/294 (31%), Positives = 141/294 (47%), Gaps = 16/294 (5%)

Query: 69  SVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDID-- 126
           ++  + +     + Y   + LGRG   +  +C    T + YA K I      +    +  
Sbjct: 5   ALPGSHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ 64

Query: 127 ----DVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTER 182
                  +EV+I+R +  HPNI+  K+ YE     +LV +L + GELFD +  K   +E+
Sbjct: 65  ELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEK 124

Query: 183 AAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC 242
               + + +L ++   H+  ++HRDLKPEN L  D   +  +K  DFG S    PGE+  
Sbjct: 125 ETRKIMRALLEVICALHKLNIVHRDLKPENILLDD---DMNIKLTDFGFSCQLDPGEKLR 181

Query: 243 EIVGSPYYMAPEVLR-------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAI 295
           E+ G+P Y+APE++          YG E+D+WS GVI+Y LL G PPFW   +  +   I
Sbjct: 182 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMI 241

Query: 296 IRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           + G   F    W   S   K+LV   L   P  R T EE L +P+ +       
Sbjct: 242 MSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEEV 295

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  435 bits (1120), Expect = e-150
 Identities = 103/322 (31%), Positives = 159/322 (49%), Gaps = 19/322 (5%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL-----KTEIDIDDVRREV 132
            + D+Y   K LG G  G     FE +T +  A K I+K K      +      +V  E+
Sbjct: 7   ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEI 66

Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
           EI++ L  HP I+  K  ++ +D  Y+V+EL EGGELFD++V      E         +L
Sbjct: 67  EILKKL-NHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124

Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
             V+  HENG++HRDLKPEN L +   E+  +K  DFG S           + G+P Y+A
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184

Query: 253 PEVL----RRNYGPEIDVWSAGVIIYILLCGVPPFWAE-TEEGIAHAIIRGKIDFERDPW 307
           PEVL       Y   +D WS GVI++I L G PPF    T+  +   I  GK +F  + W
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244

Query: 308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMN 367
            +VS++A +LVK +L  +P  R T EE L +PW+++++              + + +   
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQ------DLLSEENEST 298

Query: 368 KFKKKVLRVVADNL-PQDQMAQ 388
              + + +       P++  A+
Sbjct: 299 ALPQVLAQPSTSRKRPREGEAE 320

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  436 bits (1124), Expect = e-150
 Identities = 105/390 (26%), Positives = 175/390 (44%), Gaps = 17/390 (4%)

Query: 37  ASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGI 96
               K         ++ +    +     +  + V     +G++ D Y   +ELG G FG+
Sbjct: 9   HHGSKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVK--QGSVYDYYDILEELGSGAFGV 66

Query: 97  THQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA 156
            H+C E  TG  +  K I         D   V+ E+ IM  L  HP ++   +A+EDK  
Sbjct: 67  VHRCVEKATGRVFVAKFINTPYPL---DKYTVKNEISIMNQL-HHPKLINLHDAFEDKYE 122

Query: 157 IYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLF 215
           + L++E   GGELFDRI  + +  +E       +     +K  HE+ ++H D+KPEN + 
Sbjct: 123 MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMC 182

Query: 216 ADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIY 274
               + S +K IDFGL+    P E       +  + APE++ R   G   D+W+ GV+ Y
Sbjct: 183 ET-KKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGY 241

Query: 275 ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEE 334
           +LL G+ PF  E +      + R   +F+ D +  VS EAK+ +KN+L   P  RLT+ +
Sbjct: 242 VLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHD 301

Query: 335 VLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFY 394
            LE+PW+K D+      +  +  ++I+Q     K K+K     A      ++A    +  
Sbjct: 302 ALEHPWLKGDHSNLTSRIPSSRYNKIRQ-----KIKEKYADWPAPQPAIGRIANFSSLRK 356

Query: 395 MMDTDKN---GDLTFEELKDGLNMIGQKVS 421
               +          +E      +    +S
Sbjct: 357 HRPQEYQIYDSYFDRKEAVPRFKLRPSLIS 386

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  433 bits (1115), Expect = e-150
 Identities = 94/311 (30%), Positives = 138/311 (44%), Gaps = 35/311 (11%)

Query: 72  SNPAEGNILDKYTFGKE-LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRR 130
           ++   G   D Y   ++ LG G       C  + T + YA K I K+          V R
Sbjct: 3   TDSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGH---IRSRVFR 59

Query: 131 EVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKT 190
           EVE++     H N++   E +E++D  YLV E   GG +   I  + H+ E  A+ V + 
Sbjct: 60  EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQD 119

Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI------ 244
           +   +   H  G+ HRDLKPEN L    ++ S +K  DF L    K       I      
Sbjct: 120 VASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELL 179

Query: 245 --VGSPYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPFWAE---------- 286
              GS  YMAPEV+         Y    D+WS GVI+YILL G PPF             
Sbjct: 180 TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRG 239

Query: 287 -----TEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
                 +  +  +I  GK +F    W  +S  AK+L+  +L  +   RL+  +VL++PW+
Sbjct: 240 EACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299

Query: 342 KNDNHAPNVSL 352
           +    AP  +L
Sbjct: 300 QGC--APENTL 308

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  432 bits (1114), Expect = e-149
 Identities = 106/348 (30%), Positives = 165/348 (47%), Gaps = 27/348 (7%)

Query: 53  KHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKE-LGRGEFGITHQCFEIETGETYAC 111
            H  +     +    +     P +  + D Y   K+ LG G  G   +CF   TG+  A 
Sbjct: 2   AHHHHHHSSGLEVLFQGP--EPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCAL 59

Query: 112 KKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED----KDAIYLVMELCEGG 167
           K +              R+EV+        P+IV   + YE+    K  + ++ME  EGG
Sbjct: 60  KLLYDSP--------KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGG 111

Query: 168 ELFDRIVNKGH--YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLK 225
           ELF RI  +G   +TER AA + + I   ++  H + + HRD+KPEN L+    +++ LK
Sbjct: 112 ELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLK 171

Query: 226 AIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFW 284
             DFG +              +PYY+APEVL    Y    D+WS GVI+YILLCG PPF+
Sbjct: 172 LTDFGFAKETTQNA-LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFY 230

Query: 285 AETE----EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
           + T      G+   I  G+  F    W +VS++AK+L++ +L  +P  RLT+ + + +PW
Sbjct: 231 SNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPW 290

Query: 341 IKNDNHAPNVSLG-GNVTSRIKQFSIMNKFKKKVLRVVADN-LPQDQM 386
           I      P   L    V    K     ++ K+++   +A   +  DQ+
Sbjct: 291 INQSMVVPQTPLHTARVLQEDKDH--WDEVKEEMTSALATMRVDYDQV 336

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  420 bits (1082), Expect = e-144
 Identities = 109/356 (30%), Positives = 177/356 (49%), Gaps = 22/356 (6%)

Query: 26  NTASTNNKRNDASSK---KPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDK 82
           ++ S +N+  +  S          K +  S  A ++      F  R V +    G +   
Sbjct: 31  DSRSGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPAPPAPFDHRIVTAKQ--GAVNSF 88

Query: 83  YTFGK--ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           YT  K   LG G FG  H+C E  TG   A K I    +K   D ++V+ E+ +M  L  
Sbjct: 89  YTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMK---DKEEVKNEISVMNQL-D 144

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCH 199
           H N++   +A+E K+ I LVME  +GGELFDRI+++ +  TE       K I   ++  H
Sbjct: 145 HANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH 204

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRN 259
           +  ++H DLKPEN L  +  +  Q+K IDFGL+  +KP E+     G+P ++APEV+  +
Sbjct: 205 QMYILHLDLKPENILCVN-RDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYD 263

Query: 260 -YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
                 D+WS GVI Y+LL G+ PF  + +    + I+  + D E + +  +S+EAKE +
Sbjct: 264 FVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFI 323

Query: 319 KNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMN--KFKKK 372
             +L      R++  E L++PW+ +      +S      ++ K+    +   F  K
Sbjct: 324 SKLLIKEKSWRISASEALKHPWLSDHKLHSRLS------AQKKKNRGSDAQDFVTK 373

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  410 bits (1057), Expect = e-141
 Identities = 96/323 (29%), Positives = 146/323 (45%), Gaps = 39/323 (12%)

Query: 66  QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI 125
            ++S +       I D     + LG G  G   Q F   T E +A K +           
Sbjct: 3   HVKSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP------- 55

Query: 126 DDVRREVEIMRHLPKHPNIVTYKEAYED----KDAIYLVMELCEGGELFDRIVNKGH--Y 179
              RREVE+     + P+IV   + YE+    +  + +VME  +GGELF RI ++G   +
Sbjct: 56  -KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAF 114

Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           TER A+ + K+I   ++  H   + HRD+KPEN L+     N+ LK  DFG         
Sbjct: 115 TEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-------- 166

Query: 240 QFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAI 295
                       A E     Y    D+WS GVI+YILLCG PPF++        G+   I
Sbjct: 167 ------------AKETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 214

Query: 296 IRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGN 355
             G+ +F    W +VS+E K L++N+L   P  R+T+ E + +PWI      P   L  +
Sbjct: 215 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 274

Query: 356 VTSRIKQFSIMNKFKKKVLRVVA 378
              +  +       K+++   +A
Sbjct: 275 RVLKEDKER-WEDVKEEMTSALA 296

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  412 bits (1061), Expect = e-140
 Identities = 101/303 (33%), Positives = 154/303 (50%), Gaps = 15/303 (4%)

Query: 56  SNVDKKSISFQLRSVVSNPAE---GNILDKYTFGKELGRGEFGITHQCFEIETGETYACK 112
           +    ++  F    +  +        + D+Y   K LG G  G     FE +T +  A +
Sbjct: 107 ALSLSRNKVFVFFDLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIR 166

Query: 113 KIAKEKL-----KTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGG 167
            I+K K      +      +V  E+EI++ L  HP I+  K  ++ +D  Y+V+EL EGG
Sbjct: 167 IISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFDAED-YYIVLELMEGG 224

Query: 168 ELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI 227
           ELFD++V      E         +L  V+  HENG++HRDLKPEN L +   E+  +K  
Sbjct: 225 ELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT 284

Query: 228 DFGLSIFFKPGEQFCEIVGSPYYMAPEVL----RRNYGPEIDVWSAGVIIYILLCGVPPF 283
           DFG S           + G+P Y+APEVL       Y   +D WS GVI++I L G PPF
Sbjct: 285 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344

Query: 284 WAE-TEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
               T+  +   I  GK +F  + W +VS++A +LVK +L  +P  R T EE L +PW++
Sbjct: 345 SEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404

Query: 343 NDN 345
           +++
Sbjct: 405 DED 407

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  401 bits (1032), Expect = e-137
 Identities = 93/343 (27%), Positives = 151/343 (44%), Gaps = 52/343 (15%)

Query: 57  NVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAK 116
           +      S +        +   +  KY     +G+G +G+     E +T    A K + K
Sbjct: 2   HHHHHHSSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNK 61

Query: 117 EKLK--TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIV 174
            K++     D++ ++ EV +M+ L  HPNI    E YED+  I LVMELC GG L D++ 
Sbjct: 62  NKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLN 120

Query: 175 NKGH----------------------------------------YTERAAAAVGKTILRI 194
                                                         E+  + + + I   
Sbjct: 121 VFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180

Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ-----FCEIVGSPY 249
           +   H  G+ HRD+KPENFLF+  +++ ++K +DFGLS  F               G+PY
Sbjct: 181 LHYLHNQGICHRDIKPENFLFST-NKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPY 239

Query: 250 YMAPEVLR---RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP 306
           ++APEVL     +YGP+ D WSAGV++++LL G  PF    +      ++  K+ FE   
Sbjct: 240 FVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPN 299

Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN 349
           +  +S  A++L+ N+L+ N   R      L++PWI   +    
Sbjct: 300 YNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDKIY 342

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  319 bits (820), Expect = e-104
 Identities = 83/423 (19%), Positives = 160/423 (37%), Gaps = 38/423 (8%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
            +     LG G  G T     +      A K+I  E            REV+++R   +H
Sbjct: 25  SFCPKDVLGHGAEG-TIVYRGMFDNRDVAVKRILPECF------SFADREVQLLRESDEH 77

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHE 200
           PN++ Y    +D+   Y+ +ELC    L + +  K   +       + +     +   H 
Sbjct: 78  PNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS 136

Query: 201 NGVMHRDLKPENFLFADGSENSQLKAI--DFGLSIFFKPGEQ----FCEIVGSPYYMAPE 254
             ++HRDLKP N L +  + + ++KA+  DFGL      G         + G+  ++APE
Sbjct: 137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196

Query: 255 VLR----RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
           +L      N    +D++SAG + Y ++  G  PF    +      +    +D    P   
Sbjct: 197 MLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCL-HPEKH 255

Query: 310 VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKF 369
               A+EL++ M+  +P  R + + VL++P+    +    +    +V+ RI++ S+    
Sbjct: 256 EDVIARELIEKMIAMDPQKRPSAKHVLKHPFFW--SLEKQLQFFQDVSDRIEKESLDGPI 313

Query: 370 KKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVS-----DPD 424
            K++ R     +  D    I       D  K        ++D L  +  K         +
Sbjct: 314 VKQLERGGRAVVKMDWRENITVPL-QTDLRKFRTYKGGSVRDLLRAMRNKKHHYRELPAE 372

Query: 425 VKMLMEAADVDGNGLLS--CDEFVTMSVH----LKRIGNDDILSQAFRFFDKNQSGFIEV 478
           V+  +       +  +      F  +  H    ++   ++ +    +          +  
Sbjct: 373 VRETLGTLP---DDFVCYFTSRFPHLLAHTYRAMELCSHERLFQPYYFHEPPEPQPPVTP 429

Query: 479 DEL 481
           D L
Sbjct: 430 DAL 432

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  304 bits (779), Expect = 9e-98
 Identities = 84/376 (22%), Positives = 141/376 (37%), Gaps = 52/376 (13%)

Query: 76  EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           E ++ +     K LG G  G          G   A K++  +        D    E++++
Sbjct: 10  EQSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFC------DIALMEIKLL 62

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY-------TERAAAAVG 188
                HPN++ Y  +      +Y+ +ELC    L D + +K           E    ++ 
Sbjct: 63  TESDDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLL 121

Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFAD----------GSENSQLKAIDFGLSIFFKPG 238
           + I   V   H   ++HRDLKP+N L +           G+EN ++   DFGL      G
Sbjct: 122 RQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG 181

Query: 239 EQFCE-----IVGSPYYMAPEVLR--------RNYGPEIDVWSAGVIIYILLC-GVPPFW 284
           +           G+  + APE+L         R     ID++S G + Y +L  G  PF 
Sbjct: 182 QSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFG 241

Query: 285 AETEEGIAHAIIRGKIDF---ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
            +        IIRG       +      +  EA +L+  M+D +P  R T  +VL +P  
Sbjct: 242 DKYSR--ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299

Query: 342 KND----NHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMD 397
                       VS    + +R    +++ KF      V+      D   +  + F M +
Sbjct: 300 WPKSKKLEFLLKVSDRLEIENRDPPSALLMKFDAGSDFVIPSG---DWTVKFDKTF-MDN 355

Query: 398 TDKNGDLTFEELKDGL 413
            ++       +L D L
Sbjct: 356 LERYRKYHSSKLMDLL 371

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  283 bits (727), Expect = 2e-91
 Identities = 80/308 (25%), Positives = 142/308 (46%), Gaps = 16/308 (5%)

Query: 42  PSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCF 101
           P+P+   ++     +     + +   + +     +     +Y  G+ LG+G F    +  
Sbjct: 2   PAPADPGKAGVPGVAAPGAPAAAPPAKEIPEVLVDPRSRRRYVRGRFLGKGGFAKCFEIS 61

Query: 102 EIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM 161
           + +T E +A K + K  L      + +  E+ I R L  H ++V +   +ED D +++V+
Sbjct: 62  DADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVL 120

Query: 162 ELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSEN 221
           ELC    L +    +   TE  A    + I+   +  H N V+HRDLK  N      +E+
Sbjct: 121 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NED 177

Query: 222 SQLKAIDFGLSIFFKPGEQF----CEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYIL 276
            ++K  DFGL+   +   +     C   G+P Y+APEVL +  +  E+DVWS G I+Y L
Sbjct: 178 LEVKIGDFGLATKVEYDGERKKVLC---GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 234

Query: 277 LCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVL 336
           L G PPF     +     I +   ++       ++  A  L++ ML  +P  R T+ E+L
Sbjct: 235 LVGKPPFETSCLKETYLRIKKN--EYSIPKH--INPVAASLIQKMLQTDPTARPTINELL 290

Query: 337 ENPWIKND 344
            + +  + 
Sbjct: 291 NDEFFTSG 298

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  278 bits (714), Expect = 5e-90
 Identities = 78/270 (28%), Positives = 130/270 (48%), Gaps = 16/270 (5%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
             +Y  G+ LG+G F    +  + +T E +A K + K  L      + +  E+ I R L 
Sbjct: 14  RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL- 72

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
            H ++V +   +ED D +++V+ELC    L +    +   TE  A    + I+   +  H
Sbjct: 73  AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH 132

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF----CEIVGSPYYMAPEV 255
            N V+HRDLK  N      +E+ ++K  DFGL+   +   +     C   G+P Y+APEV
Sbjct: 133 RNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLC---GTPNYIAPEV 186

Query: 256 LRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           L +  +  E+DVWS G I+Y LL G PPF     +     I +   ++       ++  A
Sbjct: 187 LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKH--INPVA 242

Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKND 344
             L++ ML  +P  R T+ E+L + +  + 
Sbjct: 243 ASLIQKMLQTDPTARPTINELLNDEFFTSG 272

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  278 bits (712), Expect = 2e-89
 Identities = 68/306 (22%), Positives = 116/306 (37%), Gaps = 43/306 (14%)

Query: 76  EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           +      +     LG+G      +    +TG+ +A K          +D+    RE E++
Sbjct: 4   QSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDV--QMREFEVL 61

Query: 136 RHLPKHPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIVNKGH---YTERAAAAVGKT 190
           + L  H NIV      E+       L+ME C  G L+  +    +     E     V + 
Sbjct: 62  KKL-NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRD 120

Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
           ++  +    ENG++HR++KP N +   G    S  K  DFG +   +  EQF  + G+  
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEE 180

Query: 250 YMAPEVLRR---------NYGPEIDVWSAGVIIYILLCGVPPFWA----ETEEGIAHAII 296
           Y+ P++  R          YG  +D+WS GV  Y    G  PF         + + + II
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240

Query: 297 RGK---------------IDFERD--PWPKVSKEAKELVK----NMLDPNPYNRLTLEEV 335
            GK               ID+  D      +S+  + L+     N+L+ +       ++ 
Sbjct: 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQF 300

Query: 336 LENPWI 341
                 
Sbjct: 301 FAETSD 306

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  271 bits (696), Expect = 1e-87
 Identities = 87/280 (31%), Positives = 144/280 (51%), Gaps = 17/280 (6%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++ +  G  LG+G F   ++   I TG   A K I K+ +     +  V+ EV+I   L 
Sbjct: 10  IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL- 68

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY-TERAAAAVGKTILRIVKVC 198
           KHP+I+     +ED + +YLV+E+C  GE+   + N+    +E  A      I+  +   
Sbjct: 69  KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL 128

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF----CEIVGSPYYMAPE 254
           H +G++HRDL   N L    + N  +K  DFGL+   K   +     C   G+P Y++PE
Sbjct: 129 HSHGILHRDLTLSNLLL---TRNMNIKIADFGLATQLKMPHEKHYTLC---GTPNYISPE 182

Query: 255 VLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           +  R+ +G E DVWS G + Y LL G PPF  +T +   + ++    +    P   +S E
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEM---P-SFLSIE 238

Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLG 353
           AK+L+  +L  NP +RL+L  VL++P++  ++   +   G
Sbjct: 239 AKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSKDEG 278

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  271 bits (695), Expect = 4e-87
 Identities = 69/296 (23%), Positives = 120/296 (40%), Gaps = 41/296 (13%)

Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
               +     LG+G FG   +         YA KKI      TE  +  +  EV ++  L
Sbjct: 4   YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASL 59

Query: 139 PKHPNIVTYKEAYEDKDA-------------IYLVMELCEGGELFDRIVNKGHYTERAAA 185
             H  +V Y  A+ ++               +++ ME CE G L+D I ++    +R   
Sbjct: 60  -NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY 118

Query: 186 A-VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI 244
             + + IL  +   H  G++HRDLKP N       E+  +K  DFGL+          ++
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKL 175

Query: 245 ---------------VGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAET 287
                          +G+  Y+A EVL    +Y  +ID++S G+I + ++   P      
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGME 233

Query: 288 EEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
              I   +    I+F  D      K  K++++ ++D +P  R     +L + W+  
Sbjct: 234 RVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV 289

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  271 bits (695), Expect = 7e-87
 Identities = 78/293 (26%), Positives = 126/293 (43%), Gaps = 28/293 (9%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
            Y+  K++G G      Q    E  + YA K +  E+   +  +D  R E+  +  L + 
Sbjct: 29  IYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQ-TLDSYRNEIAYLNKL-QQ 85

Query: 142 PN--IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
            +  I+   +       IY+VME C   +L   +  K         +  K +L  V   H
Sbjct: 86  HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 144

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL 256
           ++G++H DLKP NFL  DG     LK IDFG++   +P          VG+  YM PE +
Sbjct: 145 QHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 200

Query: 257 ------------RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIA-HAIIRGKIDFE 303
                       +    P+ DVWS G I+Y +  G  PF     +    HAII    + E
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 260

Query: 304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNV 356
                   K+ ++++K  L  +P  R+++ E+L +P+++   H  N    G  
Sbjct: 261 --FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTT 311

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  272 bits (696), Expect = 5e-86
 Identities = 73/368 (19%), Positives = 134/368 (36%), Gaps = 47/368 (12%)

Query: 76  EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           +      +     LG+G      +    +TG+ +A K          +D+    RE E++
Sbjct: 4   QSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDV--QMREFEVL 61

Query: 136 RHLPKHPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIVNKGH---YTERAAAAVGKT 190
           + L  H NIV      E+       L+ME C  G L+  +    +     E     V + 
Sbjct: 62  KKL-NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRD 120

Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
           ++  +    ENG++HR++KP N +   G    S  K  DFG +   +  EQF  + G+  
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEE 180

Query: 250 YMAPEVLRRN---------YGPEIDVWSAGVIIYILLCGVPPFWA----ETEEGIAHAII 296
           Y+ P++  R          YG  +D+WS GV  Y    G  PF         + + + II
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240

Query: 297 RGK---------------IDFERD--PWPKVSKEAKELVK----NMLDPNPYNRLTLEEV 335
            GK               ID+  D      +S+  + L+     N+L+ +       ++ 
Sbjct: 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQF 300

Query: 336 LENPWI---KNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQM 392
                    +   H  ++         I  ++    F + V +        +Q    +  
Sbjct: 301 FAETSDILHRMVIHVFSLQQMTAHKIYIHSYNTATIFHELVYKQTKII-SSNQELIYEGR 359

Query: 393 FYMMDTDK 400
             +++  +
Sbjct: 360 RLVLEPGR 367

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  267 bits (686), Expect = 5e-86
 Identities = 88/273 (32%), Positives = 138/273 (50%), Gaps = 16/273 (5%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 8   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 66

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 67  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVL 256
              V+HRD+KPEN L        +LK  DFG S+   P  +    C   G+  Y+ PE++
Sbjct: 127 SKRVIHRDIKPENLLL---GSAGELKIADFGWSV-HAPSSRRTDLC---GTLDYLPPEMI 179

Query: 257 -RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
             R +  ++D+WS GV+ Y  L G PPF A T +     I R +  F   P   V++ A+
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF---P-DFVTEGAR 235

Query: 316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
           +L+  +L  NP  R  L EVLE+PWI  ++  P
Sbjct: 236 DLISRLLKHNPSQRPMLREVLEHPWITANSSKP 268

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  271 bits (694), Expect = 8e-86
 Identities = 85/373 (22%), Positives = 145/373 (38%), Gaps = 39/373 (10%)

Query: 23  NIDNTASTNNKRNDASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDK 82
           +  +++    + +       +   +    S      D    S      +S          
Sbjct: 3   HHHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGR-----I 57

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y+  K++G G      Q    E  + YA K +  E+   +  +D  R E+  +  L +  
Sbjct: 58  YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQ-TLDSYRNEIAYLNKL-QQH 114

Query: 143 N--IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           +  I+   +       IY+VME C   +L   +  K         +  K +L  V   H+
Sbjct: 115 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173

Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL- 256
           +G++H DLKP NFL  DG     LK IDFG++   +P          VG+  YM PE + 
Sbjct: 174 HGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIK 229

Query: 257 -----------RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIA-HAIIRGKIDFER 304
                      +    P+ DVWS G I+Y +  G  PF     +    HAII    + E 
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE- 288

Query: 305 DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGN------VTS 358
                  K+ ++++K  L  +P  R+++ E+L +P+++   H  N    G       V  
Sbjct: 289 -FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLG 347

Query: 359 RIKQFSIMNKFKK 371
           ++   +  N   K
Sbjct: 348 QLVGLNSPNSILK 360

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  267 bits (685), Expect = 9e-86
 Identities = 88/280 (31%), Positives = 147/280 (52%), Gaps = 16/280 (5%)

Query: 69  SVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDV 128
           ++   P     +D +  G+ LG+G+FG  +   E +     A K + K +L+ E     +
Sbjct: 2   ALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQL 61

Query: 129 RREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVG 188
           RRE+EI  HL +HPNI+     + D+  IYL++E    GEL+  +   G + E+ +A   
Sbjct: 62  RREIEIQSHL-RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 120

Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIV 245
           + +   +  CHE  V+HRD+KPEN L        +LK  DFG S+   P  +    C   
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLM---GYKGELKIADFGWSV-HAPSLRRRTMC--- 173

Query: 246 GSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER 304
           G+  Y+ PE++  + +  ++D+W AGV+ Y  L G+PPF + +       I+   + F  
Sbjct: 174 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF-- 231

Query: 305 DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
            P P +S  +K+L+  +L  +P  RL L+ V+E+PW+K +
Sbjct: 232 -P-PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  268 bits (686), Expect = 3e-85
 Identities = 81/314 (25%), Positives = 132/314 (42%), Gaps = 34/314 (10%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
            Y+  K++G G      Q    E  + YA K +  E+   +  +D  R E+  +  L + 
Sbjct: 10  IYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQ-TLDSYRNEIAYLNKL-QQ 66

Query: 142 PN--IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
            +  I+   +       IY+VME C   +L   +  K         +  K +L  V   H
Sbjct: 67  HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH 125

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE---IVGSPYYMAPEVL 256
           ++G++H DLKP NFL  DG     LK IDFG++   +P          VG+  YM PE +
Sbjct: 126 QHGIVHSDLKPANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 181

Query: 257 ------------RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIA-HAIIRGKIDFE 303
                       +    P+ DVWS G I+Y +  G  PF     +    HAII    + E
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 241

Query: 304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGN------VT 357
                   K+ ++++K  L  +P  R+++ E+L +P+++   H  N    G       V 
Sbjct: 242 --FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVL 299

Query: 358 SRIKQFSIMNKFKK 371
            ++   +  N   K
Sbjct: 300 GQLVGLNSPNSILK 313

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  266 bits (682), Expect = 8e-85
 Identities = 103/328 (31%), Positives = 160/328 (48%), Gaps = 17/328 (5%)

Query: 68  RSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD 127
            S+ S   E   +  Y   K +G+G F        I TG   A K I K +L     +  
Sbjct: 2   NSIASCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN-PTSLQK 60

Query: 128 VRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAV 187
           + REV IM+ L  HPNIV   E  E +  +YL+ME   GGE+FD +V  G   E+ A + 
Sbjct: 61  LFREVRIMKIL-NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSK 119

Query: 188 GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS 247
            + I+  V+ CH+  ++HRDLK EN L      +  +K  DFG S  F  G +     G+
Sbjct: 120 FRQIVSAVQYCHQKRIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDAFCGA 176

Query: 248 PYYMAPEVLR-RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD 305
           P Y APE+ + + Y GPE+DVWS GVI+Y L+ G  PF  +  + +   ++RGK  +   
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK--YRIP 234

Query: 306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNV------SLGGNVTSR 359
            +  +S + + L+K  L  NP  R TLE+++++ WI   +    +       L  +   R
Sbjct: 235 FY--MSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQKR 292

Query: 360 IKQFSIMNKFKKKVLRVVADNLPQDQMA 387
           I     M   ++++   ++     +  A
Sbjct: 293 IDIMVGMGYSQEEIQESLSKMKYDEITA 320

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  267 bits (683), Expect = 2e-84
 Identities = 52/349 (14%), Positives = 98/349 (28%), Gaps = 52/349 (14%)

Query: 43  SPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFE 102
            P+   E+V+      +       + S++S         K    + L  G+  +     +
Sbjct: 32  EPAAMVEAVTATVWPQNA---ETTVDSLLSQGER-----KLKLVEPLRVGDRSVVFLVRD 83

Query: 103 IETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL-----------------------P 139
           +E  E +A K        +  +++ +         L                        
Sbjct: 84  VERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQ 143

Query: 140 KHPNIVTYKEAYEDKDA--IYLVMELCEG------GELFDRIVNKGHYTERAAAAVGKTI 191
             P         +D       L+M             L    V +G     A   +   +
Sbjct: 144 SQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQL 203

Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           +R+       G++H    P+N        + +L   D      +K G +         Y 
Sbjct: 204 IRLAANLQSKGLVHGHFTPDNLFI---MPDGRLMLGDVSAL--WKVGTRGPASSVPVTYA 258

Query: 252 APEVLRRN---YGPEIDVWSAGVIIYILLCGVPPFWAETEEG-----IAHAIIRGKIDFE 303
             E L  +   +   ++ W  G+ IY + C   PF   T             + G     
Sbjct: 259 PREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLA 318

Query: 304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSL 352
                 +    K L+   L+ +   RL   E +E P      +  + SL
Sbjct: 319 FGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEISSSL 367

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  264 bits (676), Expect = 6e-84
 Identities = 87/327 (26%), Positives = 145/327 (44%), Gaps = 36/327 (11%)

Query: 28  ASTNNKRNDASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGK 87
            S+++  + +S   P  S        HA+             +     +  +  +Y  G 
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMAPCNDLHAT------------KLAPGKEKEPLESQYQVGP 49

Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIMRHLP-KHPN 143
            LG G FG  +    +      A K + K+++    ++ +   V  EV +++ +      
Sbjct: 50  LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109

Query: 144 IVTYKEAYEDKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
           ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L  V+ CH  G
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 169

Query: 203 VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG--EQFCEIVGSPYYMAPEVLR-RN 259
           V+HRD+K EN L  D     +LK IDFG     K      F    G+  Y  PE +R   
Sbjct: 170 VLHRDIKDENILI-D-LNRGELKLIDFGSGALLKDTVYTDFD---GTRVYSPPEWIRYHR 224

Query: 260 Y-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
           Y G    VWS G+++Y ++CG  PF  + E      IIRG++ F      +VS E + L+
Sbjct: 225 YHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFF---R-QRVSSECQHLI 274

Query: 319 KNMLDPNPYNRLTLEEVLENPWIKNDN 345
           +  L   P +R T EE+  +PW+++  
Sbjct: 275 RWCLALRPSDRPTFEEIQNHPWMQDVL 301

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  259 bits (663), Expect = 1e-82
 Identities = 95/278 (34%), Positives = 137/278 (49%), Gaps = 16/278 (5%)

Query: 72  SNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           S       +  Y  G  LG G FG         TG   A K + ++K+++   +  ++RE
Sbjct: 2   SKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKRE 61

Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
           ++ ++   +HP+I+   +        ++VME   GGELFD I   G   E  A  + + I
Sbjct: 62  IQNLKLF-RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI 120

Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSP 248
           L  V  CH + V+HRDLKPEN L      +   K  DFGLS     GE     C   GSP
Sbjct: 121 LSAVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDGEFLRTSC---GSP 174

Query: 249 YYMAPEVLR-RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP 306
            Y APEV+  R Y GPE+D+WS GVI+Y LLCG  PF  E    +   I  G   F    
Sbjct: 175 NYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG--VFYIPE 232

Query: 307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
           +  +++    L+ +ML  +P  R T++++ E+ W K D
Sbjct: 233 Y--LNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD 268

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  259 bits (663), Expect = 1e-82
 Identities = 75/276 (27%), Positives = 125/276 (45%), Gaps = 22/276 (7%)

Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
            ++ +   + LG G +G         T E  A K +  ++       +++++E+ I + L
Sbjct: 5   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKML 62

Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 63  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ------FCEIVGSPYYMA 252
           H  G+ HRD+KPEN L  D  +N  LK  DFGL+  F+   +       C   G+  Y+A
Sbjct: 122 HGIGITHRDIKPENLLL-DERDN--LKISDFGLATVFRYNNRERLLNKMC---GTLPYVA 175

Query: 253 PEVL-RRNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIA--HAIIRGKIDFERDPWP 308
           PE+L RR +    +DVWS G+++  +L G  P+  +  +                 +PW 
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEK--KTYLNPWK 232

Query: 309 KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
           K+      L+  +L  NP  R+T+ ++ ++ W    
Sbjct: 233 KIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 268

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  259 bits (664), Expect = 5e-82
 Identities = 90/286 (31%), Positives = 138/286 (48%), Gaps = 22/286 (7%)

Query: 74  PAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD-----V 128
             EG    KY+    LG G FG      + E  +    K I KEK+  +  I+D     V
Sbjct: 17  ACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKV 76

Query: 129 RREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMEL-CEGGELFDRIVNKGHYTERAAAAV 187
             E+ I+  + +H NI+   + +E++    LVME    G +LF  I       E  A+ +
Sbjct: 77  TLEIAILSRV-EHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYI 135

Query: 188 GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS 247
            + ++  V       ++HRD+K EN + A   E+  +K IDFG + + + G+ F    G+
Sbjct: 136 FRQLVSAVGYLRLKDIIHRDIKDENIVIA---EDFTIKLIDFGSAAYLERGKLFYTFCGT 192

Query: 248 PYYMAPEVLRRN-Y-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD 305
             Y APEVL  N Y GPE+++WS GV +Y L+    PF  E EE      +   I     
Sbjct: 193 IEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF-CELEE-----TVEAAI---HP 243

Query: 306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVS 351
           P+  VSKE   LV  +L P P  R TLE+++ +PW+    +  + +
Sbjct: 244 PYL-VSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYT 288

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  257 bits (659), Expect = 1e-81
 Identities = 74/309 (23%), Positives = 120/309 (38%), Gaps = 13/309 (4%)

Query: 36  DASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFG 95
           D  ++       H+   +  S   + S + Q      +  E      +     LG G +G
Sbjct: 12  DLGTENLYFQSMHQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYG 71

Query: 96  ITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD 155
              +    E G  YA K+        + D      EV     + +HP  V  ++A+E+  
Sbjct: 72  EVFKVRSKEDGRLYAVKRSMSPFRGPK-DRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG 130

Query: 156 AIYLVMELCEGGELFDRIVNKGHY-TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFL 214
            +YL  ELC G  L       G    E       +  L  +   H  G++H D+KP N  
Sbjct: 131 ILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIF 189

Query: 215 FADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIY 274
                   + K  DFGL +            G P YMAPE+L+ +YG   DV+S G+ I 
Sbjct: 190 L---GPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTIL 246

Query: 275 ILLCGVP-PFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLE 333
            + C +  P   E  + +    +  +          +S E + ++  ML+P+P  R T E
Sbjct: 247 EVACNMELPHGGEGWQQLRQGYLPPEF------TAGLSSELRSVLVMMLEPDPKLRATAE 300

Query: 334 EVLENPWIK 342
            +L  P ++
Sbjct: 301 ALLALPVLR 309

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  257 bits (658), Expect = 2e-81
 Identities = 75/280 (26%), Positives = 120/280 (42%), Gaps = 26/280 (9%)

Query: 76  EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREV 132
                 +Y  G  LG+G FG       +      A K I + ++     + D      EV
Sbjct: 26  REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEV 85

Query: 133 EIMRHL---PKHPNIVTYKEAYEDKDAIYLVMEL-CEGGELFDRIVNKGHYTERAAAAVG 188
            ++  +     HP ++   + +E ++   LV+E      +LFD I  KG   E  +    
Sbjct: 86  ALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFF 145

Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG--EQFCEIVG 246
             ++  ++ CH  GV+HRD+K EN L  D       K IDFG            F    G
Sbjct: 146 GQVVAAIQHCHSRGVVHRDIKDENILI-D-LRRGCAKLIDFGSGALLHDEPYTDFD---G 200

Query: 247 SPYYMAPEVLR-RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER 304
           +  Y  PE +    Y      VWS G+++Y ++CG  PF  + E      I+  ++ F  
Sbjct: 201 TRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHF-- 252

Query: 305 DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
            P   VS +   L++  L P P +R +LEE+L +PW++  
Sbjct: 253 -P-AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTP 290

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  257 bits (659), Expect = 2e-81
 Identities = 75/274 (27%), Positives = 126/274 (45%), Gaps = 18/274 (6%)

Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
            ++ +   + LG G +G         T E  A K +  ++       +++++E+ I + L
Sbjct: 5   FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKML 62

Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   
Sbjct: 63  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ------FCEIVGSPYYMA 252
           H  G+ HRD+KPEN L  D  +N  LK  DFGL+  F+   +       C   G+  Y+A
Sbjct: 122 HGIGITHRDIKPENLLL-DERDN--LKISDFGLATVFRYNNRERLLNKMC---GTLPYVA 175

Query: 253 PEVL-RRNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           PE+L RR +    +DVWS G+++  +L G  P+  +  +         +     +PW K+
Sbjct: 176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPW-DQPSDSCQEYSDWKEKKTYLNPWKKI 234

Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
                 L+  +L  NP  R+T+ ++ ++ W    
Sbjct: 235 DSAPLALLHKILVENPSARITIPDIKKDRWYNKP 268

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  258 bits (660), Expect = 5e-81
 Identities = 94/271 (34%), Positives = 133/271 (49%), Gaps = 14/271 (5%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
            D+Y F K++G G FG+     +  T E  A K I +     E    +V+RE+   R L 
Sbjct: 19  SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDE----NVQREIINHRSL- 73

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNIV +KE       + ++ME   GGEL++RI N G ++E  A    + +L  V  CH
Sbjct: 74  RHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCH 133

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL-RR 258
              + HRDLK EN L  DGS   +LK  DFG S       Q    VG+P Y+APEVL R+
Sbjct: 134 SMQICHRDLKLENTLL-DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQ 192

Query: 259 NY-GPEIDVWSAGVIIYILLCGVPPFWAETEEG----IAHAIIRGKIDFERDPWPKVSKE 313
            Y G   DVWS GV +Y++L G  PF    E          I+  K     D    +S E
Sbjct: 193 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIR--ISPE 250

Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
              L+  +   +P  R+++ E+  + W   +
Sbjct: 251 CCHLISRIFVADPATRISIPEIKTHSWFLKN 281

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  253 bits (649), Expect = 3e-80
 Identities = 82/301 (27%), Positives = 145/301 (48%), Gaps = 37/301 (12%)

Query: 72  SNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL------------ 119
            +  +   L++YT   E+G+G +G+    +       YA K ++K+KL            
Sbjct: 4   GSSGDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPP 63

Query: 120 -----------KTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED--KDAIYLVMELCEG 166
                      +    I+ V +E+ I++ L  HPN+V   E  +D  +D +Y+V EL   
Sbjct: 64  RGTRPAPGGCIQPRGPIEQVYQEIAILKKL-DHPNVVKLVEVLDDPNEDHLYMVFELVNQ 122

Query: 167 GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKA 226
           G + + +      +E  A    + +++ ++  H   ++HRD+KP N L     E+  +K 
Sbjct: 123 GPVME-VPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV---GEDGHIKI 178

Query: 227 IDFGLSIFFKPGEQFCE-IVGSPYYMAPEVL---RRNY-GPEIDVWSAGVIIYILLCGVP 281
            DFG+S  FK  +      VG+P +MAPE L   R+ + G  +DVW+ GV +Y  + G  
Sbjct: 179 ADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQC 238

Query: 282 PFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
           PF  E    +   I    ++F     P ++++ K+L+  MLD NP +R+ + E+  +PW+
Sbjct: 239 PFMDERIMCLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296

Query: 342 K 342
            
Sbjct: 297 T 297

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  265 bits (677), Expect = 3e-80
 Identities = 74/311 (23%), Positives = 124/311 (39%), Gaps = 33/311 (10%)

Query: 72  SNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           S          +   + LG G FG   +    +TGE  A K+  +E      + +    E
Sbjct: 5   SPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK--NRERWCLE 62

Query: 132 VEIMRHLPKHPNIVTYKEAYEDK------DAIYLVMELCEGGELFDRIVNKGH---YTER 182
           ++IM+ L  HPN+V+ +E  +        D   L ME CEGG+L   +    +     E 
Sbjct: 63  IQIMKKL-NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEG 121

Query: 183 AAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC 242
               +   I   ++  HEN ++HRDLKPEN +   G +    K ID G +     GE   
Sbjct: 122 PIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT 181

Query: 243 EIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID 301
           E VG+  Y+APE+L  + Y   +D WS G + +  + G  PF    +    H  +R K +
Sbjct: 182 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSN 241

Query: 302 FERDPWPKVS--------------------KEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
                +  ++                     + +  ++ ML  +   R T  +       
Sbjct: 242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCF 301

Query: 342 KNDNHAPNVSL 352
           +  +   ++ L
Sbjct: 302 QALDSILSLKL 312

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  256 bits (655), Expect = 3e-80
 Identities = 55/383 (14%), Positives = 116/383 (30%), Gaps = 68/383 (17%)

Query: 5   ISLARKGAFFSKKSQAIGNIDNTASTNNKRNDASSKKPSPSPKHESVSKHASNVDKKSIS 64
            S  R+  +F      +  I+   +   + N  ++ +   S     VS    N  +    
Sbjct: 7   HSSGRENLYFQGPGDVV--IEELFNRIPQANVRTTSEYMQSAADSLVSTSLWNTGQ---P 61

Query: 65  FQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID 124
           F++ S +              G  LG+ +     +  + ETGE++        +      
Sbjct: 62  FRVESELGERPR-----TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNA 116

Query: 125 IDDVRREVEIMRHL------------------------PKHPNIVTYKEAYEDKDA--IY 158
           I  ++ EV  +R L                        P+   ++  +    D      +
Sbjct: 117 IKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRF 176

Query: 159 LVMELCE------GGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPEN 212
            +    +      G  L             A   +   ++R++   H  G++H  L+P +
Sbjct: 177 FLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVD 236

Query: 213 FLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRN------------Y 260
            +     +   +    F   +             S  +  PE+  R              
Sbjct: 237 IVL---DQRGGVFLTGFEHLVRDGARVVSS---VSRGFEPPELEARRATISYHRDRRTLM 290

Query: 261 GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKN 320
               D W+ G++IY + C   P   +   G +  I R   +        + +  + L++ 
Sbjct: 291 TFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSCKN--------IPQPVRALLEG 342

Query: 321 MLDPNPYNRLTLEEVLENPWIKN 343
            L     +RL   + +E P  + 
Sbjct: 343 FLRYPKEDRLLPLQAMETPEYEQ 365

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  251 bits (642), Expect = 2e-79
 Identities = 87/280 (31%), Positives = 133/280 (47%), Gaps = 25/280 (8%)

Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
             + Y     +G G +G   +      G+    K++    +    +   +  EV ++R L
Sbjct: 4   RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEA-EKQMLVSEVNLLREL 62

Query: 139 PKHPNIVTYKEAYEDKDA--IYLVMELCEGGELFDRIV----NKGHYTERAAAAVGKTIL 192
            KHPNIV Y +   D+    +Y+VME CEGG+L   I      + +  E     V   + 
Sbjct: 63  -KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLT 121

Query: 193 RIVKVCHE-----NGVMHRDLKPEN-FLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IV 245
             +K CH      + V+HRDLKP N FL         +K  DFGL+        F +  V
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFL----DGKQNVKLGDFGLARILNHDTSFAKTFV 177

Query: 246 GSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER 304
           G+PYYM+PE +   +Y  + D+WS G ++Y L   +PPF A +++ +A  I  GK     
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF---- 233

Query: 305 DPWPKV-SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
              P   S E  E++  ML+   Y+R ++EE+LENP I  
Sbjct: 234 RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  251 bits (642), Expect = 1e-78
 Identities = 78/278 (28%), Positives = 137/278 (49%), Gaps = 16/278 (5%)

Query: 72  SNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           +       ++KY   +++G G FG        E G  Y  K+I   ++ +  + ++ RRE
Sbjct: 15  TENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRRE 73

Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI--VNKGHYTERAAAAVGK 189
           V ++ ++ KHPNIV Y+E++E+  ++Y+VM+ CEGG+LF RI       + E        
Sbjct: 74  VAVLANM-KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV 132

Query: 190 TILRIVKVCHENGVMHRDLKPEN-FLFADGSENSQLKAIDFGLSIFFKPGEQFCE-IVGS 247
            I   +K  H+  ++HRD+K +N FL  DG     ++  DFG++       +     +G+
Sbjct: 133 QICLALKHVHDRKILHRDIKSQNIFLTKDG----TVQLGDFGIARVLNSTVELARACIGT 188

Query: 248 PYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP 306
           PYY++PE+     Y  + D+W+ G ++Y L      F A + + +   II G       P
Sbjct: 189 PYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF----PP 244

Query: 307 WP-KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                S + + LV  +   NP +R ++  +LE  +I  
Sbjct: 245 VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAK 282

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  253 bits (649), Expect = 4e-78
 Identities = 97/270 (35%), Positives = 140/270 (51%), Gaps = 16/270 (5%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           +  Y  G  LG G FG         TG   A K + ++K+++   +  +RRE++ ++   
Sbjct: 15  IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF- 73

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HP+I+   +       I++VME   GGELFD I   G   E+ +  + + IL  V  CH
Sbjct: 74  RHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCH 133

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVL 256
            + V+HRDLKPEN L  D   N   K  DFGLS     GE     C   GSP Y APEV+
Sbjct: 134 RHMVVHRDLKPENVLL-DAHMN--AKIADFGLSNMMSDGEFLRTSC---GSPNYAAPEVI 187

Query: 257 R-RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
             R Y GPE+D+WS+GVI+Y LLCG  PF  +    +   I  G   F    +  ++   
Sbjct: 188 SGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI--FYTPQY--LNPSV 243

Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKND 344
             L+K+ML  +P  R T++++ E+ W K D
Sbjct: 244 ISLLKHMLQVDPMKRATIKDIREHEWFKQD 273

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  249 bits (637), Expect = 5e-78
 Identities = 87/268 (32%), Positives = 135/268 (50%), Gaps = 17/268 (6%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
            Y   + LG G FG        +T +  A K I+++ LK       V RE+  ++ L +H
Sbjct: 10  PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RH 68

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
           P+I+   +       I +V+E   GGELFD IV K   TE       + I+  ++ CH +
Sbjct: 69  PHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH 127

Query: 202 GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR- 257
            ++HRDLKPEN L     +N  +K  DFGLS     G      C   GSP Y APEV+  
Sbjct: 128 KIVHRDLKPENLLL---DDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVING 181

Query: 258 RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
           + Y GPE+DVWS G+++Y++L G  PF  E    +   +      +    +  +S  A+ 
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCV--YVMPDF--LSPGAQS 237

Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKND 344
           L++ M+  +P  R+T++E+  +PW   +
Sbjct: 238 LIRRMIVADPMQRITIQEIRRDPWFNVN 265

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197

 Score =  242 bits (619), Expect = 3e-77
 Identities = 51/194 (26%), Positives = 98/194 (50%), Gaps = 2/194 (1%)

Query: 332 LEEVLENPWIKND-NHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIK 390
           +     +   + +     +V L   +   +K F   N+ KK  L ++A +L   ++  ++
Sbjct: 1   MHHHHHHSSGRENLYFQGHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLR 60

Query: 391 QMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSV 450
            +F  +D D +G L+ +E+ DGL  IG +   PD+  ++   D + +G +   +F+  ++
Sbjct: 61  NIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATI 120

Query: 451 HLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-GDQTIRDILRDVDLDR 509
             +     ++    F+FFD + +G I V+ELK +   D+      D+ I  +L++VDL+ 
Sbjct: 121 DKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNG 180

Query: 510 DGRISFEEFKAMMT 523
           DG I F EF  MM+
Sbjct: 181 DGEIDFHEFMLMMS 194

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  245 bits (627), Expect = 2e-76
 Identities = 72/355 (20%), Positives = 134/355 (37%), Gaps = 54/355 (15%)

Query: 54  HASNVDKKSISFQLRSVVSNPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETYACK 112
             S  D  S    L  +     E +  ++ Y   + L +G+F     C   +  + YA K
Sbjct: 3   LGSMKDILSNYSNLIYLNKYVKEKDKYINDYRIIRTLNQGKFNKIILC--EKDNKFYALK 60

Query: 113 KIAKEKLKTEIDI--------------DDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY 158
           K  K  L+ + D               DD + E++I+  + K+   +T +    + D +Y
Sbjct: 61  KYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI-KNEYCLTCEGIITNYDEVY 119

Query: 159 LVMELCEGGELFDRIVNKGH--------YTERAAAAVGKTILRIVKVCH-ENGVMHRDLK 209
           ++ E  E   +                    +    + K++L      H E  + HRD+K
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVK 179

Query: 210 PENFLFADGSENSQLKAIDFGLSIFFKPGEQ--FCEIVGSPYYMAPEVLRRN---YGPEI 264
           P N L     +N ++K  DFG S +    +        G+  +M PE         G ++
Sbjct: 180 PSNILM---DKNGRVKLSDFGESEYMVDKKIKGSR---GTYEFMPPEFFSNESSYNGAKV 233

Query: 265 DVWSAGVIIYILLCGVPPFWAE-TEEGIAHAIIRGKIDF---------------ERDPWP 308
           D+WS G+ +Y++   V PF  + +   + + I    I++                     
Sbjct: 234 DIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNN 293

Query: 309 KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQF 363
            +S E  + +K  L  NP  R+T E+ L++ W+ + N          +  + K+ 
Sbjct: 294 FLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDLREFSKELYKKRKKL 348

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  232 bits (593), Expect = 6e-72
 Identities = 68/277 (24%), Positives = 127/277 (45%), Gaps = 26/277 (9%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD-VRREVEIMRHLPK 140
           KY  G  LG G +G   +  + ET    A K + K+KL+   + +  V++E++++R L +
Sbjct: 6   KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-R 64

Query: 141 HPNIVTYKE--AYEDKDAIYLVMELCEGG--ELFDRIVNKGHYTERAAAAVGKTILRIVK 196
           H N++   +    E+K  +Y+VME C  G  E+ D +  +  +    A      ++  ++
Sbjct: 65  HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVP-EKRFPVCQAHGYFCQLIDGLE 123

Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ------FCEIVGSPYY 250
             H  G++H+D+KP N L    +    LK    G++    P              GSP +
Sbjct: 124 YLHSQGIVHKDIKPGNLLL---TTGGTLKISALGVAEALHPFAADDTCRTSQ---GSPAF 177

Query: 251 MAPEVLR--RNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
             PE+      + G ++D+WSAGV +Y +  G+ PF  +    +   I +G   +     
Sbjct: 178 QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG--SYAIPGD 235

Query: 308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
                   +L+K ML+  P  R ++ ++ ++ W +  
Sbjct: 236 --CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKK 270

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191

 Score =  227 bits (582), Expect = 6e-72
 Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 6/191 (3%)

Query: 336 LENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYM 395
           + +    +         G +V    K + ++ KF+K  + ++A       + ++K  F +
Sbjct: 1   MHHHHHHSSGRENLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLV 60

Query: 396 MDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRI 455
           +D D  G +T E+LK GL   G K+   +  +L++  D DG+G +   EF+  ++  K++
Sbjct: 61  LDEDGKGYITKEQLKKGLEKDGLKLPY-NFDLLLDQIDSDGSGKIDYTEFIAAALDRKQL 119

Query: 456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLE----DNAGPNGDQTIRDILRDVDLDRDG 511
               I   AFR FD +  G I   EL  +L       N        ++ ++RDVD + DG
Sbjct: 120 SKKLIY-CAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDG 178

Query: 512 RISFEEFKAMM 522
           +I F EF  MM
Sbjct: 179 KIDFHEFSEMM 189

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  229 bits (586), Expect = 7e-71
 Identities = 76/289 (26%), Positives = 132/289 (45%), Gaps = 16/289 (5%)

Query: 64  SFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEI 123
            FQ +  +      N L  +   K++GRG+F   ++   +  G   A KK+    L    
Sbjct: 15  QFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAK 74

Query: 124 DIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIV----NKGHY 179
              D  +E+++++ L  HPN++ Y  ++ + + + +V+EL + G+L   I      K   
Sbjct: 75  ARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLI 133

Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPEN-FLFADGSENSQLKAIDFGLSIFFKPG 238
            ER        +   ++  H   VMHRD+KP N F+ A G     +K  D GL  FF   
Sbjct: 134 PERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG----VVKLGDLGLGRFFSSK 189

Query: 239 EQFCE-IVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEE--GIAHA 294
                 +VG+PYYM+PE +  N Y  + D+WS G ++Y +     PF+ +      +   
Sbjct: 190 TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKK 249

Query: 295 IIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           I +   D+   P    S+E ++LV   ++P+P  R  +  V +     +
Sbjct: 250 IEQC--DYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH 296

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  227 bits (582), Expect = 2e-70
 Identities = 64/291 (21%), Positives = 115/291 (39%), Gaps = 38/291 (13%)

Query: 72  SNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE 131
           ++  +      +   + +G G FG   +      G+TY  K++           +   RE
Sbjct: 2   AHTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAERE 54

Query: 132 VEIMRHLPKHPNIVTYKEAYEDKDA----------------IYLVMELCEGGELFDRIV- 174
           V+ +  L  H NIV Y   ++  D                 +++ ME C+ G L   I  
Sbjct: 55  VKALAKL-DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 113

Query: 175 -NKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI 233
                  +  A  + + I + V   H   +++RDLKP N       +  Q+K  DFGL  
Sbjct: 114 RRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL---VDTKQVKIGDFGLVT 170

Query: 234 FFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIA 292
             K   +     G+  YM+PE +  ++YG E+D+++ G+I+  LL      +  ++    
Sbjct: 171 SLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK--FF 228

Query: 293 HAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
             +  G I           K+ K L++ +L   P +R    E+L    +  
Sbjct: 229 TDLRDGIIS------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  228 bits (583), Expect = 2e-70
 Identities = 60/290 (20%), Positives = 109/290 (37%), Gaps = 46/290 (15%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
            Y F ++LG G F        +  G  YA K+I   + +   D ++ +RE ++ R    H
Sbjct: 30  HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQ---DREEAQREADMHRLF-NH 85

Query: 142 PNIVTYKEAYEDKDA----IYLVMELCEGGELFDRI----VNKGHYTERAAAAVGKTILR 193
           PNI+        +       +L++   + G L++ I          TE         IL 
Sbjct: 86  PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTE-------DQILW 138

Query: 194 I-------VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-------- 238
           +       ++  H  G  HRDLKP N L     +  Q   +D G                
Sbjct: 139 LLLGICRGLEAIHAKGYAHRDLKPTNILL---GDEGQPVLMDLGSMNQACIHVEGSRQAL 195

Query: 239 --EQFCEIVGSPYYMAPEVL----RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIA 292
             + +     +  Y APE+             DVWS G ++Y ++ G  P+    ++G +
Sbjct: 196 TLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS 255

Query: 293 -HAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
               ++ ++       P+ S    +L+ +M+  +P+ R  +  +L     
Sbjct: 256 VALAVQNQLSIP--QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEA 303

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166

 Score =  215 bits (550), Expect = 2e-67
 Identities = 77/165 (46%), Positives = 111/165 (67%), Gaps = 3/165 (1%)

Query: 361 KQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV 420
           KQFS MNKFKK  LRV+A++L ++++A +K+MF M+D DK+G +TFEELK GL  +G  +
Sbjct: 1   KQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANL 60

Query: 421 SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDE 480
            + ++  LM+AADVD +G +   EF+  ++HL +I  +D L  AF +FDK+ SG+I  DE
Sbjct: 61  KESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDE 120

Query: 481 LKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG 525
           L++   E       D  I +++RDVD D DGRI + EF AMM  G
Sbjct: 121 LQQACEEFGV---EDVRIEELMRDVDQDNDGRIDYNEFVAMMQKG 162

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  215 bits (550), Expect = 1e-65
 Identities = 77/300 (25%), Positives = 124/300 (41%), Gaps = 48/300 (16%)

Query: 77  GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMR 136
           G  L  +   + LGRG FG+  +         YA K+I     +   +   V REV+ + 
Sbjct: 1   GRYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELARE--KVMREVKALA 58

Query: 137 HLPKHPNIVTYKEAYEDKDA------------IYLVMELCEGGELFDRIVNKGHYTERAA 184
            L +HP IV Y  A+ +K+             +Y+ M+LC    L D +  +    ER  
Sbjct: 59  KL-EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERER 117

Query: 185 AAVGKTILRI-------VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS----- 232
                  L I       V+  H  G+MHRDLKP N  F   + +  +K  DFGL      
Sbjct: 118 ----SVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDVVKVGDFGLVTAMDQ 170

Query: 233 --------IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPF 283
                          +    VG+  YM+PE +   +Y  ++D++S G+I++ LL    PF
Sbjct: 171 DEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PF 227

Query: 284 WAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
             + E       +R  + F      +       +V++ML P+P  R     ++EN   ++
Sbjct: 228 STQMERVRTLTDVR-NLKFPPLF-TQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFED 285

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191

 Score =  209 bits (533), Expect = 1e-64
 Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 15/188 (7%)

Query: 355 NVTSRIKQFSIMNKFKKKVLRVVADNLP-QDQMAQIKQMFYMMDTDKNGDLTFEELKDGL 413
                +K+F    K  +  +  +   L   ++  ++ Q+F  +D + +G L  +EL +G 
Sbjct: 7   GALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGY 66

Query: 414 -----------NMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILS 462
                      + +     + +V  ++++ D D NG +   EFVT+ +  + + + + L 
Sbjct: 67  RKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLL 126

Query: 463 QAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM 522
            AF+ FD + SG I  +EL  +          D+T   +L++ D + DG + FEEF  MM
Sbjct: 127 AAFQQFDSDGSGKITNEELGRLFGVTEV---DDETWHQVLQECDKNNDGEVDFEEFVEMM 183

Query: 523 TSGADWKM 530
               D K+
Sbjct: 184 QKICDVKV 191

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  211 bits (538), Expect = 5e-64
 Identities = 63/291 (21%), Positives = 120/291 (41%), Gaps = 34/291 (11%)

Query: 76  EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           +     ++   +++G GEFG   +C +   G  YA K+  K      +D  +  REV   
Sbjct: 6   KSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA-GSVDEQNALREVYAH 64

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI----VNKGHYTERAAAAVGKTI 191
             L +H ++V Y  A+ + D + +  E C GG L D I        ++ E     +   +
Sbjct: 65  AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 124

Query: 192 LRIVKVCHENGVMHRDLKPEN-FLFADGSENSQLKAI---------------DFGLSIFF 235
            R ++  H   ++H D+KP N F+      N+  +                 D G     
Sbjct: 125 GRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRI 184

Query: 236 KPGEQFCEIVGSPYYMAPEVLRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAH 293
              +      G   ++A EVL+ N  + P+ D+++  + +       P      +    H
Sbjct: 185 SSPQVE---EGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---WH 238

Query: 294 AIIRGKIDFERDPWPKV-SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
            I +G++       P+V S+E  EL+K M+ P+P  R +   ++++  + +
Sbjct: 239 EIRQGRL----PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS 285

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  213 bits (543), Expect = 2e-63
 Identities = 48/349 (13%), Positives = 100/349 (28%), Gaps = 61/349 (17%)

Query: 40  KKPSPSPKHESVSKHASNVDKKSI-----SFQLRSVVSNPAEGNILDKYTFGKELGRGEF 94
            + +     E +   A ++   S+      F++ S +              G  LG+ + 
Sbjct: 37  PQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPR-----TLVRGTVLGQEDP 91

Query: 95  GITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP--------------- 139
               +  + ETGE++        +      I  ++ EV  +R L                
Sbjct: 92  YAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFI 151

Query: 140 ------KHPNIVTYKEAYEDKD-----AIYLVMELCEG------GELFDRIVNKGHYTER 182
                 K P          D+      + + +    +         L             
Sbjct: 152 FPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHH 211

Query: 183 AAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC 242
           A   +   ++R++   H  G++H  L+P + +     +   +    F   +         
Sbjct: 212 ARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL---DQRGGVFLTGFEHLVRDGASAVSP 268

Query: 243 --EIVGSPYYMAPEVLRRN------YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHA 294
                  P   A  +L              D W+ G+ IY + C   P   +   G +  
Sbjct: 269 IGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEW 328

Query: 295 IIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           I R            + +  + L++  L     +RL   + +E P  + 
Sbjct: 329 IFRS--------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 369

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188

 Score =  200 bits (510), Expect = 3e-61
 Identities = 58/174 (33%), Positives = 107/174 (61%), Gaps = 4/174 (2%)

Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           A+ L ++++  +K++F M+DTD +G +TF+ELKDGL  +G ++ + ++K LM+AAD+D +
Sbjct: 1   AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60

Query: 438 GLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQT 497
           G +   EF+  +VHL ++  ++ L  AF +FDK+ SG+I +DE+++   +       D  
Sbjct: 61  GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGL---DDIH 117

Query: 498 IRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMS-ALSIKLFKD 550
           I D+++++D D DG+I + EF AMM          R+  R  ++   ++ L  +
Sbjct: 118 IDDMIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMRKTLNLRDALGLVDN 171

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188

 Score = 67.6 bits (166), Expect = 3e-13
 Identities = 19/109 (17%), Positives = 38/109 (34%), Gaps = 10/109 (9%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
           ++   +   F   D D +G +T +E++      G  + D  +  +++  D D +G +   
Sbjct: 79  EREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDNDGQIDYG 136

Query: 444 EFVTM--------SVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEV 484
           EF  M         +  + +     L  A    D   +  IE       
Sbjct: 137 EFAAMMRKRKGNGGIGRRTMRKTLNLRDALGLVDNGSNQVIEGYFKHHH 185

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  204 bits (521), Expect = 4e-61
 Identities = 70/295 (23%), Positives = 117/295 (39%), Gaps = 55/295 (18%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           +    + L  G F   ++  ++ +G  YA K++   + +       + +EV  M+ L  H
Sbjct: 29  RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEE---KNRAIIQEVCFMKKLSGH 85

Query: 142 PNIVTY-------KEAYEDKDAIYLVMELCEGGELFDRIVN---KGHYTERAAAAVGKTI 191
           PNIV +       KE  +   A +L++     G+L + +     +G  +         T+
Sbjct: 86  PNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCD-------TV 138

Query: 192 LRI-------VKVCHENG--VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG---- 238
           L+I       V+  H     ++HRDLK EN L    S    +K  DFG +          
Sbjct: 139 LKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL---SNQGTIKLCDFGSATTISHYPDYS 195

Query: 239 ---------EQFCEIVGSPYYMAPEVL----RRNYGPEIDVWSAGVIIYILLCGVPPFWA 285
                    E+      +P Y  PE++        G + D+W+ G I+Y+L     PF  
Sbjct: 196 WSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF-- 253

Query: 286 ETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
             E+G    I+ GK      P          L++ ML  NP  RL++ EV+    
Sbjct: 254 --EDGAKLRIVNGKYSIP--PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  200 bits (509), Expect = 5e-59
 Identities = 54/355 (15%), Positives = 115/355 (32%), Gaps = 53/355 (14%)

Query: 39  SKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITH 98
           S    P   + +  +    +       + +                    LG G F   +
Sbjct: 32  SGLSKPVSSYPNTFEWQCKLPAIKPKTEFQ---------LGSKLVYVHHLLGEGAFAQVY 82

Query: 99  QC-----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED 153
           +       + +  + +  K           +     + +E ++        + +  A+  
Sbjct: 83  EATQGDLNDAKNKQKFVLKVQKPANPW---EFYIGTQLMERLKPS-MQHMFMKFYSAHLF 138

Query: 154 KDAIYLVMELCEGGELFDRIVNKGHYTERA-----AAAVGKTILRIVKVCHENGVMHRDL 208
           ++   LV EL   G L + I    +  E+        +    +L +++  H+  ++H D+
Sbjct: 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDI 198

Query: 209 KPENFLFAD--------GSENSQLKAIDFGLSI---FFKPGEQFCEIVGSPYYMAPEVL- 256
           KP+NF+  +           ++ L  ID G SI    F  G  F     +  +   E+L 
Sbjct: 199 KPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLS 258

Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            + +  +ID +     +Y +L G      + E G        +     D W        E
Sbjct: 259 NKPWNYQIDYFGVAATVYCMLFGTYMKV-KNEGGECKPEGLFRRLPHLDMW-------NE 310

Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKK 371
               ML+    + L   ++L     K            + T++I+  ++ N+   
Sbjct: 311 FFHVMLNIPDCHHLPSLDLLRQKLKKV--------FQQHYTNKIR--ALRNRLIV 355

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score =  194 bits (495), Expect = 2e-57
 Identities = 38/238 (15%), Positives = 78/238 (32%), Gaps = 23/238 (9%)

Query: 307 WPKVSKEAKELVKNM--LDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFS 364
             +++++ +E    +   D    N     E  E             + G     + +  S
Sbjct: 43  EAQIAQKEQEQKAKLAEYDQKVQNEFDARERAE--------REREAARGDAAAEKQRLAS 94

Query: 365 IMNKFKKKV-----LRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQK 419
           ++   +        LR     L ++    ++Q+F       +G  +F++LK  L      
Sbjct: 95  LLKDLEDDASGYNRLRPSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADT 154

Query: 420 VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVD 479
           + +  +K L    + D  G +S    V ++  L        L   FR  D N +G +   
Sbjct: 155 IPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAA------LVADFRKIDTNSNGTLSRK 208

Query: 480 ELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSR 537
           E +E  +    G +       + R  D D    + F E+  +       ++       
Sbjct: 209 EFREHFVRL--GFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADF 264

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score =  134 bits (339), Expect = 3e-35
 Identities = 30/139 (21%), Positives = 63/139 (45%), Gaps = 7/139 (5%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
           + +A +   F  +DT+ NG L+ +E ++    +G          L   AD D +  +   
Sbjct: 185 NDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFD-KKSVQDALFRYADEDESDDVGFS 243

Query: 444 EFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILR 503
           E+V + + L        L   + F D ++SG +  +E+++VL + +   +  +       
Sbjct: 244 EYVHLGLCLLV------LRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFS 297

Query: 504 DVDLDRDGRISFEEFKAMM 522
            VD+D    +S++EF  ++
Sbjct: 298 VVDVDDSKSLSYQEFVMLV 316

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score = 55.6 bits (134), Expect = 2e-08
 Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 1/69 (1%)

Query: 385 QMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIG-QKVSDPDVKMLMEAADVDGNGLLSCD 443
            +  ++ ++   D DK+G L+ EE++  L      + +    +      DVD +  LS  
Sbjct: 251 CLLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQ 310

Query: 444 EFVTMSVHL 452
           EFV + + +
Sbjct: 311 EFVMLVLLM 319

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180

 Score =  188 bits (479), Expect = 7e-57
 Identities = 43/183 (23%), Positives = 84/183 (45%), Gaps = 16/183 (8%)

Query: 352 LGGNVTSRIKQFSIMNKFKKKVLRVVADNLP--QDQMAQIKQMFYMMDTDKNGDLTFEEL 409
           +  NV + +K +   +  +  ++ ++A  L    + +  I ++FY +DT+ NG L+  E+
Sbjct: 2   ISPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREI 61

Query: 410 KDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFD 469
              L  +G K    D+  +++A D++  G ++  EF+      K I     L  AF   D
Sbjct: 62  YTVLASVGIK--KWDINRILQALDINDRGNITYTEFMAGCYRWKNI-ESTFLKAAFNKID 118

Query: 470 KNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDG--------RISFEEFKAM 521
           K++ G+I   ++  ++ +       +  I +    V   + G        +ISF+EFK  
Sbjct: 119 KDEDGYISKSDIVSLVHDKVL---DNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDY 175

Query: 522 MTS 524
           M S
Sbjct: 176 MLS 178

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  192 bits (490), Expect = 8e-57
 Identities = 86/322 (26%), Positives = 135/322 (41%), Gaps = 49/322 (15%)

Query: 36  DASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFG 95
           D ++ +P P       ++      KK                   + + FGK LG G F 
Sbjct: 2   DGTAAEPRPGAGSLQHAQPPPQPRKKR-----------------PEDFKFGKILGEGSFS 44

Query: 96  ITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD 155
                 E+ T   YA K + K  +  E  +  V RE ++M  L  HP  V     ++D +
Sbjct: 45  TVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDE 103

Query: 156 AIYLVMELCEGGELFDRIVNKGHYTERAA---AAVGKTILRIVKVCHENGVMHRDLKPEN 212
            +Y  +   + GEL   I   G + E       A    I+  ++  H  G++HRDLKPEN
Sbjct: 104 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA---EIVSALEYLHGKGIIHRDLKPEN 160

Query: 213 FLF-ADGSENSQLKAIDFGLS-IFFKPGEQ-----FCEIVGSPYYMAPEVLRRN-YGPEI 264
            L   D      ++  DFG + +     +Q     F    G+  Y++PE+L         
Sbjct: 161 ILLNEDM----HIQITDFGTAKVLSPESKQARANSFV---GTAQYVSPELLTEKSACKSS 213

Query: 265 DVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDP 324
           D+W+ G IIY L+ G+PPF A  E  I   II+ + DF   P  K   +A++LV+ +L  
Sbjct: 214 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF---P-EKFFPKARDLVEKLLVL 269

Query: 325 NPYNRLT------LEEVLENPW 340
           +   RL          +  +P+
Sbjct: 270 DATKRLGCEEMEGYGPLKAHPF 291

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204

 Score =  185 bits (471), Expect = 2e-55
 Identities = 46/209 (22%), Positives = 88/209 (42%), Gaps = 17/209 (8%)

Query: 347 APNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTF 406
            P   LG   +      + M K + + L   A       +  + + F  +D D +  L  
Sbjct: 5   VPRGPLG---SHMDAVDATMEKLRAQCLSRGAS-----GIQGLARFFRQLDRDGSRSLDA 56

Query: 407 EELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFR 466
           +E + GL  +G  +   + + +    D +G+G L  +EF+           + +++ AF 
Sbjct: 57  DEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFA 116

Query: 467 FFDKNQSGFIEVDELKEVLLEDNAGPNG------DQTIRDILRDVDL-DRDGRISFEEFK 519
             D++  G + VD+L+ V                D+ +R  L + D  ++DG+++  EF+
Sbjct: 117 KLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQ 176

Query: 520 AMMTSGADWKMASRQYSRAMM-SALSIKL 547
              + G    M + +   AMM SA  +KL
Sbjct: 177 DYYS-GVSASMNTDEEFVAMMTSAWQLKL 204

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  181 bits (461), Expect = 3e-52
 Identities = 84/324 (25%), Positives = 142/324 (43%), Gaps = 41/324 (12%)

Query: 28  ASTNNKRNDASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGK 87
           A+   K ++  S K   +   E   K      + +                 LD++   K
Sbjct: 3   AAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQ---------------LDQFDRIK 47

Query: 88  ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
            LG G FG        E+G  YA K + K+K+     I+    E  I++ +   P +V  
Sbjct: 48  TLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKL 106

Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRD 207
           + +++D   +Y+VME   GGE+F  +   G ++E  A      I+   +  H   +++RD
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 166

Query: 208 LKPENFLF-ADGSENSQLKAIDFGLSIFFKPGEQ----FCEIVGSPYYMAPEVLRRN-YG 261
           LKPEN L    G     ++  DFG +   K  +      C   G+P  +APE++    Y 
Sbjct: 167 LKPENLLIDQQG----YIQVTDFGFA---KRVKGRTWTLC---GTPEALAPEIILSKGYN 216

Query: 262 PEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNM 321
             +D W+ GV+IY +  G PPF+A+    I   I+ GK+ F   P    S + K+L++N+
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF---P-SHFSSDLKDLLRNL 272

Query: 322 LDPNPYNRL-----TLEEVLENPW 340
           L  +   R       + ++  + W
Sbjct: 273 LQVDLTKRFGNLKNGVNDIKNHKW 296

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  179 bits (457), Expect = 8e-52
 Identities = 70/324 (21%), Positives = 117/324 (36%), Gaps = 19/324 (5%)

Query: 26  NTASTNNKRNDASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTF 85
            + S+    + AS  K   S   +         D + +    +    +      +   T 
Sbjct: 3   GSVSSGQAHSLASLAKTWSSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTH 62

Query: 86  GKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV 145
              +GRG FG  H+  + +TG   A KK+  E  + E        E+     L   P IV
Sbjct: 63  QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVE--------ELVACAGL-SSPRIV 113

Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMH 205
               A  +   + + MEL EGG L   I   G   E  A       L  ++  H   ++H
Sbjct: 114 PLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 173

Query: 206 RDLKPENFLFADGSENSQLKAIDFGLS------IFFKPGEQFCEIVGSPYYMAPEVLRRN 259
            D+K +N L    S+ S+    DFG +         K       I G+  +MAPEV+   
Sbjct: 174 GDVKADNVLL--SSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 231

Query: 260 -YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
               ++D+WS+  ++  +L G  P+       +   I          P P  +    + +
Sbjct: 232 PCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIP-PSCAPLTAQAI 290

Query: 319 KNMLDPNPYNRLTLEEVLENPWIK 342
           +  L   P +R +  E+       
Sbjct: 291 QEGLRKEPVHRASAMELRRKVGKA 314

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score =  178 bits (455), Expect = 1e-51
 Identities = 77/278 (27%), Positives = 124/278 (44%), Gaps = 32/278 (11%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L  +   + LG G FG  H       G  YA K + KE +     ++    E  ++  + 
Sbjct: 5   LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV- 63

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA---AAVGKTILRIVK 196
            HP I+     ++D   I+++M+  EGGELF  +     +    A   AA    +   ++
Sbjct: 64  THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAA---EVCLALE 120

Query: 197 VCHENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLSIFFKPGEQ----FCEIVGSPYYM 251
             H   +++RDLKPEN L   +G     +K  DFG +   K         C   G+P Y+
Sbjct: 121 YLHSKDIIYRDLKPENILLDKNG----HIKITDFGFA---KYVPDVTYTLC---GTPDYI 170

Query: 252 APEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APEV+    Y   ID WS G++IY +L G  PF+          I+  ++ F   P P  
Sbjct: 171 APEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF---P-PFF 226

Query: 311 SKEAKELVKNMLDPNPYNRL-----TLEEVLENPWIKN 343
           +++ K+L+  ++  +   RL       E+V  +PW K 
Sbjct: 227 NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKE 264

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  179 bits (456), Expect = 5e-51
 Identities = 70/276 (25%), Positives = 129/276 (46%), Gaps = 24/276 (8%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
            D +   + +G+G FG      + +T + YA K + K+K     ++ +V +E++IM+ L 
Sbjct: 14  FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL- 72

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA---AAVGKTILRIVK 196
           +HP +V    +++D++ +++V++L  GG+L   +    H+ E            ++  + 
Sbjct: 73  EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFIC---ELVMALD 129

Query: 197 VCHENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
                 ++HRD+KP+N L    G     +   DF ++       Q   + G+  YMAPE+
Sbjct: 130 YLQNQRIIHRDMKPDNILLDEHG----HVHITDFNIAAMLPRETQITTMAGTKPYMAPEM 185

Query: 256 LRRN----YGPEIDVWSAGVIIYILLCGVPPFW---AETEEGIAHAIIRGKIDFERDPWP 308
                   Y   +D WS GV  Y LL G  P+    + + + I H      + +   P  
Sbjct: 186 FSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTY---P-S 241

Query: 309 KVSKEAKELVKNMLDPNPYNRL-TLEEVLENPWIKN 343
             S+E   L+K +L+PNP  R   L +V   P++ +
Sbjct: 242 AWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND 277

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  174 bits (444), Expect = 4e-49
 Identities = 82/280 (29%), Positives = 124/280 (44%), Gaps = 24/280 (8%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
            + Y   K +GRG FG         T + YA K ++K ++    D      E +IM    
Sbjct: 68  AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA- 126

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P +V    A++D   +Y+VME   GG+L   +++     E+ A      ++  +   H
Sbjct: 127 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDAIH 185

Query: 200 ENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLSIFFKPGEQ-----FCEIVGSPYYMAP 253
             G +HRD+KP+N L    G     LK  DFG  +                 G+P Y++P
Sbjct: 186 SMGFIHRDVKPDNMLLDKSG----HLKLADFGTCMKMNKEGMVRCDTAV---GTPDYISP 238

Query: 254 EVLRR-----NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP 308
           EVL+       YG E D WS GV +Y +L G  PF+A++  G    I+  K         
Sbjct: 239 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDN 298

Query: 309 KVSKEAKELVKNMLDPNPYNRLT---LEEVLENPWIKNDN 345
            +SKEAK L+   L  +   RL    +EE+  + + KND 
Sbjct: 299 DISKEAKNLICAFLT-DREVRLGRNGVEEIKRHLFFKNDQ 337

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  171 bits (436), Expect = 5e-49
 Identities = 80/313 (25%), Positives = 149/313 (47%), Gaps = 26/313 (8%)

Query: 39  SKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITH 98
                     E++   +  V  +     LR VV     G+         ++G G  GI  
Sbjct: 6   HHSSGVDLGTENLYFQSGVVTHEQFKAALRMVVDQ---GDPRLLLDSYVKIGEGSTGIVC 62

Query: 99  QCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY 158
              E  +G   A K +    L+ +   + +  EV IMR   +H N+V   ++Y   + ++
Sbjct: 63  LAREKHSGRQVAVKMM---DLRKQQRRELLFNEVVIMRDY-QHFNVVEMYKSYLVGEELW 118

Query: 159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADG 218
           ++ME  +GG L D IV++    E   A V + +L+ +   H  GV+HRD+K ++ L    
Sbjct: 119 VLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL--- 174

Query: 219 SENSQLKAIDFGLSIFFKPGEQFCE-------IVGSPYYMAPEVLRRN-YGPEIDVWSAG 270
           + + ++K  DFG         Q  +       +VG+PY+MAPEV+ R+ Y  E+D+WS G
Sbjct: 175 TLDGRVKLSDFGFC------AQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLG 228

Query: 271 VIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRL 330
           +++  ++ G PP+++++       +        ++   KVS   ++ ++ ML  +P  R 
Sbjct: 229 IMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNS-HKVSPVLRDFLERMLVRDPQERA 287

Query: 331 TLEEVLENPWIKN 343
           T +E+L++P++  
Sbjct: 288 TAQELLDHPFLLQ 300

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  170 bits (433), Expect = 8e-49
 Identities = 66/267 (24%), Positives = 124/267 (46%), Gaps = 14/267 (5%)

Query: 85  FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNI 144
           F  E+GRG F   ++  + ET    A  ++   KL    +    + E E+++ L +HPNI
Sbjct: 30  FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKS-ERQRFKEEAEMLKGL-QHPNI 87

Query: 145 VTYKEAYED----KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           V + +++E     K  I LV EL   G L   +        +   +  + IL+ ++  H 
Sbjct: 88  VRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT 147

Query: 201 NG--VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR 258
               ++HRDLK +N +F  G     +K  D GL+   K       ++G+P +MAPE+   
Sbjct: 148 RTPPIIHRDLKCDN-IFITG-PTGSVKIGDLGLATL-KRASFAKAVIGTPEFMAPEMYEE 204

Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV-SKEAKEL 317
            Y   +DV++ G+ +  +     P ++E  +  A    R     +   + KV   E KE+
Sbjct: 205 KYDESVDVYAFGMCMLEMATSEYP-YSE-CQNAAQIYRRVTSGVKPASFDKVAIPEVKEI 262

Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKND 344
           ++  +  N   R +++++L + + + +
Sbjct: 263 IEGCIRQNKDERYSIKDLLNHAFFQEE 289

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  169 bits (430), Expect = 2e-48
 Identities = 74/277 (26%), Positives = 121/277 (43%), Gaps = 20/277 (7%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
            D+      LG+G +GI +   ++      A K+I     +       +  E+ + +HL 
Sbjct: 21  YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEI---PERDSRYSQPLHEEIALHKHL- 76

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG---HYTERAAAAVGKTILRIVK 196
           KH NIV Y  ++ +   I + ME   GG L   + +K       E+      K IL  +K
Sbjct: 77  KHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLK 136

Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEV 255
             H+N ++HRD+K +N L    + +  LK  DFG S              G+  YMAPE+
Sbjct: 137 YLHDNQIVHRDIKGDNVLI--NTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEI 194

Query: 256 LRRN---YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP---K 309
           + +    YG   D+WS G  I  +  G PP + E  E  A A+   K+   +        
Sbjct: 195 IDKGPRGYGKAADIWSLGCTIIEMATGKPP-FYELGEPQA-AMF--KVGMFKVHPEIPES 250

Query: 310 VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH 346
           +S EAK  +    +P+P  R    ++L + ++K  + 
Sbjct: 251 MSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSK 287

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score =  170 bits (432), Expect = 5e-48
 Identities = 80/276 (28%), Positives = 133/276 (48%), Gaps = 23/276 (8%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           +D + F + LG+G FG        ETG+ YA K + K+ +  + D++    E  I+    
Sbjct: 22  IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR 81

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
            HP +      ++  D ++ VME   GG+L   I     + E  A      I+  +   H
Sbjct: 82  NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLH 141

Query: 200 ENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLS-IFFKPGEQ---FCEIVGSPYYMAPE 254
           + G+++RDLK +N L   +G      K  DFG+       G     FC   G+P Y+APE
Sbjct: 142 DKGIIYRDLKLDNVLLDHEG----HCKLADFGMCKEGICNGVTTATFC---GTPDYIAPE 194

Query: 255 VLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           +L+   YGP +D W+ GV++Y +LCG  PF AE E+ +  AI+  ++ +       + ++
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTW----LHED 250

Query: 314 AKELVKNMLDPNPYNRL------TLEEVLENPWIKN 343
           A  ++K+ +  NP  RL          +L +P+ K 
Sbjct: 251 ATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKE 286

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  176 bits (448), Expect = 1e-47
 Identities = 72/358 (20%), Positives = 136/358 (37%), Gaps = 26/358 (7%)

Query: 1   MGSCISLARKGAFFSKKSQAIGNIDNTASTNNKRNDASSKKPSPSPKHESVSKHASNVDK 60
             + I              AI ++           D          ++         ++ 
Sbjct: 109 FDTYIMKELLACSHPFSKSAIEHVQGHLVKKQVPPDLFQPYIEEICQNLRGDVFQKFIES 168

Query: 61  KSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK 120
              +   +           ++ ++  + +GRG FG  + C + +TG+ YA K + K+++K
Sbjct: 169 DKFTRFCQWKNVELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK 228

Query: 121 TEIDIDDVRREVEIMR--HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH 178
            +        E  ++        P IV    A+   D +  +++L  GG+L   +   G 
Sbjct: 229 MKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV 288

Query: 179 YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLSIFFKP 237
           ++E         I+  ++  H   V++RDLKP N L    G     ++  D GL+  F  
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG----HVRISDLGLACDFSK 344

Query: 238 GEQ--FCEIVGSPYYMAPEVLRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETE---EG 290
            +        G+  YMAPEVL++   Y    D +S G +++ LL G  PF          
Sbjct: 345 KKPHASV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE 401

Query: 291 IAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRL-----TLEEVLENPWIKN 343
           I    +   ++         S E + L++ +L  +   RL       +EV E+P+ ++
Sbjct: 402 IDRMTLTMAVELP----DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score =  168 bits (428), Expect = 2e-47
 Identities = 72/271 (26%), Positives = 127/271 (46%), Gaps = 18/271 (6%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++ +   K LG+G FG        +T + +A K + K+ +  + D++    E  ++    
Sbjct: 16  IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 75

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HP +      ++ K+ ++ VME   GG+L   I +   +    A      I+  ++  H
Sbjct: 76  EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 135

Query: 200 ENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLS-IFFKPGEQ---FCEIVGSPYYMAPE 254
             G+++RDLK +N L   DG     +K  DFG+         +   FC   G+P Y+APE
Sbjct: 136 SKGIVYRDLKLDNILLDKDG----HIKIADFGMCKENMLGDAKTNTFC---GTPDYIAPE 188

Query: 255 VLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           +L    Y   +D WS GV++Y +L G  PF  + EE + H+I      + R     + KE
Sbjct: 189 ILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRW----LEKE 244

Query: 314 AKELVKNMLDPNPYNRL-TLEEVLENPWIKN 343
           AK+L+  +    P  RL    ++ ++P  + 
Sbjct: 245 AKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 275

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score =  168 bits (428), Expect = 2e-47
 Identities = 73/275 (26%), Positives = 125/275 (45%), Gaps = 22/275 (8%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L  + F   LG+G FG         T E YA K + K+ +  + D++    E  ++    
Sbjct: 19  LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 78

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           K P +      ++  D +Y VME   GG+L   I   G + E  A      I   +    
Sbjct: 79  KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 138

Query: 200 ENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLS-IFFKPGEQ---FCEIVGSPYYMAPE 254
             G+++RDLK +N +  ++G     +K  DFG+       G     FC   G+P Y+APE
Sbjct: 139 SKGIIYRDLKLDNVMLDSEG----HIKIADFGMCKENIWDGVTTKTFC---GTPDYIAPE 191

Query: 255 VLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           ++    YG  +D W+ GV++Y +L G  PF  E E+ +  +I+   + + +     +SKE
Sbjct: 192 IIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKE 247

Query: 314 AKELVKNMLDPNPYNRL-----TLEEVLENPWIKN 343
           A  + K ++  +P  RL        ++ E+ + + 
Sbjct: 248 AVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 282

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  173 bits (441), Expect = 2e-47
 Identities = 88/314 (28%), Positives = 140/314 (44%), Gaps = 17/314 (5%)

Query: 41  KPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFG--KELGRGEFGITH 98
           +      HE +S         SI F  R +     E   + K TF   + LG+G FG   
Sbjct: 143 QELTRLTHEYLSVAPFADYLDSIYFN-RFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVC 201

Query: 99  QCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY 158
            C    TG+ YACKK+ K+++K          E +I+  +     +V+   AYE KDA+ 
Sbjct: 202 ACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALC 260

Query: 159 LVMELCEGGELFDRI--VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLF- 215
           LV+ L  GG+L   I  + +  + E  A      I   ++  H   +++RDLKPEN L  
Sbjct: 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLD 320

Query: 216 ADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIY 274
             G     ++  D GL++    G+     VG+  YMAPEV++   Y    D W+ G ++Y
Sbjct: 321 DHG----HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLY 376

Query: 275 ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRL---- 330
            ++ G  PF    ++     + R   +   +   + S +A+ L   +L  +P  RL    
Sbjct: 377 EMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRG 436

Query: 331 -TLEEVLENPWIKN 343
            +  EV E+P  K 
Sbjct: 437 GSAREVKEHPLFKK 450

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  169 bits (430), Expect = 4e-47
 Identities = 70/285 (24%), Positives = 121/285 (42%), Gaps = 28/285 (9%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
            D +   K +GRG F         +TG+ YA K + K  +    ++   R E +++ +  
Sbjct: 60  RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG- 118

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKVC 198
               I     A++D++ +YLVME   GG+L   +   G       A      I+  +   
Sbjct: 119 DRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSV 178

Query: 199 HENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLSIFFKPGEQ-----FCEIVGSPYYMA 252
           H  G +HRD+KP+N L    G     ++  DFG  +  +              G+P Y++
Sbjct: 179 HRLGYVHRDIKPDNILLDRCG----HIRLADFGSCLKLRADGTVRSLVAV---GTPDYLS 231

Query: 253 PEVLRR--------NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER 304
           PE+L+         +YGPE D W+ GV  Y +  G  PF+A++       I+  K     
Sbjct: 232 PEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSL 291

Query: 305 DPWPK-VSKEAKELVKNMLDPNPYNRLT---LEEVLENPWIKNDN 345
               + V +EA++ ++ +L   P  RL      +   +P+    +
Sbjct: 292 PLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLD 335

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score =  160 bits (406), Expect = 6e-47
 Identities = 26/136 (19%), Positives = 62/136 (45%), Gaps = 8/136 (5%)

Query: 390 KQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMS 449
           + +F  +D + +G +++EE+K  ++      ++  ++++ ++ D DGNG +  +EF    
Sbjct: 3   EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62

Query: 450 VHLKRIGNDDI---LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVD 506
             ++     D    L   ++  D +  G +  +E+           +G + + + +   D
Sbjct: 63  GSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFF-----KKHGIEKVAEQVMKAD 117

Query: 507 LDRDGRISFEEFKAMM 522
            + DG I+ EEF    
Sbjct: 118 ANGDGYITLEEFLEFS 133

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score = 64.5 bits (158), Expect = 1e-12
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 1/65 (1%)

Query: 460 ILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFK 519
           +    F+  D N  G +  +E+K  + +  A  N    ++ I + +D D +G I   EF 
Sbjct: 1   MAEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQL-LQLIFKSIDADGNGEIDQNEFA 59

Query: 520 AMMTS 524
               S
Sbjct: 60  KFYGS 64

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score = 51.4 bits (124), Expect = 4e-08
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
           D    +K ++ +MD D +G LT EE+       G       V   +  AD +G+G ++ +
Sbjct: 72  DDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVMKADANGDGYITLE 127

Query: 444 EFVTM 448
           EF+  
Sbjct: 128 EFLEF 132

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  165 bits (420), Expect = 7e-47
 Identities = 85/289 (29%), Positives = 150/289 (51%), Gaps = 26/289 (8%)

Query: 63  ISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           I  +LRS+VS    G+   KYT  +++G+G  G  +   ++ TG+  A +++    L+ +
Sbjct: 5   ILEKLRSIVSV---GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQ 58

Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTER 182
              + +  E+ +MR   K+PNIV Y ++Y   D +++VME   GG L D +V +    E 
Sbjct: 59  PKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEG 116

Query: 183 AAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC 242
             AAV +  L+ ++  H N V+HRD+K +N L      +  +K  DFG         Q  
Sbjct: 117 QIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFC------AQIT 167

Query: 243 E-------IVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHA 294
                   +VG+PY+MAPEV+ R  YGP++D+WS G++   ++ G PP+  E      + 
Sbjct: 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227

Query: 295 IIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           I        ++P  K+S   ++ +   L+ +   R + +E+L++ ++K 
Sbjct: 228 IATNGTPELQNP-EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKI 275

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220

 Score =  162 bits (412), Expect = 9e-47
 Identities = 36/180 (20%), Positives = 65/180 (36%), Gaps = 8/180 (4%)

Query: 339 PWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDT 398
           P + N        + G+       + +    +      + + +P DQ  +I Q F  +D 
Sbjct: 3   PPVANFCLWNLQPIQGSWMGAACIYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVDR 62

Query: 399 DKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGND 458
           D++G L   EL  G    G ++S      +M   D D NG +S  EF+ M   ++     
Sbjct: 63  DRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFMEL---- 118

Query: 459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEF 518
                 F    + +SG +E  E+   L +   G   +Q    +L  +            +
Sbjct: 119 --AYNLFVMNARARSGTLEPHEILPALQQ--LGFYINQRTSLLLHRLFARGMAFCDLNCW 174

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220

 Score = 72.5 bits (178), Expect = 1e-14
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
           + Q F   D+++SG +E++EL           +  QT   ++R  D D +G ISF EF A
Sbjct: 53  IYQWFMGVDRDRSGTLEINELMMGQFPGGIRLS-PQTALRMMRIFDTDFNGHISFYEFMA 111

Query: 521 MMTSGADWKMASRQY 535
           M              
Sbjct: 112 MYKFMELAYNLFVMN 126

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220

 Score = 62.9 bits (153), Expect = 2e-11
 Identities = 12/99 (12%), Positives = 30/99 (30%), Gaps = 12/99 (12%)

Query: 386 MAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEF 445
           M     +F M    ++G L   E+   L  +G  ++     +L       G      + +
Sbjct: 116 MELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRL-FARGMAFCDLNCW 174

Query: 446 VTMSVHLKRIGNDDILSQAFR-----FFDKNQSGFIEVD 479
           + +     +         A++      +      F  ++
Sbjct: 175 IAICAFAAQ------TRSAYQMIFMNPYYGPMKPFNPME 207

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score =  172 bits (438), Expect = 1e-46
 Identities = 74/320 (23%), Positives = 139/320 (43%), Gaps = 22/320 (6%)

Query: 35  NDASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEF 94
               +++     +   + +     ++K+ +   +   +   +   L  + F   LG+G F
Sbjct: 295 GSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSF 354

Query: 95  GITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK 154
           G         T E YA K + K+ +  + D++    E  ++    K P +      ++  
Sbjct: 355 GKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM 414

Query: 155 DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFL 214
           D +Y VME   GG+L   I   G + E  A      I   +      G+++RDLK +N +
Sbjct: 415 DRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVM 474

Query: 215 F-ADGSENSQLKAIDFGLS-IFFKPGEQ---FCEIVGSPYYMAPEVLRRN-YGPEIDVWS 268
             ++G     +K  DFG+       G     FC   G+P Y+APE++    YG  +D W+
Sbjct: 475 LDSEG----HIKIADFGMCKENIWDGVTTKTFC---GTPDYIAPEIIAYQPYGKSVDWWA 527

Query: 269 AGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYN 328
            GV++Y +L G  PF  E E+ +  +I+   + + +     +SKEA  + K ++  +P  
Sbjct: 528 FGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKEAVAICKGLMTKHPGK 583

Query: 329 RL-----TLEEVLENPWIKN 343
           RL        ++ E+ + + 
Sbjct: 584 RLGCGPEGERDIKEHAFFRY 603

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  168 bits (427), Expect = 2e-46
 Identities = 70/283 (24%), Positives = 126/283 (44%), Gaps = 26/283 (9%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
            + +   K +GRG FG           + +A K + K ++    +    R E +++ +  
Sbjct: 73  REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG- 131

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVC 198
               I T   A++D + +YLVM+   GG+L   +   +    E  A      ++  +   
Sbjct: 132 DSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSV 191

Query: 199 HENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLSIFFKPGEQ-----FCEIVGSPYYMA 252
           H+   +HRD+KP+N L   +G     ++  DFG  +                 G+P Y++
Sbjct: 192 HQLHYVHRDIKPDNILMDMNG----HIRLADFGSCLKLMEDGTVQSSVAV---GTPDYIS 244

Query: 253 PEVLRRN------YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP 306
           PE+L+        YGPE D WS GV +Y +L G  PF+AE+       I+  K  F+   
Sbjct: 245 PEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPT 304

Query: 307 W-PKVSKEAKELVKNMLDPNPYNRLT---LEEVLENPWIKNDN 345
               VS+ AK+L++ ++     +RL    +E+  ++P+    +
Sbjct: 305 QVTDVSENAKDLIRRLICSRE-HRLGQNGIEDFKKHPFFSGID 346

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score =  165 bits (419), Expect = 3e-46
 Identities = 87/275 (31%), Positives = 138/275 (50%), Gaps = 23/275 (8%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++ + + K LG+G FG      E  TG  YA K + KE +  + ++     E  ++++  
Sbjct: 4   MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT- 62

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HP +   K A++  D +  VME   GGELF  +  +  +TE  A   G  I+  ++  H
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122

Query: 200 ENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLS-IFFKPGEQ---FCEIVGSPYYMAPE 254
              V++RD+K EN +   DG     +K  DFGL       G     FC   G+P Y+APE
Sbjct: 123 SRDVVYRDIKLENLMLDKDG----HIKITDFGLCKEGISDGATMKTFC---GTPEYLAPE 175

Query: 255 VLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           VL  N YG  +D W  GV++Y ++CG  PF+ +  E +   I+  +I F R     +S E
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPE 231

Query: 314 AKELVKNMLDPNPYNRL-----TLEEVLENPWIKN 343
           AK L+  +L  +P  RL       +EV+E+ +  +
Sbjct: 232 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score =  165 bits (421), Expect = 5e-46
 Identities = 74/331 (22%), Positives = 141/331 (42%), Gaps = 32/331 (9%)

Query: 34  RNDASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGE 93
            +        P+ ++        +  ++             +    L  +   + +GRG 
Sbjct: 5   HHHHHHDYDIPTTENLYFQGAMGSGIEEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGS 64

Query: 94  FGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED 153
           +         +T   YA + + KE +  + DID V+ E  +      HP +V     ++ 
Sbjct: 65  YAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT 124

Query: 154 KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENF 213
           +  ++ V+E   GG+L   +  +    E  A      I   +   HE G+++RDLK +N 
Sbjct: 125 ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNV 184

Query: 214 LF-ADGSENSQLKAIDFGLS-IFFKPGEQ---FCEIVGSPYYMAPEVLRRN-YGPEIDVW 267
           L  ++G     +K  D+G+     +PG+    FC   G+P Y+APE+LR   YG  +D W
Sbjct: 185 LLDSEG----HIKLTDYGMCKEGLRPGDTTSTFC---GTPNYIAPEILRGEDYGFSVDWW 237

Query: 268 SAGVIIYILLCGVPPFW---------AETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
           + GV+++ ++ G  PF            TE+ +   I+  +I   R     +S +A  ++
Sbjct: 238 ALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS----LSVKAASVL 293

Query: 319 KNMLDPNPYNRL------TLEEVLENPWIKN 343
           K+ L+ +P  RL         ++  +P+ +N
Sbjct: 294 KSFLNKDPKERLGCHPQTGFADIQGHPFFRN 324

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161

 Score =  158 bits (402), Expect = 6e-46
 Identities = 42/162 (25%), Positives = 80/162 (49%), Gaps = 5/162 (3%)

Query: 366 MNKFKK-KVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPD 424
           M+K +       +   L ++Q  +I + F + D + +G L + ELK  +  +G ++   +
Sbjct: 1   MSKNRSSLQSGPLNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKRE 60

Query: 425 VKMLMEAADVDGNGLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKE 483
           +  L++  D +G  L+  D+F   M   + +    D + +AF+ FD + +G I +  L+ 
Sbjct: 61  ILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRR 120

Query: 484 VLLEDNAGPN-GDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           V      G    D+ +R ++ + DLD DG I+  EF A+ T 
Sbjct: 121 VA--KELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD 160

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score =  164 bits (417), Expect = 7e-46
 Identities = 74/285 (25%), Positives = 132/285 (46%), Gaps = 32/285 (11%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L  +   + +GRG +         +T   YA K + KE +  + DID V+ E  +     
Sbjct: 8   LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
            HP +V     ++ +  ++ V+E   GG+L   +  +    E  A      I   +   H
Sbjct: 68  NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127

Query: 200 ENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLS-IFFKPGEQ---FCEIVGSPYYMAPE 254
           E G+++RDLK +N L  ++G     +K  D+G+     +PG+    FC   G+P Y+APE
Sbjct: 128 ERGIIYRDLKLDNVLLDSEG----HIKLTDYGMCKEGLRPGDTTSTFC---GTPNYIAPE 180

Query: 255 VLRRN-YGPEIDVWSAGVIIYILLCGVPPFW---------AETEEGIAHAIIRGKIDFER 304
           +LR   YG  +D W+ GV+++ ++ G  PF            TE+ +   I+  +I   R
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 240

Query: 305 DPWPKVSKEAKELVKNMLDPNPYNRL------TLEEVLENPWIKN 343
                +S +A  ++K+ L+ +P  RL         ++  +P+ +N
Sbjct: 241 S----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219

 Score =  159 bits (403), Expect = 1e-45
 Identities = 28/172 (16%), Positives = 70/172 (40%), Gaps = 14/172 (8%)

Query: 368 KFKKKVLRVVADNLP----QDQMAQIKQMFYMMDTDKNGDLTFEELKDGL-NMIGQKVSD 422
           K +K+    +   +P     +   +  ++F   D ++ G L ++E+  G   ++      
Sbjct: 25  KDRKEAWERIRQAIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFT 84

Query: 423 PDVKMLMEAA---------DVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQS 473
             V+ + + A          ++  G     EF+   + L  I +   L+  F   D + +
Sbjct: 85  SRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLMLCYIYDFFELTVMFDEIDASGN 144

Query: 474 GFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG 525
             ++ +E K  + +  A     +    + +++D +  G ++F+EF A  ++ 
Sbjct: 145 MLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAAWASAV 196

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219

 Score = 57.2 bits (138), Expect = 2e-09
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 1/78 (1%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQK-VSDPDVKMLMEAADVDGNGLLSC 442
               ++  MF  +D   N  +  EE K  +  +        D   L +  D +G G ++ 
Sbjct: 127 YDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTF 186

Query: 443 DEFVTMSVHLKRIGNDDI 460
           DEF   +  +K   + D 
Sbjct: 187 DEFAAWASAVKLDADGDP 204

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score =  163 bits (414), Expect = 2e-45
 Identities = 81/337 (24%), Positives = 155/337 (45%), Gaps = 34/337 (10%)

Query: 30  TNNKRNDASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNI-LDKYTFGKE 88
            ++  +       S      S           ++  +LR+         + ++ +   K 
Sbjct: 2   AHHHHHHEEEGGSSGGAAGTSADGGDGGEQLLTVKHELRTANLTGHAEKVGIENFELLKV 61

Query: 89  LGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEI-DIDDVRREVEIMRHLPKHPNI 144
           LG G +G      +I   +TG+ YA K + K  +  +    +  R E +++ H+ + P +
Sbjct: 62  LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121

Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
           VT   A++ +  ++L+++   GGELF  +  +  +TE         I+  ++  H+ G++
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGII 181

Query: 205 HRDLKPENFLF-ADGSENSQLKAIDFGLSIFFKPGEQ-----FCEIVGSPYYMAPEVLRR 258
           +RD+K EN L  ++G     +   DFGLS  F   E      FC   G+  YMAP+++R 
Sbjct: 182 YRDIKLENILLDSNG----HVVLTDFGLSKEFVADETERAYDFC---GTIEYMAPDIVRG 234

Query: 259 N---YGPEIDVWSAGVIIYILLCGVPPFWAETEEG----IAHAIIRGKIDFERDPWPKVS 311
               +   +D WS GV++Y LL G  PF  + E+     I+  I++ +  +   P  ++S
Sbjct: 235 GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY---P-QEMS 290

Query: 312 KEAKELVKNMLDPNPYNRL-----TLEEVLENPWIKN 343
             AK+L++ +L  +P  RL       +E+ E+ + + 
Sbjct: 291 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK 327

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score =  165 bits (419), Expect = 2e-45
 Identities = 89/334 (26%), Positives = 156/334 (46%), Gaps = 29/334 (8%)

Query: 27  TASTNNKRNDASSKKPSPSPK-----HESVSKHASNVDKKSISFQLRSVVSNPAEGNILD 81
              T  +R + ++   + +          +   + +    S + ++   ++ P     ++
Sbjct: 89  HVETPEEREEWTTAIQTVADGLKKQAAAEMDFRSGSPSDNSGAEEMEVSLAKPKHRVTMN 148

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
           ++ + K LG+G FG      E  TG  YA K + KE +  + ++     E  ++++  +H
Sbjct: 149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RH 207

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH-E 200
           P +   K +++  D +  VME   GGELF  +  +  ++E  A   G  I+  +   H E
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 267

Query: 201 NGVMHRDLKPENFLF-ADGSENSQLKAIDFGLS-IFFKPGEQ---FCEIVGSPYYMAPEV 255
             V++RDLK EN +   DG     +K  DFGL     K G     FC   G+P Y+APEV
Sbjct: 268 KNVVYRDLKLENLMLDKDG----HIKITDFGLCKEGIKDGATMKTFC---GTPEYLAPEV 320

Query: 256 LRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           L  N YG  +D W  GV++Y ++CG  PF+ +  E +   I+  +I F R     +  EA
Sbjct: 321 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEA 376

Query: 315 KELVKNMLDPNPYNRL-----TLEEVLENPWIKN 343
           K L+  +L  +P  RL       +E++++ +   
Sbjct: 377 KSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAG 410

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  166 bits (423), Expect = 4e-45
 Identities = 84/355 (23%), Positives = 151/355 (42%), Gaps = 36/355 (10%)

Query: 12  AFFSKKSQAIGNIDNTASTNNKRNDASSKKPSPSPK--HESVSKHASNVDKKSISFQLRS 69
           A+   ++Q   +  +  +    R  A      P  +     + +        S+ F  R 
Sbjct: 113 AYLEPQAQLFCSFLDAETVARARAGAGDGLFQPLLRAVLAHLGQAPFQEFLDSLYFL-RF 171

Query: 70  VVSNPAEGNILDKYTFG--KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD 127
           +     E   + +  F   + LGRG FG    C    TG+ YACKK+ K++LK       
Sbjct: 172 LQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQG 231

Query: 128 VRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH----YTERA 183
              E +I+  +     IV+   A+E K  + LVM +  GG++   I N       + E  
Sbjct: 232 AMVEKKILAKV-HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR 290

Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLSIFFKPGEQ-- 240
           A      I+  ++  H+  +++RDLKPEN L   DG     ++  D GL++  K G+   
Sbjct: 291 AIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG----NVRISDLGLAVELKAGQTKT 346

Query: 241 --FCEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETE----EGIAH 293
             +    G+P +MAPE+L    Y   +D ++ GV +Y ++    PF A  E    + +  
Sbjct: 347 KGYA---GTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ 403

Query: 294 AIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRL-----TLEEVLENPWIKN 343
            ++   + +      K S  +K+  + +L  +P  RL     + + +  +P  ++
Sbjct: 404 RVLEQAVTYPD----KFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRD 454

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153

 Score =  155 bits (394), Expect = 6e-45
 Identities = 42/151 (27%), Positives = 77/151 (50%), Gaps = 5/151 (3%)

Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
             +L  +++ ++++ F   D DK+G +   +L + +  +G   ++ ++  L +  +++  
Sbjct: 2   DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLG 61

Query: 438 GLLSCDEFVTMSVHLKRIGNDDILSQ-----AFRFFDKNQSGFIEVDELKEVLLEDNAGP 492
           G +  D+FV +          D++       AFR FD N  G I   EL+E +       
Sbjct: 62  GHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQ 121

Query: 493 NGDQTIRDILRDVDLDRDGRISFEEFKAMMT 523
            G + I +I+RDVDL+ DGR+ FEEF  MM+
Sbjct: 122 VGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153

 Score = 57.2 bits (139), Expect = 5e-10
 Identities = 17/75 (22%), Positives = 45/75 (60%), Gaps = 1/75 (1%)

Query: 375 RVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGL-NMIGQKVSDPDVKMLMEAAD 433
           +++A+      + +++  F   DT+ +G+++  EL++ +  ++G +V   D++ ++   D
Sbjct: 76  KLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVD 135

Query: 434 VDGNGLLSCDEFVTM 448
           ++G+G +  +EFV M
Sbjct: 136 LNGDGRVDFEEFVRM 150

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score =  162 bits (412), Expect = 7e-45
 Identities = 70/277 (25%), Positives = 121/277 (43%), Gaps = 27/277 (9%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
              + F K +G+G FG             YA K + K+ +  + +   +  E  ++    
Sbjct: 37  PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV 96

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA---AAVGKTILRIVK 196
           KHP +V    +++  D +Y V++   GGELF  +  +  + E  A   AA    I   + 
Sbjct: 97  KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAA---EIASALG 153

Query: 197 VCHENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLS-IFFKPGEQ---FCEIVGSPYYM 251
             H   +++RDLKPEN L  + G     +   DFGL     +       FC   G+P Y+
Sbjct: 154 YLHSLNIVYRDLKPENILLDSQG----HIVLTDFGLCKENIEHNSTTSTFC---GTPEYL 206

Query: 252 APEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APEVL +  Y   +D W  G ++Y +L G+PPF++     +   I+   +       P +
Sbjct: 207 APEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL---K-PNI 262

Query: 311 SKEAKELVKNMLDPNPYNRL----TLEEVLENPWIKN 343
           +  A+ L++ +L  +   RL       E+  + +   
Sbjct: 263 TNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSL 299

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169

 Score =  155 bits (394), Expect = 9e-45
 Identities = 39/154 (25%), Positives = 82/154 (53%), Gaps = 4/154 (2%)

Query: 375 RVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADV 434
           +     L ++Q  +I++ F + DTD +G +  +ELK  +  +G +    ++K ++   D 
Sbjct: 16  KKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDK 75

Query: 435 DGNGLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN 493
           DG+G +  +EF+T M+  +    + + + +AFR FD + SG I + +L+ V      G N
Sbjct: 76  DGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVA--KELGEN 133

Query: 494 -GDQTIRDILRDVDLDRDGRISFEEFKAMMTSGA 526
             ++ +++++ + D + D  I  +EF  +M   +
Sbjct: 134 LTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTS 167

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score =  161 bits (409), Expect = 9e-45
 Identities = 78/326 (23%), Positives = 136/326 (41%), Gaps = 27/326 (8%)

Query: 29  STNNKRNDASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKE 88
           S  +  +      P+    +   +        ++ S +   V     + +    ++  +E
Sbjct: 2   SYYHHHHHHDYDIPTTENLYFQGAMDPMPAGGRAGSLKDPDVAELFFKDDPEKLFSDLRE 61

Query: 89  LGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYK 148
           +G G FG  +   ++   E  A KK++    ++     D+ +EV  ++ L +HPN + Y+
Sbjct: 62  IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYR 120

Query: 149 EAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDL 208
             Y  +   +LVME C G       V+K    E   AAV    L+ +   H + ++HRD+
Sbjct: 121 GCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDV 180

Query: 209 KPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL----RRNYGPEI 264
           K  N L    SE   +K  DFG +    P   F   VG+PY+MAPEV+       Y  ++
Sbjct: 181 KAGNILL---SEPGLVKLGDFGSASIMAPANSF---VGTPYWMAPEVILAMDEGQYDGKV 234

Query: 265 DVWSAGVIIYILLCGVPPFWAETEEGIAHAI-------IRGKIDFERDPWPKVSKEAKEL 317
           DVWS G+    L    PP +        +A+              +   W   S+  +  
Sbjct: 235 DVWSLGITCIELAERKPPLFNM------NAMSALYHIAQNESPALQSGHW---SEYFRNF 285

Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKN 343
           V + L   P +R T E +L++ ++  
Sbjct: 286 VDSCLQKIPQDRPTSEVLLKHRFVLR 311

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161

 Score =  155 bits (393), Expect = 1e-44
 Identities = 46/165 (27%), Positives = 86/165 (52%), Gaps = 12/165 (7%)

Query: 366 MNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTD-KNGDLTFEELKDGLNMIGQKVSDPD 424
           M+   K       + L ++Q  + K  F +     ++G ++ +EL   + M+GQ  +  +
Sbjct: 1   MDDIYK----AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEE 56

Query: 425 VKMLMEAADVDGNGLLSCDEFVTMSVHL----KRIGNDDILSQAFRFFDKNQSGFIEVDE 480
           ++ +++  D DG+G +  DEF+ M V       +  +++ LS  FR FDKN  G+I+++E
Sbjct: 57  LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEE 116

Query: 481 LKEVLLEDNAGPN-GDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           LK +L     G    +  I ++++D D + DGRI ++EF   M  
Sbjct: 117 LKIMLQA--TGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 159

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179

 Score =  155 bits (395), Expect = 1e-44
 Identities = 50/150 (33%), Positives = 94/150 (62%), Gaps = 4/150 (2%)

Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           AD L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 2   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61

Query: 438 GLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-GD 495
           G +   EF+T M+  +K   +++ + +AFR FDK+ +G+I   EL+ V+   N G    D
Sbjct: 62  GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM--TNLGEKLTD 119

Query: 496 QTIRDILRDVDLDRDGRISFEEFKAMMTSG 525
           + + +++R+ D+D DG++++EEF  MMT+ 
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVQMMTAK 149

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179

 Score = 78.3 bits (194), Expect = 5e-17
 Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 4/98 (4%)

Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSC 442
            D   +I++ F + D D NG ++  EL+  +  +G+K++D +V  ++  AD+DG+G ++ 
Sbjct: 80  TDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 139

Query: 443 DEFVTM----SVHLKRIGNDDILSQAFRFFDKNQSGFI 476
           +EFV M              +++    R   K    F 
Sbjct: 140 EEFVQMMTAKGGGGGAAARKEVIRNKIRAIGKMARVFS 177

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158

 Score =  154 bits (391), Expect = 2e-44
 Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 9/157 (5%)

Query: 378 ADNLPQDQMAQIKQMFYMMDT-DKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
              L  +Q+  ++  F   +T + +G ++ +++   L ++G + +   ++ L++  D  G
Sbjct: 4   VSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFG 63

Query: 437 NGLLSCDEFVT-----MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAG 491
           NG +  D F       +   +        L +AFR +DK  +G+I  D ++E+L E    
Sbjct: 64  NGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAE--LD 121

Query: 492 PN-GDQTIRDILRDVDLDRDGRISFEEFKAMMTSGAD 527
                + +  ++ ++D D  G + FEEF  +MT G +
Sbjct: 122 ETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTGGDE 158

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158

 Score = 58.0 bits (141), Expect = 3e-10
 Identities = 14/74 (18%), Positives = 41/74 (55%)

Query: 375 RVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADV 434
            +  +  P+    ++++ F + D + NG ++ + +++ L  + + +S  D+  +++  D 
Sbjct: 79  FLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDA 138

Query: 435 DGNGLLSCDEFVTM 448
           DG+G +  +EF+ +
Sbjct: 139 DGSGTVDFEEFMGV 152

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score =  158 bits (403), Expect = 4e-44
 Identities = 83/305 (27%), Positives = 134/305 (43%), Gaps = 37/305 (12%)

Query: 58  VDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEI---ETGETYACKKI 114
           ++       +   V    E     ++   K LG+G FG      +I   +  + YA K +
Sbjct: 1   MEGSIKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL 60

Query: 115 AKEKLKTEIDIDDVRREVEIM--RH---LPKHPNIVTYKEAYEDKDAIYLVMELCEGGEL 169
            K  LK       VR  V     R       HP IV    A++ +  +YL+++   GG+L
Sbjct: 61  KKATLK-------VRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL 113

Query: 170 FDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLF-ADGSENSQLKAID 228
           F R+  +  +TE         +   +   H  G+++RDLKPEN L   +G     +K  D
Sbjct: 114 FTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG----HIKLTD 169

Query: 229 FGLS-IFFKPGEQ---FCEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPF 283
           FGLS       ++   FC   G+  YMAPEV+ R  +    D WS GV+++ +L G  PF
Sbjct: 170 FGLSKESIDHEKKAYSFC---GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226

Query: 284 WAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRL-----TLEEVLEN 338
             +  +     I++ K+     P   +S EA+ L++ +   NP NRL      +EE+  +
Sbjct: 227 QGKDRKETMTMILKAKLGM---P-QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282

Query: 339 PWIKN 343
            +   
Sbjct: 283 SFFST 287

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score =  158 bits (402), Expect = 5e-44
 Identities = 83/279 (29%), Positives = 138/279 (49%), Gaps = 27/279 (9%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEI-DIDDVRREVEIM 135
            + +   + LG+G +G   Q  ++    TG+ +A K + K  +     D    + E  I+
Sbjct: 16  PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
             + KHP IV    A++    +YL++E   GGELF ++  +G + E  A      I   +
Sbjct: 76  EEV-KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMAL 134

Query: 196 KVCHENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLS-IFFKPGEQ---FCEIVGSPYY 250
              H+ G+++RDLKPEN +    G     +K  DFGL       G     FC   G+  Y
Sbjct: 135 GHLHQKGIIYRDLKPENIMLNHQG----HVKLTDFGLCKESIHDGTVTHTFC---GTIEY 187

Query: 251 MAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
           MAPE+L R+ +   +D WS G ++Y +L G PPF  E  +     I++ K++    P P 
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNL---P-PY 243

Query: 310 VSKEAKELVKNMLDPNPYNRL-----TLEEVLENPWIKN 343
           +++EA++L+K +L  N  +RL        EV  +P+ ++
Sbjct: 244 LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRH 282

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143

 Score =  152 bits (386), Expect = 7e-44
 Identities = 37/143 (25%), Positives = 76/143 (53%), Gaps = 4/143 (2%)

Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSC 442
           ++Q  +I++ F + D D  G +  +ELK  +  +G +    ++K ++   D +G G ++ 
Sbjct: 2   EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 61

Query: 443 DEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-GDQTIRD 500
            +F+T M+  +      + + +AF+ FD +++G I    LK V      G N  D+ +++
Sbjct: 62  GDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVA--KELGENLTDEELQE 119

Query: 501 ILRDVDLDRDGRISFEEFKAMMT 523
           ++ + D D DG +S +EF  +M 
Sbjct: 120 MIDEADRDGDGEVSEQEFLRIMK 142

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  158 bits (401), Expect = 7e-44
 Identities = 66/318 (20%), Positives = 117/318 (36%), Gaps = 44/318 (13%)

Query: 47  KHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETG 106
           K   +       +K     +  + + +P    I+  +               + ++ E  
Sbjct: 37  KRIRLPNRELAREKVMREVKALAKLEHP---GIVRYFNAW-------LETPPEKWQEEMD 86

Query: 107 ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG 166
           E +   +     L +   +D    ++  M       N V   +    K  +Y+ M+LC  
Sbjct: 87  EIWLKDESTDWPLSSPSPMDAPSVKIRRMDPF-STKNTVGQLQPSSPKVYLYIQMQLCRK 145

Query: 167 GELFDRIVNKGHYTERAAAAVGKTILRI-------VKVCHENGVMHRDLKPENFLFADGS 219
             L D +  +    +R         L I       V+  H  G+MHRDLKP N  F   +
Sbjct: 146 ENLKDWMNRRCSLEDREH----GVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFF---T 198

Query: 220 ENSQLKAIDFGLS-------------IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEID 265
            +  +K  DFGL                          VG+  YM+PE +   NY  ++D
Sbjct: 199 MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVD 258

Query: 266 VWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPN 325
           ++S G+I++ LL     F  + E       +R  + F      K   +   +V++ML P+
Sbjct: 259 IFSLGLILFELLY---SFSTQMERVRIITDVR-NLKFPLLFTQK-YPQEHMMVQDMLSPS 313

Query: 326 PYNRLTLEEVLENPWIKN 343
           P  R    +++EN   +N
Sbjct: 314 PTERPEATDIIENAIFEN 331

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 52.6 bits (126), Expect = 2e-07
 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 3/85 (3%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L  +   + +GRG FG+  +         YA K+I       E+  + V REV+ +  L 
Sbjct: 5   LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLP--NRELAREKVMREVKALAKL- 61

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELC 164
           +HP IV Y  A+ +        E+ 
Sbjct: 62  EHPGIVRYFNAWLETPPEKWQEEMD 86

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score =  157 bits (399), Expect = 8e-44
 Identities = 72/285 (25%), Positives = 126/285 (44%), Gaps = 28/285 (9%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D Y   + +G G   +    +     E  A K+I  EK   +  +D++ +E++ M     
Sbjct: 15  DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK--CQTSMDELLKEIQAMSQC-H 71

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFD--------RIVNKGHYTERAAAAVGKTIL 192
           HPNIV+Y  ++  KD ++LVM+L  GG + D             G   E   A + + +L
Sbjct: 72  HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131

Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE------IVG 246
             ++  H+NG +HRD+K  N L     E+  ++  DFG+S F   G            VG
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188

Query: 247 SPYYMAPEVLRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK----- 299
           +P +MAPEV+ +   Y  + D+WS G+    L  G  P+       +    ++       
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLE 248

Query: 300 -IDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
               +++   K  K  ++++   L  +P  R T  E+L + + + 
Sbjct: 249 TGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQK 293

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  157 bits (399), Expect = 1e-43
 Identities = 79/309 (25%), Positives = 141/309 (45%), Gaps = 47/309 (15%)

Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR--REVEIMR 136
           +++KY    ++G G +G+  +C   +TG+  A KK        +  +      RE+ +++
Sbjct: 1   MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF---LESEDDPVIKKIALREIRMLK 57

Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEG--GELFDRIVNKGHYTERAAAAVGKTILRI 194
            L KHPN+V   E +  K  ++LV E C+       DR   +    E    ++    L+ 
Sbjct: 58  QL-KHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDR--YQRGVPEHLVKSITWQTLQA 114

Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAP 253
           V  CH++  +HRD+KPEN L    +++S +K  DFG + +   P + + + V + +Y +P
Sbjct: 115 VNFCHKHNCIHRDVKPENILI---TKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSP 171

Query: 254 EVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR--GKIDFERDPWPK 309
           E+L     YGP +DVW+ G +   LL GVP +  +++    + I +  G +   R     
Sbjct: 172 ELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLI-PRH-QQV 229

Query: 310 VSK---------------------------EAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            S                             A  L+K  L  +P  RLT E++L +P+ +
Sbjct: 230 FSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFE 289

Query: 343 NDNHAPNVS 351
           N     +++
Sbjct: 290 NIREIEDLA 298

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  156 bits (397), Expect = 1e-43
 Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 17/287 (5%)

Query: 66  QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI 125
            ++++ ++P E      +T  +++G+G FG   +  +  T +  A K I  E+   E +I
Sbjct: 12  GMQNLKADPEE-----LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEI 64

Query: 126 DDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAA 185
           +D+++E+ ++      P +  Y  +Y     ++++ME   GG   D ++  G   E   A
Sbjct: 65  EDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIA 122

Query: 186 AVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEI 244
            + + IL+ +   H    +HRD+K  N L    SE+ ++K  DFG++        +    
Sbjct: 123 TILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTF 179

Query: 245 VGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE 303
           VG+P++MAPEV++++ Y  + D+WS G+    L  G PP        +   I +      
Sbjct: 180 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTL 239

Query: 304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNV 350
              +   SK  KE V+  L+  P  R T +E+L++ +I  +    + 
Sbjct: 240 EGNY---SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTSY 283

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  159 bits (405), Expect = 1e-43
 Identities = 89/362 (24%), Positives = 145/362 (40%), Gaps = 58/362 (16%)

Query: 34  RNDASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGN---ILDKYTFGKELG 90
           R   +S   S  P  +  +  +  V +     ++ +VV+ P +G        YT  K +G
Sbjct: 4   RPRTTSFAESCKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIG 63

Query: 91  RGEFGITHQCFEIETGETYACKKI---AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTY 147
            G FG+ +Q    ++GE  A KK+    + K           RE++IMR L  H NIV  
Sbjct: 64  NGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN----------RELQIMRKL-DHCNIVRL 112

Query: 148 KEAY------EDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKT----ILRIVKV 197
           +  +      +D+  + LV++      ++    +     +       K     + R +  
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171

Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL- 256
            H  G+ HRD+KP+N L     + + LK  DFG +     GE     + S YY APE++ 
Sbjct: 172 IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF 229

Query: 257 -RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR------------------ 297
              +Y   IDVWSAG ++  LL G P F  ++       II+                  
Sbjct: 230 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 289

Query: 298 -------GKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNV 350
                      + +   P+   EA  L   +L+  P  RLT  E   + +  ++   PNV
Sbjct: 290 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDPNV 348

Query: 351 SL 352
            L
Sbjct: 349 KL 350

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148

 Score =  151 bits (384), Expect = 1e-43
 Identities = 48/149 (32%), Positives = 90/149 (60%), Gaps = 4/149 (2%)

Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           A+ L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGN
Sbjct: 1   AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60

Query: 438 GLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-GD 495
           G +   EF++ M+  +K   +++ L +AF+ FD++ +G I   EL+ V+   N G    D
Sbjct: 61  GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVM--TNLGEKLTD 118

Query: 496 QTIRDILRDVDLDRDGRISFEEFKAMMTS 524
             + +++R+ D+D DG I++EEF  MM S
Sbjct: 119 DEVDEMIREADIDGDGHINYEEFVRMMVS 147

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142

 Score =  148 bits (377), Expect = 1e-42
 Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 5/143 (3%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
           DQ+++ K+ F + D+++ G +T E L+  L   G +V       +   AD  GNG +   
Sbjct: 3   DQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFP 62

Query: 444 EFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-GDQTIRDI 501
           EF++ M   +K+  ++DIL QAFR FD   +G+I    L++ LL    G         + 
Sbjct: 63  EFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLN--LGDRLKPHEFAEF 120

Query: 502 LRDVDLDRDGRISFEEFKAMMTS 524
           L   + +  G+I ++ F   M +
Sbjct: 121 LGITETE-KGQIRYDNFINTMFT 142

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147

 Score =  148 bits (377), Expect = 1e-42
 Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 5/148 (3%)

Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           + NL ++Q+A+ K+ F + D D +G ++  EL   +  +G   S+ +V  LM   DVDGN
Sbjct: 2   SQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGN 61

Query: 438 GLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-GD 495
             +   EF+  MS  LK   ++  L +AF+ FDKN  G I   ELK VL   + G    D
Sbjct: 62  HAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVL--TSIGEKLTD 119

Query: 496 QTIRDILRDVDLDRDGRISFEEFKAMMT 523
             + ++LR+V  D  G I+ ++F A+++
Sbjct: 120 AEVDEMLREVS-DGSGEINIKQFAALLS 146

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162

 Score =  149 bits (378), Expect = 2e-42
 Identities = 51/149 (34%), Positives = 86/149 (57%), Gaps = 7/149 (4%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L ++ +A+ K  F M D D  GD++ +EL   + M+GQ  +  ++  ++E  D DG+G +
Sbjct: 14  LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73

Query: 441 SCDEFVTMSVHL----KRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-GD 495
             +EF+ M V       +  +++ L+  FR FDKN  GFI+++EL E+L     G +  +
Sbjct: 74  DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEIL--RATGEHVTE 131

Query: 496 QTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           + I D+++D D + DGRI F+EF  MM  
Sbjct: 132 EDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162

 Score = 61.1 bits (149), Expect = 3e-11
 Identities = 19/74 (25%), Positives = 40/74 (54%)

Query: 375 RVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADV 434
           R + ++       ++   F + D + +G +  EEL + L   G+ V++ D++ LM+ +D 
Sbjct: 84  RQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDK 143

Query: 435 DGNGLLSCDEFVTM 448
           + +G +  DEF+ M
Sbjct: 144 NNDGRIDFDEFLKM 157

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  153 bits (388), Expect = 3e-42
 Identities = 71/303 (23%), Positives = 133/303 (43%), Gaps = 41/303 (13%)

Query: 56  SNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIA 115
            N  ++ +  +L             + +   ++LG G +G  ++    ETG+  A K++ 
Sbjct: 8   RNPPRRQLK-KLDEDSLT---KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV- 62

Query: 116 KEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-V 174
                 E D+ ++ +E+ IM+     P++V Y  +Y     +++VME C  G + D I +
Sbjct: 63  ----PVESDLQEIIKEISIMQQC-DSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRL 117

Query: 175 NKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF 234
                TE   A + ++ L+ ++  H    +HRD+K  N L    +     K  DFG++  
Sbjct: 118 RNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL---NTEGHAKLADFGVA-- 172

Query: 235 FKPGEQFCEI-------VGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAE 286
                Q  +        +G+P++MAPEV++   Y    D+WS G+    +  G PP+   
Sbjct: 173 ----GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI 228

Query: 287 TEEGIAHAIIRGKIDFERDPWP------KVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
                 H  +R       +P P        S    + VK  L  +P  R T  ++L++P+
Sbjct: 229 ------HP-MRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPF 281

Query: 341 IKN 343
           +++
Sbjct: 282 VRS 284

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  151 bits (383), Expect = 1e-41
 Identities = 79/301 (26%), Positives = 132/301 (43%), Gaps = 39/301 (12%)

Query: 60  KKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL 119
           +KS  ++      +P E      +    ELG G FG  ++    ETG   A K I   + 
Sbjct: 3   RKSREYEHVRRDLDPNE-----VWEIVGELGDGAFGKVYKAKNKETGALAAAKVI---ET 54

Query: 120 KTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGH 178
           K+E +++D   E+EI+     HP IV    AY     +++++E C GG +   +      
Sbjct: 55  KSEEELEDYIVEIEILATC-DHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG 113

Query: 179 YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG 238
            TE     V + +L  +   H   ++HRDLK  N L    +    ++  DFG+S      
Sbjct: 114 LTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM---TLEGDIRLADFGVSAKNLKT 170

Query: 239 EQ----FCEIVGSPYYMAPEVLRRN------YGPEIDVWSAGVIIYILLCGVPPFWAETE 288
            Q    F   +G+PY+MAPEV+         Y  + D+WS G+ +  +    PP      
Sbjct: 171 LQKRDSF---IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL-- 225

Query: 289 EGIAHAIIRGKIDFERDPWP------KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
               +  +R  +   +   P      K S E ++ +K  LD NP  R +  ++LE+P++ 
Sbjct: 226 ----NP-MRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVS 280

Query: 343 N 343
           +
Sbjct: 281 S 281

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  151 bits (385), Expect = 1e-41
 Identities = 77/328 (23%), Positives = 137/328 (41%), Gaps = 53/328 (16%)

Query: 52  SKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYAC 111
             H+S VD  + +   +S+          +KY     +G G +G+  +C   +TG   A 
Sbjct: 6   HHHSSGVDLGTENLYFQSM----------EKYENLGLVGEGSYGMVMKCRNKDTGRIVAI 55

Query: 112 KKIAKEKLKTEIDIDDVR--REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG--G 167
           KK        +  +      RE+++++ L +H N+V   E  + K   YLV E  +    
Sbjct: 56  KKF---LESDDDKMVKKIAMREIKLLKQL-RHENLVNLLEVCKKKKRWYLVFEFVDHTIL 111

Query: 168 ELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI 227
           +  +          +        I+  +  CH + ++HRD+KPEN L    S++  +K  
Sbjct: 112 DDLEL--FPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILV---SQSGVVKLC 166

Query: 228 DFGLS-IFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFW 284
           DFG +     PGE + + V + +Y APE+L     YG  +DVW+ G ++  +  G P F 
Sbjct: 167 DFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFP 226

Query: 285 AETEEGIAHAIIR-------------------GKIDF----ERDPW----PKVSKEAKEL 317
            +++    + I+                      +      ER+P     PK+S+   +L
Sbjct: 227 GDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDL 286

Query: 318 VKNMLDPNPYNRLTLEEVLENPWIKNDN 345
            K  L  +P  R    E+L + + + D 
Sbjct: 287 AKKCLHIDPDKRPFCAELLHHDFFQMDG 314

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  150 bits (380), Expect = 7e-41
 Identities = 71/283 (25%), Positives = 140/283 (49%), Gaps = 34/283 (12%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
             +   + +G G +G  ++   ++TG+  A K +    +  + + +++++E+ +++    
Sbjct: 24  GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM---DVTGD-EEEEIKQEINMLKKYSH 79

Query: 141 HPNIVTYKEAY------EDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTIL 192
           H NI TY  A+         D ++LVME C  G + D  +        E   A + + IL
Sbjct: 80  HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREIL 139

Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI-FFKPGEQFCEIVGSPYYM 251
           R +   H++ V+HRD+K +N L    +EN+++K +DFG+S    +   +    +G+PY+M
Sbjct: 140 RGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWM 196

Query: 252 APEVLRRN------YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD 305
           APEV+  +      Y  + D+WS G+    +  G PP          H  +R      R+
Sbjct: 197 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM------HP-MRALFLIPRN 249

Query: 306 PWPKV-----SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
           P P++     SK+ +  +++ L  N   R   E+++++P+I++
Sbjct: 250 PAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  150 bits (380), Expect = 2e-40
 Identities = 59/357 (16%), Positives = 114/357 (31%), Gaps = 67/357 (18%)

Query: 53  KHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGE--FGITHQCFEIETGETYA 110
            H  +   +++ FQ  S             Y     +G+G       +      TGE   
Sbjct: 2   AHHHHHHMENLYFQGMSSFLPEG-----GCYELLTVIGKGFEDLMTVNLARYKPTGEYVT 56

Query: 111 CKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELF 170
            ++I  E    E  +  ++ E+ + +    HPNIV Y+  +   + +++V      G   
Sbjct: 57  VRRINLEACSNE-MVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVTSFMAYGSAK 114

Query: 171 D--RIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID 228
           D           E A A + + +L+ +   H  G +HR +K  + L    S + ++    
Sbjct: 115 DLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI---SVDGKVYLSG 171

Query: 229 FGLSIFF--------KPGEQFCEIVGSPYYMAPEVLRRN---YGPEIDVWSAGVIIYILL 277
              ++             +     V    +++PEVL++N   Y  + D++S G+    L 
Sbjct: 172 LRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELA 231

Query: 278 CGVPPF-----------------------------------------WAETEEGIAHAII 296
            G  PF                                            ++        
Sbjct: 232 NGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPR 291

Query: 297 RGKIDFERDPWPKV-SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSL 352
               D    P+ +  S      V+  L  NP  R +   +L + + K      + +L
Sbjct: 292 PSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEAL 348

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195

 Score =  143 bits (363), Expect = 4e-40
 Identities = 33/176 (18%), Positives = 59/176 (33%), Gaps = 24/176 (13%)

Query: 370 KKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDG-----LNMIGQKVSDPD 424
            K  +++  D      + + K MF  +D + NG +T +E+           +        
Sbjct: 3   SKYAVKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTK 62

Query: 425 VKMLMEAADVDGNGLLSC-----DEFVT-----MSVHLKRIGNDD------ILSQAFRFF 468
              +   A   G G+         +F+       +  LK+   ++           F  F
Sbjct: 63  RHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIF 122

Query: 469 DKNQSGFIEVDELKEVLLEDNAGPN-GDQTIRDILRDVDLDRDGRISFEEFKAMMT 523
           DK+ SG I +DE K       +G +   +      R  DLD  G +  +E      
Sbjct: 123 DKDGSGTITLDEWKAYG--KISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHL 176

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195

 Score = 62.8 bits (153), Expect = 2e-11
 Identities = 23/96 (23%), Positives = 33/96 (34%), Gaps = 2/96 (2%)

Query: 364 SIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDP 423
               +     L+  A N P         +F + D D +G +T +E K    + G   S  
Sbjct: 90  DGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQE 149

Query: 424 DVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDD 459
           D +      D+D  G L  DE      HL      D
Sbjct: 150 DCEATFRHCDLDNAGDLDVDEMTRQ--HLGFWYTLD 183

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 16/75 (21%), Positives = 25/75 (33%), Gaps = 9/75 (12%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLED---NAGPNGDQT-IRDILRDVDLDRDG----- 511
               F F D N +G I +DE+     +D         +QT    +  +      G     
Sbjct: 22  HKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGK 81

Query: 512 RISFEEFKAMMTSGA 526
            I+F +F       A
Sbjct: 82  EIAFPQFLDGWKQLA 96

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  149 bits (377), Expect = 6e-40
 Identities = 83/343 (24%), Positives = 135/343 (39%), Gaps = 50/343 (14%)

Query: 47  KHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETG 106
            +  ++    N                         YT  K +G G FG+  Q   +E+ 
Sbjct: 6   SNAPLNGVKLNPLDDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESD 65

Query: 107 ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAY------EDKDAIYLV 160
           E  A KK+ ++K           RE++IMR + KHPN+V  K  +      +D+  + LV
Sbjct: 66  E-VAIKKVLQDK-------RFKNRELQIMRIV-KHPNVVDLKAFFYSNGDKKDEVFLNLV 116

Query: 161 MELCEGGELFDRIVNKGHYTERAAAAVGKT----ILRIVKVCHENGVMHRDLKPENFLFA 216
           +E      ++    +     +     + K     +LR +   H  G+ HRD+KP+N L  
Sbjct: 117 LEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLL-L 174

Query: 217 DGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIY 274
           D   +  LK IDFG +     GE     + S YY APE++    NY   ID+WS G ++ 
Sbjct: 175 D-PPSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMA 233

Query: 275 ILLCGVPPFWAETEEGIAHAIIR-------------------------GKIDFERDPWPK 309
            L+ G P F  E+       II+                             F +   P+
Sbjct: 234 ELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPR 293

Query: 310 VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSL 352
              +A +L+  +L+  P  RLT  E L +P+  ++       +
Sbjct: 294 TPPDAIDLISRLLEYTPSARLTAIEALCHPFF-DELRTGEARM 335

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155

 Score =  141 bits (358), Expect = 7e-40
 Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 9/148 (6%)

Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSC 442
            D++ ++ + F  +D D +G L+ EE       + +   +P V+ +++  D DGNG +  
Sbjct: 2   ADEIKRLGKRFKKLDLDNSGSLSVEEFMS----LPELQQNPLVQRVIDIFDTDGNGEVDF 57

Query: 443 DEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGD----QT 497
            EF+  +S    +   +  L  AFR +D ++ G+I   EL +VL         D    Q 
Sbjct: 58  KEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQI 117

Query: 498 IRDILRDVDLDRDGRISFEEFKAMMTSG 525
           +   + + D D DGRISFEEF A++   
Sbjct: 118 VDKTIINADKDGDGRISFEEFCAVVGGL 145

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  147 bits (372), Expect = 1e-39
 Identities = 78/305 (25%), Positives = 129/305 (42%), Gaps = 44/305 (14%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK-----TEIDIDDVRREVEI 134
           +D+Y    +LG G +G  ++  +  T ET A K+I  E  +     T I      REV +
Sbjct: 33  IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAI------REVSL 86

Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           ++ L +H NI+  K        ++L+ E  E  +L   +      + R   +    ++  
Sbjct: 87  LKEL-QHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLING 144

Query: 195 VKVCHENGVMHRDLKPENFLF--ADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYM 251
           V  CH    +HRDLKP+N L   +D SE   LK  DFGL+  F  P  QF   + + +Y 
Sbjct: 145 VNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYR 204

Query: 252 APEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR------------ 297
            PE+L   R+Y   +D+WS   I   +L   P F  ++E      I              
Sbjct: 205 PPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPG 264

Query: 298 --------------GKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                              +R     +  E  +L+  ML+ +P  R++ +  LE+P+  +
Sbjct: 265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSH 324

Query: 344 DNHAP 348
           ++  P
Sbjct: 325 NDFDP 329

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  145 bits (368), Expect = 3e-39
 Identities = 71/302 (23%), Positives = 124/302 (41%), Gaps = 43/302 (14%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE--IDIDDVRREVEIMRH 137
           ++ Y    +LG G +   ++     T    A K+I   +L+ E       +R EV +++ 
Sbjct: 1   METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEI---RLEHEEGAPCTAIR-EVSLLKD 56

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEG--GELFDRIVNKGHYTERAAAAVGKTILRIV 195
           L KH NIVT  +    + ++ LV E  +    +  D                   +LR +
Sbjct: 57  L-KHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDD--CGNIINMHNVKLFLFQLLRGL 113

Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-KPGEQFCEIVGSPYYMAPE 254
             CH   V+HRDLKP+N L    +E  +LK  DFGL+     P + +   V + +Y  P+
Sbjct: 114 AYCHRQKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPD 170

Query: 255 VL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR--------------- 297
           +L    +Y  +ID+W  G I Y +  G P F   T E   H I R               
Sbjct: 171 ILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILS 230

Query: 298 ----GKIDFERDP-------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH 346
                  ++ +          P++  +  +L+  +L     NR++ E+ +++P+  +   
Sbjct: 231 NEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE 290

Query: 347 AP 348
             
Sbjct: 291 RI 292

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191

 Score =  140 bits (356), Expect = 5e-39
 Identities = 32/157 (20%), Positives = 68/157 (43%), Gaps = 9/157 (5%)

Query: 380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGL 439
               +   ++ + F  +DTD +G ++  EL   L+  G   S    + L+   D + +G 
Sbjct: 20  ARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGE 79

Query: 440 LSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-GDQTI 498
           ++ DEF  +   +        + + FR  D +  G ++ +E++  LL   +G    +QT 
Sbjct: 80  ITFDEFKDLHHFILS------MREGFRKRDSSGDGRLDSNEVRAALLS--SGYQVSEQTF 131

Query: 499 RDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQY 535
           + ++R  D  R G + F+++  +       +     Y
Sbjct: 132 QALMRKFDRQRRGSLGFDDYVELSIFVCRVRNVFAFY 168

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191

 Score = 83.5 bits (207), Expect = 1e-18
 Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 6/94 (6%)

Query: 386 MAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEF 445
           +  +++ F   D+  +G L   E++  L   G +VS+   + LM   D    G L  D++
Sbjct: 92  ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDY 151

Query: 446 VTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVD 479
           V +S+ + R      +   F F+D+ ++G +   
Sbjct: 152 VELSIFVCR------VRNVFAFYDRERTGQVTFT 179

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191

 Score = 77.3 bits (191), Expect = 1e-16
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 1/82 (1%)

Query: 456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISF 515
            ++  L + FR  D + SG I V EL   L       +   T   +L   D +  G I+F
Sbjct: 24  NDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFS-LATTEKLLHMYDKNHSGEITF 82

Query: 516 EEFKAMMTSGADWKMASRQYSR 537
           +EFK +       +   R+   
Sbjct: 83  DEFKDLHHFILSMREGFRKRDS 104

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  144 bits (365), Expect = 7e-39
 Identities = 63/302 (20%), Positives = 113/302 (37%), Gaps = 27/302 (8%)

Query: 55  ASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKI 114
           +S    K   +         AE   ++      E+G G  G   +    +TG   A K++
Sbjct: 2   SSGSSGKQTGYLTIGGQRYQAE---INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQM 58

Query: 115 AKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIV 174
            +     + +   +  +++++      P IV     +     +++ MEL        +  
Sbjct: 59  RRSG--NKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKR 116

Query: 175 NKGHYTERAAAAVGKTILRIVKVCH-ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI 233
            +G   ER    +   I++ +     ++GV+HRD+KP N L     E  Q+K  DFG+S 
Sbjct: 117 MQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGQIKLCDFGISG 173

Query: 234 FFKPGEQFCEIVGSPYYMAPEVLRRN------YGPEIDVWSAGVIIYILLCGVPPFWAET 287
                +      G   YMAPE +         Y    DVWS G+ +  L  G  P+    
Sbjct: 174 RLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNC- 232

Query: 288 EEGIAHAIIRGKIDFERDPWPKV------SKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
                           ++  P +      S + +  VK+ L  +   R    ++LE+ +I
Sbjct: 233 -----KTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFI 287

Query: 342 KN 343
           K 
Sbjct: 288 KR 289

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  141 bits (359), Expect = 2e-38
 Identities = 83/301 (27%), Positives = 133/301 (44%), Gaps = 48/301 (15%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK-----TEIDIDDVRREVEI 134
           ++KY   +++G G +G+ ++      GET+A KKI  EK       T I      RE+ I
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTI------REISI 53

Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG--GELFDRIVNKGHYTERAAAAVGKTIL 192
           ++ L KH NIV   +    K  + LV E  +    +L D    +G      A +    +L
Sbjct: 54  LKEL-KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDV--CEGGLESVTAKSFLLQLL 110

Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYM 251
             +  CH+  V+HRDLKP+N L    +   +LK  DFGL+  F  P  ++   + + +Y 
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEIVTLWYR 167

Query: 252 APEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR--G--------- 298
           AP+VL   + Y   ID+WS G I   ++ G P F   +E      I R  G         
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN 227

Query: 299 -------KIDFERDP-------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
                    +F              + +   +L+  ML  +P  R+T ++ LE+ + K +
Sbjct: 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

Query: 345 N 345
           N
Sbjct: 288 N 288

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156

 Score =  136 bits (346), Expect = 5e-38
 Identities = 34/159 (21%), Positives = 79/159 (49%), Gaps = 9/159 (5%)

Query: 371 KKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLME 430
            K    V   LPQ Q+ ++K+ F M+D D++G ++ E++K     +G+   D ++  +++
Sbjct: 2   DKAASGVLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK 61

Query: 431 AADVDGNGLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDN 489
               +  G L+   F++  S  L    +++ +  AF  FD+ ++  + ++ +K++L    
Sbjct: 62  ----EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLEN-- 115

Query: 490 AGPN-GDQTIRDILRDVDLDRDGRISFEEFKAMMTSGAD 527
            G N     +R   ++  ++  G+  + +F AM+    +
Sbjct: 116 MGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGSGE 153

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  141 bits (358), Expect = 1e-37
 Identities = 76/299 (25%), Positives = 124/299 (41%), Gaps = 43/299 (14%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD-----VRREVEI 134
             +Y     LG G+F   ++  +  T +  A KKI   KL    +  D       RE+++
Sbjct: 9   AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKI---KLGHRSEAKDGINRTALREIKL 65

Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG--GELFDRIVNKGHYTERAAAAVGKTIL 192
           ++ L  HPNI+   +A+  K  I LV +  E     +     N    T     A     L
Sbjct: 66  LQEL-SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKD--NSLVLTPSHIKAYMLMTL 122

Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYM 251
           + ++  H++ ++HRDLKP N L     EN  LK  DFGL+  F  P   +   V + +Y 
Sbjct: 123 QGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYR 179

Query: 252 APEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR------------ 297
           APE+L   R YG  +D+W+ G I+  LL  VP    +++      I              
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPD 239

Query: 298 -----GKIDFERDP-------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
                  + F+  P       +     +  +L++ +   NP  R+T  + L+  +  N 
Sbjct: 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR 298

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  140 bits (355), Expect = 2e-37
 Identities = 63/299 (21%), Positives = 111/299 (37%), Gaps = 26/299 (8%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
            +      E+GRG +G  ++     +G+  A K+I       E +   +  +++++    
Sbjct: 21  AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV--DEKEQKQLLMDLDVVMRSS 78

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK------GHYTERAAAAVGKTILR 193
             P IV +  A   +   ++ MEL      FD+              E     +    ++
Sbjct: 79  DCPYIVQFYGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVK 136

Query: 194 IVKVCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
            +    EN  ++HRD+KP N L      +  +K  DFG+S             G   YMA
Sbjct: 137 ALNHLKENLKIIHRDIKPSNILL---DRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMA 193

Query: 253 PEVL-----RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIA---HAIIRGKI-DFE 303
           PE +     R+ Y    DVWS G+ +Y L  G  P+       +      +++G      
Sbjct: 194 PERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY--PKWNSVFDQLTQVVKGDPPQLS 251

Query: 304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQ 362
                + S      V   L  +   R   +E+L++P+I        V +   V   + Q
Sbjct: 252 NSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERA-VEVACYVCKILDQ 309

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  138 bits (351), Expect = 6e-37
 Identities = 74/308 (24%), Positives = 121/308 (39%), Gaps = 48/308 (15%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE--IDIDDVRREVEIMRHL 138
            ++   ++LG G +   ++     TG   A K++   KL +E       +R E+ +M+ L
Sbjct: 5   SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEV---KLDSEEGTPSTAIR-EISLMKEL 60

Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGG-----ELFDRIVNKGHYTERAAAAVGKTILR 193
            KH NIV   +    ++ + LV E  +       +                      +L+
Sbjct: 61  -KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119

Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMA 252
            +  CHEN ++HRDLKP+N L    ++  QLK  DFGL+  F  P   F   V + +Y A
Sbjct: 120 GLAFCHENKILHRDLKPQNLLI---NKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRA 176

Query: 253 PEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR--G---------- 298
           P+VL   R Y   ID+WS G I+  ++ G P F    +E     I    G          
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV 236

Query: 299 ------------------KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
                             +   +      +     + +  +L  NP  RL+ ++ L +PW
Sbjct: 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296

Query: 341 IKNDNHAP 348
                H  
Sbjct: 297 FAEYYHHA 304

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  138 bits (349), Expect = 7e-37
 Identities = 75/303 (24%), Positives = 126/303 (41%), Gaps = 50/303 (16%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK-----TEIDIDDVRREVEI 134
           + KY   +++G G +G   +    ET E  A K++  +        + +      RE+ +
Sbjct: 1   MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSAL------REICL 54

Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG--GELFDRIVNKGHYTERAAAAVGKTIL 192
           ++ L KH NIV   +       + LV E C+    + FD     G        +    +L
Sbjct: 55  LKEL-KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLL 111

Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYM 251
           + +  CH   V+HRDLKP+N L    + N +LK  +FGL+  F  P   +   V + +Y 
Sbjct: 112 KGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYR 168

Query: 252 APEVL--RRNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIR----------- 297
            P+VL   + Y   ID+WSAG I   +   G P F     +     I R           
Sbjct: 169 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP 228

Query: 298 ---------------GKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
                                 +  PK++   ++L++N+L  NP  R++ EE L++P+  
Sbjct: 229 SMTKLPDYKPYPMYPATTSL-VNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287

Query: 343 NDN 345
           +  
Sbjct: 288 DFC 290

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207

 Score =  135 bits (341), Expect = 7e-37
 Identities = 40/209 (19%), Positives = 85/209 (40%), Gaps = 24/209 (11%)

Query: 354 GNVTSRIKQFSIMNKFKKKVLRVVAD--NLPQDQMAQIKQMFYMMDTD--KNGDLTFEEL 409
           G   S+ K+ + M     +   ++A       +++  + ++F  + +    +G +  EE 
Sbjct: 2   GCSVSKKKKKNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEF 61

Query: 410 KDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVT-MSVHLKRIGNDDILSQAFRFF 468
           +  L     + +      + +  DV  NG++   EFV  + V        + +  AF+ +
Sbjct: 62  QLALFRNRNRRN-LFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLY 120

Query: 469 DKNQSGFIEVDELKEVL---LEDNAGPNGDQTIRD----ILRDVDLDRDGRISFEEFKAM 521
           D  Q+GFIE +ELKE++   L ++     +  I           D   DG+I  +E+K  
Sbjct: 121 DLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDF 180

Query: 522 MTSGADWKMASRQYSRAMMSALSIKLFKD 550
           ++               ++  +++   KD
Sbjct: 181 VSLNPS-----------LIKNMTLPYLKD 198

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  139 bits (352), Expect = 8e-37
 Identities = 70/329 (21%), Positives = 120/329 (36%), Gaps = 58/329 (17%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
            D +    ELG G  G+  +     +G   A K I  E        + + RE++++    
Sbjct: 32  DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHEC- 88

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
             P IV +  A+     I + ME  +GG L   +   G   E+    V   +++ +    
Sbjct: 89  NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLR 148

Query: 200 ENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI----VGSPYYMAPE 254
           E   +MHRD+KP N L    +   ++K  DFG+S     G+    +    VG+  YM+PE
Sbjct: 149 EKHKIMHRDVKPSNILV---NSRGEIKLCDFGVS-----GQLIDSMANSFVGTRSYMSPE 200

Query: 255 VLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV--- 310
            L+   Y  + D+WS G+ +  +  G  P      + +             +  P+    
Sbjct: 201 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 260

Query: 311 -------------------------------------SKEAKELVKNMLDPNPYNRLTLE 333
                                                S E ++ V   L  NP  R  L+
Sbjct: 261 GRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK 320

Query: 334 EVLENPWIKNDNHAPNVSLGGNVTSRIKQ 362
           +++ + +IK  +    V   G + S I  
Sbjct: 321 QLMVHAFIKRSDA-EEVDFAGWLCSTIGL 348

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  137 bits (347), Expect = 1e-36
 Identities = 60/275 (21%), Positives = 113/275 (41%), Gaps = 19/275 (6%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
            D      ELGRG +G+  +   + +G+  A K+I         +   +  +++I     
Sbjct: 6   ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV--NSQEQKRLLMDLDISMRTV 63

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGG--ELFDRIVNK-GHYTERAAAAVGKTILRIVK 196
             P  VT+  A   +  +++ MEL +    + + ++++K     E     +  +I++ ++
Sbjct: 64  DCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 123

Query: 197 VCHENG-VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
             H    V+HRD+KP N L    +   Q+K  DFG+S +           G   YMAPE 
Sbjct: 124 HLHSKLSVIHRDVKPSNVLI---NALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPER 180

Query: 256 LR-----RNYGPEIDVWSAGVIIYILLCGVPPFWA-ETEEGIAHAIIRGKI-DFERDPWP 308
           +      + Y  + D+WS G+ +  L     P+ +  T       ++         D + 
Sbjct: 181 INPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF- 239

Query: 309 KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
             S E  +     L  N   R T  E++++P+   
Sbjct: 240 --SAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL 272

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166

 Score =  132 bits (335), Expect = 2e-36
 Identities = 29/153 (18%), Positives = 67/153 (43%), Gaps = 7/153 (4%)

Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
           V     + ++   K+ F ++D + +G +  ++L++    +G+     +    M     + 
Sbjct: 15  VFSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAM---IKEA 71

Query: 437 NGLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-G 494
           +G ++   F+T     LK    +D++  AF+  D +  G I+   L+E+L     G    
Sbjct: 72  SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELL--TTGGGRFT 129

Query: 495 DQTIRDILRDVDLDRDGRISFEEFKAMMTSGAD 527
            + I+++      D  G + ++    ++T G D
Sbjct: 130 PEEIKNMWAAFPPDVAGNVDYKNICYVITHGED 162

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  136 bits (345), Expect = 3e-36
 Identities = 75/302 (24%), Positives = 132/302 (43%), Gaps = 49/302 (16%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK-----TEIDIDDVRREV 132
            +++KY   +++G G +G+ ++  +   G   A K+I  +        T I      RE+
Sbjct: 18  GLMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAI------REI 70

Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG--GELFDRIVNKGHYTERAAAAVGKT 190
            +++ L  HPNIV+  +    +  + LV E  E    ++ D   NK    +         
Sbjct: 71  SLLKEL-HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDE--NKTGLQDSQIKIYLYQ 127

Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPY 249
           +LR V  CH++ ++HRDLKP+N L    + +  LK  DFGL+  F  P   +   V + +
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLI---NSDGALKLADFGLARAFGIPVRSYTHEVVTLW 184

Query: 250 YMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR---------- 297
           Y AP+VL   + Y   +D+WS G I   ++ G P F   T++     I            
Sbjct: 185 YRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREW 244

Query: 298 ---------GKIDFE-------RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
                     +  F+           P   +E  +L+ NML  +P  R++  + + +P+ 
Sbjct: 245 PQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304

Query: 342 KN 343
           K+
Sbjct: 305 KD 306

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  137 bits (347), Expect = 5e-36
 Identities = 79/311 (25%), Positives = 122/311 (39%), Gaps = 57/311 (18%)

Query: 76  EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
               +D++   +  G+G FG      E  TG + A KK+ ++            RE++IM
Sbjct: 18  SRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-------FRNRELQIM 70

Query: 136 RHLP--KHPNIVT-----YKEAYEDKDAIYL--VMELCEGGELFDRIVNKGHYTERAAAA 186
           + L    HPNIV      Y     D+  IYL  VME      L     N           
Sbjct: 71  QDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPI 129

Query: 187 VGKT----ILRIVKVCHEN--GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ 240
           + K     ++R +   H     V HRD+KP N L  + + +  LK  DFG +    P E 
Sbjct: 130 LIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVL-VNEA-DGTLKLCDFGSAKKLSPSEP 187

Query: 241 FCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAE------------ 286
               + S YY APE++   ++Y   +D+WS G I   ++ G P F  +            
Sbjct: 188 NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV 247

Query: 287 ----TEEGIAHAIIRGKIDF-----ERDPWPKV--------SKEAKELVKNMLDPNPYNR 329
               + E +   +     D      +  PW  V        +KEA +L+  +L   P  R
Sbjct: 248 LGCPSREVL-RKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEER 306

Query: 330 LTLEEVLENPW 340
           +   E L +P+
Sbjct: 307 MKPYEALCHPY 317

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score =  136 bits (344), Expect = 6e-36
 Identities = 79/315 (25%), Positives = 126/315 (40%), Gaps = 62/315 (19%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR--REVEIM 135
           ++  +Y   K LG G  G+     + +  +  A KKI                 RE++I+
Sbjct: 8   DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDP-----QSVKHALREIKII 62

Query: 136 RHLPKHPNIV--------------TYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHY 179
           R L  H NIV                  +  + +++Y+V E  E     D   ++ +G  
Sbjct: 63  RRL-DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET----DLANVLEQGPL 117

Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
            E  A      +LR +K  H   V+HRDLKP N      +E+  LK  DFGL+    P  
Sbjct: 118 LEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFI--NTEDLVLKIGDFGLARIMDPHY 175

Query: 240 QFC----EIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPF---------- 283
                  E + + +Y +P +L    NY   ID+W+AG I   +L G   F          
Sbjct: 176 SHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ 235

Query: 284 ---------WAETEEGI---AHAIIRGKIDFERDPW----PKVSKEAKELVKNMLDPNPY 327
                      E  + +       IR  +     P     P +S+EA + ++ +L  +P 
Sbjct: 236 LILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPM 295

Query: 328 NRLTLEEVLENPWIK 342
           +RLT EE L +P++ 
Sbjct: 296 DRLTAEEALSHPYMS 310

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211

 Score =  132 bits (334), Expect = 7e-36
 Identities = 37/201 (18%), Positives = 75/201 (37%), Gaps = 8/201 (3%)

Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIG-QKVSDPDVKMLMEAADVDG 436
              +P  +     + F  M    +G  T  E K  L + G  + ++  +  +    D + 
Sbjct: 13  QKAVPTQETHVWYRTF--MMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNK 70

Query: 437 NGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGD- 495
           +G +   EF+     + +   +  L   F+ +D + +G I+ +EL ++ +   A      
Sbjct: 71  DGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQT 130

Query: 496 ----QTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSALSIKLFKDK 551
               + I  +   +D++ DG ++ EEF   M    D      +          I   K  
Sbjct: 131 LSPEEFINLVFHKIDINNDGELTLEEFINGMAKDQDLLEIVYKSFDFSNVLRVICNGKQP 190

Query: 552 SMELTKSMELNKSMELKKSVE 572
            ME   S   +K+   K  ++
Sbjct: 191 DMETDSSKSPDKAGLGKVKMK 211

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143

 Score =  130 bits (329), Expect = 7e-36
 Identities = 40/148 (27%), Positives = 76/148 (51%), Gaps = 8/148 (5%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
             Q Q+ + K+ F M+D +++G +  E+L D L  +G+  +D  ++ +M     +  G +
Sbjct: 1   FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMS----EAPGPI 56

Query: 441 SCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-GDQTI 498
           +   F+T     L     +D++  AF  FD+  SGFI  D L+E+L     G    D+ +
Sbjct: 57  NFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELL--TTMGDRFTDEEV 114

Query: 499 RDILRDVDLDRDGRISFEEFKAMMTSGA 526
            ++ R+  +D+ G  ++ EF  ++  GA
Sbjct: 115 DEMYREAPIDKKGNFNYVEFTRILKHGA 142

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  135 bits (341), Expect = 1e-35
 Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 28/268 (10%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
             +    + +GRG FG+  +         +  K +A +++++E +      E+  +  + 
Sbjct: 7   YKEIEVEEVVGRGAFGVVCKA-------KWRAKDVAIKQIESESERKAFIVELRQLSRV- 58

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK--- 196
            HPNIV    A    + + LVME  EGG L++ +          AA      L+  +   
Sbjct: 59  NHPNIVKLYGAC--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 116

Query: 197 ---VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
                    ++HRDLKP N L       + LK  DFG +   +         GS  +MAP
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLLVA--GGTVLKICDFGTACDIQ--THMTNNKGSAAWMAP 172

Query: 254 EVLRRN-YGPEIDVWSAGVIIYILLCGVPPFW--AETEEGIAHAIIRGKIDFERDPWPK- 309
           EV   + Y  + DV+S G+I++ ++    PF         I  A+  G     R P  K 
Sbjct: 173 EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNG----TRPPLIKN 228

Query: 310 VSKEAKELVKNMLDPNPYNRLTLEEVLE 337
           + K  + L+      +P  R ++EE+++
Sbjct: 229 LPKPIESLMTRCWSKDPSQRPSMEEIVK 256

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208

 Score =  130 bits (329), Expect = 4e-35
 Identities = 27/180 (15%), Positives = 67/180 (37%), Gaps = 28/180 (15%)

Query: 364 SIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDP 423
           S+ N+++  V     ++L    ++++ + F   D D +G +  +E+    + + Q V+  
Sbjct: 18  SVGNQWQFNV-----EDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNAT 72

Query: 424 D---------VKMLMEAADVDGNGLLSCDEFVTMSVHL-----------KRIGNDDILSQ 463
           D         V++      V+    L  +++V  +              +      + + 
Sbjct: 73  DEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNS 132

Query: 464 AFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT 523
            +   D +  G ++VDELK ++   +      +         D D+ G++   E   +  
Sbjct: 133 YYDVLDDDGDGTVDVDELKTMMKAFDV---PQEAAYTFFEKADTDKSGKLERTELVHLFR 189

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208

 Score = 60.2 bits (146), Expect = 1e-10
 Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 8/75 (10%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVL--LEDNAGPNGDQT------IRDILRDVDLDRDGR 512
           L + F  FD +  G +E+DE+      +        +Q       +R       ++    
Sbjct: 38  LYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNG 97

Query: 513 ISFEEFKAMMTSGAD 527
           +  E++       A+
Sbjct: 98  LLREDWVEANRVFAE 112

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208

 Score = 53.7 bits (129), Expect = 3e-08
 Identities = 20/117 (17%), Positives = 40/117 (34%), Gaps = 15/117 (12%)

Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEE-------LKDGLNMIGQKVSDPDVKMLMEAA--- 432
           +     ++  F     +    L  E+         +      ++     + +L  +    
Sbjct: 77  EKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDV 136

Query: 433 -DVDGNGLLSCDEFVTMSVHLKRIG-NDDILSQAFRFFDKNQSGFIEVDELKEVLLE 487
            D DG+G +  DE  TM   +K      +     F   D ++SG +E  EL  +  +
Sbjct: 137 LDDDGDGTVDVDELKTM---MKAFDVPQEAAYTFFEKADTDKSGKLERTELVHLFRK 190

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score =  134 bits (339), Expect = 4e-35
 Identities = 70/302 (23%), Positives = 125/302 (41%), Gaps = 51/302 (16%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
              D Y   ++LGRG++    +   I   E    K +   K K +I     +RE++I+ +
Sbjct: 33  GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKK-KI-----KREIKILEN 86

Query: 138 LPKHPNIVTYKE---AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           L   PNI+T  +       +    +   +      F ++      T+         IL+ 
Sbjct: 87  LRGGPNIITLADIVKDPVSRTPALVFEHVNN--TDFKQLYQT--LTDYDIRFYMYEILKA 142

Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +  CH  G+MHRD+KP N +     E+ +L+ ID+GL+ F+ PG+++   V S Y+  PE
Sbjct: 143 LDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPE 200

Query: 255 VL--RRNYGPEIDVWSAGVIIYILLCGVPPFWA-----------------ETEEGIAHAI 295
           +L   + Y   +D+WS G ++  ++    PF+                  E         
Sbjct: 201 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 260

Query: 296 -------------IRGKIDFER----DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN 338
                           +  +ER    +    VS EA + +  +L  +  +RLT  E +E+
Sbjct: 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320

Query: 339 PW 340
           P+
Sbjct: 321 PY 322

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score =  133 bits (337), Expect = 4e-35
 Identities = 58/316 (18%), Positives = 119/316 (37%), Gaps = 53/316 (16%)

Query: 52  SKHASNVDKKSISFQLRSVVSNPAEGNI-LDKYTFGKELGRGEFGITHQCFEIETGETY- 109
             + S +  +S   +         E +I  ++   G+ +G+G FG  +          + 
Sbjct: 3   EMNLSLLSARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHG-------RWH 55

Query: 110 ---ACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEG 166
              A + I  E+   E  +   +REV   R   +H N+V +  A      + ++  LC+G
Sbjct: 56  GEVAIRLIDIERD-NEDQLKAFKREVMAYRQT-RHENVVLFMGACMSPPHLAIITSLCKG 113

Query: 167 GELFDRIVNKGHYTERAAAAVGKTILRIVK-VC------HENGVMHRDLKPENFLFADGS 219
             L+  + +     +           +I + +       H  G++H+DLK +N  +    
Sbjct: 114 RTLYSVVRDAKIVLDV------NKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY---- 163

Query: 220 ENSQLKAIDFGLS------IFFKPGEQFCEIVGSPYYMAPEVLRRN----------YGPE 263
           +N ++   DFGL          +  ++     G   ++APE++R+           +   
Sbjct: 164 DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKH 223

Query: 264 IDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS--KEAKELVKNM 321
            DV++ G I Y L     PF  +  E I   +  G     +    ++   KE  +++   
Sbjct: 224 SDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGM----KPNLSQIGMGKEISDILLFC 279

Query: 322 LDPNPYNRLTLEEVLE 337
                  R T  ++++
Sbjct: 280 WAFEQEERPTFTKLMD 295

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  133 bits (336), Expect = 5e-35
 Identities = 67/304 (22%), Positives = 120/304 (39%), Gaps = 27/304 (8%)

Query: 47  KHESVSKHASNVDKKSISFQLRSVVSNPAEGNI-LDKYTFGKELGRGEFGITHQCFEIET 105
           KH       S+ D  +          +  + +I        +++G G FG  H+      
Sbjct: 2   KHHHHHHPMSDYDIPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRA--EWH 59

Query: 106 GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCE 165
           G   A K + ++       +++  REV IM+ L +HPNIV +  A      + +V E   
Sbjct: 60  GSDVAVKILMEQDF-HAERVNEFLREVAIMKRL-RHPNIVLFMGAVTQPPNLSIVTEYLS 117

Query: 166 GGELFDRIVNKGHYTERAAAAVGKTILRIVK-VC------HENG--VMHRDLKPENFLFA 216
            G L+  +    H +        +  L +   V       H     ++HR+LK  N L  
Sbjct: 118 RGSLYRLL----HKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV- 172

Query: 217 DGSENSQLKAIDFGLSIFFKPGEQFCE-IVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIY 274
              +   +K  DFGLS          +   G+P +MAPEVLR      + DV+S GVI++
Sbjct: 173 --DKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILW 230

Query: 275 ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEAKELVKNMLDPNPYNRLTLE 333
            L     P+       +  A+       +R   P+ ++ +   +++      P+ R +  
Sbjct: 231 ELATLQQPWGNLNPAQVVAAVGFKC---KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFA 287

Query: 334 EVLE 337
            +++
Sbjct: 288 TIMD 291

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  133 bits (337), Expect = 9e-35
 Identities = 80/315 (25%), Positives = 127/315 (40%), Gaps = 62/315 (19%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           + KY    ++G+G FG   +    +TG+  A KK+  E  K    I  +R E++I++ L 
Sbjct: 16  VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKILQLL- 73

Query: 140 KHPNIVTYKE--------AYEDKDAIYLVMELCEG--GELFDRIVNKGHYTERAAAAVGK 189
           KH N+V   E            K +IYLV + CE     L   +     +T      V +
Sbjct: 74  KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNV--LVKFTLSEIKRVMQ 131

Query: 190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
            +L  +   H N ++HRD+K  N L    + +  LK  DFGL+  F   +       + Y
Sbjct: 132 MLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAK---NSQPNRY 185

Query: 250 --------YMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR-- 297
                   Y  PE+L   R+YGP ID+W AG I+  +    P     TE+     I +  
Sbjct: 186 TNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC 245

Query: 298 GKIDFERDPWPKVSK----------------------------EAKELVKNMLDPNPYNR 329
           G I    + WP V                               A +L+  +L  +P  R
Sbjct: 246 GSIT--PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQR 303

Query: 330 LTLEEVLENPWIKND 344
           +  ++ L + +  +D
Sbjct: 304 IDSDDALNHDFFWSD 318

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  132 bits (334), Expect = 1e-34
 Identities = 69/309 (22%), Positives = 116/309 (37%), Gaps = 49/309 (15%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR-----REVEI 134
             +Y    E+G G +G  ++  +  +G   A K +   ++               REV +
Sbjct: 8   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGGGGGGGLPISTVREVAL 64

Query: 135 MRHL--PKHPNIVTYKE-----AYEDKDAIYLVMELCEG--GELFDRIVNKGHYTERAAA 185
           +R L   +HPN+V   +       + +  + LV E  +       D+             
Sbjct: 65  LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKA-PPPGLPAETIK 123

Query: 186 AVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIV 245
            + +  LR +   H N ++HRDLKPEN L    +    +K  DFGL+  +        +V
Sbjct: 124 DLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGTVKLADFGLARIYSYQMALTPVV 180

Query: 246 GSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR--GKIDF 302
            + +Y APEVL +  Y   +D+WS G I   +    P F   +E      I    G    
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP- 239

Query: 303 ERDPWPKVSK-----------------------EAKELVKNMLDPNPYNRLTLEEVLENP 339
             D WP+                             +L+  ML  NP+ R++    L++ 
Sbjct: 240 -EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHS 298

Query: 340 WIKNDNHAP 348
           ++  D   P
Sbjct: 299 YLHKDEGNP 307

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450

 Score =  135 bits (341), Expect = 1e-34
 Identities = 50/156 (32%), Positives = 95/156 (60%), Gaps = 4/156 (2%)

Query: 371 KKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLME 430
            K+     D L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++ 
Sbjct: 296 HKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMIN 355

Query: 431 AADVDGNGLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDN 489
             D DGNG +   EF+T M+  +K   +++ + +AFR FDK+ +G+I   EL+ V+   N
Sbjct: 356 EVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM--TN 413

Query: 490 AGPN-GDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
            G    D+ + +++R+ D+D DG++++EEF  MMT+
Sbjct: 414 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 449

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450

 Score = 81.9 bits (202), Expect = 1e-16
 Identities = 33/153 (21%), Positives = 54/153 (35%), Gaps = 24/153 (15%)

Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
           D           Q   +   D     T  E+K   + +  ++            ++ G  
Sbjct: 239 DFFKSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDTLVNRI------------ELKG-- 284

Query: 439 LLSCDEFVTMSVHLKRIGNDDILS--------QAFRFFDKNQSGFIEVDELKEVLLEDNA 490
            +   E   +  H       D L+        +AF  FDK+  G I   EL  V+     
Sbjct: 285 -IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQ 343

Query: 491 GPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT 523
            P  +  ++D++ +VD D +G I F EF  MM 
Sbjct: 344 NPT-EAELQDMINEVDADGNGTIDFPEFLTMMA 375

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score =  138 bits (348), Expect = 2e-34
 Identities = 62/271 (22%), Positives = 96/271 (35%), Gaps = 35/271 (12%)

Query: 69  SVVSNPAEGNIL-DKYTFGKELGRGEFGITHQCF-EIETGETYACKKIAKEKLKTEIDID 126
           S +     G+I+  +Y     +  G  G  +        G     K      L    D +
Sbjct: 67  SFLPQLNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKG-----LVHSGDAE 121

Query: 127 DV---RREVEIMRHLPKHPNIVTYKEAYEDKDAI-----YLVMELCEGGELFDRIVNKGH 178
                  E + +  +  HP+IV      E  D       Y+VME   G  L         
Sbjct: 122 AQAMAMAERQFLAEV-VHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK--GQK 178

Query: 179 YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG 238
                A A    IL  +   H  G+++ DLKPEN +  +     QLK ID G        
Sbjct: 179 LPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE----QLKLIDLGAV---SRI 231

Query: 239 EQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRG 298
             F  + G+P + APE++R       D+++ G  +  L   +P       +G+       
Sbjct: 232 NSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLP------ 285

Query: 299 KIDFERDPWPKVSKEAKELVKNMLDPNPYNR 329
               E DP  K       L++  +DP+P  R
Sbjct: 286 ----EDDPVLKTYDSYGRLLRRAIDPDPRQR 312

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score =  133 bits (336), Expect = 2e-34
 Identities = 75/333 (22%), Positives = 124/333 (37%), Gaps = 82/333 (24%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
               KY+ GK LG G FGI  + F+IE+G+ +A KK+ ++            RE++IM+ 
Sbjct: 4   TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKN-------RELDIMKV 56

Query: 138 LPKHPNIVTYK--------------------------------------EAYEDKDAIYL 159
           L  H NI+                                                 + +
Sbjct: 57  L-DHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNV 115

Query: 160 VMELCEGGELFDRIVNKGHYTERAAAAVGKT----ILRIVKVCHENGVMHRDLKPENFLF 215
           +ME      L   + +           +       + R V   H  G+ HRD+KP+N L 
Sbjct: 116 IMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLL- 173

Query: 216 ADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVII 273
            + S+++ LK  DFG +    P E     + S +Y APE++     Y P ID+WS G + 
Sbjct: 174 VN-SKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232

Query: 274 YILLCGVPPFWAE----------------TEEGIAHAIIRGKIDF-----ERDPWPKV-- 310
             L+ G P F  E                T+E +   +     +      +   W K+  
Sbjct: 233 GELILGKPLFSGETSIDQLVRIIQIMGTPTKEQM-IRMNPHYTEVRFPTLKAKDWRKILP 291

Query: 311 ---SKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
                 A +L++ +L   P  R+   E + +P+
Sbjct: 292 EGTPSLAIDLLEQILRYEPDLRINPYEAMAHPF 324

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226

 Score =  128 bits (324), Expect = 2e-34
 Identities = 40/190 (21%), Positives = 77/190 (40%), Gaps = 12/190 (6%)

Query: 359 RIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTD--KNGDLTFEELKDGLNMI 416
            +  +          L          ++  + ++F  + +    +G +  EE +  L   
Sbjct: 20  DLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKT 79

Query: 417 GQKVSDPDVKMLMEAADVDGNGLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGF 475
            +K S      + +  D   NG+L  +EF   +SV       DD +  +F+ +D  Q GF
Sbjct: 80  NKKES-LFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGF 138

Query: 476 IEVDELKEVL---LEDNAGPNGDQTIRD----ILRDVDLDRDGRISFEEFKAMMTSGAD- 527
           IE  E+K+++   L ++     D  I D       + D   DG+I  EE+++++      
Sbjct: 139 IERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSL 198

Query: 528 WKMASRQYSR 537
            K  + QY +
Sbjct: 199 LKNMTLQYLK 208

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score =  131 bits (331), Expect = 8e-34
 Identities = 71/302 (23%), Positives = 126/302 (41%), Gaps = 48/302 (15%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            + ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+ +++H
Sbjct: 26  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKH 84

Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGK 189
           + KH N++      T   + E+ + +YLV  L       D   IV     T+     +  
Sbjct: 85  M-KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGA----DLNNIVKCQKLTDDHVQFLIY 139

Query: 190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
            ILR +K  H   ++HRDLKP N      +E+ +LK +DFGL+       +    V + +
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHTAD--EMTGYVATRW 194

Query: 250 YMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----------------TEEGI 291
           Y APE++    +Y   +D+WS G I+  LL G   F                     E +
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254

Query: 292 -------AHAIIRGKIDFERDPW----PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
                  A   I+      +  +       +  A +L++ ML  +   R+T  + L + +
Sbjct: 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314

Query: 341 IK 342
             
Sbjct: 315 FA 316

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score =  130 bits (329), Expect = 1e-33
 Identities = 74/302 (24%), Positives = 133/302 (44%), Gaps = 49/302 (16%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            +   Y     +G G +G      +  +GE  A KK+++   ++EI      RE+ +++H
Sbjct: 21  ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRELLLLKH 79

Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGK 189
           + +H N++      T   +  +    YLVM   +     D  +I+      E+    V +
Sbjct: 80  M-QHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT----DLQKIMGLKFSEEKIQYLVYQ 134

Query: 190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
            +L+ +K  H  GV+HRDLKP N      +E+ +LK +DFGL+       +    V + +
Sbjct: 135 -MLKGLKYIHSAGVVHRDLKPGNLAV---NEDCELKILDFGLARHADA--EMTGYVVTRW 188

Query: 250 YMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----------------TEEGI 291
           Y APEV+    +Y   +D+WS G I+  +L G   F  +                  E +
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFV 248

Query: 292 -------AHAIIRGKIDFERDPW----PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
                  A + I+      R  +    P+ S +A +L++ ML+ +   RLT  + L +P+
Sbjct: 249 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 308

Query: 341 IK 342
            +
Sbjct: 309 FE 310

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score =  125 bits (315), Expect = 1e-33
 Identities = 28/155 (18%), Positives = 50/155 (32%), Gaps = 19/155 (12%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQ--KVSDPDVKMLMEA---------A 432
             + ++K  F  +D DK+G +T  + +       +  ++     K+LM++          
Sbjct: 3   LWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLT 62

Query: 433 DVDGNGLLSCDEFVTMSVHLKRIGNDD-----ILSQAFRFFDKNQSGFIEVDELKEVLLE 487
            V G   +    F+     + +           L   FR  D N+   I  DE       
Sbjct: 63  AVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGM 122

Query: 488 DNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM 522
                            +D + DG +S EEF    
Sbjct: 123 LGLD---KTMAPASFDAIDTNNDGLLSLEEFVIAG 154

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 57.8 bits (140), Expect = 5e-10
 Identities = 11/117 (9%), Positives = 26/117 (22%), Gaps = 14/117 (11%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDV----------DLDRD 510
           +   F   D ++ G I   + + +                +L D            +   
Sbjct: 8   MKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGG 67

Query: 511 GRISFEEFKAMMTSGADWKMASRQYSRAMMSALSIKLF-KDKSMELTKSMELNKSME 566
             I    F   M        A       +      +    ++   +++  E      
Sbjct: 68  KGIDETTFINSMKEMVKNPEAKSVVEGPLPLFF--RAVDTNEDNNISRD-EYGIFFG 121

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 57.8 bits (140), Expect = 6e-10
 Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 2/74 (2%)

Query: 375 RVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADV 434
            V            +   F  +DT+++ +++ +E      M+G  +         +A D 
Sbjct: 82  MVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--LDKTMAPASFDAIDT 139

Query: 435 DGNGLLSCDEFVTM 448
           + +GLLS +EFV  
Sbjct: 140 NNDGLLSLEEFVIA 153

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 51.6 bits (124), Expect = 6e-08
 Identities = 13/119 (10%), Positives = 37/119 (31%), Gaps = 11/119 (9%)

Query: 377 VADNLPQDQMAQIKQMFYMM--DTDKNGDLTFEELKDGL-NMIGQKVSDPDVKMLMEAA- 432
           +     +  M  +  ++            +      + +  M+    +   V+  +    
Sbjct: 41  MKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFF 100

Query: 433 ---DVDGNGLLSCDEFVTMSVHLKRIG-NDDILSQAFRFFDKNQSGFIEVDELKEVLLE 487
              D + +  +S DE+         +G +  +   +F   D N  G + ++E      +
Sbjct: 101 RAVDTNEDNNISRDEYGIF---FGMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGSD 156

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score =  127 bits (321), Expect = 2e-33
 Identities = 27/165 (16%), Positives = 62/165 (37%), Gaps = 22/165 (13%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPD------VKMLMEAADV 434
                 +Q  +++   D D +G L  +EL++ +  + Q            +K  ++    
Sbjct: 10  SSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQ 69

Query: 435 DGNGLLSCDEFVTM---------SVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVL 485
             +G +   E   +             +++ + +   + +R +D + SGFIE +ELK  L
Sbjct: 70  RDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFL 129

Query: 486 LE-------DNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT 523
            +               +    +L+  D + DG++   E   ++ 
Sbjct: 130 KDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLP 174

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score =  107 bits (268), Expect = 3e-26
 Identities = 27/163 (16%), Positives = 64/163 (39%), Gaps = 20/163 (12%)

Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVS--------DPDVKMLMEAADV 434
                +  + +   DTD +G +  EELK+ L  + +K +             ++++  D 
Sbjct: 99  LKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDS 158

Query: 435 DGNGLLSCDEFVTM--------SVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLL 486
           + +G L   E   +                     ++AF  +D++ +G+I+ +EL  +L 
Sbjct: 159 NNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLK 218

Query: 487 EDNAGPNGDQTIRDILRD----VDLDRDGRISFEEFKAMMTSG 525
           +       +  I +I       + L   G++   +   ++++G
Sbjct: 219 DLCEKNKQELDINNISTYKKNIMALSDGGKLYRTDLALILSAG 261

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score = 63.0 bits (153), Expect = 3e-11
 Identities = 15/78 (19%), Positives = 33/78 (42%), Gaps = 5/78 (6%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVL--LEDN---AGPNGDQTIRDILRDVDLDRDGRISF 515
             + +  FD + SG++E  EL+ ++  L      AG      ++  +       DG+I  
Sbjct: 18  FFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGI 77

Query: 516 EEFKAMMTSGADWKMASR 533
            E   ++ +  ++ +  R
Sbjct: 78  VELAHVLPTEENFLLLFR 95

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score = 46.4 bits (110), Expect = 1e-05
 Identities = 12/84 (14%), Positives = 27/84 (32%), Gaps = 5/84 (5%)

Query: 370 KKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSD-PDVKML 428
             +   ++     +    +  + F + D D NG +   EL   L  + +K     D+  +
Sbjct: 174 PVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNI 233

Query: 429 MEA----ADVDGNGLLSCDEFVTM 448
                    +   G L   +   +
Sbjct: 234 STYKKNIMALSDGGKLYRTDLALI 257

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  127 bits (321), Expect = 3e-33
 Identities = 62/273 (22%), Positives = 114/273 (41%), Gaps = 31/273 (11%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID----IDDVRREVEIMRHLP 139
            + K++G+G FG+ H+   ++     A K +     + E +      + +REV IM +L 
Sbjct: 22  EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL- 80

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK-VC 198
            HPNIV         +   +VME    G+L+ R+++K H  +          LR++  + 
Sbjct: 81  NHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPIKW------SVKLRLMLDIA 132

Query: 199 ------HENG--VMHRDLKPENFLFADGSENSQ--LKAIDFGLSIFFKPGEQFCEIVGSP 248
                       ++HRDL+  N       EN+    K  DFGLS           ++G+ 
Sbjct: 133 LGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV--HSVSGLLGNF 190

Query: 249 YYMAPEVLR---RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD 305
            +MAPE +     +Y  + D +S  +I+Y +L G  PF   +   I    +  +    R 
Sbjct: 191 QWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG-LRP 249

Query: 306 PWPK-VSKEAKELVKNMLDPNPYNRLTLEEVLE 337
             P+      + +++     +P  R     +++
Sbjct: 250 TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score =  129 bits (326), Expect = 4e-33
 Identities = 69/302 (22%), Positives = 125/302 (41%), Gaps = 48/302 (15%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            +   Y   + +G G +G      +  TG   A KK+ +   ++E+      RE+ +++H
Sbjct: 22  EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYR-PFQSELFAKRAYRELRLLKH 80

Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGK 189
           + +H N++      T  E  +D    YLVM         D  +++      E     +  
Sbjct: 81  M-RHENVIGLLDVFTPDETLDDFTDFYLVMPFMGT----DLGKLMKHEKLGEDRIQFLVY 135

Query: 190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
            +L+ ++  H  G++HRDLKP N      +E+ +LK +DFGL+       +    V + +
Sbjct: 136 QMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGLARQADS--EMTGYVVTRW 190

Query: 250 YMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----------------TEEGI 291
           Y APEV+     Y   +D+WS G I+  ++ G   F                     E +
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV 250

Query: 292 -------AHAIIRGKIDFERDPW----PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW 340
                  A   ++G  + E+  +       S  A  L++ ML  +   R+T  E L +P+
Sbjct: 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPY 310

Query: 341 IK 342
            +
Sbjct: 311 FE 312

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109

 Score =  120 bits (304), Expect = 6e-33
 Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 6/111 (5%)

Query: 416 IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGF 475
               ++D DV   ++A   +     +   F        +  +D  + +AF   D+++SGF
Sbjct: 3   FSGILADADVAAALKA--CEAADSFNYKAFFAKVGLTAKSADD--IKKAFFVIDQDKSGF 58

Query: 476 IEVDELKEVL--LEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           IE DELK  L      A    D   +  L+  D D DG I  +E+ A++ +
Sbjct: 59  IEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVKA 109

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109

 Score = 60.3 bits (147), Expect = 2e-11
 Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 3/71 (4%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGL---NMIGQKVSDPDVKMLMEAADVDGN 437
           L       IK+ F+++D DK+G +  +ELK  L   +   + ++D + K  ++A D DG+
Sbjct: 36  LTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGD 95

Query: 438 GLLSCDEFVTM 448
           G +  DE+  +
Sbjct: 96  GAIGVDEWAAL 106

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108

 Score =  120 bits (304), Expect = 6e-33
 Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 6/107 (5%)

Query: 420 VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVD 479
           + D DV   + A     +      EF        +  + D + +AF   D+++SGFIE D
Sbjct: 6   LKDADVAAALAACSAADS--FKHKEFFAKVGLASK--SLDDVKKAFYVIDQDKSGFIEED 61

Query: 480 ELKEVL--LEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           ELK  L     +A    D   +  L D D D DG I  +EF AM+ +
Sbjct: 62  ELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIKA 108

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108

 Score = 57.2 bits (139), Expect = 2e-10
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKD---GLNMIGQKVSDPDVKMLMEAADVDGN 437
           L    +  +K+ FY++D DK+G +  +ELK      +   + ++D + K  +   D DG+
Sbjct: 35  LASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGD 94

Query: 438 GLLSCDEFVTM 448
           G++  DEF  M
Sbjct: 95  GMIGVDEFAAM 105

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score =  128 bits (324), Expect = 7e-33
 Identities = 74/305 (24%), Positives = 125/305 (40%), Gaps = 50/305 (16%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           ++  +YT    +G G +G+    ++       A KKI     + +       RE++I+  
Sbjct: 24  DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI--SPFEHQTYCQRTLREIKILLR 81

Query: 138 LPKHPNIVTYK-----EAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKT 190
             +H NI+           E    +Y+V +L E     D  +++   H +          
Sbjct: 82  F-RHENIIGINDIIRAPTIEQMKDVYIVQDLMET----DLYKLLKTQHLSNDHICYFLYQ 136

Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC----EIVG 246
           ILR +K  H   V+HRDLKP N L    +    LK  DFGL+    P         E V 
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVA 193

Query: 247 SPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----------------TE 288
           + +Y APE++   + Y   ID+WS G I+  +L   P F  +                ++
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253

Query: 289 EGI-------AHAIIRGKIDFERDPW----PKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
           E +       A   +       + PW    P    +A +L+  ML  NP+ R+ +E+ L 
Sbjct: 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313

Query: 338 NPWIK 342
           +P+++
Sbjct: 314 HPYLE 318

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score =  129 bits (327), Expect = 1e-32
 Identities = 76/354 (21%), Positives = 141/354 (39%), Gaps = 53/354 (14%)

Query: 34  RNDASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGE 93
               +  +        S      N+ K  +  Q  SV    +   +L +Y   K +G G 
Sbjct: 15  DVKIAFCQGFDKQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGA 74

Query: 94  FGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV------TY 147
            GI    ++       A KK+++   + +       RE+ +M+ +  H NI+      T 
Sbjct: 75  QGIVCAAYDAVLDRNVAIKKLSR-PFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTP 132

Query: 148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRD 207
           ++  E+   +YLVMEL +      +++      ER +  + + +L  +K  H  G++HRD
Sbjct: 133 QKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSYLLYQ-MLCGIKHLHSAGIIHRD 189

Query: 208 LKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDV 266
           LKP N +      +  LK +DFGL+            V + YY APEV L   Y   +D+
Sbjct: 190 LKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDI 246

Query: 267 WSAGVIIYILLCGVPPFWAE----------------TEEGI------AHAIIRGKIDFER 304
           WS G I+  ++     F                     E +          +  +  +  
Sbjct: 247 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAG 306

Query: 305 DPWPKV----------------SKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
             +PK+                + +A++L+  ML  +P  R+++++ L++P+I 
Sbjct: 307 LTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145

 Score =  120 bits (304), Expect = 2e-32
 Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 8/145 (5%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
               QI++ F + D D +G ++ EEL   L  +G+  ++ ++  +    +     L    
Sbjct: 2   ASADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDL---A 58

Query: 444 EFVTM--SVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-GDQTIRD 500
            F T+              +  AFR  DK  +G I+  EL+++L   N G       + +
Sbjct: 59  TFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLL--LNLGDALTSSEVEE 116

Query: 501 ILRDVDLDRDGRISFEEFKAMMTSG 525
           ++++V +  DG I++E F  M+ +G
Sbjct: 117 LMKEVSVSGDGAINYESFVDMLVTG 141

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145

 Score = 60.6 bits (148), Expect = 3e-11
 Identities = 19/67 (28%), Positives = 36/67 (53%)

Query: 382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLS 441
           P +Q  ++   F  +D + NG +   EL+  L  +G  ++  +V+ LM+   V G+G ++
Sbjct: 71  PTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAIN 130

Query: 442 CDEFVTM 448
            + FV M
Sbjct: 131 YESFVDM 137

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172

 Score =  121 bits (306), Expect = 2e-32
 Identities = 30/144 (20%), Positives = 62/144 (43%), Gaps = 10/144 (6%)

Query: 382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQK-VSDPDVKMLMEAADVDGNGLL 440
                + +  +F  +D D++G ++  EL+  L+       +   V+ ++   D +    +
Sbjct: 2   ALPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGV 61

Query: 441 SCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-GDQTIR 499
           +  EF  +  ++            FR +D++ SG I+ +ELK+ L     G    DQ   
Sbjct: 62  NFSEFTGVWKYITD------WQNVFRTYDRDNSGMIDKNELKQAL--SGFGYRLSDQFHD 113

Query: 500 DILRDVDLDRDGRISFEEFKAMMT 523
            ++R  D    G+I+F++F     
Sbjct: 114 ILIRKFDRQGRGQIAFDDFIQGCI 137

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172

 Score = 84.2 bits (209), Expect = 4e-19
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 6/95 (6%)

Query: 386 MAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEF 445
           +   + +F   D D +G +   ELK  L+  G ++SD    +L+   D  G G ++ D+F
Sbjct: 73  ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDF 132

Query: 446 VTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDE 480
           +   + L+R      L+  FR +D +Q G+I+V  
Sbjct: 133 IQGCIVLQR------LTDIFRRYDTDQDGWIQVSY 161

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172

 Score = 77.7 bits (192), Expect = 7e-17
 Identities = 23/80 (28%), Positives = 35/80 (43%)

Query: 458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEE 517
              L   F+  DK++SG I   EL++ L      P    T+R I+   D +    ++F E
Sbjct: 6   QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSE 65

Query: 518 FKAMMTSGADWKMASRQYSR 537
           F  +     DW+   R Y R
Sbjct: 66  FTGVWKYITDWQNVFRTYDR 85

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148

 Score =  120 bits (304), Expect = 3e-32
 Identities = 31/148 (20%), Positives = 64/148 (43%), Gaps = 10/148 (6%)

Query: 385 QMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDV-KMLMEAADVDGNGLLSCD 443
                K +F + D    G +  + L D L  IG   ++  V  ++   + +     L+ D
Sbjct: 2   ATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLD 61

Query: 444 EFVT-MSVHLK-----RIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-GDQ 496
           +    + V+ K          +   +AF+ FDK  +G + V +L+ +L     G    D 
Sbjct: 62  QITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYML--TGLGEKLTDA 119

Query: 497 TIRDILRDVDLDRDGRISFEEFKAMMTS 524
            + ++L+ V++D +G I +++F   +  
Sbjct: 120 EVDELLKGVEVDSNGEIDYKKFIEDVLR 147

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148

 Score = 60.7 bits (148), Expect = 3e-11
 Identities = 16/70 (22%), Positives = 36/70 (51%)

Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
           D   + +     + F + D +  G ++  +L+  L  +G+K++D +V  L++  +VD NG
Sbjct: 75  DATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNG 134

Query: 439 LLSCDEFVTM 448
            +   +F+  
Sbjct: 135 EIDYKKFIED 144

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score =  126 bits (318), Expect = 4e-32
 Identities = 65/312 (20%), Positives = 114/312 (36%), Gaps = 56/312 (17%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID------IDDVR-- 129
            +   YT  + +  G +G      +   G   A K++                    R  
Sbjct: 19  AMQSPYTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVL 77

Query: 130 REVEIMRHLPKHPNIVTYK-----EAYEDKDAIYLVMELCEGGELFD--RIVNKGHY--T 180
           RE+ ++ H   HPNI+  +             +YLV EL       D  ++++      +
Sbjct: 78  REIRLLNHF-HHPNILGLRDIFVHFEEPAMHKLYLVTELMR----TDLAQVIHDQRIVIS 132

Query: 181 ERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ 240
            +        IL  + V HE GV+HRDL P N L    ++N+ +   DF L+        
Sbjct: 133 PQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL---ADNNDITICDFNLAREDTADAN 189

Query: 241 FCEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAE------------ 286
               V   +Y APE++   + +   +D+WSAG ++  +      F               
Sbjct: 190 KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEV 249

Query: 287 ----TEEGI-------AHAIIRGKI-DFERDPW----PKVSKEAKELVKNMLDPNPYNRL 330
                 E +       A   +R  + +     W    P     A +L+  ML+ NP  R+
Sbjct: 250 VGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRI 309

Query: 331 TLEEVLENPWIK 342
           + E+ L +P+ +
Sbjct: 310 STEQALRHPYFE 321

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204

 Score =  121 bits (306), Expect = 4e-32
 Identities = 32/182 (17%), Positives = 69/182 (37%), Gaps = 30/182 (16%)

Query: 385 QMAQIKQMF-YMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
             AQ+++ +   ++   +G L   E K    +   + +   V+ +  A D +G+  +   
Sbjct: 20  DAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFL 79

Query: 444 EFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLL----------------E 487
           E+V     + R   +  L   F+ +DK+++G I+  EL +++                 +
Sbjct: 80  EYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQ 139

Query: 488 DNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT-------------SGADWKMASRQ 534
                  ++ +  I   VD + DG++S  EF                  + + W    R+
Sbjct: 140 QGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKWVMKMLQMDLNPSSWISQQRR 199

Query: 535 YS 536
            S
Sbjct: 200 KS 201

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156

 Score =  119 bits (302), Expect = 6e-32
 Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 10/153 (6%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGD--LTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
           L QD++  +K +F + D     D  +   +L D    +G    + DV  +       G  
Sbjct: 3   LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGT-HKMGEK 61

Query: 439 LLSCDEFVTM--SVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-GD 495
            L  +EF+     +     G      +AF+ FD+   GFI   EL+ VL     G    D
Sbjct: 62  SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTA--LGERLSD 119

Query: 496 QTIRDILRDVDL--DRDGRISFEEFKAMMTSGA 526
           + + +I++  DL  D +G + +E+F   + +G 
Sbjct: 120 EDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGP 152

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score =  125 bits (316), Expect = 6e-32
 Identities = 81/313 (25%), Positives = 130/313 (41%), Gaps = 58/313 (18%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           NI   +     LG G +G+        TGE  A KKI  E     +      RE++I++H
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI--EPFDKPLFALRTLREIKILKH 65

Query: 138 LPKHPNIVTYK-----EAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKT 190
             KH NI+T       +++E+ + +Y++ EL +     D  R+++    ++         
Sbjct: 66  F-KHENIITIFNIQRPDSFENFNEVYIIQELMQT----DLHRVISTQMLSDDHIQYFIYQ 120

Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP-- 248
            LR VKV H + V+HRDLKP N L    + N  LK  DFGL+                  
Sbjct: 121 TLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177

Query: 249 ---------YYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAE----------- 286
                    +Y APEV+     Y   +DVWS G I+  L    P F              
Sbjct: 178 GMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFG 237

Query: 287 ------TEEGI-------AHAIIRGKIDFERDPW----PKVSKEAKELVKNMLDPNPYNR 329
                 ++  +       A   I+    +   P     P+V+ +  +L++ ML  +P  R
Sbjct: 238 IIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKR 297

Query: 330 LTLEEVLENPWIK 342
           +T +E LE+P+++
Sbjct: 298 ITAKEALEHPYLQ 310

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  125 bits (315), Expect = 6e-32
 Identities = 70/307 (22%), Positives = 123/307 (40%), Gaps = 57/307 (18%)

Query: 81  DKYTFGKELGRGEFGITHQCFEI-ETGETYACKKIAKEKLK-----TEIDIDDVRREVEI 134
            +Y    E+G G +G   +  ++   G   A K++  +  +     + I      REV +
Sbjct: 11  QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTI------REVAV 64

Query: 135 MRHL--PKHPNIVTYKE-----AYEDKDAIYLVMELCEG--GELFDRIVNKGHYTERAAA 185
           +RHL   +HPN+V   +       + +  + LV E  +       D++   G  TE    
Sbjct: 65  LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI-- 122

Query: 186 AVGKT----ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF 241
              K     +LR +   H + V+HRDLKP+N L    + + Q+K  DFGL+  +      
Sbjct: 123 ---KDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIYSFQMAL 176

Query: 242 CEIVGSPYYMAPEVL-RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR--- 297
             +V + +Y APEVL + +Y   +D+WS G I   +    P F   ++      I+    
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236

Query: 298 ----------------GKIDFERDPW----PKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
                                   P       + +  K+L+   L  NP  R++    L 
Sbjct: 237 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296

Query: 338 NPWIKND 344
           +P+ ++ 
Sbjct: 297 HPYFQDL 303

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  126 bits (319), Expect = 7e-32
 Identities = 72/331 (21%), Positives = 131/331 (39%), Gaps = 73/331 (22%)

Query: 79  ILDKYTF-GKELGRGEFGITH--QCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           + D + + G ++GRG +G  +  +  + +  + YA K+I    +          RE+ ++
Sbjct: 18  VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMS-----ACREIALL 72

Query: 136 RHLPKHPNIVTYKEAYEDK--DAIYLVMELCEG--GELFDRIVNKGHYTERAA--AAVGK 189
           R L KHPN+++ ++ +       ++L+ +  E     +           +       + K
Sbjct: 73  REL-KHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVK 131

Query: 190 T----ILRIVKVCHENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLS-IFFKPGEQF-- 241
           +    IL  +   H N V+HRDLKP N L   +G E  ++K  D G + +F  P +    
Sbjct: 132 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLAD 191

Query: 242 --CEIVGSPYYMAPEVL--RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR 297
               +V + +Y APE+L   R+Y   ID+W+ G I   LL   P F    E+        
Sbjct: 192 LDPVVV-TFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH 250

Query: 298 G----KIDFE------RDPWPKVSK----------------------------------E 313
                +I F          W  + K                                  +
Sbjct: 251 HDQLDRI-FNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSK 309

Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
           A  L++ +L  +P  R+T E+ +++P+   D
Sbjct: 310 AFHLLQKLLTMDPIKRITSEQAMQDPYFLED 340

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110

 Score =  118 bits (297), Expect = 8e-32
 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 6/112 (5%)

Query: 416 IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGF 475
               +   D+K  ++A  V   G  +  +F  + V LK +  +D+  + F+  D + SGF
Sbjct: 3   AKDLLKADDIKKALDA--VKAEGSFNHKKFFAL-VGLKAMSANDVK-KVFKAIDADASGF 58

Query: 476 IEVDELKEVL--LEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG 525
           IE +ELK VL     +     D   +  L+  D D DG+I  +EF+ ++   
Sbjct: 59  IEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHEA 110

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110

 Score = 61.8 bits (151), Expect = 4e-12
 Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 3/64 (4%)

Query: 388 QIKQMFYMMDTDKNGDLTFEELKD---GLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDE 444
            +K++F  +D D +G +  EELK         G+ ++D + K  ++AAD DG+G +  DE
Sbjct: 43  DVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDE 102

Query: 445 FVTM 448
           F T+
Sbjct: 103 FETL 106

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109

 Score =  117 bits (296), Expect = 9e-32
 Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 6/112 (5%)

Query: 416 IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGF 475
           + + +   D+   +        G      F  +     +   D  + + F   DK+QSGF
Sbjct: 2   MTKVLKADDINKAIS--AFKDPGTFDYKRFFHLVGLKGK--TDAQVKEVFEILDKDQSGF 57

Query: 476 IEVDELKEVL--LEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG 525
           IE +ELK VL     +     D   + +L   D D DG+I  +EF  M+   
Sbjct: 58  IEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQA 109

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109

 Score = 56.8 bits (138), Expect = 2e-10
 Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 3/64 (4%)

Query: 388 QIKQMFYMMDTDKNGDLTFEELKD---GLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDE 444
           Q+K++F ++D D++G +  EELK    G +  G+ ++D + K L+ A D D +G +  DE
Sbjct: 42  QVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADE 101

Query: 445 FVTM 448
           F  M
Sbjct: 102 FAKM 105

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  122 bits (308), Expect = 1e-31
 Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 19/265 (7%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK-TEIDIDDVRREVEIMRHLPKHP 142
           T  + +G G FG  ++      G+  A K    +  +     I++VR+E ++   L KHP
Sbjct: 10  TLEEIIGIGGFGKVYRA--FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHP 66

Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
           NI+  +     +  + LVME   GG L   +  K              I R +   H+  
Sbjct: 67  NIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-RIPPDILVNWAVQIARGMNYLHDEA 125

Query: 203 ---VMHRDLKPENFL-----FADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
              ++HRDLK  N L           N  LK  DFGL+  +    +     G+  +MAPE
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-AGAYAWMAPE 184

Query: 255 VLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSK 312
           V+R + +    DVWS GV+++ LL G  PF       +A+ +   K      P P    +
Sbjct: 185 VIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNK---LALPIPSTCPE 241

Query: 313 EAKELVKNMLDPNPYNRLTLEEVLE 337
              +L+++  +P+P++R +   +L+
Sbjct: 242 PFAKLMEDCWNPDPHSRPSFTNILD 266

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score =  124 bits (312), Expect = 3e-31
 Identities = 70/312 (22%), Positives = 130/312 (41%), Gaps = 57/312 (18%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            +L +Y   K +G G  GI    ++       A KK+++   + +       RE+ +M+ 
Sbjct: 22  TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYRELVLMKC 80

Query: 138 LPKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGK 189
           +  H NI+      T +++ E+   +Y+VMEL +     +  +++      ER +  + +
Sbjct: 81  V-NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD----ANLCQVIQMELDHERMSYLLYQ 135

Query: 190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
            +L  +K  H  G++HRDLKP N +      +  LK +DFGL+            V + Y
Sbjct: 136 -MLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSFMMTPYVVTRY 191

Query: 250 YMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAE----------------TEEGI- 291
           Y APEV L   Y   +D+WS G I+  ++ G   F                     E + 
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 251

Query: 292 -----AHAIIRG-----KIDFER-----------DPWPKVSKEAKELVKNMLDPNPYNRL 330
                    +          FE+           +     + +A++L+  ML  +   R+
Sbjct: 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 311

Query: 331 TLEEVLENPWIK 342
           +++E L++P+I 
Sbjct: 312 SVDEALQHPYIN 323

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191

 Score =  118 bits (298), Expect = 4e-31
 Identities = 30/172 (17%), Positives = 56/172 (32%), Gaps = 24/172 (13%)

Query: 374 LRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEEL-----KDGLNMIGQKVSDPDVKML 428
            ++ +D      + + K MF  +D + NG ++ +E+        +N +G           
Sbjct: 3   SKLTSDFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKD 62

Query: 429 MEAADVDGNGLLSC-----DEFVTMSVHLKRIGND-----------DILSQAFRFFDKNQ 472
              A   G G+          ++     L     +                 F   DK+Q
Sbjct: 63  AVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQ 122

Query: 473 SGFIEVDELKEVLLEDNAGPN-GDQTIRDILRDVDLDRDGRISFEEFKAMMT 523
           +G I +DE K       AG     +   +  R  D+D  G++  +E      
Sbjct: 123 NGAITLDEWKAYT--KAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 172

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191

 Score = 67.1 bits (164), Expect = 4e-13
 Identities = 22/87 (25%), Positives = 32/87 (36%)

Query: 365 IMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPD 424
              K     L   A N P         +F ++D D+NG +T +E K      G   S  D
Sbjct: 87  GWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSED 146

Query: 425 VKMLMEAADVDGNGLLSCDEFVTMSVH 451
            +      D+D +G L  DE     + 
Sbjct: 147 CEETFRVCDIDESGQLDVDEMTRQHLG 173

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score =  121 bits (305), Expect = 8e-31
 Identities = 68/266 (25%), Positives = 110/266 (41%), Gaps = 19/266 (7%)

Query: 74  PAEGNILD-KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDV---- 128
              G I++ +Y    +LG G     +   +       A K      +       +     
Sbjct: 3   HMIGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKA-----IFIPPREKEETLKR 57

Query: 129 -RREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAV 187
             REV     L  H NIV+  +  E+ D  YLVME  EG  L + I + G  +   A   
Sbjct: 58  FEREVHNSSQL-SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINF 116

Query: 188 GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE--QFCEIV 245
              IL  +K  H+  ++HRD+KP+N L      N  LK  DFG++         Q   ++
Sbjct: 117 TNQILDGIKHAHDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKALSETSLTQTNHVL 173

Query: 246 GSPYYMAPEVLRRNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI-DFE 303
           G+  Y +PE  +        D++S G+++Y +L G PPF  ET   IA   I+  + +  
Sbjct: 174 GTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVT 233

Query: 304 RDPWPKVSKEAKELVKNMLDPNPYNR 329
            D    + +    ++    + +  NR
Sbjct: 234 TDVRKDIPQSLSNVILRATEKDKANR 259

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198

 Score =  117 bits (295), Expect = 1e-30
 Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 9/152 (5%)

Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVS-DPDVKMLMEAADVDG 436
            + L   +  Q  + F  M    +G LT  E K    +     S +  V+ + E  D + 
Sbjct: 8   VEELSATECHQWYKKF--MTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNK 65

Query: 437 NGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVL--LEDNAGPNG 494
           +G +   E+V     + +   D  L   F+ +D + +G I+  EL  ++  +      N 
Sbjct: 66  DGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNE 125

Query: 495 DQTIRD----ILRDVDLDRDGRISFEEFKAMM 522
             T  +    +   +D++ DG +S EEF   +
Sbjct: 126 AMTAEEFTNMVFDKIDINGDGELSLEEFMEGV 157

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198

 Score = 57.9 bits (140), Expect = 7e-10
 Identities = 26/125 (20%), Positives = 55/125 (44%), Gaps = 9/125 (7%)

Query: 371 KKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLME 430
           K+   +   +   ++  +  QMF   D +K+G + F E    L+++ +   D  ++   +
Sbjct: 38  KQFFGLKNLSPSANKYVE--QMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFK 95

Query: 431 AADVDGNGLLSCDEFVTMSVHLKRIGN-------DDILSQAFRFFDKNQSGFIEVDELKE 483
             DVDGNG +   E + +   ++ I         ++  +  F   D N  G + ++E  E
Sbjct: 96  LYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFME 155

Query: 484 VLLED 488
            + +D
Sbjct: 156 GVQKD 160

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score =  116 bits (293), Expect = 1e-30
 Identities = 31/163 (19%), Positives = 56/163 (34%), Gaps = 26/163 (15%)

Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI----GQKVSDPDVKMLMEA------- 431
                ++K+ F   D D NG L   + +     I    G+     +V+ L  A       
Sbjct: 3   AIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDY 62

Query: 432 ----ADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQ--------AFRFFDKNQSGFIEVD 479
               A V  +G L+ ++F+ ++ +L     +   ++             DKN  G I  D
Sbjct: 63  LAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINAD 122

Query: 480 ELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM 522
           E    L              +    VD + +G +S +E    +
Sbjct: 123 EFAAWLTALGMS---KAEAAEAFNQVDTNGNGELSLDELLTAV 162

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 58.2 bits (141), Expect = 4e-10
 Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
            +  +     +K +  M D + +G +  +E    L  +G  +S  +        D +GNG
Sbjct: 94  ASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNG 151

Query: 439 LLSCDEFVTM 448
            LS DE +T 
Sbjct: 152 ELSLDELLTA 161

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 56.3 bits (136), Expect = 2e-09
 Identities = 10/78 (12%), Positives = 30/78 (38%), Gaps = 14/78 (17%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVL--LEDNAGPNGD------------QTIRDILRDVD 506
           L + F  +D + +G +E  + ++    + +  G +                   + ++  
Sbjct: 9   LKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAG 68

Query: 507 LDRDGRISFEEFKAMMTS 524
           +  DG ++ E+F  +  +
Sbjct: 69  VGSDGSLTEEQFIRVTEN 86

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 56.3 bits (136), Expect = 2e-09
 Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 12/106 (11%)

Query: 391 QMFYMMDTDKNGDLTFEE--------LKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSC 442
            +        +G LT E+        + +       +V  P VK ++   D + +G ++ 
Sbjct: 62  YLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINA 121

Query: 443 DEFVTMSVHLKRIG-NDDILSQAFRFFDKNQSGFIEVDELKEVLLE 487
           DEF      L  +G +    ++AF   D N +G + +DEL   + +
Sbjct: 122 DEFAAW---LTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVRD 164

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196

 Score =  117 bits (295), Expect = 1e-30
 Identities = 31/153 (20%), Positives = 70/153 (45%), Gaps = 9/153 (5%)

Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
           V     Q Q+ + K+ F ++D DK+G ++  +++   + +G+  ++ ++  ++     + 
Sbjct: 47  VFAMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVA----EA 102

Query: 437 NGLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-G 494
            G ++   F+T     +     +D++  AF  FD+   G  + + LK  L     G    
Sbjct: 103 PGPINFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEG-DGKCKEETLKRSL--TTWGEKFS 159

Query: 495 DQTIRDILRDVDLDRDGRISFEEFKAMMTSGAD 527
              +   L +  +D +G I  ++F  ++T GA 
Sbjct: 160 QDEVDQALSEAPIDGNGLIDIKKFAQILTKGAK 192

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186

 Score =  116 bits (293), Expect = 2e-30
 Identities = 19/164 (11%), Positives = 56/164 (34%), Gaps = 17/164 (10%)

Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQ---------KVSDPDVKM 427
           + ++     + ++K     +D   +G ++ E+ +     I +         + +  +   
Sbjct: 4   ITESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLR 63

Query: 428 LMEAADVDGNGLLSCDEFVTMSVHL-------KRIGNDDILSQAFRFFDKNQSGFIEVDE 480
           + +   +     +S +E    +          ++          +   D ++ G++ + E
Sbjct: 64  VADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPE 123

Query: 481 LKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
            K  L         D         +D +++G+IS +EF   +  
Sbjct: 124 FKAFLQAVGPDLT-DDKAITCFNTLDFNKNGQISRDEFLVTVND 166

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186

 Score = 63.2 bits (154), Expect = 8e-12
 Identities = 22/82 (26%), Positives = 36/82 (43%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
             + Q   M+  +DTDK+G ++  E K  L  +G  ++D          D + NG +S D
Sbjct: 99  MAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRD 158

Query: 444 EFVTMSVHLKRIGNDDILSQAF 465
           EF+           +  L+ AF
Sbjct: 159 EFLVTVNDFLFGLEETALANAF 180

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  119 bits (300), Expect = 2e-30
 Identities = 47/268 (17%), Positives = 93/268 (34%), Gaps = 31/268 (11%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
            F  +L     G   +      G     K +      T     D   E   +R    HPN
Sbjct: 13  NFLTKLNENHSGELWKG--RWQGNDIVVKVLKVRDWSTRK-SRDFNEECPRLRIF-SHPN 68

Query: 144 IVTYKEAYED--KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV---- 197
           ++    A +        L+      G L++ +    ++    + AV K  L + +     
Sbjct: 69  VLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAV-KFALDMARGMAFL 127

Query: 198 -CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
              E  +    L   + +     E+   +     +   F    Q    + +P ++APE L
Sbjct: 128 HTLEPLIPRHALNSRSVMI---DEDMTARISMADVKFSF----QSPGRMYAPAWVAPEAL 180

Query: 257 RR----NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE--RDPWPK- 309
           ++          D+WS  V+++ L+    PF       +++  I  K+  E  R   P  
Sbjct: 181 QKKPEDTNRRSADMWSFAVLLWELVTREVPF-----ADLSNMEIGMKVALEGLRPTIPPG 235

Query: 310 VSKEAKELVKNMLDPNPYNRLTLEEVLE 337
           +S    +L+K  ++ +P  R   + ++ 
Sbjct: 236 ISPHVSKLMKICMNEDPAKRPKFDMIVP 263

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score =  119 bits (301), Expect = 3e-30
 Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 13/210 (6%)

Query: 129 RREVEIMRHLPKHPNIVT-Y---KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAA 184
           RRE +    L  HP IV  Y   +         Y+VME  +G  L D +  +G  T + A
Sbjct: 60  RREAQNAAAL-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA 118

Query: 185 AAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE----Q 240
             V     + +   H+NG++HRD+KP N +    S  + +K +DFG++           Q
Sbjct: 119 IEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQ 175

Query: 241 FCEIVGSPYYMAPEVLRRNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK 299
              ++G+  Y++PE  R +      DV+S G ++Y +L G PPF  ++   +A+  +R  
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED 235

Query: 300 IDFERDPWPKVSKEAKELVKNMLDPNPYNR 329
                     +S +   +V   L  NP NR
Sbjct: 236 PIPPSARHEGLSADLDAVVLKALAKNPENR 265

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166

 Score =  114 bits (288), Expect = 5e-30
 Identities = 30/162 (18%), Positives = 50/162 (30%), Gaps = 25/162 (15%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIG---------------QKVSDPDVKML 428
           +   +I   F   D D NG +   +       +                   ++   + L
Sbjct: 1   EYERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGL 60

Query: 429 MEAADVDGNGLLSCDEFVTMSVHLKRIGNDD-------ILSQAFRFFDKNQSGFIEVDEL 481
              AD DG+  ++ +EFVT +V   R   D         L  A    D +  G + V + 
Sbjct: 61  AGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADT 120

Query: 482 KEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT 523
              L         +   R     +D D DG++   E      
Sbjct: 121 ARALTAFGVP---EDLARQAAAALDTDGDGKVGETEIVPAFA 159

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166

 Score = 57.8 bits (140), Expect = 5e-10
 Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 2/78 (2%)

Query: 371 KKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLME 430
            K LR   D   +     +     + DTD +G +T  +    L   G  V +   +    
Sbjct: 82  VKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLARQAAA 139

Query: 431 AADVDGNGLLSCDEFVTM 448
           A D DG+G +   E V  
Sbjct: 140 ALDTDGDGKVGETEIVPA 157

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109

 Score =  112 bits (283), Expect = 6e-30
 Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 6/111 (5%)

Query: 416 IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGF 475
           I   +S  D++  + +         +   F +  V L     D  + + F   D+++SGF
Sbjct: 3   ITDILSAKDIESALSS--CQAADSFNYKSFFST-VGLSSKTPDQ-IKKVFGILDQDKSGF 58

Query: 476 IEVDELKEVLLEDNAGPNG--DQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           IE +EL+  L   ++          +  L   D D DG+I  EEF++++ +
Sbjct: 59  IEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVKA 109

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109

 Score = 60.7 bits (148), Expect = 1e-11
 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKD---GLNMIGQKVSDPDVKMLMEAADVDGN 437
           L      QIK++F ++D DK+G +  EEL+      +   + ++  + K  + A D DG+
Sbjct: 36  LSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGD 95

Query: 438 GLLSCDEFVTM 448
           G +  +EF ++
Sbjct: 96  GKIGVEEFQSL 106

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151

 Score =  113 bits (284), Expect = 1e-29
 Identities = 31/150 (20%), Positives = 65/150 (43%), Gaps = 9/150 (6%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVD--GNG 438
             +DQ+ + K+ F + D   +G + + +  D +  +GQ  ++ +V  ++     D   + 
Sbjct: 4   FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSR 63

Query: 439 LLSCDEFVTMSVHLKRIGNDDI---LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-G 494
            +  + F+ M   + +           + FR FDK  +G +   EL+ VL     G    
Sbjct: 64  RVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLT--TLGEKMT 121

Query: 495 DQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           ++ +  +L     D +G I++E F   + S
Sbjct: 122 EEEVETVLAG-HEDSNGCINYEAFLKHILS 150

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  117 bits (296), Expect = 2e-29
 Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 42/226 (18%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
             G+ LG+G FG   +    ETGE    K++ +     E       +EV++MR L +HPN
Sbjct: 13  IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCL-EHPN 68

Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC----- 198
           ++ +         +  + E  +GG L   I +                 + V        
Sbjct: 69  VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQY---------PWSQRVSFAKDIAS 119

Query: 199 -----HENGVMHRDLKPENFLFADGSENSQLKAIDFGLS---------------IFFKPG 238
                H   ++HRDL   N L     EN  +   DFGL+               +     
Sbjct: 120 GMAYLHSMNIIHRDLNSHNCLV---RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDR 176

Query: 239 EQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPF 283
           ++   +VG+PY+MAPE++  R+Y  ++DV+S G+++  ++  V   
Sbjct: 177 KKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNAD 222

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score =  117 bits (295), Expect = 2e-29
 Identities = 62/269 (23%), Positives = 105/269 (39%), Gaps = 18/269 (6%)

Query: 69  SVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDV 128
              +   EG     Y   + +GRG  G  ++  +       A K      +   +  D V
Sbjct: 22  DGTAESREGTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKL-----MSETLSSDPV 76

Query: 129 -----RREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERA 183
                +RE      L + P++V   +  E    +Y+ M L  G +L   +  +G      
Sbjct: 77  FRTRMQREARTAGRL-QEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPR 135

Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE--QF 241
           A A+ + I   +   H  G  HRD+KPEN L    S +     +DFG++      +  Q 
Sbjct: 136 AVAIVRQIGSALDAAHAAGATHRDVKPENILV---SADDFAYLVDFGIASATTDEKLTQL 192

Query: 242 CEIVGSPYYMAPEVLRRNY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI 300
              VG+ YYMAPE    ++     D+++   ++Y  L G PP+  +    +  A I   I
Sbjct: 193 GNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS-VMGAHINQAI 251

Query: 301 DFERDPWPKVSKEAKELVKNMLDPNPYNR 329
                  P +      ++   +  NP +R
Sbjct: 252 PRPSTVRPGIPVAFDAVIARGMAKNPEDR 280

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  116 bits (293), Expect = 3e-29
 Identities = 64/274 (23%), Positives = 110/274 (40%), Gaps = 39/274 (14%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETY----ACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           T G+ +G G FG  ++         +    A K +      T   +   + EV ++R   
Sbjct: 27  TVGQRIGSGSFGTVYKG-------KWHGDVAVKML-NVTAPTPQQLQAFKNEVGVLRKT- 77

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK-VC 198
           +H NI+ +   Y     + +V + CEG  L+  +       E       K ++ I +   
Sbjct: 78  RHVNILLFM-GYSTAPQLAIVTQWCEGSSLYHHLHASETKFEM------KKLIDIARQTA 130

Query: 199 ------HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE---QFCEIVGSPY 249
                 H   ++HRDLK  N       E++ +K  DFGL+          QF ++ GS  
Sbjct: 131 RGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187

Query: 250 YMAPEVLRRN----YGPEIDVWSAGVIIYILLCGVPPFWAET-EEGIAHAIIRGKIDFER 304
           +MAPEV+R      Y  + DV++ G+++Y L+ G  P+      + I   + RG +  + 
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDL 247

Query: 305 DPWPK-VSKEAKELVKNMLDPNPYNRLTLEEVLE 337
                   K  K L+   L      R +   +L 
Sbjct: 248 SKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149

 Score =  111 bits (280), Expect = 5e-29
 Identities = 28/150 (18%), Positives = 66/150 (44%), Gaps = 9/150 (6%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVD--GNG 438
             +      K+ F + D   +  +T  ++ D    +GQ  ++ ++  ++     +     
Sbjct: 2   FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAA 61

Query: 439 LLSCDEFVTM---SVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-G 494
            ++ +EF+ M   + + K  G  +   +  R FDK  +G +   EL+ VL     G    
Sbjct: 62  AITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLA--TLGEKMT 119

Query: 495 DQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           ++ + ++++  + D +G I++E F   + S
Sbjct: 120 EEEVEELMKGQE-DSNGCINYEAFVKHIMS 148

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score =  114 bits (287), Expect = 7e-29
 Identities = 34/172 (19%), Positives = 60/172 (34%), Gaps = 28/172 (16%)

Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPD----------VKML 428
                   A   Q++   D D NG +  +EL D    + +K+   D           K  
Sbjct: 3   SAFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSF 62

Query: 429 MEAADVDGNGLLSCDEFVTM-----------SVHLKRIGNDDILSQAFRFFDKNQSGFIE 477
           M A D   +G L  +E   M                 + N     + +R +D + SG+I 
Sbjct: 63  MSAYDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYIS 122

Query: 478 VDELKEVLLEDNAGPNG-------DQTIRDILRDVDLDRDGRISFEEFKAMM 522
             ELK  L +              D+    +++  D ++DGR+   +   ++
Sbjct: 123 AAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARIL 174

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score =  100 bits (250), Expect = 8e-24
 Identities = 27/187 (14%), Positives = 68/187 (36%), Gaps = 27/187 (14%)

Query: 364 SIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVS-- 421
           +++   ++  L +     P D   +  +++   D D +G ++  ELK+ L  +  +    
Sbjct: 81  NMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKK 140

Query: 422 ------DPDVKMLMEAADVDGNGLLSCDEFVTM------------SVHLKRIGNDDILSQ 463
                 D     +M+  D + +G L  ++   +                 ++       +
Sbjct: 141 IPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEK 200

Query: 464 AFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRD-------ILRDVDLDRDGRISFE 516
            F  +D +++G +E  E+   + +         +  D       +L   D+++DG+I   
Sbjct: 201 IFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKS 260

Query: 517 EFKAMMT 523
           E    + 
Sbjct: 261 ELALCLG 267

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score =  114 bits (288), Expect = 1e-28
 Identities = 31/261 (11%), Positives = 64/261 (24%), Gaps = 38/261 (14%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
           Y      G        Q  +       A   +  + +  +  + +       +  +   P
Sbjct: 33  YRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-DKP 91

Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG 202
            +    +    +    +V E   GG L +        +   A    +++       H  G
Sbjct: 92  GVARVLDVVHTRAGGLVVAEWIRGGSLQEVA--DTSPSPVGAIRAMQSLAAAADAAHRAG 149

Query: 203 VMHRDLKPENFLFA-DGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYG 261
           V      P     + DG     +                    +  P  M          
Sbjct: 150 VALSIDHPSRVRVSIDG----DVV-------------------LAYPATMPDA------N 180

Query: 262 PEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW---PKVSKEAKELV 318
           P+ D+   G  +Y LL    P              R       +P      +  +   + 
Sbjct: 181 PQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVA 240

Query: 319 KNMLDPNPYNRL--TLEEVLE 337
              +  +   R   TL  +++
Sbjct: 241 ARSVQGDGGIRSASTLLNLMQ 261

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score =  115 bits (289), Expect = 3e-28
 Identities = 69/346 (19%), Positives = 120/346 (34%), Gaps = 70/346 (20%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            + ++Y     LG G FG   +C +   G++    KI +   K     +  R E+ +++ 
Sbjct: 16  WLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKY---REAARLEINVLKK 72

Query: 138 LPKH-----PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKT 190
           + +         V   + +     + +  EL  G   F+ +       Y       +   
Sbjct: 73  IKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQ 131

Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGS----------------ENSQLKAIDFGLSIF 234
           +   ++  HEN + H DLKPEN LF +                  +N+ ++  DFG + F
Sbjct: 132 LCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF 191

Query: 235 FKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAH 293
               E    IV + +Y  PEV L   +    DVWS G I++    G   F          
Sbjct: 192 --DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 249

Query: 294 AIIR--GKID------------FERD--PWPKVSKEAK---------------------- 315
            + +  G I             F +    W + S + +                      
Sbjct: 250 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQ 309

Query: 316 --ELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSR 359
             +L++ ML+ +P  R+TL E L +P+                 SR
Sbjct: 310 LFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEERSFHTSRNPSR 355

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202

 Score =  110 bits (277), Expect = 4e-28
 Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 27/168 (16%)

Query: 380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGL 439
              Q  + ++   F  +D +K G L+  +L+     IG    +P    ++E+   DG+  
Sbjct: 22  GFSQASLLRLHHRFRALDRNKKGYLSRMDLQQ----IGALAVNPLGDRIIESFFPDGSQR 77

Query: 440 LSCDEFVTMSVHLKRIGNDDI-----------------LSQAFRFFDKNQSGFIEVDELK 482
           +    FV +  H + + ++D                  L  AF+ +D ++ G I   E+ 
Sbjct: 78  VDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEML 137

Query: 483 EVLLEDNAGPNG-----DQTIRDILRDVDLDRDGRISFEEFKAMMTSG 525
           +VL     G        +      +++ D D DG +SF EF   +   
Sbjct: 138 QVL-RLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKM 184

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score =  115 bits (289), Expect = 4e-28
 Identities = 78/340 (22%), Positives = 127/340 (37%), Gaps = 87/340 (25%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           ++L KY   K+LG+G +GI  +  +  TGE  A KKI     +   D     RE+ I+  
Sbjct: 6   HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFD-AFQNSTDAQRTFREIMILTE 64

Query: 138 LPKHPNIVTYKEAY--EDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILR 193
           L  H NIV        ++   +YLV +  E     D   ++            V   +++
Sbjct: 65  LSGHENIVNLLNVLRADNDRDVYLVFDYMET----DLHAVIRANILEPVHKQYVVYQLIK 120

Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP----- 248
           ++K  H  G++HRD+KP N L    +    +K  DFGLS  F    +    +        
Sbjct: 121 VIKYLHSGGLLHRDMKPSNILL---NAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177

Query: 249 -----------------YYMAPEVL--RRNYGPEIDVWSAG------------------- 270
                            +Y APE+L     Y   ID+WS G                   
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237

Query: 271 ----VIIYILLCGVPPFWAETEEGI----AHAIIRG-----KIDF--------------- 302
                II ++    P    E  E I    A  +I       +I                 
Sbjct: 238 NQLERIIGVI--DFPS--NEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLL 293

Query: 303 ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
           + +P    ++EA +L+  +L  NP  R++  + L++P++ 
Sbjct: 294 KINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVS 333

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score =  115 bits (290), Expect = 5e-28
 Identities = 75/367 (20%), Positives = 132/367 (35%), Gaps = 123/367 (33%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAK--EKLKTEIDIDDVR--REVE 133
           ++ D Y     +GRG +G  +  ++  T +  A KK+ +  E L     ID  R  RE+ 
Sbjct: 23  HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDL-----IDCKRILREIT 77

Query: 134 IMRHLPKHPNIVTYK-----EAYEDKDAIYLVMELCEGGELFD--RIVNKG------HYT 180
           I+  L K   I+        +     D +Y+V+E+ +     D  ++          H  
Sbjct: 78  ILNRL-KSDYIIRLYDLIIPDDLLKFDELYIVLEIADS----DLKKLFKTPIFLTEEHI- 131

Query: 181 ERAAAAVGKT----ILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK 236
                   KT    +L      HE+G++HRDLKP N L    +++  +K  DFGL+    
Sbjct: 132 --------KTILYNLLLGENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLARTIN 180

Query: 237 PGEQFCEIVGSP-----------------------YYMAPEVL--RRNYGPEIDVWSAGV 271
             +    +                           +Y APE++  + NY   ID+WS G 
Sbjct: 181 SEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGC 240

Query: 272 IIYILLCGVPPFWAE--------------------------------------------T 287
           I   LL  +     +                                            T
Sbjct: 241 IFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPT 300

Query: 288 EEGI-------AHAIIRGKIDFERDPW----PKVSKEAKELVKNMLDPNPYNRLTLEEVL 336
           E+ +           I+     +        P +S +   L+++ML  NP  R+T+++ L
Sbjct: 301 EDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQAL 360

Query: 337 ENPWIKN 343
           ++P++K+
Sbjct: 361 DHPYLKD 367

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140

 Score =  107 bits (271), Expect = 6e-28
 Identities = 29/145 (20%), Positives = 63/145 (43%), Gaps = 11/145 (7%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
              +  KQ F + D    G +    + D L   GQ  +  ++       +      +  +
Sbjct: 2   TDDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEIT----EIESTLPAEVDME 57

Query: 444 EFVTM---SVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-GDQTIR 499
           +F+ +          G+ +   + F+ FDK+ +G I V EL+ VL   + G    ++ + 
Sbjct: 58  QFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLT--SLGEKLSNEEMD 115

Query: 500 DILRDVDLDRDGRISFEEFKAMMTS 524
           ++L+ V +  DG +++ +F  M+ +
Sbjct: 116 ELLKGVPVK-DGMVNYHDFVQMILA 139

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140

 Score = 51.0 bits (123), Expect = 5e-08
 Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSC 442
                +  + F + D D  G +   EL+  L  +G+K+S+ ++  L++   V  +G+++ 
Sbjct: 72  PGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNY 130

Query: 443 DEFVTM 448
            +FV M
Sbjct: 131 HDFVQM 136

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score =  115 bits (290), Expect = 6e-28
 Identities = 75/327 (22%), Positives = 122/327 (37%), Gaps = 71/327 (21%)

Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
           +  +Y   K +G+G FG   + ++ +  +  A K +  EK            E+ I+ HL
Sbjct: 95  VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK----RFHRQAAEEIRILEHL 150

Query: 139 PKHP-----NIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGH-YTERAAAAVGKTI 191
            K       N++   E +  ++ I +  EL     L++ I  NK   ++         +I
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSI 209

Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
           L+ +   H+N ++H DLKPEN L       S +K IDFG S +    ++    + S +Y 
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQ-QGRSGIKVIDFGSSCY--EHQRVYTYIQSRFYR 266

Query: 252 APEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR--GKID------- 301
           APEV L   YG  ID+WS G I+  LL G P    E E      +I   G          
Sbjct: 267 APEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDAS 326

Query: 302 ------FERDPWPKVSKEAKE--------------------------------------- 316
                      +P+                                              
Sbjct: 327 KRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFL 386

Query: 317 -LVKNMLDPNPYNRLTLEEVLENPWIK 342
             +K  L+ +P  R+T  + L +PW++
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR 413

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229

 Score =  110 bits (277), Expect = 7e-28
 Identities = 34/185 (18%), Positives = 76/185 (41%), Gaps = 14/185 (7%)

Query: 350 VSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEEL 409
             L  +V   ++  ++ ++ +   L        + ++  + + F   +   +G +  E  
Sbjct: 30  AGLEDSVEDELEMATVRHRPEALELLEAQSKFTKKELQILYRGF--KNECPSGVVNEETF 87

Query: 410 KDGL-NMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFF 468
           K+       Q  S      L  A D D NG +S ++F+     L R    + L+ AF  +
Sbjct: 88  KEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLY 147

Query: 469 DKNQSGFIEVDELKEVL--LEDNAGPNGDQTIRD---------ILRDVDLDRDGRISFEE 517
           D N+ G+I  +E+ +++  + D  G      +++           + +D ++DG ++ +E
Sbjct: 148 DINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDE 207

Query: 518 FKAMM 522
           F    
Sbjct: 208 FIESC 212

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229

 Score = 51.0 bits (122), Expect = 3e-07
 Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 14/130 (10%)

Query: 371 KKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLME 430
           K++             A    +F   DTD NG ++FE+   GL+++ +      +     
Sbjct: 88  KEIYSQFFPQGDSTTYAH--FLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFN 145

Query: 431 AADVDGNGLLSCDEFVTM------------SVHLKRIGNDDILSQAFRFFDKNQSGFIEV 478
             D++ +G ++ +E + +               LK       +   F+  DKN+ G + +
Sbjct: 146 LYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTI 205

Query: 479 DELKEVLLED 488
           DE  E   +D
Sbjct: 206 DEFIESCQKD 215

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score =  113 bits (285), Expect = 9e-28
 Identities = 76/329 (23%), Positives = 118/329 (35%), Gaps = 70/329 (21%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
            +  +Y     LG G FG   +C + + G  +   KI K   +     +  R E++++ H
Sbjct: 11  VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRY---CEAARSEIQVLEH 67

Query: 138 LPKH-----PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKT 190
           L           V   E +E    I +V EL  G   +D I   G   +       +   
Sbjct: 68  LNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQ 126

Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGS----------------ENSQLKAIDFGLSIF 234
           I + V   H N + H DLKPEN LF                     N  +K +DFG + +
Sbjct: 127 ICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY 186

Query: 235 FKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAH 293
               E    +V + +Y APEV L   +    DVWS G I+     G   F     +    
Sbjct: 187 --DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA 244

Query: 294 AIIR--GKID------------FERD--PWPKVSKEAK---------------------- 315
            + R  G +             F  D   W + S   +                      
Sbjct: 245 MMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHER 304

Query: 316 --ELVKNMLDPNPYNRLTLEEVLENPWIK 342
             +L++ ML+ +P  R+TL E L++P+  
Sbjct: 305 LFDLIQKMLEYDPAKRITLREALKHPFFD 333

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108

 Score =  106 bits (266), Expect = 1e-27
 Identities = 35/111 (31%), Positives = 49/111 (44%), Gaps = 6/111 (5%)

Query: 416 IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGF 475
           +   +S  D+   +   D       S  +F  +S   K+  +   L + FR  D +QSGF
Sbjct: 2   LTDILSPSDIAAALR--DCQAPDSFSPKKFFQISGMSKK--SSSQLKEIFRILDNDQSGF 57

Query: 476 IEVDELKEVL--LEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           IE DELK  L   E  A        +  L   D D DG+I  EEF+ M+ S
Sbjct: 58  IEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQS 108

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108

 Score = 90.8 bits (226), Expect = 3e-22
 Identities = 22/96 (22%), Positives = 49/96 (51%), Gaps = 4/96 (4%)

Query: 356 VTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGL-- 413
           + + ++     + F  K    ++  + +   +Q+K++F ++D D++G +  +ELK  L  
Sbjct: 11  IAAALRDCQAPDSFSPKKFFQISG-MSKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQR 69

Query: 414 -NMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
                + ++  + K  + AAD DG+G +  +EF  M
Sbjct: 70  FESGARVLTASETKTFLAAADHDGDGKIGAEEFQEM 105

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  112 bits (283), Expect = 2e-27
 Identities = 65/337 (19%), Positives = 119/337 (35%), Gaps = 80/337 (23%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEIDIDDVRREVEIMR 136
            + + +   +++G G FG    C  I+  + YA K +   +K          + E +I++
Sbjct: 32  LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYT-----RSAKIEADILK 86

Query: 137 HLPKHP----NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKT 190
            +        NIV Y   +   D + L+ E   G  L++ I    +  +           
Sbjct: 87  KIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIE 145

Query: 191 ILRIVKVCHENGVMHRDLKPENFLFADGS----------------------ENSQLKAID 228
           IL+ +    +  + H DLKPEN L  D                        +++ +K ID
Sbjct: 146 ILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLID 205

Query: 229 FGLSIFFKPGEQFCEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAET 287
           FG + F    +    I+ +  Y APEV L   +    D+WS G ++  L  G   F    
Sbjct: 206 FGCATF--KSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHE 263

Query: 288 E-EGIAHAI-IRGKID---------------FERDP----WPKVSKEAK----------- 315
             E +A    I   I                  +D     WP+ +               
Sbjct: 264 HMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPL 323

Query: 316 ----------ELVKNMLDPNPYNRLTLEEVLENPWIK 342
                     + + ++L  +P  R +  E+L++ +++
Sbjct: 324 YKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146

 Score =  106 bits (267), Expect = 2e-27
 Identities = 26/150 (17%), Positives = 57/150 (38%), Gaps = 10/150 (6%)

Query: 376 VVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVD 435
           V      ++++ +     Y  +    G ++ +        +G   S  D K + E     
Sbjct: 4   VADIQQLEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKE----L 59

Query: 436 GNGLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN- 493
               L+ ++++  +S+ +    N + L + F  FD N +G++   ++K +L     G   
Sbjct: 60  YGDNLTYEQYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILT--TWGDAL 117

Query: 494 GDQTIRDILRDVDLDRDGRISFEEFKAMMT 523
            DQ   D L       +  I ++ F   + 
Sbjct: 118 TDQEAIDALNAF--SSEDNIDYKLFCEDIL 145

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146

 Score = 51.1 bits (123), Expect = 6e-08
 Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 2/70 (2%)

Query: 382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLS 441
            +D + ++ +MF   D +  G LT  ++K+ L   G  ++D +    + A   + N  + 
Sbjct: 79  DKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAFSSEDN--ID 136

Query: 442 CDEFVTMSVH 451
              F    + 
Sbjct: 137 YKLFCEDILQ 146

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87

 Score =  103 bits (260), Expect = 4e-27
 Identities = 30/77 (38%), Positives = 56/77 (72%)

Query: 375 RVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADV 434
           + +A+ L ++++  +K++F M+DTD +G +TF+ELKDGL  +G ++ + ++K LM+AAD+
Sbjct: 11  KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70

Query: 435 DGNGLLSCDEFVTMSVH 451
           D +G +   EF+  +VH
Sbjct: 71  DKSGTIDYGEFIAATVH 87

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87

 Score = 70.2 bits (173), Expect = 2e-15
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 7/90 (7%)

Query: 435 DGNGLLSCDEFVTMSVHLKRIGNDDI--LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGP 492
             +G +  D+   M+  L     ++I  L + F+  D + SG I  DELK+ L    +  
Sbjct: 1   HSSGHIDDDDKH-MAERLS---EEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSEL 56

Query: 493 NGDQTIRDILRDVDLDRDGRISFEEFKAMM 522
             +  I+D++   D+D+ G I + EF A  
Sbjct: 57  M-ESEIKDLMDAADIDKSGTIDYGEFIAAT 85

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173

 Score =  107 bits (268), Expect = 4e-27
 Identities = 28/147 (19%), Positives = 65/147 (44%), Gaps = 17/147 (11%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPD--------VKMLMEAADVD 435
           +++ Q +++F  +  D + +++  EL + LN +  +  D           + ++   D D
Sbjct: 1   EEVRQFRRLFAQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59

Query: 436 GNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGD 495
             G L  +EF  +  ++K+          ++ FD ++SG I   EL      + AG + +
Sbjct: 60  TTGKLGFEEFKYLWNNIKK------WQAIYKQFDVDRSGTIGSSELPGAF--EAAGFHLN 111

Query: 496 QTIRDILRDVDLDRDGRISFEEFKAMM 522
           + +  ++     D  G + F+ F + +
Sbjct: 112 EHLYSMIIRRYSDEGGNMDFDNFISCL 138

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173

 Score = 77.8 bits (192), Expect = 6e-17
 Identities = 20/103 (19%), Positives = 46/103 (44%), Gaps = 7/103 (6%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
           + + + + ++   D D++G +   EL       G  ++   +  ++     D  G +  D
Sbjct: 74  NNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLN-EHLYSMIIRRYSDEGGNMDFD 132

Query: 444 EFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLL 486
            F++  V L        + +AF+  DK+ +G I+V+  + + L
Sbjct: 133 NFISCLVRLDA------MFRAFKSLDKDGTGQIQVNIQEWLQL 169

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173

 Score = 54.3 bits (131), Expect = 8e-09
 Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 8/88 (9%)

Query: 457 NDDILSQAFRFFDKNQSGFIEVDELKEVL-------LEDNAGPNGDQTIRDILRDVDLDR 509
                 + F          +   EL  +L        +      G  T R ++  +D D 
Sbjct: 2   EVRQFRRLFAQLAG-DDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDT 60

Query: 510 DGRISFEEFKAMMTSGADWKMASRQYSR 537
            G++ FEEFK +  +   W+   +Q+  
Sbjct: 61  TGKLGFEEFKYLWNNIKKWQAIYKQFDV 88

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score =  112 bits (283), Expect = 6e-27
 Identities = 64/293 (21%), Positives = 110/293 (37%), Gaps = 68/293 (23%)

Query: 26  NTASTNNKRNDASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTF 85
           +  +   +++++ ++      + E   +   +  K + S              I D+Y  
Sbjct: 3   SHEAAAAQQHNSGTQHTVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQ-----IPDRYEI 57

Query: 86  GKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR--REVEIMRHLPKHPN 143
              +G G +G   + ++       A KKI +     E  ID  R  RE+ I+  L  H +
Sbjct: 58  RHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV---FEDLIDCKRILREIAILNRL-NHDH 113

Query: 144 IVT-----YKEAYEDKDAIYLVMELCE---------GGELFDRIVNKGHYTERAAAAVGK 189
           +V        +  E  D +Y+V+E+ +            L +  +    Y          
Sbjct: 114 VVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLY---------- 163

Query: 190 TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSP 248
            +L  VK  H  G++HRDLKP N L    +++  +K  DFGL+     P     ++  SP
Sbjct: 164 NLLVGVKYVHSAGILHRDLKPANCLV---NQDCSVKVCDFGLARTVDYPENGNSQLPISP 220

Query: 249 ---------------------------YYMAPEVL--RRNYGPEIDVWSAGVI 272
                                      +Y APE++  + NY   IDVWS G I
Sbjct: 221 REDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCI 273

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score =  108 bits (272), Expect = 2e-26
 Identities = 60/298 (20%), Positives = 107/298 (35%), Gaps = 57/298 (19%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI--MRHLPKH 141
           T  + +G+G +G   +      GE  A K  +        D     RE E+     L +H
Sbjct: 11  TLLECVGKGRYGEVWRG--SWQGENVAVKIFSSR------DEKSWFRETELYNTVML-RH 61

Query: 142 PNIVTY----KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILR---- 193
            NI+ +      +      ++L+    E G L+D  +        +   +  +I      
Sbjct: 62  ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYD-YLQLTTLDTVSCLRIVLSIASGLAH 120

Query: 194 ----IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI----- 244
               I     +  + HRDLK +N L     +N Q    D GL++         ++     
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILV---KKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177

Query: 245 VGSPYYMAPEVLR-------RNYGPEIDVWSAGVIIYILLCGV----------PPFWAET 287
           VG+  YMAPEVL         +    +D+W+ G++++ +   +          PPF+   
Sbjct: 178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237

Query: 288 EEGIAHAIIRGKIDFE--RDPWPK------VSKEAKELVKNMLDPNPYNRLTLEEVLE 337
               +   +R  +  +  R   P             +L+K     NP  RLT   + +
Sbjct: 238 PNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208

 Score =  105 bits (264), Expect = 2e-26
 Identities = 36/180 (20%), Positives = 68/180 (37%), Gaps = 28/180 (15%)

Query: 366 MNKFKKKVLRVVAD--NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDP 423
               + + L  +         Q+ ++   F  +D  +NG L+ E+ +     I +   +P
Sbjct: 6   STLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQR----IPELAINP 61

Query: 424 DVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDI----------------LSQAFRF 467
               ++ A   +G   ++   F+    H + I +++                 L  AFR 
Sbjct: 62  LGDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRL 121

Query: 468 FDKNQSGFIEVDELKEVLLEDNAGPNGD-----QTIRDILRDVDLDRDGRISFEEFKAMM 522
           +D ++   I  DEL +VL     G N             +++ D D D  ISF EF  ++
Sbjct: 122 YDLDKDDKISRDELLQVL-RMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score =  108 bits (271), Expect = 5e-26
 Identities = 60/303 (19%), Positives = 107/303 (35%), Gaps = 57/303 (18%)

Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI--MR 136
           I       + +G+G FG   +      GE  A K  +        +     RE EI    
Sbjct: 40  IARTIVLQESIGKGRFGEVWRG--KWRGEEVAVKIFSSR------EERSWFREAEIYQTV 91

Query: 137 HLPKHPNIVTYKEAYEDKDA----IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
            L +H NI+ +  A    +     ++LV +  E G LFD  +N+   T      +  +  
Sbjct: 92  ML-RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFD-YLNRYTVTVEGMIKLALSTA 149

Query: 193 R--------IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI 244
                    IV    +  + HRDLK +N L     +N      D GL++         +I
Sbjct: 150 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTIDI 206

Query: 245 -----VGSPYYMAPEVLRRNYGPE-------IDVWSAGVIIYILLCGV----------PP 282
                VG+  YMAPEVL  +   +        D+++ G++ + +               P
Sbjct: 207 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266

Query: 283 FWAETEEGIAHAIIRGKIDFE--RDPWPK------VSKEAKELVKNMLDPNPYNRLTLEE 334
           ++       +   +R  +  +  R   P         +   ++++     N   RLT   
Sbjct: 267 YYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALR 326

Query: 335 VLE 337
           + +
Sbjct: 327 IKK 329

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score =  107 bits (269), Expect = 8e-26
 Identities = 58/303 (19%), Positives = 108/303 (35%), Gaps = 57/303 (18%)

Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI--MR 136
           I  +    K++G+G +G          GE  A K           +     RE EI    
Sbjct: 35  IAKQIQMVKQIGKGRYGEVWMG--KWRGEKVAVKVFFTT------EEASWFRETEIYQTV 86

Query: 137 HLPKHPNIVTY----KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
            + +H NI+ +     +       +YL+ +  E G L+D  +       ++   +  + +
Sbjct: 87  LM-RHENILGFIAADIKGTGSWTQLYLITDYHENGSLYD-YLKSTTLDAKSMLKLAYSSV 144

Query: 193 R--------IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI 244
                    I     +  + HRDLK +N L     +N      D GL++ F       +I
Sbjct: 145 SGLCHLHTEIFSTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVKFISDTNEVDI 201

Query: 245 -----VGSPYYMAPEVLRRNYGPE-------IDVWSAGVIIYILLCGV----------PP 282
                VG+  YM PEVL  +            D++S G+I++ +               P
Sbjct: 202 PPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261

Query: 283 FWAETEEGIAHAIIRGKIDFER------DPWPKVS--KEAKELVKNMLDPNPYNRLTLEE 334
           +        ++  +R  +  ++      + W      ++  +L+      NP +RLT   
Sbjct: 262 YHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALR 321

Query: 335 VLE 337
           V +
Sbjct: 322 VKK 324

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191

 Score =  103 bits (259), Expect = 1e-25
 Identities = 21/173 (12%), Positives = 51/173 (29%), Gaps = 28/173 (16%)

Query: 376 VVADNLPQDQMAQIKQMF-YMMDTDKNGDLTFEELKDGLNMI----GQKVSDPDVKM--- 427
           + A  L   Q  +I ++F    D + +G + +++ +  +  I                  
Sbjct: 1   MAAHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARA 60

Query: 428 --------LMEAADVDGNGLLSCDEFVTMSVHLKRIGNDD---------ILSQAFRFFDK 470
                   L + AD + +  ++ +E++ M     +               ++  F   D 
Sbjct: 61  TLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDT 120

Query: 471 NQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT 523
           +    I+  E   V +                  +       ++ E F  + T
Sbjct: 121 SGDNIIDKHEYSTVYMSYGIP---KSDCDAAFDTLSDGGKTMVTREIFARLWT 170

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191

 Score = 57.9 bits (140), Expect = 7e-10
 Identities = 13/120 (10%), Positives = 32/120 (26%), Gaps = 13/120 (10%)

Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPD---------VKML 428
            +            +    D +++  +T EE         + V   +         +  +
Sbjct: 55  HNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFM 114

Query: 429 MEAADVDGNGLLSCDEFVTMSVHLKRIG-NDDILSQAFRFFDKNQSGFIEVDELKEVLLE 487
            +  D  G+ ++   E+ T+       G        AF          +  +    +  E
Sbjct: 115 FDVNDTSGDNIIDKHEYSTV---YMSYGIPKSDCDAAFDTLSDGGKTMVTREIFARLWTE 171

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190

 Score =  102 bits (257), Expect = 2e-25
 Identities = 31/173 (17%), Positives = 62/173 (35%), Gaps = 16/173 (9%)

Query: 366 MNKFKKKVLRVVAD--NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVS-D 422
            +K  +  L+ +       + ++ Q  + F       +G L   E +             
Sbjct: 5   QSKLSQDQLQDLVRSTRFDKKELQQWYKGF--FKDCPSGHLNKSEFQKIYKQFFPFGDPS 62

Query: 423 PDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELK 482
              + +    D D NG +   EF+       R   +D L  AF+ +D + +G I  DE+ 
Sbjct: 63  AFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEML 122

Query: 483 EVL------LEDNAGPNGD-----QTIRDILRDVDLDRDGRISFEEFKAMMTS 524
            ++      +        D     + +  I   +D ++DG+++ EEF      
Sbjct: 123 RIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKR 175

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190

 Score = 52.9 bits (127), Expect = 3e-08
 Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 14/130 (10%)

Query: 371 KKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLME 430
           +K+ +           A+   +F + D DKNG + F+E    L++  +   +  +    +
Sbjct: 49  QKIYKQFFPFGDPSAFAE--YVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQ 106

Query: 431 AADVDGNGLLSCDEFVTM------------SVHLKRIGNDDILSQAFRFFDKNQSGFIEV 478
             D+D NGL+S DE + +             +       +  +++ F   DKN+ G + +
Sbjct: 107 LYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTL 166

Query: 479 DELKEVLLED 488
           +E  E    D
Sbjct: 167 EEFCEGSKRD 176

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109

 Score =  100 bits (250), Expect = 2e-25
 Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 4/104 (3%)

Query: 348 PNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFE 407
            ++    ++   I  F+  + F  K    +   L +     +K++F+++D DK+G +  +
Sbjct: 3   TDLLSAEDIKKAIGAFTAADSFDHKKFFQMV-GLKKKSADDVKKVFHILDKDKSGFIEED 61

Query: 408 ELKDGL---NMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
           EL   L   +   + +S  + K LM A D DG+G +  +EF T+
Sbjct: 62  ELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTL 105

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109

 Score = 91.6 bits (228), Expect = 2e-22
 Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 6/111 (5%)

Query: 416 IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGF 475
           +   +S  D+K  + A     +      +F  M V LK+   DD + + F   DK++SGF
Sbjct: 2   MTDLLSAEDIKKAIGAFTAADS--FDHKKFFQM-VGLKKKSADD-VKKVFHILDKDKSGF 57

Query: 476 IEVDELKEVL--LEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           IE DEL  +L     +A     +  + ++   D D DG+I  EEF  ++  
Sbjct: 58  IEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score =  106 bits (266), Expect = 4e-25
 Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 20/221 (9%)

Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKI-AKEKLKTEIDIDDVRREVEIMRH 137
            +D+Y     +G+G FG   + ++    E  A K I  K+        +  + EV ++  
Sbjct: 52  WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFL-----NQAQIEVRLLEL 106

Query: 138 LPKHP-----NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKT 190
           + KH       IV  K  +  ++ + LV E+     L+D + N      +        + 
Sbjct: 107 MNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQ 165

Query: 191 ILRIVKVCHEN--GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
           +   +         ++H DLKPEN L  +  + S +K +DFG S     G++  + + S 
Sbjct: 166 MCTALLFLATPELSIIHCDLKPENILLCN-PKRSAIKIVDFGSSCQL--GQRIYQYIQSR 222

Query: 249 YYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETE 288
           +Y +PEV L   Y   ID+WS G I+  +  G P F    E
Sbjct: 223 FYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193

 Score =  101 bits (253), Expect = 6e-25
 Identities = 33/172 (19%), Positives = 70/172 (40%), Gaps = 16/172 (9%)

Query: 367 NKFKKKVLRVVAD--NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVS-DP 423
           +K + +V++ + +  +  + ++ +  + F  +    +G L+ EE K              
Sbjct: 6   SKLRPEVMQDLLESTDFTEHEIQEWYKGF--LRDCPSGHLSMEEFKKIYGNFFPYGDASK 63

Query: 424 DVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKE 483
             + +    D +G+G +   EF+       R   +  L  AF  +D + +G+I   E+ E
Sbjct: 64  FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLE 123

Query: 484 VLLEDNAGPNG-----------DQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           ++       +            ++    I R +D +RDG++S EEF     S
Sbjct: 124 IVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS 175

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193

 Score = 52.9 bits (127), Expect = 3e-08
 Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 14/130 (10%)

Query: 371 KKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLME 430
           KK+           + A+   +F   D + +G + F E    L++  +   +  +K    
Sbjct: 49  KKIYGNFFPYGDASKFAE--HVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFS 106

Query: 431 AADVDGNGLLSCDEFVTMSVHLKRIGN------------DDILSQAFRFFDKNQSGFIEV 478
             D+DGNG +S  E + +   + ++ +            +    + FR  D N+ G + +
Sbjct: 107 MYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSL 166

Query: 479 DELKEVLLED 488
           +E       D
Sbjct: 167 EEFIRGAKSD 176

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256

 Score =  102 bits (255), Expect = 1e-24
 Identities = 40/253 (15%), Positives = 83/253 (32%), Gaps = 31/253 (12%)

Query: 284 WAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
             E  +        G +  +    P   +E+ +  +         R  L       WI +
Sbjct: 4   TKEAVKASD-----GNLLGDPGRIPLSKRESIKWQRPRFTRQALMRCCLI-----KWILS 53

Query: 344 DNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVAD--NLPQDQMAQIKQMFYMMDTDKN 401
                      +            + + + L  +       + ++  + + F        
Sbjct: 54  SAAPQGSDSSDSELELSTV-----RHQPEGLDQLQAQTKFTKKELQSLYRGFKNEC--PT 106

Query: 402 GDLTFEELKDGLNMI-GQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDI 460
           G +  +  K   +    Q  +      L  A D DGNG +  ++FV     L R    + 
Sbjct: 107 GLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEK 166

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVL--LEDNAGPNGDQTIRD---------ILRDVDLDR 509
           L  AF  +D N+ G I  +E+  ++  + D  G +    +R+           + +D ++
Sbjct: 167 LKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQ 226

Query: 510 DGRISFEEFKAMM 522
           DG ++ +EF    
Sbjct: 227 DGVVTIDEFLETC 239

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256

 Score = 50.0 bits (119), Expect = 7e-07
 Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 14/130 (10%)

Query: 371 KKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLME 430
           K +             A    +F   D D NG + FE+   GL+++ +      +K    
Sbjct: 115 KLIYSQFFPQGDATTYAH--FLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFN 172

Query: 431 AADVDGNGLLSCDEFVTM------------SVHLKRIGNDDILSQAFRFFDKNQSGFIEV 478
             D++ +G ++ +E + +               L+     + + + F+  D+NQ G + +
Sbjct: 173 LYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTI 232

Query: 479 DELKEVLLED 488
           DE  E   +D
Sbjct: 233 DEFLETCQKD 242

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score =  105 bits (263), Expect = 1e-24
 Identities = 62/327 (18%), Positives = 117/327 (35%), Gaps = 72/327 (22%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL--- 138
           +Y   ++LG G F       ++      A K +  +K+ TE   D    E+++++ +   
Sbjct: 20  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAED----EIKLLQRVNDA 75

Query: 139 -------PKHPNIVTYKEAYEDKDAIY----LVMELCEGGELFDRIVNKGH--YTERAAA 185
                      +I+   + +  K        +V E+  G  L   I    H         
Sbjct: 76  DNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVK 134

Query: 186 AVGKTILRIVKVCH-ENGVMHRDLKPENFLFADGSEN---SQLKAIDFGLSIFFKPGEQF 241
            + K +L  +   H   G++H D+KPEN L           Q+K  D G + +    E +
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW--YDEHY 192

Query: 242 CEIVGSPYYMAPEV-LRRNYGPEIDVWSAGVIIYILLCGVPPF-------WAETEEGIAH 293
              + +  Y +PEV L   +G   D+WS   +I+ L+ G   F       + + ++ IA 
Sbjct: 193 TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ 252

Query: 294 AI-IRGKID-------------FERDPWPKVSKEAK-----------------------E 316
            I + G++              F      +   + K                       +
Sbjct: 253 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISD 312

Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKN 343
            +  ML  +P  R     ++ +PW+K+
Sbjct: 313 FLSPMLQLDPRKRADAGGLVNHPWLKD 339

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167

 Score = 98.6 bits (246), Expect = 3e-24
 Identities = 30/142 (21%), Positives = 59/142 (41%), Gaps = 15/142 (10%)

Query: 386 MAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV-----SDPDVKMLMEAADVDGNGLL 440
           M  +   F  +   ++G +  +EL+  L   G        +    ++++   D D +G +
Sbjct: 1   MDPLYGYFASV-AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTM 59

Query: 441 SCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRD 500
             +EF  +   L          Q F  FD ++SG ++  EL++ L       N  QT+  
Sbjct: 60  GFNEFKELWAVLNG------WRQHFISFDSDRSGTVDPQELQKALTTMGFRLN-PQTVNS 112

Query: 501 ILRDVDLDRDGRISFEEFKAMM 522
           I +       G+I+F+++ A  
Sbjct: 113 IAKRY--STSGKITFDDYIACC 132

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167

 Score = 69.7 bits (171), Expect = 3e-14
 Identities = 20/97 (20%), Positives = 43/97 (44%), Gaps = 8/97 (8%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
             +   +Q F   D+D++G +  +EL+  L  +G +++   V  +        +G ++ D
Sbjct: 69  AVLNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIA--KRYSTSGKITFD 126

Query: 444 EFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDE 480
           +++   V L+       L+ +FR  D  Q G +    
Sbjct: 127 DYIACCVKLRA------LTDSFRRRDSAQQGMVNFSY 157

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167

 Score = 58.5 bits (142), Expect = 3e-10
 Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 6/79 (7%)

Query: 465 FRFFDK--NQSGFIEVDELKEVLLEDNAGPNGD----QTIRDILRDVDLDRDGRISFEEF 518
           + +F     Q G I+ DEL+  L +            +T R ++  +D D  G + F EF
Sbjct: 5   YGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEF 64

Query: 519 KAMMTSGADWKMASRQYSR 537
           K +      W+     +  
Sbjct: 65  KELWAVLNGWRQHFISFDS 83

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135

 Score = 97.4 bits (243), Expect = 4e-24
 Identities = 16/103 (15%), Positives = 36/103 (34%), Gaps = 1/103 (0%)

Query: 422 DPDVKMLMEAADVDGNGLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDE 480
           +P  K ++             ++ +  M+  +        L + F      +   I  + 
Sbjct: 2   EPTEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAES 61

Query: 481 LKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT 523
           L+             +  + ++R+ DLD DG ++  EF  +M 
Sbjct: 62  LRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMV 104

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135

 Score = 56.6 bits (137), Expect = 5e-10
 Identities = 14/67 (20%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIG-QKVSDPDVKMLMEAADVDGNGLLS 441
           ++ ++++ + F ++   +   +T E L+    ++G + +S  D + ++   D+DG+G L+
Sbjct: 36  EEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALN 95

Query: 442 CDEFVTM 448
             EF  +
Sbjct: 96  QTEFCVL 102

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 99.4 bits (248), Expect = 5e-23
 Identities = 68/300 (22%), Positives = 112/300 (37%), Gaps = 55/300 (18%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI--MRHL 138
                 +   RG FG   +       E  A K    +      D    + E E+  +  +
Sbjct: 24  MPLQLLEVKARGRFGCVWKA--QLLNEYVAVKIFPIQ------DKQSWQNEYEVYSLPGM 75

Query: 139 PKHPNIVTY----KEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGK---- 189
            KH NI+ +    K        ++L+    E G L D +  N   + E    A       
Sbjct: 76  -KHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGL 134

Query: 190 ----TILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEI- 244
                 +  +K  H+  + HRD+K +N L      N      DFGL++ F+ G+   +  
Sbjct: 135 AYLHEDIPGLKDGHKPAISHRDIKSKNVLL---KNNLTACIADFGLALKFEAGKSAGDTH 191

Query: 245 --VGSPYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCG-----------VPPFWA 285
             VG+  YMAPEVL       R+    ID+++ G++++ L              + PF  
Sbjct: 192 GQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEE 251

Query: 286 E-----TEEGIAHAIIRGKIDFE-RDPWPKVSKEAK--ELVKNMLDPNPYNRLTLEEVLE 337
           E     + E +   ++  K     RD W K +  A   E ++   D +   RL+   V E
Sbjct: 252 EIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE 311

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108

 Score = 93.1 bits (232), Expect = 5e-23
 Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 6/111 (5%)

Query: 416 IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGF 475
           I   +S  D+   ++             +F      L ++     +   FRF D +QSG+
Sbjct: 2   ITDILSAEDIAAALQECQDPDT--FEPQKFFQT-SGLSKMSASQ-VKDIFRFIDNDQSGY 57

Query: 476 IEVDELKEVL--LEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           ++ DELK  L   + +A    +   + ++   D D DG+I  +EF+ M+ S
Sbjct: 58  LDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVHS 108

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108

 Score = 90.8 bits (226), Expect = 3e-22
 Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 4/96 (4%)

Query: 356 VTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGL-- 413
           + + +++    + F+ +        L +   +Q+K +F  +D D++G L  +ELK  L  
Sbjct: 11  IAAALQECQDPDTFEPQKF-FQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQK 69

Query: 414 -NMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
                +++++ + K LM+AAD DG+G +  DEF  M
Sbjct: 70  FQSDARELTESETKSLMDAADNDGDGKIGADEFQEM 105

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198

 Score = 94.4 bits (235), Expect = 2e-22
 Identities = 29/149 (19%), Positives = 58/149 (38%), Gaps = 17/149 (11%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV-----SDPDVKMLMEAADVD 435
            P      +   F      ++G +  +EL+  L   G        +    ++++   D D
Sbjct: 27  FPGQTQDPLYGYF-AAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRD 85

Query: 436 GNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-G 494
            +G +  +EF  +   L          Q F  FD ++SG ++  EL++ L     G    
Sbjct: 86  MSGTMGFNEFKELWAVLNG------WRQHFISFDTDRSGTVDPQELQKAL--TTMGFRLS 137

Query: 495 DQTIRDILRDVDLDRDGRISFEEFKAMMT 523
            Q +  I +      +G+I+F+++ A   
Sbjct: 138 PQAVNSIAKRY--STNGKITFDDYIACCV 164

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198

 Score = 70.6 bits (173), Expect = 4e-14
 Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 8/96 (8%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
             +   +Q F   DTD++G +  +EL+  L  +G ++S   V  + +    +G   ++ D
Sbjct: 100 AVLNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYSTNGK--ITFD 157

Query: 444 EFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVD 479
           +++   V L+       L+ +FR  D  Q G +   
Sbjct: 158 DYIACCVKLRA------LTDSFRRRDTAQQGVVNFP 187

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198

 Score = 64.4 bits (157), Expect = 4e-12
 Identities = 20/84 (23%), Positives = 31/84 (36%), Gaps = 5/84 (5%)

Query: 456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGD----QTIRDILRDVDLDRDG 511
              D L   F      Q G I+ DEL+  L +            +T R ++  +D D  G
Sbjct: 30  QTQDPLYGYFAA-VAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSG 88

Query: 512 RISFEEFKAMMTSGADWKMASRQY 535
            + F EFK +      W+     +
Sbjct: 89  TMGFNEFKELWAVLNGWRQHFISF 112

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165

 Score = 90.1 bits (224), Expect = 2e-21
 Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 17/140 (12%)

Query: 389 IKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV-----SDPDVKMLMEAADVDGNGLLSCD 443
           +   F      ++G++  EEL+  L   G        S    ++++   D D  G +  +
Sbjct: 2   VYTYF-SAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFN 60

Query: 444 EFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-GDQTIRDIL 502
            F  +   L          + F   D++ SG +E  EL++ +     G     QT+  I+
Sbjct: 61  AFKELWAALNA------WKENFMTVDQDGSGTVEHHELRQAI--GLMGYRLSPQTLTTIV 112

Query: 503 RDVDLDRDGRISFEEFKAMM 522
           +     ++GRI F+++ A  
Sbjct: 113 KRY--SKNGRIFFDDYVACC 130

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165

 Score = 70.1 bits (172), Expect = 2e-14
 Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 8/97 (8%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
             +   K+ F  +D D +G +   EL+  + ++G ++S   +  +++    +G   +  D
Sbjct: 67  AALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGR--IFFD 124

Query: 444 EFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDE 480
           ++V   V L+       L+  FR  D  Q G      
Sbjct: 125 DYVACCVKLRA------LTDFFRKRDHLQQGSANFIY 155

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165

 Score = 60.8 bits (148), Expect = 3e-11
 Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 6/79 (7%)

Query: 465 FRFFDK--NQSGFIEVDELKEVL----LEDNAGPNGDQTIRDILRDVDLDRDGRISFEEF 518
           + +F     Q G ++ +EL+  L    +     P   +T R ++  +D D  G++ F  F
Sbjct: 3   YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAF 62

Query: 519 KAMMTSGADWKMASRQYSR 537
           K +  +   WK       +
Sbjct: 63  KELWAALNAWKENFMTVDQ 81

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 92.4 bits (230), Expect = 7e-21
 Identities = 54/219 (24%), Positives = 97/219 (44%), Gaps = 27/219 (12%)

Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
           + ++Y  G+++G G FG  +   +I  GE  A K    E +KT+     +  E +I + +
Sbjct: 7   VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL---ECVKTKHPQ--LHIESKIYKMM 61

Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFD-RIVNKGHYTERAAAAVGKTILRIVKV 197
                I T +    + D   +VMEL  G  L D        ++ +    +   ++  ++ 
Sbjct: 62  QGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEY 120

Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--------PGEQFCEIVGSPY 249
            H    +HRD+KP+NFL   G + + +  IDFGL+  ++        P  +   + G+  
Sbjct: 121 IHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTAR 180

Query: 250 YMAP------EVLRRNYGPEIDVWSAG-VIIYILLCGVP 281
           Y +       E  RR+     D+ S G V++Y  L  +P
Sbjct: 181 YASINTHLGIEQSRRD-----DLESLGYVLMYFNLGSLP 214

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185

 Score = 89.2 bits (221), Expect = 8e-21
 Identities = 20/167 (11%), Positives = 53/167 (31%), Gaps = 28/167 (16%)

Query: 381 LPQDQMAQIKQMF-YMMDTDKNGDLTFEELKDGLNMIG---------------QKVSDPD 424
           L   Q  +IK  F + +D + +G +   + +D +                   Q   + +
Sbjct: 2   LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61

Query: 425 VKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDD---------ILSQAFRFFDKNQSGF 475
            + L   AD++ + ++S +E++ M                     +   F+  D +  G 
Sbjct: 62  WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121

Query: 476 IEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM 522
           ++++E +               +  +   +            +K + 
Sbjct: 122 VDLEEFQNYCKNFQLQ---CADVPAVYNVITDGGKVTFDLNRYKELY 165

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185

 Score = 55.7 bits (134), Expect = 3e-09
 Identities = 12/70 (17%), Positives = 24/70 (34%), Gaps = 2/70 (2%)

Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
            +LP     +I  +F  MD   +G +  EE ++        +   DV  +       G  
Sbjct: 97  ADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYNVITDGGKV 154

Query: 439 LLSCDEFVTM 448
               + +  +
Sbjct: 155 TFDLNRYKEL 164

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185

 Score = 52.6 bits (126), Expect = 4e-08
 Identities = 14/112 (12%), Positives = 34/112 (30%), Gaps = 13/112 (11%)

Query: 386 MAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPD---------VKMLMEAADVDG 436
             + + +    D +K+  +++EE                         +  L +  DV G
Sbjct: 59  EDEWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSG 118

Query: 437 NGLLSCDEFVTMSVHLKRIG-NDDILSQAFRFFDKNQSGFIEVDELKEVLLE 487
           +G++  +EF       K        +   +           +++  KE+   
Sbjct: 119 DGIVDLEEFQNY---CKNFQLQCADVPAVYNVITDGGKVTFDLNRYKELYYR 167

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185

 Score = 50.7 bits (121), Expect = 2e-07
 Identities = 19/104 (18%), Positives = 38/104 (36%), Gaps = 16/104 (15%)

Query: 461 LSQAFR-FFDKNQSGFIEVDELKEVLLEDNAGPNGDQT--------------IRDILRDV 505
           +   F  F D N  G I+ ++ ++++        G  +               RD+    
Sbjct: 10  IKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRA 69

Query: 506 DLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSALSIKLFK 549
           D+++D  +S+EE+ AM         +         + +   LFK
Sbjct: 70  DINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIP-FLFK 112

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Length = 224

 Score = 90.4 bits (224), Expect = 9e-21
 Identities = 28/180 (15%), Positives = 67/180 (37%), Gaps = 14/180 (7%)

Query: 355 NVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGL- 413
            +   ++   + ++ +         N  + ++  + + F   +   +G +  E  K    
Sbjct: 22  KIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGF--KNECPSGVVNEETFKQIYA 79

Query: 414 NMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQS 473
                  +      L  A D    G +  ++FVT    L R    + L   F  +D N+ 
Sbjct: 80  QFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKD 139

Query: 474 GFIEVDELKEVL--LEDNAGPNGDQTIRD---------ILRDVDLDRDGRISFEEFKAMM 522
           G+I  +E+ +++  + D  G      +++           + +D ++DG ++ +EF    
Sbjct: 140 GYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESC 199

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Length = 224

 Score = 51.9 bits (124), Expect = 1e-07
 Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 14/130 (10%)

Query: 371 KKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLME 430
           K++      +      A    +F   DT + G + FE+    L+++ +      ++    
Sbjct: 75  KQIYAQFFPHGDASTYAH--YLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFN 132

Query: 431 AADVDGNGLLSCDEFVTM------------SVHLKRIGNDDILSQAFRFFDKNQSGFIEV 478
             D++ +G ++ +E + +               LK       +   F+  DKN+ G + +
Sbjct: 133 LYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTL 192

Query: 479 DELKEVLLED 488
           DE  E   ED
Sbjct: 193 DEFLESCQED 202

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 92.2 bits (229), Expect = 2e-20
 Identities = 56/313 (17%), Positives = 102/313 (32%), Gaps = 68/313 (21%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           LD     + +GRG +G  ++          A K  +        +  +   E  I R +P
Sbjct: 12  LDNLKLLELIGRGRYGAVYKG--SLDERPVAVKVFSFA------NRQNFINEKNIYR-VP 62

Query: 140 K--HPNIVTY-----KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
              H NI  +     +   + +    LVME    G L    ++       ++  +  ++ 
Sbjct: 63  LMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXK-YLSLHTSDWVSSCRLAHSVT 121

Query: 193 R---------IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE 243
           R              ++  + HRDL   N L      +      DFGLS+          
Sbjct: 122 RGLAYLHTELPRGDHYKPAISHRDLNSRNVLV---KNDGTCVISDFGLSMRLTGNRLVRP 178

Query: 244 ---------IVGSPYYMAPEVLR--------RNYGPEIDVWSAGVIIYILLCGV------ 280
                     VG+  YMAPEVL          +   ++D+++ G+I + +          
Sbjct: 179 GEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPG 238

Query: 281 -------PPFWAETEEGIAHAIIRGKIDFER------DPWPKVSKEAKELVKNML---DP 324
                    F  E         ++  +  E+      + W + S   + L + +    D 
Sbjct: 239 ESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQ 298

Query: 325 NPYNRLTLEEVLE 337
           +   RLT +   E
Sbjct: 299 DAEARLTAQXAEE 311

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190

 Score = 88.0 bits (218), Expect = 3e-20
 Identities = 27/171 (15%), Positives = 63/171 (36%), Gaps = 16/171 (9%)

Query: 368 KFKKKVLRVVAD--NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGL-NMIGQKVSDPD 424
           K K +V+  +       + ++ Q  + F  +    +G L     +               
Sbjct: 7   KLKPEVVEELTRKTYFTEKEVQQWYKGF--IKDCPSGQLDAAGFQKIYKQFFPFGDPTKF 64

Query: 425 VKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEV 484
              +    D + +G +   EF+       R   D+ L  AF+ +D +  G+I  +E+ ++
Sbjct: 65  ATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDI 124

Query: 485 L--LEDNAGPNGDQTIRD---------ILRDVDLDRDGRISFEEFKAMMTS 524
           +  +    G   +    +         I   +D + DG+++ +EF+    +
Sbjct: 125 VDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA 175

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190

 Score = 48.3 bits (115), Expect = 1e-06
 Identities = 21/117 (17%), Positives = 47/117 (40%), Gaps = 12/117 (10%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
           D       +F + D +K+G + F E    L++  +   D  ++   +  D+D +G ++ +
Sbjct: 60  DPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRN 119

Query: 444 EFVTM------------SVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLED 488
           E + +             +  +    +  + + F   DKN  G + + E +E    D
Sbjct: 120 EMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKAD 176

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 89.7 bits (223), Expect = 5e-20
 Identities = 48/216 (22%), Positives = 90/216 (41%), Gaps = 29/216 (13%)

Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
           +   Y  G+ +G G FG+  +   +   +  A K    E  +++     +R E    + L
Sbjct: 8   VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKF---EPRRSDAPQ--LRDEYRTYKLL 62

Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFD-RIVNKGHYTERAAAAVGKTILRIVKV 197
                I       ++     LV++L  G  L D   +    ++ +  A   K +L  V+ 
Sbjct: 63  AGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQS 121

Query: 198 CHENGVMHRDLKPENFLF--ADGSENSQLKAIDFGLSIFFK--------PGEQFCEIVGS 247
            HE  +++RD+KP+NFL    +    + +  +DFG+  F++        P  +   + G+
Sbjct: 122 IHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGT 181

Query: 248 PYYMAP------EVLRRNYGPEIDVWSAG-VIIYIL 276
             YM+       E  RR+     D+ + G V +Y L
Sbjct: 182 ARYMSINTHLGREQSRRD-----DLEALGHVFMYFL 212

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183

 Score = 86.4 bits (214), Expect = 8e-20
 Identities = 29/166 (17%), Positives = 64/166 (38%), Gaps = 16/166 (9%)

Query: 370 KKKVLRVVAD--NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGL-NMIGQKVSDPDVK 426
           + + L  +    N  + ++  + + F   +   +G +  E  K           +     
Sbjct: 2   RPEGLEQLEAQTNFTKRELQVLYRGF--KNEXPSGVVNEETFKQIYAQFFPHGDASTYAH 59

Query: 427 MLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVL- 485
            L  A D    G +  ++FVT    L R    + L   F  +D N+ G+I  +E+ +++ 
Sbjct: 60  YLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVK 119

Query: 486 -LEDNAGPNGDQTIRD---------ILRDVDLDRDGRISFEEFKAM 521
            + D  G      +++           + +D ++DG ++ +EF   
Sbjct: 120 AIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLES 165

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183

 Score = 55.2 bits (133), Expect = 4e-09
 Identities = 22/130 (16%), Positives = 50/130 (38%), Gaps = 14/130 (10%)

Query: 371 KKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLME 430
           K++      +      A    +F   DT + G + FE+    L+++ +      ++    
Sbjct: 42  KQIYAQFFPHGDASTYAH--YLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFN 99

Query: 431 AADVDGNGLLSCDEFVTMSVHLKRIGN------------DDILSQAFRFFDKNQSGFIEV 478
             D++ +G ++ +E + +   +  +                 +   F+  DKN+ G + +
Sbjct: 100 LYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTL 159

Query: 479 DELKEVLLED 488
           DE  E   ED
Sbjct: 160 DEFLESXQED 169

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 89.7 bits (223), Expect = 8e-20
 Identities = 46/216 (21%), Positives = 81/216 (37%), Gaps = 35/216 (16%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
            +  GK++G G FG       + T E  A K    E +K+      +  E    + L   
Sbjct: 10  NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL---EPMKSRAPQ--LHLEYRFYKQLGSG 64

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGG----ELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
             I              +V+EL   G    +LFD       ++ +    +   ++  ++ 
Sbjct: 65  DGIPQVYYFGPCGKYNAMVLELL--GPSLEDLFDL--CDRTFSLKTVLMIAIQLISRMEY 120

Query: 198 CHENGVMHRDLKPENFLFADG--SENSQLKAIDFGLSIFFK--------PGEQFCEIVGS 247
            H   +++RD+KPENFL           +  IDF L+  +         P  +   + G+
Sbjct: 121 VHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGT 180

Query: 248 PYYMAP------EVLRRNYGPEIDVWSAG-VIIYIL 276
             YM+       E  RR+     D+ + G + +Y L
Sbjct: 181 ARYMSINTHLGKEQSRRD-----DLEALGHMFMYFL 211

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190

 Score = 86.1 bits (213), Expect = 1e-19
 Identities = 36/171 (21%), Positives = 65/171 (38%), Gaps = 16/171 (9%)

Query: 368 KFKKKVLRVVAD--NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV-SDPD 424
           K  K  L  +       + ++ Q  + F  +    +G L  E+              +  
Sbjct: 7   KLSKDDLTCLKQSTYFDRREIQQWHKGF--LRDCPSGQLAREDFVKIYKQFFPFGSPEDF 64

Query: 425 VKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEV 484
              L    D D NG +  +EF+T+     R   ++ LS AF  +D N  G+I  DE+  +
Sbjct: 65  ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTI 124

Query: 485 L------LEDNAGPNGD-----QTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           +      +      N D       ++ I + +D + DG I+ +EF+     
Sbjct: 125 VASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190

 Score = 48.3 bits (115), Expect = 1e-06
 Identities = 27/130 (20%), Positives = 55/130 (42%), Gaps = 14/130 (10%)

Query: 371 KKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLME 430
            K+ +        +  A    +F + D D NG + FEE    L+   +   +  +    E
Sbjct: 49  VKIYKQFFPFGSPEDFAN--HLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFE 106

Query: 431 AADVDGNGLLSCDEFVTM------------SVHLKRIGNDDILSQAFRFFDKNQSGFIEV 478
             D++ +G ++ DE +T+            +++      +  + + F+  DKN+ G+I +
Sbjct: 107 LYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITL 166

Query: 479 DELKEVLLED 488
           DE +E    D
Sbjct: 167 DEFREGSKVD 176

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81

 Score = 82.2 bits (204), Expect = 2e-19
 Identities = 18/65 (27%), Positives = 33/65 (50%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
           + +AF+ FD N  G I+ DE K ++ +    P  D  + + +++ D D +G I   EF  
Sbjct: 10  ILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMD 69

Query: 521 MMTSG 525
           ++   
Sbjct: 70  LIKKS 74

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81

 Score = 57.2 bits (139), Expect = 1e-10
 Identities = 21/69 (30%), Positives = 42/69 (60%), Gaps = 1/69 (1%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQK-VSDPDVKMLMEAADVDGNGL 439
           + QD   +I + F + D + +G + F+E K  +  +G++ ++D +V+  M+ AD DGNG+
Sbjct: 2   VRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGV 61

Query: 440 LSCDEFVTM 448
           +   EF+ +
Sbjct: 62  IDIPEFMDL 70

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 88.4 bits (220), Expect = 2e-19
 Identities = 56/299 (18%), Positives = 99/299 (33%), Gaps = 79/299 (26%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACK---KIAKEKLKTEIDIDDVRREVEIMRHLPK 140
              K LG G FG  ++   I  GE        K  +E   +     ++  E  +M  +  
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASV-D 75

Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILR 193
           +P++                  + L+ +L   G L D +  +K +               
Sbjct: 76  NPHVCRLLGICL-------TSTVQLITQLMPFGCLLDYVREHKDNI----------GSQY 118

Query: 194 IVKVCH----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE 243
           ++  C           +  ++HRDL   N L         +K  DFGL+      E+   
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEK--- 172

Query: 244 IVGSPYY-----------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEG 290
                 Y           MA E +  R Y  + DVWS GV ++ ++  G  P+       
Sbjct: 173 -----EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227

Query: 291 IAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD---PNPYNRLT-------LEEVLENP 339
           I+  + +G    ER P P +     ++   M      +  +R           ++  +P
Sbjct: 228 ISSILEKG----ERLPQPPICTI--DVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 89.7 bits (222), Expect = 3e-19
 Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 27/214 (12%)

Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
           + +K+  G+++G G FG  +    I+T E  A K    E +KT+     +  E +I R L
Sbjct: 5   VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL---ENVKTKHPQ--LLYESKIYRIL 59

Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFD-RIVNKGHYTERAAAAVGKTILRIVKV 197
                I   +    + D   LVM+L  G  L D         + +    +   ++  V+ 
Sbjct: 60  QGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEF 118

Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK--------PGEQFCEIVGSPY 249
            H    +HRD+KP+NFL   G   +Q+  IDFGL+  ++        P  +   + G+  
Sbjct: 119 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTAR 178

Query: 250 YMAP------EVLRRNYGPEIDVWSAG-VIIYIL 276
           Y +       E  RR+     D+ S G V++Y L
Sbjct: 179 YASVNTHLGIEQSRRD-----DLESLGYVLMYFL 207

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 88.5 bits (220), Expect = 4e-19
 Identities = 66/276 (23%), Positives = 100/276 (36%), Gaps = 47/276 (17%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
             G+++GRG FG              A K   +E L          +E  I++    HPN
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSC-RETL-PPDLKAKFLQEARILKQY-SHPN 173

Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK-VC---- 198
           IV        K  IY+VMEL +GG+    +  +G           KT+L++V        
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRV------KTLLQMVGDAAAGME 227

Query: 199 --HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY------ 250
                  +HRDL   N L    +E + LK  DFG+S          E     Y       
Sbjct: 228 YLESKCCIHRDLAARNCLV---TEKNVLKISDFGMSR---------EEADGVYAASGGLR 275

Query: 251 ------MAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDF 302
                  APE L    Y  E DVWS G++++     G  P+   + +     + +G    
Sbjct: 276 QVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKG---- 331

Query: 303 ERDPWPK-VSKEAKELVKNMLDPNPYNRLTLEEVLE 337
            R P P+        L++      P  R +   + +
Sbjct: 332 GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ 367

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94

 Score = 81.2 bits (201), Expect = 5e-19
 Identities = 24/82 (29%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 443 DEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDIL 502
            E +     +K   +++ + +AFR  DK+ +G+I   EL+ V+         D+ + +++
Sbjct: 13  GENLYFQSLMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLT-DEEVDEMI 71

Query: 503 RDVDLDRDGRISFEEFKAMMTS 524
           R+ D+D DG++++EEF  MMT+
Sbjct: 72  READIDGDGQVNYEEFVQMMTA 93

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94

 Score = 60.8 bits (148), Expect = 7e-12
 Identities = 22/66 (33%), Positives = 42/66 (63%)

Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSC 442
            D   +I++ F + D D NG ++  EL+  +  +G+K++D +V  ++  AD+DG+G ++ 
Sbjct: 25  TDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNY 84

Query: 443 DEFVTM 448
           +EFV M
Sbjct: 85  EEFVQM 90

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71

 Score = 79.8 bits (198), Expect = 8e-19
 Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
           L  AFR FD++  G I VDEL+  +          + +  ++R+ D+D+DGR+++EEF  
Sbjct: 8   LQVAFRAFDQDGDGHITVDELRRAMAGLGQPLP-QEELDAMIREADVDQDGRVNYEEFAR 66

Query: 521 MMT 523
           M+ 
Sbjct: 67  MLA 69

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71

 Score = 61.7 bits (151), Expect = 2e-12
 Identities = 17/66 (25%), Positives = 36/66 (54%)

Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSC 442
           +  +  ++  F   D D +G +T +EL+  +  +GQ +   ++  ++  ADVD +G ++ 
Sbjct: 2   RAGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNY 61

Query: 443 DEFVTM 448
           +EF  M
Sbjct: 62  EEFARM 67

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83

 Score = 80.0 bits (198), Expect = 1e-18
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 5/68 (7%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVL--LEDNAGPNGDQT---IRDILRDVDLDRDGRISF 515
           L  AF+  D N  G++   EL+  +  L+     + D+       +++  D + DG+IS 
Sbjct: 9   LEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISK 68

Query: 516 EEFKAMMT 523
           EEF     
Sbjct: 69  EEFLNANA 76

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83

 Score = 53.8 bits (130), Expect = 1e-09
 Identities = 14/74 (18%), Positives = 33/74 (44%), Gaps = 6/74 (8%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIG------QKVSDPDVKMLMEAADV 434
           +     A+++  F  +D + +G +T  EL+  +  +       +         L++ AD 
Sbjct: 1   MACKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADK 60

Query: 435 DGNGLLSCDEFVTM 448
           + +G +S +EF+  
Sbjct: 61  NSDGKISKEEFLNA 74

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78

 Score = 79.5 bits (197), Expect = 1e-18
 Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 2/69 (2%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
           + + F+ FD N  G I + EL + L     G      ++ ++ ++D D DG I F EF +
Sbjct: 5   MERIFKRFDTNGDGKISLSELTDAL--RTLGSTSADEVQRMMAEIDTDGDGFIDFNEFIS 62

Query: 521 MMTSGADWK 529
              +     
Sbjct: 63  FCNANPGLM 71

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78

 Score = 52.6 bits (127), Expect = 3e-09
 Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)

Query: 389 IKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
           ++++F   DT+ +G ++  EL D L  +G   +D +V+ +M   D DG+G +  +EF++ 
Sbjct: 5   MERIFKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFISF 63

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 85.1 bits (211), Expect = 3e-18
 Identities = 50/250 (20%), Positives = 88/250 (35%), Gaps = 49/250 (19%)

Query: 81  DKYTFGKELGRGEFGITHQ--CFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
            ++T G+ LG+GEFG   +    + +        K+ K  +    DI++  RE   M+  
Sbjct: 23  QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82

Query: 139 PKHPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
             HP++           A        +++   + G+L   ++                + 
Sbjct: 83  -DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL----PLQ 137

Query: 193 RIVKVCH----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC 242
            +V+                 +HRDL   N +    +E+  +   DFGLS          
Sbjct: 138 TLVRFMVDIACGMEYLSSRNFIHRDLAARNCML---AEDMTVCVADFGLSR--------- 185

Query: 243 EIVGSPYY------------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETE 288
           +I    YY            +A E L    Y    DVW+ GV ++ I+  G  P+     
Sbjct: 186 KIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN 245

Query: 289 EGIAHAIIRG 298
             I + +I G
Sbjct: 246 AEIYNYLIGG 255

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77

 Score = 77.9 bits (193), Expect = 4e-18
 Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L ++Q  +IK+ F + DT+K G + + ELK  +  +G  V  P++  LM   D +GNG +
Sbjct: 1   LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60

Query: 441 SCDEFVTMSVHLKRIGNDD 459
             D+F+ +    ++I N D
Sbjct: 61  GFDDFLDI--MTEKIKNRD 77

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77

 Score = 66.0 bits (162), Expect = 8e-14
 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 5/73 (6%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
           + +AF  FD N++G I+  ELK  +            I +++ + D + +G I F++F  
Sbjct: 9   IKEAFDLFDTNKTGSIDYHELKVAMRALGFDVK-KPEILELMNEYDREGNGYIGFDDFLD 67

Query: 521 MMTSGADWKMASR 533
           +MT     K+ +R
Sbjct: 68  IMTE----KIKNR 76

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207

 Score = 82.3 bits (203), Expect = 4e-18
 Identities = 25/174 (14%), Positives = 62/174 (35%), Gaps = 18/174 (10%)

Query: 367 NKFKKKVLRVVAD--NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV-SDP 423
               K++L  +       ++++    Q F  +     G +T ++ +              
Sbjct: 14  GALSKEILEELQLNTKFSEEELCSWYQSF--LKDCPTGRITQQQFQSIYAKFFPDTDPKA 71

Query: 424 DVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKE 483
             + +  + D + +G L   E+V           +  L  AF  +D + +G I  +E+ E
Sbjct: 72  YAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 131

Query: 484 VLL---------EDNAGPNGDQTIRD----ILRDVDLDRDGRISFEEFKAMMTS 524
           +++         +    P+ + T       I +    + D +++ +EF     +
Sbjct: 132 IVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLA 185

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207

 Score = 53.4 bits (128), Expect = 3e-08
 Identities = 24/132 (18%), Positives = 52/132 (39%), Gaps = 16/132 (12%)

Query: 371 KKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLME 430
           + +      +      AQ   +F   D++ +G L F+E    L+M     ++  ++    
Sbjct: 57  QSIYAKFFPDTDPKAYAQ--HVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFS 114

Query: 431 AADVDGNGLLSCDEFVTMSVHLKRIGN--------------DDILSQAFRFFDKNQSGFI 476
             DVDGNG +S +E + + + + ++                +    + +++F KN    +
Sbjct: 115 LYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKL 174

Query: 477 EVDELKEVLLED 488
              E  E  L +
Sbjct: 175 TEKEFIEGTLAN 186

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 77.2 bits (191), Expect = 6e-18
 Identities = 13/65 (20%), Positives = 36/65 (55%)

Query: 389 IKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
            + +F  +D + +G +++EE+K  ++      ++  ++++ ++ D DGNG +  +EF   
Sbjct: 2   AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61

Query: 449 SVHLK 453
              ++
Sbjct: 62  YGSIQ 66

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 63.0 bits (154), Expect = 7e-13
 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 460 ILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFK 519
           +    F+  D N  G +  +E+K  + +  A  N +Q ++ I + +D D +G I   EF 
Sbjct: 1   MAEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKN-EQLLQLIFKSIDADGNGEIDQNEFA 59

Query: 520 AMMTS 524
               S
Sbjct: 60  KFYGS 64

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 15/61 (24%), Positives = 30/61 (49%)

Query: 425 VKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEV 484
            + L +  DV+G+G +S +E        + I N+ +L   F+  D + +G I+ +E  + 
Sbjct: 2   AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61

Query: 485 L 485
            
Sbjct: 62  Y 62

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92

 Score = 77.6 bits (192), Expect = 9e-18
 Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 3/65 (4%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN-GDQTIRDILRDVDLDRDGRISFEEFK 519
           L +AF+ FDK+Q+G+I   EL+ V+   N G    D+ +  ++++ DLD DG++++EEF 
Sbjct: 11  LKEAFKVFDKDQNGYISASELRHVM--INLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 68

Query: 520 AMMTS 524
            MM +
Sbjct: 69  KMMMT 73

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92

 Score = 64.5 bits (158), Expect = 3e-13
 Identities = 25/90 (27%), Positives = 55/90 (61%), Gaps = 3/90 (3%)

Query: 380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGL 439
           ++  D   ++K+ F + D D+NG ++  EL+  +  +G+K++D +V+ +++ AD+DG+G 
Sbjct: 2   HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ 61

Query: 440 LSCDEFVTMSVHLKRIGNDDI---LSQAFR 466
           ++ +EFV M + ++  G  +    L + F 
Sbjct: 62  VNYEEFVKMMMTVRGGGGGNGWSRLRRKFS 91

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 82.7 bits (205), Expect = 2e-17
 Identities = 53/224 (23%), Positives = 85/224 (37%), Gaps = 42/224 (18%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           +   FGK LG G FG   +      G+  A  K+A + LK      + + +  E++IM H
Sbjct: 46  NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGK----TILR 193
           L +H NIV    A      + ++ E C  G+L + +  K    E   A        +   
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165

Query: 194 IVKVCH----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE 243
           ++                  +HRD+   N L    +     K  DFGL+          +
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLL---TNGHVAKIGDFGLAR---------D 213

Query: 244 IVGSPYY------------MAPEVLR-RNYGPEIDVWSAGVIIY 274
           I+    Y            MAPE +    Y  + DVWS G++++
Sbjct: 214 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 257

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 84.4 bits (209), Expect = 2e-17
 Identities = 61/272 (22%), Positives = 114/272 (41%), Gaps = 35/272 (12%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
              T   +LG G++G  ++    +   T A K + KE     +++++  +E  +M+ + K
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KE---DTMEVEEFLKEAAVMKEI-K 274

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVK-V 197
           HPN+V        +   Y++ E    G L D  R  N+   +          +L +   +
Sbjct: 275 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-------VVLLYMATQI 327

Query: 198 C------HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS--PY 249
                   +   +HR+L   N L     EN  +K  DFGLS     G+ +    G+  P 
Sbjct: 328 SSAMEYLEKKNFIHRNLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPI 383

Query: 250 -YMAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDP 306
            + APE L    +  + DVW+ GV+++ I   G+ P+       +   + +      R  
Sbjct: 384 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD----YRME 439

Query: 307 WPKV-SKEAKELVKNMLDPNPYNRLTLEEVLE 337
            P+   ++  EL++     NP +R +  E+ +
Sbjct: 440 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 471

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 82.1 bits (203), Expect = 4e-17
 Identities = 52/243 (21%), Positives = 93/243 (38%), Gaps = 43/243 (17%)

Query: 76  EGNILD-----KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEK-----LKTEIDI 125
           EG +LD     ++  GK++G G FG+ +  F     E  A   +  E      L +E+  
Sbjct: 27  EGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKF 86

Query: 126 -----DDVRREVEIMRHLPKHPNIVTYK----EAYEDKDAIYLVMELCEGGELFDRIVNK 176
                     +  I R    +  I  +       ++ +   ++VME   G +L       
Sbjct: 87  YQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQN 145

Query: 177 GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK 236
           G + +     +G  +L +++  HEN  +H D+K  N L    + + Q+   D+GLS  + 
Sbjct: 146 GTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPD-QVYLADYGLSYRYC 204

Query: 237 PGEQFCEI--------VGSPYYMA------PEVLRRNYGPEIDVWSAG-VIIYILLCGVP 281
           P     +          G+  + +        + RR+     DV   G  ++   LCG  
Sbjct: 205 PNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRS-----DVEILGYCMLR-WLCGKL 258

Query: 282 PFW 284
           P W
Sbjct: 259 P-W 260

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 81.2 bits (201), Expect = 5e-17
 Identities = 53/258 (20%), Positives = 88/258 (34%), Gaps = 67/258 (25%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACK---KIAKEKLKTEIDIDDVRREVEIMRHLPK 140
              K LG G FG  ++   I  GE        K  +E   +     ++  E  +M  +  
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASV-D 75

Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILR 193
           +P++                  + L+ +L   G L D +  +K +               
Sbjct: 76  NPHVCRLLGICL-------TSTVQLITQLMPFGCLLDYVREHKDNI----------GSQY 118

Query: 194 IVKVCH----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE 243
           ++  C           +  ++HRDL   N L         +K  DFGL+      E+   
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEK--- 172

Query: 244 IVGSPYY-----------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEG 290
                 Y           MA E +  R Y  + DVWS GV ++ ++  G  P+       
Sbjct: 173 -----EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 227

Query: 291 IAHAIIRGKIDFERDPWP 308
           I+  + +G    ER P P
Sbjct: 228 ISSILEKG----ERLPQP 241

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 82.8 bits (205), Expect = 6e-17
 Identities = 62/271 (22%), Positives = 103/271 (38%), Gaps = 45/271 (16%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
              + +G+GEFG             Y   K+A + +K +        E  +M  L +H N
Sbjct: 196 KLLQTIGKGEFGDVMLG-------DYRGNKVAVKCIKNDATAQAFLAEASVMTQL-RHSN 247

Query: 144 IVT-YKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVK-VC- 198
           +V       E+K  +Y+V E    G L D  R   +              +L+    VC 
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG-------DCLLKFSLDVCE 300

Query: 199 -----HENGVMHRDLKPENFLFADGSENSQLKAIDFGLS---IFFKPGEQFCEIVGSPY- 249
                  N  +HRDL   N L    SE++  K  DFGL+      +   +       P  
Sbjct: 301 AMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQDTGKL------PVK 351

Query: 250 YMAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
           + APE LR   +  + DVWS G++++ I   G  P+     + +   + +G     +   
Sbjct: 352 WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG----YKMDA 407

Query: 308 PK-VSKEAKELVKNMLDPNPYNRLTLEEVLE 337
           P        +++KN    +   R T  ++ E
Sbjct: 408 PDGCPPAVYDVMKNCWHLDAATRPTFLQLRE 438

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 80.8 bits (200), Expect = 6e-17
 Identities = 51/229 (22%), Positives = 84/229 (36%), Gaps = 51/229 (22%)

Query: 84  TFGKELGRGEFGITHQ-CFEIETGETY--ACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
              ++LG G FG+  +  ++  +G+T   A K +  + L     +DD  REV  M  L  
Sbjct: 21  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-D 79

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCH 199
           H N++           + +V EL   G L DR+  ++GH+           +  + +   
Sbjct: 80  HRNLIRL-YGVVLTPPMKMVTELAPLGSLLDRLRKHQGHF----------LLGTLSRYAV 128

Query: 200 ----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
                         +HRDL   N L    +    +K  DFGL       +         +
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLL---ATRDLVKIGDFGLMRALPQNDD--------H 177

Query: 250 Y------------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFW 284
           Y             APE L+ R +    D W  GV ++ +   G  P+ 
Sbjct: 178 YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI 226

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 80.9 bits (200), Expect = 9e-17
 Identities = 60/218 (27%), Positives = 90/218 (41%), Gaps = 49/218 (22%)

Query: 84  TFGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
            F ++LG+G FG    C     +  TGE  A KK+   +  TE  + D  RE+EI++ L 
Sbjct: 44  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSL- 99

Query: 140 KHPNIVTYKEA--YEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRI-V 195
           +H NIV YK       +  + L+ME    G L D +  +K              +L+   
Sbjct: 100 QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-------IKLLQYTS 152

Query: 196 KVC------HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
           ++C           +HRDL   N L       +++K  DFGL+      ++        Y
Sbjct: 153 QICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLTKVLPQDKE--------Y 201

Query: 250 Y------------MAPEVLR-RNYGPEIDVWSAGVIIY 274
           Y             APE L    +    DVWS GV++Y
Sbjct: 202 YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 239

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 81.5 bits (201), Expect = 1e-16
 Identities = 68/374 (18%), Positives = 124/374 (33%), Gaps = 115/374 (30%)

Query: 77  GNIL-DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           G++   +Y   ++LG G F      ++I+  +  A K + K     E   +    E+ ++
Sbjct: 32  GDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMK-VVK---SAEHYTETALDEIRLL 87

Query: 136 RHL----PKHPN---IVTYKEAYEDKDA----IYLVMELCEGGELFD-RIVNKGH-YTER 182
           + +    P  PN   +V   + ++        I +V E+  G  L    I +        
Sbjct: 88  KSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLP 146

Query: 183 AAAAVGKTILRIVKVCH-ENGVMHRDLKPENFLFAD------------------------ 217
               + + +L+ +   H +  ++H D+KPEN L +                         
Sbjct: 147 CVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPS 206

Query: 218 ----------------------GSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV 255
                                  +E  ++K  D G + +    + F E + +  Y + EV
Sbjct: 207 GSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACW--VHKHFTEDIQTRQYRSLEV 264

Query: 256 -LRRNYGPEIDVWSAGVIIYILLCGVPPF-------WAETEEGIAHAIIR--GKID---- 301
            +   Y    D+WS   + + L  G   F       +   E+ IA  II   GK+     
Sbjct: 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIAL-IIELLGKVPRKLI 323

Query: 302 ---------FERD----------PWPKVS----------KEAKEL---VKNMLDPNPYNR 329
                    F +           PW              +EA      +  ML+  P  R
Sbjct: 324 VAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKR 383

Query: 330 LTLEEVLENPWIKN 343
            T  E L +PW+ +
Sbjct: 384 ATAAECLRHPWLNS 397

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 80.4 bits (199), Expect = 1e-16
 Identities = 45/245 (18%), Positives = 95/245 (38%), Gaps = 40/245 (16%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           +K T  +ELG+G FG+ ++       +     ++A + +    +  +  +   E  +M+ 
Sbjct: 25  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
                ++V             ++MEL   G+L   + +              ++ +++++
Sbjct: 85  F-NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQM 143

Query: 198 CH----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS 247
                        N  +HRDL   N +    +E+  +K  DFG++          +I  +
Sbjct: 144 AGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTVKIGDFGMTR---------DIYET 191

Query: 248 PYY------------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAH 293
            YY            M+PE L+   +    DVWS GV+++ I      P+   + E +  
Sbjct: 192 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 251

Query: 294 AIIRG 298
            ++ G
Sbjct: 252 FVMEG 256

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 80.4 bits (199), Expect = 1e-16
 Identities = 49/246 (19%), Positives = 91/246 (36%), Gaps = 42/246 (17%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETY---ACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           +    GK LG GEFG   +    +   T    A K + K    ++ +I++   E   M+ 
Sbjct: 34  NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTM-KLDNSSQREIEEFLSEAACMKD 92

Query: 138 LPKHPNIVT-----YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
              HPN++       + + +      +++   + G+L   ++     T      +   + 
Sbjct: 93  F-SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLK 151

Query: 193 RIVKVCH------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVG 246
            +V +            +HRDL   N +     ++  +   DFGLS          +I  
Sbjct: 152 FMVDIALGMEYLSNRNFLHRDLAARNCML---RDDMTVCVADFGLSK---------KIYS 199

Query: 247 SPYY------------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIA 292
             YY            +A E L  R Y  + DVW+ GV ++ I   G+ P+       + 
Sbjct: 200 GDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMY 259

Query: 293 HAIIRG 298
             ++ G
Sbjct: 260 DYLLHG 265

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 79.6 bits (197), Expect = 1e-16
 Identities = 49/285 (17%), Positives = 87/285 (30%), Gaps = 58/285 (20%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKI--AKEKLK--TEIDIDDVRREVEIMRHLP 139
            F + LG+G F    +    E G+     +     + L        +       +M  L 
Sbjct: 11  IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL- 69

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
            H ++V         D   LV E  + G L   +    +            IL  ++V  
Sbjct: 70  SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCI---------NILWKLEVAK 120

Query: 200 ----------ENGVMHRDLKPENFL-----FADGSENSQLKAIDFGLSIFFKPGEQFCEI 244
                     EN ++H ++  +N L              +K  D G+SI          +
Sbjct: 121 QLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISIT---------V 171

Query: 245 VGSPYY------MAPEVL--RRNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAI 295
           +           + PE +   +N     D WS G  ++ I   G  P  A   +      
Sbjct: 172 LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY 231

Query: 296 IRGKIDFERDPWPKVSKEAKELVKNMLD---PNPYNRLTLEEVLE 337
                   + P P    +A EL   + +     P +R +   ++ 
Sbjct: 232 EDR----HQLPAP----KAAELANLINNCMDYEPDHRPSFRAIIR 268

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 80.1 bits (198), Expect = 1e-16
 Identities = 53/245 (21%), Positives = 84/245 (34%), Gaps = 50/245 (20%)

Query: 84  TFGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
            +  +LG+G FG    C        TG   A K++   +        D +RE++I++ L 
Sbjct: 26  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL---QHSGPDQQRDFQREIQILKAL- 81

Query: 140 KHPNIVTYKE--AYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRI-V 195
               IV Y+       + ++ LVME    G L D +  ++              +L    
Sbjct: 82  HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA-------SRLLLYSS 134

Query: 196 KVC------HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
           ++C           +HRDL   N L       + +K  DFGL+      +         Y
Sbjct: 135 QICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIADFGLAKLLPLDKD--------Y 183

Query: 250 Y------------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAI 295
           Y             APE L    +  + DVWS GV++Y +            E       
Sbjct: 184 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGC 243

Query: 296 IRGKI 300
            R   
Sbjct: 244 ERDVP 248

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86

 Score = 73.8 bits (182), Expect = 2e-16
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
             + F+ FD N  G I   EL + L     G      +R ++ ++D D DG ISF+EF  
Sbjct: 13  RERIFKRFDTNGDGKISSSELGDAL--KTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTD 70

Query: 521 MMTSGAD 527
              +   
Sbjct: 71  FARANRG 77

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86

 Score = 68.8 bits (169), Expect = 8e-15
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)

Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           A       +A  +++F   DT+ +G ++  EL D L  +G  V+  +V+ +M   D DG+
Sbjct: 2   AAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDGD 60

Query: 438 GLLSCDEFVTM 448
           G +S DEF   
Sbjct: 61  GFISFDEFTDF 71

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 79.3 bits (196), Expect = 2e-16
 Identities = 58/218 (26%), Positives = 90/218 (41%), Gaps = 49/218 (22%)

Query: 84  TFGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
            F ++LG+G FG    C     +  TGE  A KK+   +  TE  + D  RE+EI++ L 
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL---QHSTEEHLRDFEREIEILKSL- 68

Query: 140 KHPNIVTYKEA--YEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRI-V 195
           +H NIV YK       +  + L+ME    G L D +  +K              +L+   
Sbjct: 69  QHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-------IKLLQYTS 121

Query: 196 KVC------HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
           ++C           +HRDL   N L       +++K  DFGL+      ++        +
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLTKVLPQDKE--------F 170

Query: 250 Y------------MAPEVLR-RNYGPEIDVWSAGVIIY 274
           +             APE L    +    DVWS GV++Y
Sbjct: 171 FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 208

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67

 Score = 72.9 bits (180), Expect = 2e-16
 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
             + F  FDKN+ G + +DE +EV L  +      + I     ++D+D +G ++ +EF +
Sbjct: 3   AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFT-QEDIVKFFEEIDVDGNGELNADEFTS 61

Query: 521 MMTS 524
            +  
Sbjct: 62  CIEK 65

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67

 Score = 72.5 bits (179), Expect = 2e-16
 Identities = 19/62 (30%), Positives = 32/62 (51%)

Query: 387 AQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFV 446
           +  K++F   D +K+G L+ +E ++         +  D+    E  DVDGNG L+ DEF 
Sbjct: 1   SSAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFT 60

Query: 447 TM 448
           + 
Sbjct: 61  SC 62

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 78.8 bits (195), Expect = 3e-16
 Identities = 49/228 (21%), Positives = 83/228 (36%), Gaps = 46/228 (20%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           ++ +FGK LG G FG   +       ++ A   +A + LK      + + +  E++++ +
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFD--------RIVNKGHYTERAAAAVGK 189
           L  H NIV    A        ++ E C  G+L +         I +K          +  
Sbjct: 83  LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142

Query: 190 TILRIVKVCH----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
            +  ++   +              +HRDL   N L    +     K  DFGL+       
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLAR------ 193

Query: 240 QFCEIVGSPYY------------MAPEVLR-RNYGPEIDVWSAGVIIY 274
              +I     Y            MAPE +    Y  E DVWS G+ ++
Sbjct: 194 ---DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW 238

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183

 Score = 76.0 bits (187), Expect = 3e-16
 Identities = 27/142 (19%), Positives = 59/142 (41%), Gaps = 14/142 (9%)

Query: 396 MDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVD-GNGLLSCDEFVT-MSVHLK 453
           +++     + FE++      + +  ++P  + +            LS ++F+  +SV   
Sbjct: 37  VESSLRAQVPFEQILS----LPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSD 92

Query: 454 RIGNDDILSQAFRFFDKNQSGFIEVDELKEVLL----EDNAGPNGDQTIRDI----LRDV 505
               D     AFR FD +  G +  ++L  ++     E          ++ +    L + 
Sbjct: 93  TATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEES 152

Query: 506 DLDRDGRISFEEFKAMMTSGAD 527
           D+DRDG I+  EF+ +++   D
Sbjct: 153 DIDRDGTINLSEFQHVISRSPD 174

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 9/69 (13%)

Query: 389 IKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPD---------VKMLMEAADVDGNGL 439
               F + D D +G L  E+L   +N +  +  D           +  ++E +D+D +G 
Sbjct: 100 SHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGT 159

Query: 440 LSCDEFVTM 448
           ++  EF  +
Sbjct: 160 INLSEFQHV 168

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107

 Score = 73.6 bits (181), Expect = 4e-16
 Identities = 18/93 (19%), Positives = 39/93 (41%), Gaps = 3/93 (3%)

Query: 359 RIKQFSIMNKFKKKVL---RVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNM 415
           + +Q   +++  K+ L   +  +D     ++   K+ +   D + NGD+    LK  L  
Sbjct: 1   KAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEK 60

Query: 416 IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
           +G   +  ++K L+           S  +F+ M
Sbjct: 61  LGVPKTHLELKKLIGEVSSGSGETFSYPDFLRM 93

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107

 Score = 68.9 bits (169), Expect = 2e-14
 Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 1/67 (1%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
             + +  FD N +G I++  LK +L +        + ++ ++ +V        S+ +F  
Sbjct: 34  FKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLE-LKKLIGEVSSGSGETFSYPDFLR 92

Query: 521 MMTSGAD 527
           MM     
Sbjct: 93  MMLGKRS 99

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 79.0 bits (195), Expect = 4e-16
 Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 27/212 (12%)

Query: 54  HASNVDKKSISFQLRSVVSNPA---EGNILD-----KYTFGKELGRGEFGITHQCFEIET 105
           H+S VD  + +   +S+ ++      G +L      ++       R   GI ++     T
Sbjct: 7   HSSGVDLGTENLYFQSMTTSLEALPTGTVLTDKSGRQWKLKSFQTRDNQGILYEAAPTST 66

Query: 106 GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAY-------------- 151
               +  +  K  LK +     +  E    +   K   +  +K+ Y              
Sbjct: 67  LTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFG 126

Query: 152 -EDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDL 208
                  +LV+    G  L     +  K   +ER+   V   +L  ++  HEN  +H ++
Sbjct: 127 VHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNV 185

Query: 209 KPENFLFADGSENSQLKAIDFGLSIFFKPGEQ 240
             EN       ++ Q+    +G +  + P  +
Sbjct: 186 TAENIFVDPEDQS-QVTLAGYGFAFRYCPSGK 216

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 78.5 bits (194), Expect = 4e-16
 Identities = 59/216 (27%), Positives = 84/216 (38%), Gaps = 46/216 (21%)

Query: 84  TFGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
              ++LG G FG             TGE  A K + K            ++E++I+R L 
Sbjct: 34  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KAD-AGPQHRSGWKQEIDILRTL- 90

Query: 140 KHPNIVTYKEAYEDKDA--IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
            H +I+ YK   ED  A  + LVME    G L D       Y  R +  + + +L   ++
Sbjct: 91  YHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRD-------YLPRHSIGLAQLLLFAQQI 143

Query: 198 C------HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY- 250
           C      H    +HRDL   N L      +  +K  DFGL+     G +        YY 
Sbjct: 144 CEGMAYLHAQHYIHRDLAARNVLLD---NDRLVKIGDFGLAKAVPEGHE--------YYR 192

Query: 251 -----------MAPEVLR-RNYGPEIDVWSAGVIIY 274
                       APE L+   +    DVWS GV +Y
Sbjct: 193 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 228

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 78.5 bits (194), Expect = 4e-16
 Identities = 51/245 (20%), Positives = 89/245 (36%), Gaps = 40/245 (16%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
              T  + LG G FG  ++          +  ++A + L    +E D  D   E  I+  
Sbjct: 30  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
              H NIV            +++MEL  GG+L   +        + ++     +L ++ V
Sbjct: 90  F-NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSL---AMLDLLHV 145

Query: 198 CH----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS 247
                       EN  +HRD+   N L          K  DFG++          +I  +
Sbjct: 146 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---------DIYRA 196

Query: 248 PYY------------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAH 293
            YY            M PE      +  + D WS GV+++ I   G  P+ +++ + +  
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 256

Query: 294 AIIRG 298
            +  G
Sbjct: 257 FVTSG 261

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 78.5 bits (194), Expect = 4e-16
 Identities = 49/248 (19%), Positives = 85/248 (34%), Gaps = 63/248 (25%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACK---KIAKEKLKTEIDIDDVRREVEIMRHLPK 140
              K LG G FG  H+   I  GE+       K+ ++K         V   +  +  L  
Sbjct: 16  RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSL-D 73

Query: 141 HPNIV------TYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILR 193
           H +IV                ++ LV +    G L D +  ++G                
Sbjct: 74  HAHIVRLLGLCP-------GSSLQLVTQYLPLGSLLDHVRQHRGAL----------GPQL 116

Query: 194 IVKVCH----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE 243
           ++              E+G++HR+L   N L       SQ++  DFG++    P ++   
Sbjct: 117 LLNWGVQIAKGMYYLEEHGMVHRNLAARNVLL---KSPSQVQVADFGVADLLPPDDK--- 170

Query: 244 IVGSPYY-----------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEG 290
                             MA E +    Y  + DVWS GV ++ ++  G  P+       
Sbjct: 171 -----QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE 225

Query: 291 IAHAIIRG 298
           +   + +G
Sbjct: 226 VPDLLEKG 233

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 79.3 bits (196), Expect = 4e-16
 Identities = 75/303 (24%), Positives = 113/303 (37%), Gaps = 61/303 (20%)

Query: 45  SPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKY--------------TFGKELG 90
           +   ES S   SN     I+ +L S    P    + +                T GK LG
Sbjct: 31  TVSAESSSSMNSNTPLVRITTRLSSTADTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLG 90

Query: 91  RGEFGITHQ--CFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRHLPKHPNIV 145
            G FG         I+  +      +A + LK   TE D+ D+  E+E+M+ + KH NI+
Sbjct: 91  EGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNII 150

Query: 146 TYKEAYEDKDAIYLVMELCEGGELFD----RIVNKGHYTERAAAAVGK--TILRIVKVCH 199
               A      +Y+++E    G L +    R      Y+        +  T   +V   +
Sbjct: 151 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTY 210

Query: 200 ----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
                         +HRDL   N L    +EN+ +K  DFGL+          +I    Y
Sbjct: 211 QLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLAR---------DINNIDY 258

Query: 250 Y------------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAI 295
           Y            MAPE L  R Y  + DVWS GV+++ I   G  P+     E +   +
Sbjct: 259 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 318

Query: 296 IRG 298
             G
Sbjct: 319 KEG 321

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 79.8 bits (197), Expect = 5e-16
 Identities = 59/271 (21%), Positives = 99/271 (36%), Gaps = 35/271 (12%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK-TEIDIDDVRREVEIMRHLP 139
           +      +LG+G FG          G      ++A + LK   +  +   +E ++M+ L 
Sbjct: 184 ESLRLEVKLGQGCFGEVWM------GTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL- 236

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVK-V 197
           +H  +V    A   ++ IY+V E    G L D +    G Y           ++ +   +
Sbjct: 237 RHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL------PQLVDMAAQI 289

Query: 198 C------HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-PY- 249
                       +HRDL+  N L     EN   K  DFGL+   +  E         P  
Sbjct: 290 ASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIEDNEYTARQGAKFPIK 346

Query: 250 YMAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
           + APE      +  + DVWS G+++  +   G  P+       +   + RG     R P 
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YRMPC 402

Query: 308 PK-VSKEAKELVKNMLDPNPYNRLTLEEVLE 337
           P    +   +L+       P  R T E +  
Sbjct: 403 PPECPESLHDLMCQCWRKEPEERPTFEYLQA 433

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 77.6 bits (192), Expect = 5e-16
 Identities = 55/234 (23%), Positives = 90/234 (38%), Gaps = 40/234 (17%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
            +    + +G+GEFG             Y   K+A + +K +        E  +M  L +
Sbjct: 21  KELKLLQTIGKGEFGDVMLG-------DYRGNKVAVKCIKNDATAQAFLAEASVMTQL-R 72

Query: 141 HPNIVT-YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           H N+V       E+K  +Y+V E    G L D +        R+          ++K   
Sbjct: 73  HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL--------RSRGRSVLGGDCLLKFSL 124

Query: 200 ----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS-- 247
                      N  +HRDL   N L    SE++  K  DFGL+      E          
Sbjct: 125 DVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLT-----KEASSTQDTGKL 176

Query: 248 PY-YMAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           P  + APE LR + +  + DVWS G++++ I   G  P+     + +   + +G
Sbjct: 177 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG 230

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 78.5 bits (194), Expect = 5e-16
 Identities = 59/251 (23%), Positives = 92/251 (36%), Gaps = 51/251 (20%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           +   F   +G G FG   +    + G        A +++K   ++ D  D   E+E++  
Sbjct: 25  NDIKFQDVIGEGNFGQVLKARIKKDGLR---MDAAIKRMKEYASKDDHRDFAGELEVLCK 81

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFD-----RIVNKGHYTERAAAAVGK-TI 191
           L  HPNI+    A E +  +YL +E    G L D     R++        A +     + 
Sbjct: 82  LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 141

Query: 192 LRIVKVCH----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF 241
            +++              +   +HRDL   N L     EN   K  DFGLS         
Sbjct: 142 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLS--------- 189

Query: 242 CEIVGSPYY------------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAET 287
               G   Y            MA E L    Y    DVWS GV+++ I+  G  P+   T
Sbjct: 190 ---RGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 246

Query: 288 EEGIAHAIIRG 298
              +   + +G
Sbjct: 247 CAELYEKLPQG 257

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91

 Score = 72.4 bits (178), Expect = 6e-16
 Identities = 15/86 (17%), Positives = 37/86 (43%), Gaps = 2/86 (2%)

Query: 363 FSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSD 422
               +   ++ L     +   +++A+++ +F   D +++G L  EE +     +   V  
Sbjct: 3   HHHHHSSGRENLYFQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELR--VRP 60

Query: 423 PDVKMLMEAADVDGNGLLSCDEFVTM 448
            D + + +  D D +G ++  EF   
Sbjct: 61  ADAEAVFQRLDADRDGAITFQEFARG 86

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91

 Score = 67.4 bits (165), Expect = 3e-14
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 3/62 (4%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
           L   F   D N+SG +E +E + +  E    P        + + +D DRDG I+F+EF  
Sbjct: 29  LRSVFAACDANRSGRLEREEFRALCTELRVRP---ADAEAVFQRLDADRDGAITFQEFAR 85

Query: 521 MM 522
             
Sbjct: 86  GF 87

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 78.6 bits (194), Expect = 6e-16
 Identities = 54/292 (18%), Positives = 106/292 (36%), Gaps = 46/292 (15%)

Query: 33  KRNDASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRG 92
           +    S  K + S        +  ++D  +++ +L   V +   G       F + +GRG
Sbjct: 41  EELSTSLYKKAGSENLYFQGANTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRG 100

Query: 93  EFGITHQ--CFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT-YKE 149
            FG  +     + +  + +   K          ++     E  IM+    HPN+++    
Sbjct: 101 HFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDF-SHPNVLSLLGI 158

Query: 150 AYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH---------- 199
               + +  +V+   + G+L + I N+ H           T+  ++              
Sbjct: 159 CLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---------TVKDLIGFGLQVAKGMKFLA 209

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY--------- 250
               +HRDL   N +     E   +K  DFGL+      E          +         
Sbjct: 210 SKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFD------SVHNKTGAKLPV 260

Query: 251 --MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
             MA E L+ + +  + DVWS GV+++ ++  G PP+       I   +++G
Sbjct: 261 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 312

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214

 Score = 76.1 bits (187), Expect = 7e-16
 Identities = 30/142 (21%), Positives = 60/142 (42%), Gaps = 14/142 (9%)

Query: 396 MDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVD-GNGLLSCDEFVT-MSVHLK 453
           +++     + FE++      + +  ++P  + +            LS ++F+  +SV   
Sbjct: 68  VESSLRAQVPFEQILS----LPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSD 123

Query: 454 RIGNDDILSQAFRFFDKNQSGFIEVDELKEV---LLEDNAGPNGD-----QTIRDILRDV 505
               D     AFR FD +  G +  ++L  +   L  +            Q I +IL + 
Sbjct: 124 TATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEES 183

Query: 506 DLDRDGRISFEEFKAMMTSGAD 527
           D+DRDG I+  EF+ +++   D
Sbjct: 184 DIDRDGTINLSEFQHVISRSPD 205

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 77.3 bits (191), Expect = 8e-16
 Identities = 61/218 (27%), Positives = 88/218 (40%), Gaps = 48/218 (22%)

Query: 84  TFGKELGRGEFGITHQC----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
              ++LG G FG    C        TGE  A K + K +      I D+++E+EI+R+L 
Sbjct: 24  KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSL-KPE-SGGNHIADLKKEIEILRNL- 80

Query: 140 KHPNIVTYKEA--YEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRI-V 195
            H NIV YK     +  + I L+ME    G L + +  NK            K  L+  V
Sbjct: 81  YHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINL-------KQQLKYAV 133

Query: 196 KVC------HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
           ++C           +HRDL   N L        Q+K  DFGL+   +  ++        Y
Sbjct: 134 QICKGMDYLGSRQYVHRDLAARNVLV---ESEHQVKIGDFGLTKAIETDKE--------Y 182

Query: 250 Y------------MAPEVLR-RNYGPEIDVWSAGVIIY 274
           Y             APE L    +    DVWS GV ++
Sbjct: 183 YTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLH 220

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 79.5 bits (196), Expect = 8e-16
 Identities = 60/274 (21%), Positives = 100/274 (36%), Gaps = 41/274 (14%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK-TEIDIDDVRREVEIMRHLP 139
           +      +LG+G FG          G      ++A + LK   +  +   +E ++M+ L 
Sbjct: 267 ESLRLEVKLGQGCFGEVWM------GTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL- 319

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVC 198
           +H  +V    A   ++ IY+V E    G L D +    G Y           + ++V + 
Sbjct: 320 RHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYL---------RLPQLVDMA 369

Query: 199 ----------HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS- 247
                          +HRDL+  N L     EN   K  DFGL+   +  E         
Sbjct: 370 AQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIEDNEYTARQGAKF 426

Query: 248 PY-YMAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFER 304
           P  + APE      +  + DVWS G+++  +   G  P+       +   + RG     R
Sbjct: 427 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG----YR 482

Query: 305 DPWPK-VSKEAKELVKNMLDPNPYNRLTLEEVLE 337
            P P    +   +L+       P  R T E +  
Sbjct: 483 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 516

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 78.2 bits (193), Expect = 9e-16
 Identities = 50/245 (20%), Positives = 89/245 (36%), Gaps = 40/245 (16%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
              T  + LG G FG  ++          +  ++A + L    +E D  D   E  I+  
Sbjct: 71  KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
              H NIV            ++++EL  GG+L   +        + ++     +L ++ V
Sbjct: 131 F-NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSL---AMLDLLHV 186

Query: 198 CH----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS 247
                       EN  +HRD+   N L          K  DFG++          +I  +
Sbjct: 187 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---------DIYRA 237

Query: 248 PYY------------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAH 293
            YY            M PE      +  + D WS GV+++ I   G  P+ +++ + +  
Sbjct: 238 GYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 297

Query: 294 AIIRG 298
            +  G
Sbjct: 298 FVTSG 302

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 77.3 bits (191), Expect = 1e-15
 Identities = 57/268 (21%), Positives = 93/268 (34%), Gaps = 51/268 (19%)

Query: 69  SVVSNPAEGNILDKY-------TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK- 120
            ++ NP   +    +           ELG G FG                  +A + LK 
Sbjct: 22  HIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE 81

Query: 121 -TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFD-----RIV 174
            +E    D +RE E++  L +H +IV +     +   + +V E    G+L          
Sbjct: 82  ASESARQDFQREAELLTML-QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPD 140

Query: 175 NKGHYTERAAAAVGKTILRIVKVCH----------ENGVMHRDLKPENFLFADGSENSQL 224
            K        A     + +++ V                +HRDL   N L     +   +
Sbjct: 141 AKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV---GQGLVV 197

Query: 225 KAIDFGLSIFFKPGEQFCEIVGSPYY------------MAPEVLR-RNYGPEIDVWSAGV 271
           K  DFG+S          +I  + YY            M PE +  R +  E DVWS GV
Sbjct: 198 KIGDFGMSR---------DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGV 248

Query: 272 IIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           +++ I   G  P++  +       I +G
Sbjct: 249 VLWEIFTYGKQPWYQLSNTEAIDCITQG 276

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 76.5 bits (189), Expect = 1e-15
 Identities = 52/240 (21%), Positives = 88/240 (36%), Gaps = 49/240 (20%)

Query: 84  TFGKELGRGEFGITHQ--CFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
              + LG G FG  ++      +  +     K  K+   T  + +    E  IM++L  H
Sbjct: 15  VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNL-DH 72

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH-- 199
           P+IV       +++  +++MEL   GEL   +    +            +L +V      
Sbjct: 73  PHIVKL-IGIIEEEPTWIIMELYPYGELGHYLERNKNSL---------KVLTLVLYSLQI 122

Query: 200 --------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY- 250
                       +HRD+   N L    +    +K  DFGLS +         I    YY 
Sbjct: 123 CKAMAYLESINCVHRDIAVRNILV---ASPECVKLGDFGLSRY---------IEDEDYYK 170

Query: 251 ----------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
                     M+PE +  R +    DVW   V ++ IL  G  PF+    + +   + +G
Sbjct: 171 ASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG 230

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 76.9 bits (190), Expect = 2e-15
 Identities = 68/253 (26%), Positives = 101/253 (39%), Gaps = 47/253 (18%)

Query: 81  DKYTFGKELGRGEFGITHQ--CFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           DK T GK LG G FG         I+  +      +A + LK   TE D+ D+  E+E+M
Sbjct: 35  DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFD----RIVNKGHYTERAAAAVGK-- 189
           + + KH NI+    A      +Y+++E    G L +    R      Y+        +  
Sbjct: 95  KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154

Query: 190 TILRIVKVCH----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           T   +V   +              +HRDL   N L    +EN+ +K  DFGL+       
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLAR------ 205

Query: 240 QFCEIVGSPYY------------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWA 285
              +I    YY            MAPE L  R Y  + DVWS GV+++ I   G  P+  
Sbjct: 206 ---DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262

Query: 286 ETEEGIAHAIIRG 298
              E +   +  G
Sbjct: 263 IPVEELFKLLKEG 275

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 76.1 bits (188), Expect = 2e-15
 Identities = 55/238 (23%), Positives = 87/238 (36%), Gaps = 48/238 (20%)

Query: 86  GKELGRGEFGITHQ-CFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNI 144
            KELG G FG   +  ++++        KI K +       D++  E  +M+ L  +P I
Sbjct: 22  DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-DNPYI 80

Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH----- 199
           V       + ++  LVME+ E G L   +    H               I+++ H     
Sbjct: 81  VRM-IGICEAESWMLVMEMAELGPLNKYLQQNRHV----------KDKNIIELVHQVSMG 129

Query: 200 -----ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY---- 250
                E+  +HRDL   N L          K  DFGLS   +  E         YY    
Sbjct: 130 MKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADEN--------YYKAQT 178

Query: 251 --------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
                    APE +    +  + DVWS GV+++     G  P+       +   + +G
Sbjct: 179 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKG 236

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 78.4 bits (193), Expect = 2e-15
 Identities = 59/240 (24%), Positives = 88/240 (36%), Gaps = 50/240 (20%)

Query: 86  GKELGRGEFGITHQ-CFEIETGETY-ACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
             ELG G FG   Q  + +   +   A K + +     + D +++ RE +IM  L  +P 
Sbjct: 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQL-DNPY 397

Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH---- 199
           IV         +A+ LVME+  GG L   +V K              +  + ++ H    
Sbjct: 398 IVRL-IGVCQAEALMLVMEMAGGGPLHKFLVGKREEI---------PVSNVAELLHQVSM 447

Query: 200 ------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY--- 250
                 E   +HR+L   N L          K  DFGLS      +         YY   
Sbjct: 448 GMKYLEEKNFVHRNLAARNVLL---VNRHYAKISDFGLSKALGADD--------SYYTAR 496

Query: 251 ---------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGK 299
                     APE +  R +    DVWS GV ++  L  G  P+       +   I +GK
Sbjct: 497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK 556

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 77.0 bits (190), Expect = 2e-15
 Identities = 58/228 (25%), Positives = 93/228 (40%), Gaps = 46/228 (20%)

Query: 81  DKYTFGKELGRGEFGITHQ--CFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIM 135
           D+   GK LG G FG         ++  +     K+A + LK   TE D+ D+  E+E+M
Sbjct: 69  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFD-----RIVNKGHYTERAAAAVGK- 189
           + + KH NI+    A      +Y+++E    G L +     R     +    +     + 
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188

Query: 190 TILRIVKVCH----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
           +   +V   +              +HRDL   N L    +E++ +K  DFGL+       
Sbjct: 189 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLAR------ 239

Query: 240 QFCEIVGSPYY------------MAPEVLR-RNYGPEIDVWSAGVIIY 274
              +I    YY            MAPE L  R Y  + DVWS GV+++
Sbjct: 240 ---DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW 284

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 78.0 bits (192), Expect = 3e-15
 Identities = 58/240 (24%), Positives = 88/240 (36%), Gaps = 49/240 (20%)

Query: 84  TFGKELGRGEFGITHQ--CFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
             G+ +G G+FG  HQ      E        K  K    ++   +   +E   MR    H
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQF-DH 450

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH-- 199
           P+IV        ++ ++++MELC  GEL   +  +              +  ++   +  
Sbjct: 451 PHIVKL-IGVITENPVWIIMELCTLGELRSFLQVRKFSL---------DLASLILYAYQL 500

Query: 200 --------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY- 250
                       +HRD+   N L    S N  +K  DFGLS           +  S YY 
Sbjct: 501 STALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSR---------YMEDSTYYK 548

Query: 251 ----------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
                     MAPE +  R +    DVW  GV ++ IL+ GV PF       +   I  G
Sbjct: 549 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG 608

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90

 Score = 70.3 bits (173), Expect = 3e-15
 Identities = 22/68 (32%), Positives = 40/68 (58%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L ++ +A+ K  F M D D  GD++ +EL   + M+GQ  +  ++  ++E  D DG+G +
Sbjct: 14  LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73

Query: 441 SCDEFVTM 448
             +EF+ M
Sbjct: 74  DFEEFLVM 81

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90

 Score = 68.8 bits (169), Expect = 1e-14
 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 463 QAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM 522
            AF  FD +  G I   EL  V+      P   + +  I+ +VD D  G I FEEF  MM
Sbjct: 24  AAFDMFDADGGGDISTKELGTVMRMLGQNPT-KEELDAIIEEVDEDGSGTIDFEEFLVMM 82

Query: 523 T 523
            
Sbjct: 83  V 83

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 75.8 bits (187), Expect = 3e-15
 Identities = 53/272 (19%), Positives = 102/272 (37%), Gaps = 54/272 (19%)

Query: 57  NVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAK 116
           ++D  +++ +L   V +   G       F + +GRG FG  +    ++          A 
Sbjct: 1   HIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGK--KIHCAV 58

Query: 117 EKLK---TEIDIDDVRREVEIMRHLPKHPNIVT-YKEAYEDKDAIYLVMELCEGGELFDR 172
           + L       ++     E  IM+    HPN+++        + +  +V+   + G+L + 
Sbjct: 59  KSLNRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 117

Query: 173 IVNKGHYTERAAAAVGKTILRIVKVCH----------ENGVMHRDLKPENFLFADGSENS 222
           I N+ H           T+  ++                  +HRDL   N +     E  
Sbjct: 118 IRNETHNP---------TVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML---DEKF 165

Query: 223 QLKAIDFGLSIFFKPGEQFCEIVGSPYY--------------MAPEVLR-RNYGPEIDVW 267
            +K  DFGL+          ++    YY              MA E L+ + +  + DVW
Sbjct: 166 TVKVADFGLAR---------DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVW 216

Query: 268 SAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           S GV+++ ++  G PP+       I   +++G
Sbjct: 217 SFGVLLWELMTRGAPPYPDVNTFDITVYLLQG 248

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 75.7 bits (187), Expect = 3e-15
 Identities = 54/229 (23%), Positives = 97/229 (42%), Gaps = 30/229 (13%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN 143
           T   +LG G++G  ++    +   T A K + KE     +++++  +E  +M+ + KHPN
Sbjct: 16  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL-KE---DTMEVEEFLKEAAVMKEI-KHPN 70

Query: 144 IVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVK-VCH- 199
           +V        +   Y++ E    G L D  R  N+   +          +L +   +   
Sbjct: 71  LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-------VVLLYMATQISSA 123

Query: 200 -----ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS--PY-YM 251
                +   +HRDL   N L     EN  +K  DFGLS     G+ +    G+  P  + 
Sbjct: 124 MEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWT 179

Query: 252 APEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
           APE L    +  + DVW+ GV+++ I   G+ P+       +   + + 
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 228

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 74.9 bits (185), Expect = 3e-15
 Identities = 50/239 (20%), Positives = 93/239 (38%), Gaps = 52/239 (21%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE-IDIDDVRREVEIMRHLPKHP 142
           T  KELG G+FG+         G+      +A + +K   +  D+  +E + M  L  HP
Sbjct: 11  TLLKELGSGQFGVVKL------GKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKL-SHP 63

Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH--- 199
            +V +      +  IY+V E    G L + + + G               +++++C+   
Sbjct: 64  KLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGL---------EPSQLLEMCYDVC 114

Query: 200 -------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY-- 250
                   +  +HRDL   N L      +  +K  DFG++ +         ++   Y   
Sbjct: 115 EGMAFLESHQFIHRDLAARNCLV---DRDLCVKVSDFGMTRY---------VLDDQYVSS 162

Query: 251 ---------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
                     APEV     Y  + DVW+ G++++ +   G  P+   T   +   + +G
Sbjct: 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG 221

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 75.8 bits (187), Expect = 3e-15
 Identities = 54/227 (23%), Positives = 86/227 (37%), Gaps = 45/227 (19%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           D+   GK LGRG FG   +       +T  C+ +A + LK   T  +   +  E++I+ H
Sbjct: 27  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86

Query: 138 LPKHPNIVT-YKEAYEDKDAIYLVMELCEGGELFD------RIVNKGHYTERAAAAVGKT 190
           +  H N+V       +    + +++E C+ G L                          T
Sbjct: 87  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146

Query: 191 ILRIVKVCH----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ 240
           +  ++                  +HRDL   N L    SE + +K  DFGL+        
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLAR------- 196

Query: 241 FCEIVGSPYY------------MAPEVLR-RNYGPEIDVWSAGVIIY 274
             +I   P Y            MAPE +  R Y  + DVWS GV+++
Sbjct: 197 --DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW 241

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 75.3 bits (186), Expect = 3e-15
 Identities = 58/252 (23%), Positives = 96/252 (38%), Gaps = 45/252 (17%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK--TEIDIDDVRREVEIMRHL 138
                 +ELG G FG            T     +A + LK  T     D +RE E++ +L
Sbjct: 15  RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL 74

Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFD-----RIVNKGHYTERAAAAVGK-TIL 192
            +H +IV +     D D + +V E  + G+L                 +   A G+  + 
Sbjct: 75  -QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS 133

Query: 193 RIVKVCH----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC 242
           +++ +                +HRDL   N L      N  +K  DFG+S          
Sbjct: 134 QMLHIASQIASGMVYLASQHFVHRDLATRNCLV---GANLLVKIGDFGMSR--------- 181

Query: 243 EIVGSPYY------------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETE 288
           ++  + YY            M PE +  R +  E DVWS GVI++ I   G  P++  + 
Sbjct: 182 DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN 241

Query: 289 EGIAHAIIRGKI 300
             +   I +G++
Sbjct: 242 TEVIECITQGRV 253

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 75.0 bits (185), Expect = 4e-15
 Identities = 58/240 (24%), Positives = 91/240 (37%), Gaps = 49/240 (20%)

Query: 84  TFGKELGRGEFGITHQ-CFEIETGETYACK-KIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
             G+ +G G+FG  HQ  +        A   K  K    ++   +   +E   MR    H
Sbjct: 18  ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQF-DH 75

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH-- 199
           P+IV        ++ ++++MELC  GEL   +  + +            +  ++   +  
Sbjct: 76  PHIVKL-IGVITENPVWIIMELCTLGELRSFLQVRKYSL---------DLASLILYAYQL 125

Query: 200 --------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY- 250
                       +HRD+   N L    S N  +K  DFGLS +         +  S YY 
Sbjct: 126 STALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRY---------MEDSTYYK 173

Query: 251 ----------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
                     MAPE +  R +    DVW  GV ++ IL+ GV PF       +   I  G
Sbjct: 174 ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENG 233

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 74.5 bits (184), Expect = 5e-15
 Identities = 62/238 (26%), Positives = 96/238 (40%), Gaps = 50/238 (21%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE-IDIDDVRREVEIMRHLPKHP 142
           TF +E+G G+FG       +  G      K+A + ++   +  +D   E E+M  L  HP
Sbjct: 11  TFVQEIGSGQFG------LVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKL-SHP 63

Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVK-VCH 199
            +V       ++  I LV E  E G L D  R   +G +         +T+L +   VC 
Sbjct: 64  KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLR-TQRGLFAA-------ETLLGMCLDVCE 115

Query: 200 ------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY--- 250
                 E  V+HRDL   N L     EN  +K  DFG++ F         ++   Y    
Sbjct: 116 GMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRF---------VLDDQYTSST 163

Query: 251 --------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
                    +PEV     Y  + DVWS GV+++ +   G  P+   +   +   I  G
Sbjct: 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 221

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 74.6 bits (184), Expect = 6e-15
 Identities = 59/237 (24%), Positives = 87/237 (36%), Gaps = 50/237 (21%)

Query: 88  ELGRGEFGITHQ-CFEIETGETY-ACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIV 145
           ELG G FG   Q  + +   +   A K + +     + D +++ RE +IM  L  +P IV
Sbjct: 17  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQL-DNPYIV 73

Query: 146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH------ 199
                    +A+ LVME+  GG L   +V K              +  + ++ H      
Sbjct: 74  RL-IGVCQAEALMLVMEMAGGGPLHKFLVGKREEI---------PVSNVAELLHQVSMGM 123

Query: 200 ----ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY----- 250
               E   +HRDL   N L          K  DFGLS      +         YY     
Sbjct: 124 KYLEEKNFVHRDLAARNVLL---VNRHYAKISDFGLSKALGADD--------SYYTARSA 172

Query: 251 -------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
                   APE +  R +    DVWS GV ++  L  G  P+       +   I +G
Sbjct: 173 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQG 229

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105

 Score = 69.8 bits (171), Expect = 6e-15
 Identities = 12/79 (15%), Positives = 33/79 (41%), Gaps = 1/79 (1%)

Query: 446 VTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDV 505
           +   +H     +   ++Q F  FD  ++  I  +E + +          D+    +  ++
Sbjct: 11  ILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAIC-NRRVQILTDEQFDRLWNEM 69

Query: 506 DLDRDGRISFEEFKAMMTS 524
            ++  GR+ + +F +  +S
Sbjct: 70  PVNAKGRLKYPDFLSRFSS 88

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105

 Score = 66.3 bits (162), Expect = 1e-13
 Identities = 16/66 (24%), Positives = 25/66 (37%)

Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSC 442
                 I Q F   DT K   ++ EE +   N   Q ++D     L     V+  G L  
Sbjct: 20  TSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKY 79

Query: 443 DEFVTM 448
            +F++ 
Sbjct: 80  PDFLSR 85

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 74.2 bits (183), Expect = 8e-15
 Identities = 52/239 (21%), Positives = 92/239 (38%), Gaps = 52/239 (21%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE-IDIDDVRREVEIMRHLPKHP 142
           TF KELG G+FG       ++ G+      +A + +K   +  D+   E ++M +L  H 
Sbjct: 27  TFLKELGTGQFG------VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-SHE 79

Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH--- 199
            +V        +  I+++ E    G L + +    H              +++++C    
Sbjct: 80  KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRF---------QTQQLLEMCKDVC 130

Query: 200 -------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY-- 250
                      +HRDL   N L    ++   +K  DFGLS +         ++   Y   
Sbjct: 131 EAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRY---------VLDDEYTSS 178

Query: 251 ---------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
                      PEVL    +  + D+W+ GV+++ I   G  P+   T    A  I +G
Sbjct: 179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 75.5 bits (186), Expect = 1e-14
 Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 44/235 (18%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK-TEIDIDDVRREVEIMRHLPKHP 142
              K+LG G+FG                 K+A + +K   + ++    E  +M+ L +H 
Sbjct: 191 KLEKKLGAGQFGEVWM------ATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHD 243

Query: 143 NIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH--- 199
            +V    A   K+ IY++ E    G L D + +     E +   + K I    ++     
Sbjct: 244 KLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSD----EGSKQPLPKLIDFSAQIAEGMA 298

Query: 200 ---ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYY------ 250
              +   +HRDL+  N L    S +   K  DFGL+           I  + Y       
Sbjct: 299 FIEQRNYIHRDLRAANILV---SASLVCKIADFGLARV---------IEDNEYTAREGAK 346

Query: 251 -----MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRG 298
                 APE +   ++  + DVWS G+++  I+  G  P+   +   +  A+ RG
Sbjct: 347 FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG 401

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 74.6 bits (184), Expect = 1e-14
 Identities = 53/233 (22%), Positives = 81/233 (34%), Gaps = 51/233 (21%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           +   FGK LG G FG           +T    ++A + LK      + + +  E+++M  
Sbjct: 45  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFD-------------RIVNKGHYTERAA 184
           L  H NIV    A      IYL+ E C  G+L +                      E   
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164

Query: 185 AAVGKTILRIVKVCH----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF 234
                T   ++   +              +HRDL   N L    +    +K  DFGL+  
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV---THGKVVKICDFGLAR- 220

Query: 235 FKPGEQFCEIVGSPYY------------MAPEVLR-RNYGPEIDVWSAGVIIY 274
                   +I+    Y            MAPE L    Y  + DVWS G++++
Sbjct: 221 --------DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLW 265

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 72.6 bits (179), Expect = 3e-14
 Identities = 46/251 (18%), Positives = 85/251 (33%), Gaps = 46/251 (18%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
               F +ELG   FG  ++            + +A + LK        ++ R E  +   
Sbjct: 9   SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRAR 68

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFD-----RIVNKGHYTERAAAAVGK-TI 191
           L +HPN+V           + ++   C  G+L +        +    T+           
Sbjct: 69  L-QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEP 127

Query: 192 LRIVKVCH----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF 241
              V +             + V+H+DL   N L     +   +K  D GL          
Sbjct: 128 PDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV---YDKLNVKISDLGLFR-------- 176

Query: 242 CEIVGSPYY------------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAET 287
            E+  + YY            MAPE +    +  + D+WS GV+++ +   G+ P+   +
Sbjct: 177 -EVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS 235

Query: 288 EEGIAHAIIRG 298
            + +   I   
Sbjct: 236 NQDVVEMIRNR 246

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150

 Score = 68.7 bits (168), Expect = 5e-14
 Identities = 17/125 (13%), Positives = 45/125 (36%), Gaps = 16/125 (12%)

Query: 361 KQFSIMNKFKKKVLRVV-----------ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEEL 409
           K F I+   +++ L  +            +    +++   K+ +   D +  G++    L
Sbjct: 13  KAFGILKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEFDLNNEGEIDLMSL 72

Query: 410 KDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFD 469
           K  +  +G   +  ++K ++       +  +S  +FV M           +L +    F+
Sbjct: 73  KRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNM----MLGKRSAVL-KLVMMFE 127

Query: 470 KNQSG 474
              + 
Sbjct: 128 GKANE 132

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150

 Score = 66.4 bits (162), Expect = 4e-13
 Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 1/67 (1%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
             + +  FD N  G I++  LK ++ +          ++ ++ +V       IS+ +F  
Sbjct: 52  FKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKT-HLEMKKMISEVTGGVSDTISYRDFVN 110

Query: 521 MMTSGAD 527
           MM     
Sbjct: 111 MMLGKRS 117

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 72.9 bits (179), Expect = 5e-14
 Identities = 43/248 (17%), Positives = 85/248 (34%), Gaps = 50/248 (20%)

Query: 76  EGNILD-----KYTFGKELGRGEFGITHQCF-----EIETGETYACKKIAKE--KLKTEI 123
            G I+       +  G  +G+G FG  +         + +      K    +   L TE+
Sbjct: 25  VGEIITDMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTEL 84

Query: 124 DI-----DDVRREVEIMRHLPKHPNIVTYK----EAYEDKDAIYLVMELCEG---GELFD 171
                     + +  I     K+  +  Y          K   +++M+   G    ++++
Sbjct: 85  KFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYE 143

Query: 172 RIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL 231
              N   ++ +    +   IL I++  HE+  +H D+K  N L    + + Q+  +D+GL
Sbjct: 144 A--NAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPD-QVYLVDYGL 200

Query: 232 SIFFKPGEQFCEI--------VGSPYYMA------PEVLRRNYGPEIDVWSAG-VIIYIL 276
           +  + P                G+  + +          RR      D+   G  +I   
Sbjct: 201 AYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRG-----DLEILGYCMIQ-W 254

Query: 277 LCGVPPFW 284
           L G  P W
Sbjct: 255 LTGHLP-W 261

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76

 Score = 66.1 bits (162), Expect = 6e-14
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 5/67 (7%)

Query: 461 LSQAFRFFDKNQ--SGFIEVDELKEVL--LEDNAGPNGDQTIRDILRDVDLDRDGRISFE 516
           +  AF  F   +     I  +ELK V+  L  +       T+ +++ +VD + DG +SFE
Sbjct: 7   IKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKG-MSTLDEMIEEVDKNGDGEVSFE 65

Query: 517 EFKAMMT 523
           EF  MM 
Sbjct: 66  EFLVMMK 72

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 4/67 (5%)

Query: 386 MAQIKQMFYMMDTD--KNGDLTFEELKDGLNMIGQKVSDP--DVKMLMEAADVDGNGLLS 441
             +IK  F +          ++ EELK  +  +G  +      +  ++E  D +G+G +S
Sbjct: 4   PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVS 63

Query: 442 CDEFVTM 448
            +EF+ M
Sbjct: 64  FEEFLVM 70

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147

 Score = 68.4 bits (167), Expect = 6e-14
 Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 4/119 (3%)

Query: 409 LKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFF 468
           +    ++ G K          E  +      L   ++        ++   +     +  F
Sbjct: 1   MSQSRDLQGGKAFGLLKAQQEERLEGINKQFLDDPKYSNDEDLPSKL---EAFKVKYMEF 57

Query: 469 DKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGAD 527
           D N +G I++  LK +L +          ++ ++R+V    +   S+ +F  MM     
Sbjct: 58  DLNGNGDIDIMSLKRMLEKLGVPKT-HLELKRLIREVSSGSEETFSYSDFLRMMLGKRS 115

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147

 Score = 67.2 bits (164), Expect = 2e-13
 Identities = 23/160 (14%), Positives = 52/160 (32%), Gaps = 19/160 (11%)

Query: 342 KNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKN 401
           ++ +     + G     + ++   +NK      +   D     ++   K  +   D + N
Sbjct: 3   QSRDLQGGKAFGLLKAQQEERLEGINKQFLDDPKYSNDEDLPSKLEAFKVKYMEFDLNGN 62

Query: 402 GDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDIL 461
           GD+    LK  L  +G   +  ++K L+           S  +F+ M             
Sbjct: 63  GDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRM------------- 109

Query: 462 SQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDI 501
                     +S  + +  + E   +++  P G    + I
Sbjct: 110 ------MLGKRSAILRMILMYEEKNKEHKRPTGPPAKKAI 143

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 71.5 bits (176), Expect = 7e-14
 Identities = 55/242 (22%), Positives = 92/242 (38%), Gaps = 52/242 (21%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK-TEIDIDDVRREVEIMRHLP 139
           +     + LG G+FG          G      K+A + LK   +  D    E  +M+ L 
Sbjct: 13  ETLKLVERLGAGQFGEVWM------GYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL- 65

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +H  +V    A   ++ IY++ E  E G L D +        +  + +  TI +++ +  
Sbjct: 66  QHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFL--------KTPSGIKLTINKLLDMAA 116

Query: 200 ----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
                     E   +HRDL+  N L    S+    K  DFGL+           I  + Y
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARL---------IEDNEY 164

Query: 250 Y-----------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAII 296
                        APE +    +  + DVWS G+++  I+  G  P+   T   +   + 
Sbjct: 165 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE 224

Query: 297 RG 298
           RG
Sbjct: 225 RG 226

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 71.2 bits (175), Expect = 1e-13
 Identities = 58/244 (23%), Positives = 90/244 (36%), Gaps = 53/244 (21%)

Query: 84  TFGKELGRGEFGITHQ-CFEIETGETY---ACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           T  K +G GEFG  ++   +  +G+     A K + K    TE    D   E  IM    
Sbjct: 47  TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL-KAGY-TEKQRVDFLGEAGIMGQF- 103

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKV 197
            H NI+  +        + ++ E  E G L    R    G +          ++L++V +
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLR-EKDGEF----------SVLQLVGM 152

Query: 198 CH----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS 247
                           +HRDL   N L    + N   K  DFGLS       +  E    
Sbjct: 153 LRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLS-------RVLEDDPE 202

Query: 248 PYY-----------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHA 294
             Y            APE +  R +    DVWS G++++ ++  G  P+W  +   +  A
Sbjct: 203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKA 262

Query: 295 IIRG 298
           I  G
Sbjct: 263 INDG 266

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 70.8 bits (174), Expect = 1e-13
 Identities = 49/245 (20%), Positives = 91/245 (37%), Gaps = 54/245 (22%)

Query: 84  TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRHLPK 140
              + +G+G FG+ +    I+  +     + A + L        ++   RE  +MR L  
Sbjct: 24  HSDRVIGKGHFGVVYHGEYIDQAQNR--IQCAIKSLSRITEMQQVEAFLREGLLMRGL-N 80

Query: 141 HPNIVT-YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           HPN++         +   ++++     G+L   I +              T+  ++    
Sbjct: 81  HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQR---------NPTVKDLISFGL 131

Query: 200 ----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
                     E   +HRDL   N +     E+  +K  DFGL+          +I+   Y
Sbjct: 132 QVARGMEYLAEQKFVHRDLAARNCML---DESFTVKVADFGLAR---------DILDREY 179

Query: 250 Y--------------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAH 293
           Y               A E L+   +  + DVWS GV+++ +L  G PP+       + H
Sbjct: 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTH 239

Query: 294 AIIRG 298
            + +G
Sbjct: 240 FLAQG 244

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 71.2 bits (175), Expect = 1e-13
 Identities = 57/242 (23%), Positives = 82/242 (33%), Gaps = 50/242 (20%)

Query: 84  TFGKELGRGEFGITHQ-CFEIETGETYACK-KIAKEKLKTEIDIDDVRREVEIMRHLPKH 141
              K +G G+ G        +          K  K    TE    D   E  IM     H
Sbjct: 52  HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQF-DH 109

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKVCH 199
           PNI+  +          +V E  E G L    R  + G +          TI+++V +  
Sbjct: 110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR-THDGQF----------TIMQLVGMLR 158

Query: 200 ----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPY 249
                     + G +HRDL   N L      N   K  DFGLS   +             
Sbjct: 159 GVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDDPD-------AA 208

Query: 250 Y-----------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAII 296
           Y            APE +  R +    DVWS GV+++ +L  G  P+W  T   +  ++ 
Sbjct: 209 YTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE 268

Query: 297 RG 298
            G
Sbjct: 269 EG 270

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 70.0 bits (172), Expect = 2e-13
 Identities = 55/259 (21%), Positives = 94/259 (36%), Gaps = 54/259 (20%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
                GK LG GEFG   +              +A + LK   +  ++ D+  E  +++ 
Sbjct: 23  KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFD-----RIVNKGHYTERAAAAVGK--- 189
           +  HP+++    A      + L++E  + G L       R V  G+     +        
Sbjct: 83  V-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141

Query: 190 ------TILRIVKVCH----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI 233
                 T+  ++              E  ++HRDL   N L    +E  ++K  DFGLS 
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV---AEGRKMKISDFGLSR 198

Query: 234 FFKPGEQFCEIVGSPYY------------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCG 279
                    ++     Y            MA E L    Y  + DVWS GV+++ I+  G
Sbjct: 199 ---------DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249

Query: 280 VPPFWAETEEGIAHAIIRG 298
             P+     E + + +  G
Sbjct: 250 GNPYPGIPPERLFNLLKTG 268

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Length = 143

 Score = 66.5 bits (162), Expect = 3e-13
 Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 26/117 (22%)

Query: 407 EELKDGLNMIGQKVSDPDVKM-LMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAF 465
           E L+  +N    ++S  ++++   +  D DGN LL   E  T   H+ +    +      
Sbjct: 51  EHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSE------ 104

Query: 466 RFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM 522
                 Q+  +  DEL  +             I  +LRD D + DG I + EF   +
Sbjct: 105 ------QAPLMSEDELINI-------------IDGVLRDDDKNNDGYIDYAEFAKSL 142

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 70.1 bits (172), Expect = 4e-13
 Identities = 55/244 (22%), Positives = 92/244 (37%), Gaps = 54/244 (22%)

Query: 84  TFGKELGRGEFGITHQ-CFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRHLP 139
           +  K +G GEFG       ++ + +  +    A + LK   TE    D   E  IM    
Sbjct: 48  SIDKVVGAGEFGEVCSGRLKLPSKKEISV---AIKTLKVGYTEKQRRDFLGEASIMGQF- 103

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFD--RIVNKGHYTERAAAAVGKTILRIVKV 197
            HPNI+  +        + +V E  E G L    R  +   +          T++++V +
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQF----------TVIQLVGM 152

Query: 198 CH----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS 247
                       + G +HRDL   N L    + N   K  DFGL        +  E    
Sbjct: 153 LRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLG-------RVLEDDPE 202

Query: 248 PYY-----------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHA 294
             Y            +PE +  R +    DVWS G++++ ++  G  P+W  + + +  A
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262

Query: 295 IIRG 298
           +  G
Sbjct: 263 VDEG 266

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 69.6 bits (171), Expect = 4e-13
 Identities = 53/259 (20%), Positives = 88/259 (33%), Gaps = 54/259 (20%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           +   + +++G G FG   Q              +A + LK   +     D +RE  +M  
Sbjct: 47  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFD-----RIVNKGHYTERAAAAVGK--- 189
              +PNIV           + L+ E    G+L +             +    +   +   
Sbjct: 107 F-DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 165

Query: 190 ------TILRIVKVCH----------ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI 233
                 +    + +            E   +HRDL   N L     EN  +K  DFGLS 
Sbjct: 166 PGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV---GENMVVKIADFGLSR 222

Query: 234 FFKPGEQFCEIVGSPYY------------MAPEVLR-RNYGPEIDVWSAGVIIY-ILLCG 279
                     I  + YY            M PE +    Y  E DVW+ GV+++ I   G
Sbjct: 223 ---------NIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG 273

Query: 280 VPPFWAETEEGIAHAIIRG 298
           + P++    E + + +  G
Sbjct: 274 LQPYYGMAHEEVIYYVRDG 292

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 66.8 bits (162), Expect = 1e-11
 Identities = 80/619 (12%), Positives = 171/619 (27%), Gaps = 199/619 (32%)

Query: 57  NVDKKSISFQLRSVVSNPAEGNILD--------KYTFGKELGRGEFGITHQCFEIETGET 108
           N D K +    +S++S     +I+            F   L + E  +  +  E      
Sbjct: 32  NFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQE-EMVQKFVEEVLRIN 90

Query: 109 YA--CKKIAKEKLKTEIDIDDVRREVEIM---------RHLPKHPNIVTYKEA-YEDKDA 156
           Y      I  E+ +  +       + + +          ++ +    +  ++A  E + A
Sbjct: 91  YKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPA 150

Query: 157 IYLV---MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENF 213
             ++   +     G                    GKT +  + VC          K +  
Sbjct: 151 KNVLIDGV----LG-------------------SGKTWV-ALDVC-------LSYKVQCK 179

Query: 214 LFADG----------SENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEV---LRR-- 258
                          S  + L+ +   L           +   +       +   LRR  
Sbjct: 180 -MDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238

Query: 259 ---NYGPE---I--DVWSAGVIIY------ILLCGVPPFWAET--EEGIAHAI---IRGK 299
               Y      +  +V +A           ILL         T   + +   +       
Sbjct: 239 KSKPY-ENCLLVLLNVQNAKAWNAFNLSCKILL---------TTRFKQVTDFLSAATTTH 288

Query: 300 IDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGG----N 355
           I  +         E K L+   LD      L  E +  NP          +S+      +
Sbjct: 289 ISLDHHSMTLTPDEVKSLLLKYLD-CRPQDLPREVLTTNPRR--------LSIIAESIRD 339

Query: 356 VTSRIKQFSIMNKFK-KKVLRVVADNLPQDQMAQIKQMFYMMDTDKN----------GDL 404
             +    +  +N  K   ++    + L   +  ++     +     +           D+
Sbjct: 340 GLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDV 399

Query: 405 TFEELKDGLNMIGQK-----------VSDPDV---------------KMLME------AA 432
              ++   +N + +            +S P +               + +++        
Sbjct: 400 IKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTF 459

Query: 433 DVDGNGLLSCDE--FVTMSVHLKRIGNDDILSQAFR--FFDKNQSGFIEVDELKEVLLED 488
           D D       D+  +  +  HLK I + + ++  FR  F D     F+E    K  +  D
Sbjct: 460 DSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTL-FRMVFLDFR---FLEQ---K--IRHD 510

Query: 489 NAGPNGDQTIRDILRDV----------DLDRDGRI-SFEEF------------------K 519
           +   N   +I + L+ +          D   +  + +  +F                   
Sbjct: 511 STAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRI 570

Query: 520 AMMT-SGADWKMASRQYSR 537
           A+M    A ++ A +Q  R
Sbjct: 571 ALMAEDEAIFEEAHKQVQR 589

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174

 Score = 61.9 bits (150), Expect = 2e-11
 Identities = 21/143 (14%), Positives = 45/143 (31%), Gaps = 16/143 (11%)

Query: 388 QIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPD------VKMLMEAADVDGNGLLS 441
                   +   +  D+   +L+  LN         D       + L+   ++  NG L 
Sbjct: 6   HHHHHSSGL-VPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLD 64

Query: 442 CDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVL--LEDNAGPNGDQTIR 499
            +EF  +   L            F+    +  G +   +L + +   +   G    + + 
Sbjct: 65  QEEFARLWKRLVH------YQHVFQKVQTS-PGVLLSSDLWKAIENTDFLRGIFISRELL 117

Query: 500 DILRDVDLDRDGRISFEEFKAMM 522
            ++     D  GR+SF      +
Sbjct: 118 HLVTLRYSDSVGRVSFPSLVCFL 140

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174

 Score = 49.2 bits (117), Expect = 5e-07
 Identities = 14/96 (14%), Positives = 31/96 (32%), Gaps = 10/96 (10%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVS---DPDVKMLMEAADVDGNGLL 440
            ++   + +F  +     G L   +L   +             ++  L+     D  G +
Sbjct: 73  KRLVHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYSDSVGRV 131

Query: 441 SCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
           S    V   + L+       +++ FR   K+  G  
Sbjct: 132 SFPSLVCFLMRLEA------MAKTFRNLSKDGKGLY 161

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174

 Score = 42.2 bits (99), Expect = 1e-04
 Identities = 10/81 (12%), Positives = 28/81 (34%), Gaps = 7/81 (8%)

Query: 462 SQAFRFFDK--NQSGFIEVDELKEVLLEDNAGPNGDQ-----TIRDILRDVDLDRDGRIS 514
                       +   I+  +L+ +L ++               R ++  ++L  +GR+ 
Sbjct: 5   HHHHHHSSGLVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLD 64

Query: 515 FEEFKAMMTSGADWKMASRQY 535
            EEF  +      ++   ++ 
Sbjct: 65  QEEFARLWKRLVHYQHVFQKV 85

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95

 Score = 57.4 bits (139), Expect = 1e-10
 Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 3/72 (4%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           +   + A+  ++F   D D +G ++  E+++    +   +    +  +    D    G L
Sbjct: 4   VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREI--FLKTGLPSTLLAHIWSLCDTKDCGKL 61

Query: 441 SCDEFVTMSVHL 452
           S D+F     HL
Sbjct: 62  SKDQFALA-FHL 72

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95

 Score = 50.9 bits (122), Expect = 2e-08
 Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 463 QAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM 522
           + F   DK+  GF+   E++E+ L+          +  I    D    G++S ++F    
Sbjct: 14  EIFLKTDKDMDGFVSGLEVREIFLKTGLP---STLLAHIWSLCDTKDCGKLSKDQFALAF 70

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92

 Score = 55.9 bits (135), Expect = 4e-10
 Identities = 17/80 (21%), Positives = 31/80 (38%), Gaps = 4/80 (5%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           +  +Q       F  +  D NG +     K+        +   ++  + E +D D +G L
Sbjct: 3   ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGAL 60

Query: 441 SCDEFVTMS--VHLKRIGND 458
           + DEF      V  ++ G D
Sbjct: 61  TLDEFCAAFHLVVARKNGYD 80

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92

 Score = 50.5 bits (121), Expect = 3e-08
 Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 3/60 (5%)

Query: 463 QAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM 522
             F+    + +GFI     KE   +          +  I    D D+DG ++ +EF A  
Sbjct: 13  NQFKTIQPDLNGFIPGSAAKEFFTKSKLP---ILELSHIWELSDFDKDGALTLDEFCAAF 69

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900

 Score = 60.9 bits (147), Expect = 8e-10
 Identities = 28/146 (19%), Positives = 60/146 (41%), Gaps = 19/146 (13%)

Query: 382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPD--------VKMLMEAAD 433
             ++  Q +++F  +    + +++  EL + LN +  +  D           + ++   D
Sbjct: 726 ESEEERQFRKLFVQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMD 784

Query: 434 VDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN 493
            D  G L  +EF  +  ++K+          ++ F+ ++SG I  +EL      + AG +
Sbjct: 785 SDTTGKLGFEEFKYLWNNIKK------WQGIYKRFETDRSGTIGSNELPGAF--EAAGFH 836

Query: 494 -GDQTIRDILRDVDLDRDGRISFEEF 518
                   I+R    D  G + F+ F
Sbjct: 837 LNQHIYSMIIRRYS-DETGNMDFDNF 861

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900

 Score = 55.9 bits (134), Expect = 2e-08
 Identities = 25/182 (13%), Positives = 55/182 (30%), Gaps = 36/182 (19%)

Query: 390 KQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMS 449
             +F   D DK+G ++  E++  +   G K+     ++++     D   ++  D FV   
Sbjct: 610 LTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCL 668

Query: 450 VHLKRIGNDDILSQAFRFFDKNQSGFI----------------------EVDELKEVLLE 487
           V L+       L + F+  D   +G I                                 
Sbjct: 669 VRLEI------LFKIFKQLDPENTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNI 722

Query: 488 DNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG------ADWKMASRQYSRAMMS 541
           +      ++  R +   +    D  +S  E   ++                    R+M++
Sbjct: 723 EANESEEERQFRKLFVQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVA 781

Query: 542 AL 543
            +
Sbjct: 782 VM 783

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900

 Score = 54.8 bits (131), Expect = 7e-08
 Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 17/145 (11%)

Query: 382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPD--------VKMLMEAAD 433
            ++     K +F  +    + +++ +EL+  LN I  K  D           + ++   D
Sbjct: 529 EEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMD 587

Query: 434 VDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN 493
            DGNG L   EF  +   ++           FR FD ++SG +   E++  +  + AG  
Sbjct: 588 RDGNGKLGLVEFNILWNRIRN------YLTIFRKFDLDKSGSMSAYEMRMAI--EAAGFK 639

Query: 494 GDQTIRDILRDVDLDRDGRISFEEF 518
               +  ++     D +  I F+ F
Sbjct: 640 LPCQLHQVIVARFADDELIIDFDNF 664

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900

 Score = 47.8 bits (113), Expect = 1e-05
 Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 7/96 (7%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
           + + + + ++   +TD++G +   EL       G  ++     M++     D  G +  D
Sbjct: 801 NNIKKWQGIYKRFETDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYS-DETGNMDFD 859

Query: 444 EFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVD 479
            F++  V L        + +AFR  DKN +G I+V+
Sbjct: 860 NFISCLVRLDA------MFRAFRSLDKNGTGQIQVN 889

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110

 Score = 55.5 bits (134), Expect = 9e-10
 Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           + ++Q       F  +  D +  ++    K+        +S P++  + E +D D +G L
Sbjct: 16  ITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSDADCDGAL 73

Query: 441 SCDEFVTMS--VHLKRIGND 458
           +  EF      +  ++ G  
Sbjct: 74  TLPEFCAAFHLIVARKNGYP 93

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110

 Score = 49.0 bits (117), Expect = 1e-07
 Identities = 14/60 (23%), Positives = 19/60 (31%), Gaps = 3/60 (5%)

Query: 463 QAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM 522
             FR    + S FI     K    +          +  I    D D DG ++  EF A  
Sbjct: 26  NQFRSLQPDPSSFISGSVAKNFFTKSKLS---IPELSYIWELSDADCDGALTLPEFCAAF 82

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111

 Score = 55.2 bits (133), Expect = 1e-09
 Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 4/80 (5%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           +PQ    + +Q+F   D   +G LT  + +  L      +    +  +   +D+D +G L
Sbjct: 8   VPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQ--SSLPQAQLASIWNLSDIDQDGKL 65

Query: 441 SCDEFVTMS--VHLKRIGND 458
           + +EF+     + +   G  
Sbjct: 66  TAEEFILAMHLIDVAMSGQP 85

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111

 Score = 51.3 bits (123), Expect = 3e-08
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 463 QAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM 522
           Q F   DK  SG +   + + +L++ +        +  I    D+D+DG+++ EEF   M
Sbjct: 18  QLFNSHDKTMSGHLTGPQARTILMQSSLP---QAQLASIWNLSDIDQDGKLTAEEFILAM 74

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624

 Score = 59.5 bits (143), Expect = 2e-09
 Identities = 36/174 (20%), Positives = 68/174 (39%), Gaps = 13/174 (7%)

Query: 380 NLPQDQMAQ--IKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           ++ Q Q  Q  I       D +K+  + F+ELKD L  +  +V D   + +    D    
Sbjct: 2   SMDQRQKLQHWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQT 61

Query: 438 GLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLL----EDNAGPN 493
             L  +E  T     K +     + +AF     +    + V+ L   L     E+ AGP 
Sbjct: 62  DSLEDEEIETF---YKMLTQRAEIDRAFEEAAGSAE-TLSVERLVTFLQHQQREEEAGPA 117

Query: 494 GDQTIRDILRDVDLDR-DGRISFEEFKAMMTS--GADWKMASRQYSRAMMSALS 544
              ++ +     +  +   +++ + F   + S  G  + +A R+  + M   LS
Sbjct: 118 LALSLIERYEPSETAKAQRQMTKDGFLMYLLSADGNAFSLAHRRVYQDMDQPLS 171

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 56.9 bits (137), Expect = 7e-09
 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 4/95 (4%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK---TEIDIDDVRREVEIMRH 137
           D+   GK LGRG FG   +       +T  C+ +A + LK   T  +   +  E++I+ H
Sbjct: 22  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 81

Query: 138 LPKHPNIVTYKEAY-EDKDAIYLVMELCEGGELFD 171
           +  H N+V    A  +    + +++E C+ G L  
Sbjct: 82  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST 116

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 54.5 bits (130), Expect = 3e-08
 Identities = 45/309 (14%), Positives = 89/309 (28%), Gaps = 73/309 (23%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEK-----LKTEIDIDDVRREVEIM 135
           +K    +++G G FG   Q   I      A K IA E         +   +++  E+ I 
Sbjct: 20  EKLQRCEKIGEGVFGEVFQT--IADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIIS 77

Query: 136 RHL--------PKHPNIVTYKEAY------------------------------EDKDAI 157
           + L         +    +     +                                 D +
Sbjct: 78  KELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQL 137

Query: 158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN-GVMHRDLKPENFLFA 216
           ++V+E   GG   +++  K   +   A ++   +   + V   +    HRDL   N L  
Sbjct: 138 FIVLEFEFGGIDLEQMRTK-LSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLK 196

Query: 217 DGSENS-----------------QLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRN 259
             S                    Q+  ID+ LS   + G     +V     M  ++   +
Sbjct: 197 KTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----IVVFCDVSMDEDLFTGD 252

Query: 260 YGPEIDVWS-AGVIIYILLCGVPP----FWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
              + D++               P     W           +  K         ++ ++ 
Sbjct: 253 GDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKI 312

Query: 315 KELVKNMLD 323
           +E  + ML+
Sbjct: 313 QEFHRTMLN 321

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 51.8 bits (125), Expect = 3e-07
 Identities = 55/270 (20%), Positives = 95/270 (35%), Gaps = 58/270 (21%)

Query: 38  SSKKPSPSPKHESVSKHASNVDKKSISF-QLRSVVSNPAEGNILDKYTFGKELGRGEFGI 96
              K + S      S +    +   +    L    +N     ++         G G FG 
Sbjct: 4   KYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLI---------GHGVFGK 54

Query: 97  THQCFEIETGETYACKKIAKEKL------KTEIDIDDVRREVEIMR-HLPKHPNIVT--- 146
            ++   +  G   A K+   E        +TEI+         +       HP++V+   
Sbjct: 55  VYKGV-LRDGAKVALKRRTPESSQGIEEFETEIET--------LSFCR---HPHLVSLIG 102

Query: 147 YKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTER----------AAAAVGKTILRIVK 196
           +    ++++ + L+ +  E G L   +      T              AA G   L    
Sbjct: 103 F---CDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL---- 155

Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF---CEIVGSPYYMAP 253
             H   ++HRD+K  N L     EN   K  DFG+S      +Q      + G+  Y+ P
Sbjct: 156 --HTRAIIHRDVKSINILL---DENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDP 210

Query: 254 EVLRRNYGPE-IDVWSAGVIIYILLCGVPP 282
           E   +    E  DV+S GV+++ +LC    
Sbjct: 211 EYFIKGRLTEKSDVYSFGVVLFEVLCARSA 240

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} Length = 179

 Score = 48.5 bits (115), Expect = 9e-07
 Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 11/109 (10%)

Query: 390 KQMFYMMDTDKN---GDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFV 446
            QMF  +   +      LT +ELKD    +  +  D  ++   +  D + +G L+ +E  
Sbjct: 62  VQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVK 121

Query: 447 TMSVHLKRIGNDDILSQ--------AFRFFDKNQSGFIEVDELKEVLLE 487
            +            + +             D    G+IE+++L+ +LL+
Sbjct: 122 EIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQ 170

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} Length = 179

 Score = 40.8 bits (95), Expect = 3e-04
 Identities = 30/119 (25%), Positives = 45/119 (37%), Gaps = 19/119 (15%)

Query: 437 NGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFD------KNQSGFIEVDELKEVLLEDNA 490
           +G+L    F       K IG D     A + FD            +  DELK+   E   
Sbjct: 40  DGVLLRSRFG------KCIGMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFY-EQLT 92

Query: 491 GPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASR------QYSRAMMSAL 543
               D  +R     VD + DGR++ EE K ++   A     S+      +Y+  +M  L
Sbjct: 93  DQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEEL 151

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Length = 103

 Score = 46.5 bits (110), Expect = 9e-07
 Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 15/79 (18%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLE------DNAGPNGDQTIRD---------ILRDV 505
               F   D N  G ++  EL+ +  +      D      D    +         ++++V
Sbjct: 22  PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNV 81

Query: 506 DLDRDGRISFEEFKAMMTS 524
           D ++D  ++ EEF A    
Sbjct: 82  DTNQDRLVTLEEFLASTQR 100

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Length = 103

 Score = 40.7 bits (95), Expect = 1e-04
 Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 16/83 (19%)

Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPD----------------VK 426
                  K  F + D + +G L  +EL+       +KV DP                  +
Sbjct: 16  DPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMRE 75

Query: 427 MLMEAADVDGNGLLSCDEFVTMS 449
            +M+  D + + L++ +EF+  +
Sbjct: 76  HVMKNVDTNQDRLVTLEEFLAST 98

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L Length = 714

 Score = 50.2 bits (119), Expect = 2e-06
 Identities = 25/145 (17%), Positives = 60/145 (41%), Gaps = 16/145 (11%)

Query: 382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPD--------VKMLMEAAD 433
            ++ +    +  +     ++ +++  EL+  L  +  K  D           K++++  D
Sbjct: 526 NEEDIGDGFRRLFAQLAGEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLD 585

Query: 434 VDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN 493
            DG+G L   EF  +   +++        + +R  D ++SG +   E+++ L  + AG  
Sbjct: 586 EDGSGKLGLKEFYILWTKIQK------YQKIYREIDVDRSGTMNSYEMRKAL--EEAGFK 637

Query: 494 GDQTIRDILRDVDLDRDGRISFEEF 518
               +  ++     D +  I F+ F
Sbjct: 638 LPCQLHQVIVARFADDELIIDFDNF 662

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L Length = 714

 Score = 49.0 bits (116), Expect = 3e-06
 Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 7/90 (7%)

Query: 390 KQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMS 449
           ++++  +D D++G +   E++  L   G K+    +  ++ A   D   ++  D FV   
Sbjct: 608 QKIYREIDVDRSGTMNSYEMRKALEEAGFKLP-CQLHQVIVARFADDELIIDFDNFVRCL 666

Query: 450 VHLKRIGNDDILSQAFRFFDKNQSGFIEVD 479
           V L+      IL + F+  D   +G I++D
Sbjct: 667 VRLE------ILFKIFKQLDPENTGTIQLD 690

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99

 Score = 45.6 bits (108), Expect = 2e-06
 Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 3/60 (5%)

Query: 463 QAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM 522
           + +R  +   +G +   +    L +       D  +  I    D D  G +S +EF   +
Sbjct: 15  KYYRQVEAGNTGRVLALDAAAFLKKSGLP---DLILGKIWDLADTDGKGVLSKQEFFVAL 71

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99

 Score = 42.9 bits (101), Expect = 2e-05
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 391 QMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
           + +  ++    G +   +    L   G  + D  +  + + AD DG G+LS  EF   
Sbjct: 15  KYYRQVEAGNTGRVLALDAAAFLKKSG--LPDLILGKIWDLADTDGKGVLSKQEFFVA 70

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Length = 863

 Score = 48.7 bits (115), Expect = 4e-06
 Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 2/114 (1%)

Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           A  + Q+QM + +  F   D  K G +  E+ +  L  +G  + + +   +M   D +  
Sbjct: 716 AKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRM 775

Query: 438 GLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNA 490
           G+++   F+  MS         D +  +F+    +   +I VDEL+  L  D A
Sbjct: 776 GVVTFQAFIDFMSRETADTDTADQVMASFKILAGD-KNYITVDELRRELPPDQA 828

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Length = 863

 Score = 43.4 bits (101), Expect = 2e-04
 Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
              +F  FD+ ++G ++ ++ +  L+       G+     I+  VD +R G ++F+ F  
Sbjct: 727 FRASFNHFDRKKTGMMDCEDFRACLISMGY-NMGEAEFARIMSIVDPNRMGVVTFQAFID 785

Query: 521 MMT 523
            M+
Sbjct: 786 FMS 788

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 47.5 bits (114), Expect = 5e-06
 Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 30/149 (20%)

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF---CEIVGSPYYMAPEV 255
           HEN  +HRD+K  N L  D +  +++   DFGL+   +   Q      IVG+  YMAPE 
Sbjct: 150 HENHHIHRDIKSANILL-DEAFTAKIS--DFGLARASEKFAQTVMTSRIVGTTAYMAPEA 206

Query: 256 LRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP-----WPKV 310
           LR    P+ D++S GV++  ++ G+P                  +D  R+P       + 
Sbjct: 207 LRGEITPKSDIYSFGVVLLEIITGLPA-----------------VDEHREPQLLLDIKEE 249

Query: 311 SKEAKELVKNMLDP--NPYNRLTLEEVLE 337
            ++ ++ +++ +D   N  +  ++E +  
Sbjct: 250 IEDEEKTIEDYIDKKMNDADSTSVEAMYS 278

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121

 Score = 44.8 bits (106), Expect = 5e-06
 Identities = 14/80 (17%), Positives = 34/80 (42%), Gaps = 5/80 (6%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           +  ++ A+  Q F+ +    +G +T ++ ++        +  P +  +   AD++ +G +
Sbjct: 27  ITVEERAKHDQQFHSLK-PISGFITGDQARNFFFQ--SGLPQPVLAQIWALADMNNDGRM 83

Query: 441 SCDEFVTMS--VHLKRIGND 458
              EF      + LK  G  
Sbjct: 84  DQVEFSIAMKLIKLKLQGYQ 103

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106

 Score = 44.4 bits (105), Expect = 7e-06
 Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 5/80 (6%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           +  +  A+   +F  +    NG L+ +++K  L     K+    +  + E +D+D +G+L
Sbjct: 9   VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLN--SKLPVDILGRVWELSDIDHDGML 65

Query: 441 SCDEFVTMS--VHLKRIGND 458
             DEF      V+       
Sbjct: 66  DRDEFAVAMFLVYCALEKEP 85

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106

 Score = 38.2 bits (89), Expect = 8e-04
 Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 4/60 (6%)

Query: 463 QAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM 522
             F       +GF+  D++K VLL           +  +    D+D DG +  +EF   M
Sbjct: 19  AIFDSLSPV-NGFLSGDKVKPVLLNSKLP---VDILGRVWELSDIDHDGMLDRDEFAVAM 74

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 Length = 78

 Score = 41.2 bits (97), Expect = 4e-05
 Identities = 13/55 (23%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 473 SGFIEVDELKEVLLEDNAGPNGDQ-TIRDILRDVDLDRDGRISFEEFKAMMTSGA 526
              +  +ELK+++  +         T+ D+ +++D + DG +SFEEF+ ++   +
Sbjct: 23  PNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKIS 77

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A Length = 92

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 479 DELKEVLL-EDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
            ELKE++  E   G   + +I D+++ +D + D  I F+E+   +T 
Sbjct: 32  KELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYSVFLTM 78

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A Length = 96

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 13/65 (20%), Positives = 31/65 (47%), Gaps = 5/65 (7%)

Query: 464 AFRFFDKNQSGFIEVDELKEVL---LEDNAGPNGDQ-TIRDILRDVDLDRDGRISFEEFK 519
            F  F  +  G++  ++L+ ++            D   +  I++D+D  RDG++ F+ F 
Sbjct: 14  TFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFF 72

Query: 520 AMMTS 524
           +++  
Sbjct: 73  SLIAG 77

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A Length = 100

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 6/67 (8%)

Query: 463 QAFRFFDKNQSGFIEVDELKEVLLEDNAG-----PNGDQTIRDILRDVDLDRDGRISFEE 517
             +          I     +E +L+             +    +++++D + DGRISF+E
Sbjct: 18  YKYVSKYSLVKNKISKSSFRE-MLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDE 76

Query: 518 FKAMMTS 524
           +  ++  
Sbjct: 77  YWTLIGG 83

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A Length = 93

 Score = 38.6 bits (90), Expect = 5e-04
 Identities = 10/49 (20%), Positives = 27/49 (55%)

Query: 476 IEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           +  D+LK++L  ++      +      +++D++ DG ++F+EF  ++  
Sbjct: 29  VYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIK 77

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* Length = 93

 Score = 38.3 bits (89), Expect = 6e-04
 Identities = 10/60 (16%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 469 DKNQSGFIEVDELKEVLLED----NAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
            +     +   ELKE+L  +          +   + ++ ++D +RD  + F+E+   ++ 
Sbjct: 22  KEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 81

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* Length = 540

 Score = 41.2 bits (97), Expect = 8e-04
 Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 13/80 (16%)

Query: 153 DKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPEN 212
           D D   ++M    G    D I +      +    VGK         H+N V+H DL   N
Sbjct: 410 DLDNKRIMMSYINGKLAKDVIEDNLDIAYKIGEIVGK--------LHKNDVIHNDLTTSN 461

Query: 213 FLFADGSENSQLKAIDFGLS 232
           F+F        L  IDFGL 
Sbjct: 462 FIFDK-----DLYIIDFGLG 476

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	586
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	100.0
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	99.97
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	99.97
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	99.96
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	99.95
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	99.94
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.94
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	99.94
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	99.93
1y1x_A	191	Leishmania major homolog of programmed cell death	99.93
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	99.93
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	99.93
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	99.93
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	99.92
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	99.92
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	99.92
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	99.92
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	99.92
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	99.91
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	99.91
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.91
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	99.91
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	99.9
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	99.89
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	99.89
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	99.89
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	99.89
2jnf_A	158	Troponin C; stretch activated muscle contraction,	99.89
3fwb_A	161	Cell division control protein 31; gene gating, com	99.89
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	99.89
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	99.89
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	99.89
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	99.89
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	99.89
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	99.89
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	99.89
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	99.88
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	99.88
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	99.88
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	99.88
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	99.87
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	99.87
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	99.87
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	99.87
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	99.87
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	99.87
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	99.87
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	99.87
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	99.87
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	99.86
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	99.86
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	99.86
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	99.86
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	99.86
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	99.86
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	99.86
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	99.86
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	99.85
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	99.85
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	99.85
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	99.85
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	99.85
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	99.85
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	99.85
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	99.84
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	99.84
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	99.84
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	99.84
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	99.84
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	99.84
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	99.84
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	99.84
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	99.84
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	99.84
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	99.83
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	99.83
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	99.83
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	99.83
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	99.83
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	99.83
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	99.83
2jnf_A	158	Troponin C; stretch activated muscle contraction,	99.83
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	99.83
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	99.82
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	99.82
3fwb_A	161	Cell division control protein 31; gene gating, com	99.82
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	99.82
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.82
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	99.82
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	99.82
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	99.82
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	99.81
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	99.81
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	99.81
1y1x_A	191	Leishmania major homolog of programmed cell death	99.81
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	99.81
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	99.81
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	99.81
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	99.81
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	99.81
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	99.81
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	99.81
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	99.81
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	99.81
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	99.8
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	99.8
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	99.8
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	99.8
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	99.8
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	99.8
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	99.79
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	99.79
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	99.79
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	99.79
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	99.79
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	99.79
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	99.79
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	99.79
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	99.79
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	99.79
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	99.79
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	99.78
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	99.78
2hps_A	186	Coelenterazine-binding protein with bound coelent;	99.78
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	99.78
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	99.77
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	99.77
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	99.77
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	99.77
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	99.77
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	99.77
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	99.76
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	99.76
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	99.76
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	99.76
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	99.76
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	99.76
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	99.76
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	99.76
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	99.76
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	99.76
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	99.76
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	99.76
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	99.76
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.75
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	99.75
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	99.75
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	99.75
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	99.75
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	99.74
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	99.74
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	99.74
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	99.74
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	99.74
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	99.74
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	99.73
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.72
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	99.72
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.72
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	99.72
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	99.72
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	99.71
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	99.7
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	99.7
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.7
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	99.69
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	99.69
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	99.68
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.68
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	99.68
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	99.68
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	99.67
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	99.67
2hps_A	186	Coelenterazine-binding protein with bound coelent;	99.66
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	99.66
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	99.66
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	99.65
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	99.65
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	99.65
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	99.64
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	99.63
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	99.61
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	99.6
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	99.6
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	99.59
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	99.58
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	99.57
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	99.54
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	99.53
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	99.53
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	99.51
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.5
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	99.5
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	99.5
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	99.5
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	99.47
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.46
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	99.46
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	99.45
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	99.43
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	99.42
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	99.4
2kld_A	123	Polycystin-2; PC2, PKD2, calcium binding domain, E	99.4
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	99.39
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	99.39
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.38
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	99.38
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	99.37
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	99.37
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	99.32
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	99.32
1eg3_A	261	Dystrophin; EF-hand like domain, WW domain, struct	99.31
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	99.3
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	99.26
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	99.26
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	99.25
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	99.23
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	99.22
2kld_A	123	Polycystin-2; PC2, PKD2, calcium binding domain, E	99.22
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	99.21
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	99.21
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	99.21
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	99.2
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	99.2
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	99.2
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	99.2
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	99.19
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	99.19
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	99.19
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	99.19
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.18
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	99.18
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	99.18
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	99.18
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	99.17
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	99.16
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	99.16
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	99.16
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	99.15
1c07_A	95	Protein (epidermal growth factor receptor pathway	99.14
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	99.14
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	99.14
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	99.13
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	99.13
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	99.13
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	99.13
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	99.12
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	99.12
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	99.12
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	99.11

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=5.1e-77  Score=639.46  Aligned_cols=445  Identities=33%  Similarity=0.600  Sum_probs=392.2

Q ss_pred             CCCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCCh----------hcHHHHHHHHHHHHhCCCCCCee
Q 043828           76 EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE----------IDIDDVRREVEIMRHLPKHPNIV  145 (586)
Q Consensus        76 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~----------~~~~~~~~Ei~~l~~l~~hpnIv  145 (586)
                      .+.+.++|++++.||+|+||+||+|.+..+++.||+|++.+......          ...+.+.+|+.+++++ +||||+
T Consensus        31 ~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv  109 (504)
T 3q5i_A           31 EGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-DHPNII  109 (504)
T ss_dssp             CSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTC-CCTTBC
T ss_pred             CCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC-CCCCCC
Confidence            35677899999999999999999999999999999999986543321          3356789999999999 899999


Q ss_pred             EEEEEEEeCCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceE
Q 043828          146 TYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLK  225 (586)
Q Consensus       146 ~l~~~~~~~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vk  225 (586)
                      ++++++.+...+|+|||||+||+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+..+.....+|
T Consensus       110 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~k  189 (504)
T 3q5i_A          110 KLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIK  189 (504)
T ss_dssp             CEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred             eEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEE
Confidence            99999999999999999999999999998888999999999999999999999999999999999999996544445899


Q ss_pred             EeecccccccCCCCceecccCCccccchhhhhccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCC
Q 043828          226 AIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD  305 (586)
Q Consensus       226 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~  305 (586)
                      |+|||++............+||+.|+|||++.+.|+.++||||+||++|+|++|.+||.+.+..++...+..+.+.++.+
T Consensus       190 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~  269 (504)
T 3q5i_A          190 IVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFN  269 (504)
T ss_dssp             ECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHH
T ss_pred             EEECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcc
Confidence            99999998877666666778999999999999889999999999999999999999999999999999999998888877


Q ss_pred             CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCCCCCCcc---CCCccccchhhhhhhhhhhhhhhhhcccCC-
Q 043828          306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVS---LGGNVTSRIKQFSIMNKFKKKVLRVVADNL-  381 (586)
Q Consensus       306 ~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~l~~~~~~l-  381 (586)
                      .|+.+++.+++||.+||..||.+|||+.|+|+||||+.........   .......++++|....++++.++.++...+ 
T Consensus       270 ~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~a~l~~i~~~~~  349 (504)
T 3q5i_A          270 DWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLT  349 (504)
T ss_dssp             HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCCCCGGGHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHHTS
T ss_pred             ccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence            7888999999999999999999999999999999998654332211   112345667788888888888888888776 


Q ss_pred             chhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhc--------CCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhc
Q 043828          382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI--------GQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLK  453 (586)
Q Consensus       382 ~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~--------~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~  453 (586)
                      +++++++++++|..+|.|+||.|+.+||..++..+        |..++..+++.+|+.+|.|+||.|+|+||+.++....
T Consensus       350 ~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~  429 (504)
T 3q5i_A          350 TLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQ  429 (504)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHH
T ss_pred             cHHHHHHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhhh
Confidence            88999999999999999999999999999999887        5678889999999999999999999999999776655


Q ss_pred             cCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          454 RIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       454 ~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ....++.++.+|+.||+|++|+|+.+||..++...+  . ++++++++|..+|.|+||.|+|+||+.+|..
T Consensus       430 ~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~--~-~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~  497 (504)
T 3q5i_A          430 ILFSEERLRRAFNLFDTDKSGKITKEELANLFGLTS--I-SEKTWNDVLGEADQNKDNMIDFDEFVSMMHK  497 (504)
T ss_dssp             HHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTCSC--C-CHHHHHHHHHTTCSSCSSSEEHHHHHHHHHH
T ss_pred             cccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhhCC--C-CHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            556778999999999999999999999999987532  3 4889999999999999999999999999874

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=4e-77  Score=637.80  Aligned_cols=444  Identities=36%  Similarity=0.636  Sum_probs=394.1

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      ..+.++|++.+.||+|+||.||+|++..+|+.||+|++.+.........+.+.+|+.+++++ +||||+++++++.+.+.
T Consensus        22 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~  100 (484)
T 3nyv_A           22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-DHPNIMKLYEFFEDKGY  100 (484)
T ss_dssp             CCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSE
T ss_pred             CcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCE
Confidence            34567899999999999999999999999999999999877655555678899999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|+|||||.||+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+......+.+||+|||++....
T Consensus       101 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  180 (484)
T 3nyv_A          101 FYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE  180 (484)
T ss_dssp             EEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred             EEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence            99999999999999999988899999999999999999999999999999999999999755567899999999998877


Q ss_pred             CCCceecccCCccccchhhhhccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          237 PGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      ........+||+.|+|||++.+.|+.++|||||||++|+|++|.+||.+.+..++...+..+.+.++.+.|..+++.+++
T Consensus       181 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~  260 (484)
T 3nyv_A          181 ASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD  260 (484)
T ss_dssp             CCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHH
T ss_pred             cccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHH
Confidence            66666677899999999999989999999999999999999999999999999999999999998888888899999999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCccCCCCC---CCccCCCccccchhhhhhhhhhhhhhhhhcccCC-chhhHhHHHHh
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWIKNDNHA---PNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNL-PQDQMAQIKQM  392 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~l-~~~~~~~~~~~  392 (586)
                      ||.+||..||.+|||+.|+|+||||+.....   ............+++|...+++++.++.+++..+ ++++.++++++
T Consensus       261 li~~~L~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~qa~l~~i~~~~~~~~~~~~l~~~  340 (484)
T 3nyv_A          261 LIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAI  340 (484)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHTSHHHHHHTC-----CCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCChhHCcCHHHHhhChhhcccccccccccccchHHHHHHHHHHhhhhHHHHHHHHHHHhccCcHHHHHHHHHH
Confidence            9999999999999999999999999864321   1222223445677888889999999998888776 78899999999


Q ss_pred             hhhccCCCCCCcCHHHHHH----HHHhcCCCCC-------HHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHH
Q 043828          393 FYMMDTDKNGDLTFEELKD----GLNMIGQKVS-------DPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDIL  461 (586)
Q Consensus       393 F~~~D~~~~G~i~~~el~~----~l~~~~~~~~-------~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~  461 (586)
                      |..+|.|+||.|+.+||..    +++.+|..++       .++++.+|+.+|.|+||.|+|+||+.++........++.+
T Consensus       341 F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~  420 (484)
T 3nyv_A          341 FHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERL  420 (484)
T ss_dssp             HHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhccccCcHHHH
Confidence            9999999999999999954    4455577777       7899999999999999999999999977665555567789


Q ss_pred             HHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          462 SQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       462 ~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      +.+|+.||+|+||+|+.+||..+|..  ... ++++++++|..+|.|+||.|+|+||+.++..
T Consensus       421 ~~~F~~~D~d~dG~I~~~El~~~l~~--~~~-~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~  480 (484)
T 3nyv_A          421 ERAFRMFDSDNSGKISSTELATIFGV--SDV-DSETWKSVLSEVDKNNDGEVDFDEFQQMLLK  480 (484)
T ss_dssp             HHHHHHHCTTCCSEEEHHHHHHHHHH--TTC-CHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCcCCHHHHHHHHHh--cCC-CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHh
Confidence            99999999999999999999999986  233 4889999999999999999999999998864

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=4.8e-77  Score=638.11  Aligned_cols=444  Identities=35%  Similarity=0.610  Sum_probs=389.9

Q ss_pred             CCCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           76 EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        76 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      .+.+.++|++++.||+|+||+||+|++..++..||+|++.+...... ....+.+|+.+++.+ +||||+++++++.+..
T Consensus        32 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~-~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~  109 (494)
T 3lij_A           32 KGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTS-SNSKLLEEVAVLKLL-DHPNIMKLYDFFEDKR  109 (494)
T ss_dssp             BCCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----C-TTHHHHHHHHHHTTC-CCTTBCCEEEEEECSS
T ss_pred             CCchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCch-HHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCC
Confidence            34567789999999999999999999999999999999987653322 246788999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      .+|+|||||+||+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+......+.+||+|||++...
T Consensus       110 ~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~  189 (494)
T 3lij_A          110 NYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF  189 (494)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred             EEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeEC
Confidence            99999999999999999988889999999999999999999999999999999999999965455677999999999887


Q ss_pred             CCCCceecccCCccccchhhhhccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          236 KPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       236 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      .........+||+.|+|||++.+.|+.++||||+||++|+|++|.+||.+.+..++...+..+...++.+.|..+++.++
T Consensus       190 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~  269 (494)
T 3lij_A          190 ENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAK  269 (494)
T ss_dssp             BTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHH
T ss_pred             CCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHH
Confidence            76666667789999999999988899999999999999999999999999999999999999999988888889999999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcCCCccCCCC----CCCccCCCccccchhhhhhhhhhhhhhhhhcccCC-chhhHhHHH
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDNH----APNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNL-PQDQMAQIK  390 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~hp~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~l-~~~~~~~~~  390 (586)
                      +||.+||+.||.+|||+.++|+||||+....    ............++++|...+++++.++.+++..+ +++++++++
T Consensus       270 ~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~qa~l~~ia~~~~~~~~~~~l~  349 (494)
T 3lij_A          270 DLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELT  349 (494)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHTCHHHHHHHHHHHC---CCCCSSHHHHHHTTTTCCHHHHHHHHHHHHHSCCHHHHHHHH
T ss_pred             HHHHHHCCCChhhCccHHHHhcCcccccCcccccccccccccHHHHHHHHHHHHhHHHHHHHHHHHHHhcccHHHHHHHH
Confidence            9999999999999999999999999975311    12223345566788889888999999988888776 788999999


Q ss_pred             HhhhhccCCCCCCcCHHHHHHHHHhcCC--------CCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHH
Q 043828          391 QMFYMMDTDKNGDLTFEELKDGLNMIGQ--------KVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILS  462 (586)
Q Consensus       391 ~~F~~~D~~~~G~i~~~el~~~l~~~~~--------~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~  462 (586)
                      ++|..+|.|+||.|+.+||..++..++.        .++..+++.+|+.+|.|+||.|+|+||+.++.........+.++
T Consensus       350 ~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~~  429 (494)
T 3lij_A          350 DIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLE  429 (494)
T ss_dssp             HHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHHHHH
T ss_pred             HHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhccccHHHHH
Confidence            9999999999999999999999998854        45578899999999999999999999999876665566778899


Q ss_pred             HHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          463 QAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       463 ~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      .+|+.||+|++|+|+.+||..+|..  .. .++++++++|..+|.|+||.|+|+||+.++..
T Consensus       430 ~~F~~~D~d~~G~Is~~El~~~l~~--~~-~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~  488 (494)
T 3lij_A          430 SAFQKFDQDGNGKISVDELASVFGL--DH-LESKTWKEMISGIDSNNDGDVDFEEFCKMIQK  488 (494)
T ss_dssp             HHHHHHCTTCSSEECHHHHHHHC-C--CS-CCCHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred             HHHHHHCCCCCCcCCHHHHHHHHHh--cC-CCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence            9999999999999999999999875  23 33778999999999999999999999999863

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=1.9e-77  Score=640.19  Aligned_cols=445  Identities=34%  Similarity=0.636  Sum_probs=376.1

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      +.+.++|++++.||+|+||+||+|++..+|+.||+|++.+..... .....+.+|+.+++++ +||||+++++++.+...
T Consensus        18 g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~   95 (486)
T 3mwu_A           18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKL-DHPNIMKLFEILEDSSS   95 (486)
T ss_dssp             CHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC-SCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred             CChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccc-hHHHHHHHHHHHHHhC-CCCCcCeEEEEEEcCCE
Confidence            456689999999999999999999999999999999997654332 2457889999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|+|||||.||+|.+.+.....+++..++.++.||+.||.|||++||+||||||+|||+......+.+||+|||++....
T Consensus        96 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  175 (486)
T 3mwu_A           96 FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (486)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred             EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence            99999999999999999888899999999999999999999999999999999999999765566789999999998876


Q ss_pred             CCCceecccCCccccchhhhhccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          237 PGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      ........+||+.|+|||++.+.|+.++|||||||++|+|++|.+||.+.+..++...+..+.+.++.+.|..+++.+++
T Consensus       176 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~  255 (486)
T 3mwu_A          176 QNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD  255 (486)
T ss_dssp             CC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHH
T ss_pred             CCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHH
Confidence            66666677899999999999988999999999999999999999999999999999999999998888888899999999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCccCCCCCCC-c---cCCCccccchhhhhhhhhhhhhhhhhcccCC-chhhHhHHHH
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPN-V---SLGGNVTSRIKQFSIMNKFKKKVLRVVADNL-PQDQMAQIKQ  391 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~l-~~~~~~~~~~  391 (586)
                      ||.+||..||.+|||+.++|+||||+....... .   ........++++|....++++..+.+++..+ ..++++++++
T Consensus       256 li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~l~~~~~~~~l~~  335 (486)
T 3mwu_A          256 LIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTE  335 (486)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHCHHHHHTCCCCCCGGGHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHhcCHhhccCcccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence            999999999999999999999999986543221 1   1112334567888888888888888888776 7889999999


Q ss_pred             hhhhccCCCCCCcCHHHHHHHHH----hcCCCCC----------HHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCc
Q 043828          392 MFYMMDTDKNGDLTFEELKDGLN----MIGQKVS----------DPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGN  457 (586)
Q Consensus       392 ~F~~~D~~~~G~i~~~el~~~l~----~~~~~~~----------~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~  457 (586)
                      +|..+|.|+||.|+.+||..++.    .+|..++          .++++.+|+.+|.|+||.|+|+||+.++........
T Consensus       336 ~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~~~~~~  415 (486)
T 3mwu_A          336 IFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLS  415 (486)
T ss_dssp             HHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSCTTTTCC
T ss_pred             HHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHhhhccch
Confidence            99999999999999999966554    4466665          788999999999999999999999987766656667


Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      .+.++.+|+.||+|+||+|+.+||..++..+|...+ +++++.+|..+|.|+||.|+|+||+.++..
T Consensus       416 ~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~-~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~  481 (486)
T 3mwu_A          416 RERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQ-MEELESIIEQVDNNKDGEVDFNEFVEMLQN  481 (486)
T ss_dssp             HHHHHHHHHHHCSSCSSSBCSSCC---------------------CCCCSSCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCC-HHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            789999999999999999999999999999887766 788999999999999999999999998863

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=4e-64  Score=496.12  Aligned_cols=257  Identities=32%  Similarity=0.564  Sum_probs=236.0

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++++.||+|+||+||+|+++.+|+.||+|++.+.........+.+.+|+.+|++| +|||||+++++|++++.+|||
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~yiv  110 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFG  110 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEEEEE
Confidence            5799999999999999999999999999999999877654455568899999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC--
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG--  238 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~--  238 (586)
                      ||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.....  
T Consensus       111 mEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl---~~~g~vKl~DFGla~~~~~~~~  187 (311)
T 4aw0_A          111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESK  187 (311)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECCTTTT
T ss_pred             EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEE---cCCCCEEEEEcCCceecCCCCC
Confidence            9999999999999998999999999999999999999999999999999999999   67789999999999876533  


Q ss_pred             -CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          239 -EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       239 -~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                       ....+.+||+.|||||++.+ .|+.++|||||||++|+|++|.+||.+.+..++...|.++.+.++.    .+|+++++
T Consensus       188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~----~~s~~~~d  263 (311)
T 4aw0_A          188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPE----KFFPKARD  263 (311)
T ss_dssp             CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT----TCCHHHHH
T ss_pred             cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc----ccCHHHHH
Confidence             23456799999999999974 6999999999999999999999999999999999999998877653    58999999


Q ss_pred             HHHHccCCCCCCCCCHHH------HhcCCCccCCC
Q 043828          317 LVKNMLDPNPYNRLTLEE------VLENPWIKNDN  345 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~e------il~hp~~~~~~  345 (586)
                      ||.+||.+||.+|||++|      +++||||++..
T Consensus       264 li~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~id  298 (311)
T 4aw0_A          264 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVT  298 (311)
T ss_dssp             HHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred             HHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCC
Confidence            999999999999999988      58999998754

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=7.2e-64  Score=501.78  Aligned_cols=259  Identities=30%  Similarity=0.502  Sum_probs=231.8

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      +.....|+++++||+|+||+||+|+++.+|+.||||++.+.....   .+.+.+|+.+|+.| +|||||+++++|++++.
T Consensus        70 ~dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~---~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~  145 (346)
T 4fih_A           70 GDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR---RELLFNEVVIMRDY-QHENVVEMYNSYLVGDE  145 (346)
T ss_dssp             SCGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSS---GGGGHHHHHHHHHC-CCTTBCCEEEEEEETTE
T ss_pred             CChhHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhH---HHHHHHHHHHHHhC-CCCCCCcEEEEEEECCE
Confidence            344578999999999999999999999999999999998664332   35688999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|||||||+||+|.+++.+ +.+++..++.++.||+.||.|||++|||||||||+|||+   +.++.+||+|||+|+...
T Consensus       146 ~~ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~  221 (346)
T 4fih_A          146 LWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVS  221 (346)
T ss_dssp             EEEEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECC
T ss_pred             EEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEE---CCCCCEEEecCcCceecC
Confidence            9999999999999998876 579999999999999999999999999999999999999   677899999999998765


Q ss_pred             CC-CceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          237 PG-EQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       237 ~~-~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      .. ....+.+||+.|||||++. ..|+.++|||||||++|+|++|.+||.+.+..++...+..... .....+..+|+++
T Consensus       222 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~  300 (346)
T 4fih_A          222 KEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRLKNLHKVSPSL  300 (346)
T ss_dssp             SSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC-CCCSCGGGSCHHH
T ss_pred             CCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCCCccccCCHHH
Confidence            43 3456789999999999997 4699999999999999999999999999999888888776532 3334456799999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ++||.+||.+||++|||++|+|+||||++.
T Consensus       301 ~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~  330 (346)
T 4fih_A          301 KGFLDRLLVRDPAQRATAAELLKHPFLAKA  330 (346)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             HHHHHHHcCCChhHCcCHHHHhcCHhhcCC
Confidence            999999999999999999999999999864

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=5.8e-63  Score=481.43  Aligned_cols=258  Identities=38%  Similarity=0.652  Sum_probs=216.5

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ...++|++++.||+|+||+||+|++..+|+.||+|++.+...........+.+|+.+|++| +|||||++++++++++.+
T Consensus        10 ~~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~   88 (275)
T 3hyh_A           10 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-RHPHIIKLYDVIKSKDEI   88 (275)
T ss_dssp             ----CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred             CEeeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEE
Confidence            3457899999999999999999999999999999999887666555667899999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      ||||||| +|+|.+++..++++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+....
T Consensus        89 ~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl---~~~~~vkl~DFGla~~~~~  164 (275)
T 3hyh_A           89 IMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLNVKIADFGLSNIMTD  164 (275)
T ss_dssp             EEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE---CTTCCEEECCSSCC-----
T ss_pred             EEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEE---CCCCCEEEeecCCCeecCC
Confidence            9999999 67999999999999999999999999999999999999999999999999   6778999999999988766


Q ss_pred             CCceecccCCccccchhhhhc-cC-CCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLRR-NY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~~-~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      .....+.+||+.|||||++.+ .| +.++||||+||++|+|++|.+||.+.+...+...+..+.+.++    ..+|++++
T Consensus       165 ~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~  240 (275)
T 3hyh_A          165 GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP----KFLSPGAA  240 (275)
T ss_dssp             ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC----TTSCHHHH
T ss_pred             CCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHH
Confidence            666667899999999999975 44 6799999999999999999999999999999999998877654    35899999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +||.+||++||++|||++|+|+||||+..
T Consensus       241 ~li~~~L~~dP~~R~s~~eil~hpw~k~~  269 (275)
T 3hyh_A          241 GLIKRMLIVNPLNRISIHEIMQDDWFKVD  269 (275)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred             HHHHHHccCChhHCcCHHHHHcCcccccC
Confidence            99999999999999999999999999853

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.9e-61  Score=496.01  Aligned_cols=259  Identities=30%  Similarity=0.502  Sum_probs=232.0

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      +...+.|+++++||+|+||+||+|+++.+|+.||||++......   ..+.+.+|+.+|+.| +|||||+++++|++++.
T Consensus       147 ~dp~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l-~HpnIV~l~~~~~~~~~  222 (423)
T 4fie_A          147 GDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDY-QHENVVEMYNSYLVGDE  222 (423)
T ss_dssp             SCGGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS---SGGGHHHHHHHHHHC-CCTTBCCEEEEEEETTE
T ss_pred             CChhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh---HHHHHHHHHHHHHhC-CCCCCCceEEEEEECCE
Confidence            34457899999999999999999999999999999999765433   235688999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|||||||+||+|.+++.. +.+++..++.|+.||+.||.|||++|||||||||+|||+   +.++.+||+|||+|....
T Consensus       223 ~~iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl---~~~g~vKl~DFGla~~~~  298 (423)
T 4fie_A          223 LWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---THDGRVKLSDFGFCAQVS  298 (423)
T ss_dssp             EEEEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEE---CTTCCEEECCCTTCEECC
T ss_pred             EEEEEeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE---cCCCCEEEecCccceECC
Confidence            9999999999999998865 569999999999999999999999999999999999999   677899999999998765


Q ss_pred             CC-CceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          237 PG-EQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       237 ~~-~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      .. ......+||+.|||||++. ..|+.++|||||||++|+|++|.+||.+.+..+....+..... .....+..+|+++
T Consensus       299 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~~~~~~~~~s~~~  377 (423)
T 4fie_A          299 KEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP-PRLKNLHKVSPSL  377 (423)
T ss_dssp             SSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-CCCSCTTSSCHHH
T ss_pred             CCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-CCCcccccCCHHH
Confidence            43 3456789999999999997 4699999999999999999999999999999888888776543 3334557899999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ++||.+||.+||.+|||+.|+|+||||++.
T Consensus       378 ~dli~~~L~~dP~~R~ta~ell~Hp~~~~~  407 (423)
T 4fie_A          378 KGFLDRLLVRDPAQRATAAELLKHPFLAKA  407 (423)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             HHHHHHHcCCChhHCcCHHHHhcCHHhcCC
Confidence            999999999999999999999999999864

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=8.9e-62  Score=487.38  Aligned_cols=256  Identities=29%  Similarity=0.563  Sum_probs=225.5

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +++|++++.||+|+||+||+|+++.+|+.||||++.+.... ....+.+.+|+.+|++| +|||||+++++|++++.+||
T Consensus        23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~yi  100 (350)
T 4b9d_A           23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS-SKEREESRREVAVLANM-KHPNIVQYRESFEENGSLYI  100 (350)
T ss_dssp             CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC-HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEE
T ss_pred             ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC-HHHHHHHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEE
Confidence            57999999999999999999999999999999999876543 34467899999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          160 VMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |||||+||+|.+++...  ..+++..++.|+.||+.||.|||++|||||||||+|||+   +.++.+||+|||+|+....
T Consensus       101 VmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~  177 (350)
T 4b9d_A          101 VMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL---TKDGTVQLGDFGIARVLNS  177 (350)
T ss_dssp             EEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEE---CTTCCEEECSTTEESCCCH
T ss_pred             EEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE---CCCCCEEEcccccceeecC
Confidence            99999999999999754  357999999999999999999999999999999999999   6778999999999987653


Q ss_pred             CC-ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          238 GE-QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       238 ~~-~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      .. .....+||+.|||||++.+ .|+.++|||||||++|+|++|.+||.+.+..++...+..+.+..   .+..+|++++
T Consensus       178 ~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~---~~~~~s~~~~  254 (350)
T 4b9d_A          178 TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPP---VSLHYSYDLR  254 (350)
T ss_dssp             HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC---CCTTSCHHHH
T ss_pred             CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCC---CCccCCHHHH
Confidence            32 2345789999999999974 69999999999999999999999999999999999998886532   3457899999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      +||.+||++||.+|||++|+|+||||+.
T Consensus       255 ~li~~~L~~dP~~R~s~~e~l~hp~~~~  282 (350)
T 4b9d_A          255 SLVSQLFKRNPRDRPSVNSILEKGFIAK  282 (350)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHTSHHHHT
T ss_pred             HHHHHHccCChhHCcCHHHHhcCHHhhc
Confidence            9999999999999999999999999975

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=2.2e-60  Score=467.42  Aligned_cols=255  Identities=24%  Similarity=0.416  Sum_probs=220.6

Q ss_pred             Ce-eecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe----CCe
Q 043828           82 KY-TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED----KDA  156 (586)
Q Consensus        82 ~y-~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~----~~~  156 (586)
                      +| ++.++||+|+||+||+|++..++..||+|++...... ....+.+.+|+.+|++| +|||||+++++|++    +..
T Consensus        26 r~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~~~  103 (290)
T 3fpq_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKC  103 (290)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEEETTEEE
T ss_pred             ceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC-HHHHHHHHHHHHHHHhC-CCCCCCcEEEEEeeccCCCcE
Confidence            44 7888999999999999999999999999999876543 33457899999999999 89999999999975    356


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG--VMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      +|||||||+||+|.+++...+.+++..+..++.||+.||.|||+++  ||||||||+|||++  ..++.+||+|||+|+.
T Consensus       104 ~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~--~~~g~vKl~DFGla~~  181 (290)
T 3fpq_A          104 IVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLATL  181 (290)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEES--STTSCEEECCTTGGGG
T ss_pred             EEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEE--CCCCCEEEEeCcCCEe
Confidence            8999999999999999999889999999999999999999999998  99999999999994  2467999999999986


Q ss_pred             cCCCCceecccCCccccchhhhhccCCCcchHHHHHHHHHHHhhCCCCCCCCC-HHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          235 FKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAET-EEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       235 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      .. .....+.+|||.|||||++.+.|+.++|||||||++|+|+||.+||.+.. ...+...+..+..+  ......++++
T Consensus       182 ~~-~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~  258 (290)
T 3fpq_A          182 KR-ASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--ASFDKVAIPE  258 (290)
T ss_dssp             CC-TTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC--GGGGGCCCHH
T ss_pred             CC-CCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCC--CCCCccCCHH
Confidence            54 33455679999999999999889999999999999999999999997654 44455555444322  2223457899


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      +++||.+||.+||.+|||++|+|+||||+.
T Consensus       259 ~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          259 VKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence            999999999999999999999999999985

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=8.8e-61  Score=472.43  Aligned_cols=255  Identities=30%  Similarity=0.516  Sum_probs=222.9

Q ss_pred             cCeeecceeccCCceEEEEEEEc---cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~---~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ++|++++.||+|+||+||+|++.   .+++.||+|++.+...... ....+.+|+.+|++| +|||||+++++|++++.+
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~  101 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-DRVRTKMERDILVEV-NHPFIVKLHYAFQTEGKL  101 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE-ECC------CCCCCC-CCTTEECEEEEEEETTEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH-HHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEE
Confidence            58999999999999999999874   4678999999987654322 224678899999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |||||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+....
T Consensus       102 ~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~vKl~DFGla~~~~~  178 (304)
T 3ubd_A          102 YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESID  178 (304)
T ss_dssp             EEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CTTSCEEEESSEEEEC---
T ss_pred             EEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEE---cCCCCEEecccccceeccC
Confidence            9999999999999999998999999999999999999999999999999999999999   6778999999999986543


Q ss_pred             -CCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          238 -GEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       238 -~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                       .....+.+||+.|||||++. ..|+.++|||||||++|+|++|.+||.+.+..++...+.++.+.++    ..+|++++
T Consensus       179 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~  254 (304)
T 3ubd_A          179 HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP----QFLSPEAQ  254 (304)
T ss_dssp             --CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHH
T ss_pred             CCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC----CcCCHHHH
Confidence             33445678999999999997 4699999999999999999999999999999999999998877654    35899999


Q ss_pred             HHHHHccCCCCCCCCC-----HHHHhcCCCccCC
Q 043828          316 ELVKNMLDPNPYNRLT-----LEEVLENPWIKND  344 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps-----~~eil~hp~~~~~  344 (586)
                      +||.+||++||++|||     ++|+++||||+..
T Consensus       255 ~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i  288 (304)
T 3ubd_A          255 SLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI  288 (304)
T ss_dssp             HHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence            9999999999999998     5899999999864

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=5.8e-59  Score=464.91  Aligned_cols=252  Identities=25%  Similarity=0.361  Sum_probs=221.6

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .+.|++.++||+|+||+||+|+++.+|+.||||++..+...        .+|+.+|+.| +|||||+++++|++++.+||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~--------~~E~~il~~l-~HpnIV~l~~~~~~~~~~~i  127 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR--------VEELVACAGL-SSPRIVPLYGAVREGPWVNI  127 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--------THHHHTTTTC-CCTTBCCEEEEEEETTEEEE
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhH--------HHHHHHHHhC-CCCCCCcEEEEEEECCEEEE
Confidence            45799999999999999999999999999999999765432        4699999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCC-ceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENS-QLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~-~vkl~Dfg~a~~~~~~  238 (586)
                      |||||+||+|.+++...+.+++..+..++.||+.||.|||++|||||||||+|||+   +.++ .+||+|||+|+.....
T Consensus       128 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---~~~g~~vKl~DFGla~~~~~~  204 (336)
T 4g3f_A          128 FMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL---SSDGSRAALCDFGHALCLQPD  204 (336)
T ss_dssp             EECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEE---CTTSCCEEECCCTTCEEC---
T ss_pred             EEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE---eCCCCEEEEeeCCCCeEccCC
Confidence            99999999999999998899999999999999999999999999999999999999   4455 6999999999876543


Q ss_pred             Cc------eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCC
Q 043828          239 EQ------FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS  311 (586)
Q Consensus       239 ~~------~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  311 (586)
                      ..      ....+||+.|||||++.+ .|+.++|||||||++|+|++|.+||.+.+...+...+......+. ..++.++
T Consensus       205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~s  283 (336)
T 4g3f_A          205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIR-EIPPSCA  283 (336)
T ss_dssp             ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGG-GSCTTSC
T ss_pred             CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCch-hcCccCC
Confidence            21      223689999999999974 699999999999999999999999998877777778877765433 2346799


Q ss_pred             HHHHHHHHHccCCCCCCCCCHHHH-------------hcCCCccCC
Q 043828          312 KEAKELVKNMLDPNPYNRLTLEEV-------------LENPWIKND  344 (586)
Q Consensus       312 ~~~~~li~~~L~~dp~~Rps~~ei-------------l~hp~~~~~  344 (586)
                      +.+++||.+||.+||.+|||+.|+             |+|||+...
T Consensus       284 ~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~  329 (336)
T 4g3f_A          284 PLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEY  329 (336)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSC
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCC
Confidence            999999999999999999999998             579999764

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.1e-58  Score=471.95  Aligned_cols=261  Identities=28%  Similarity=0.410  Sum_probs=225.3

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe----
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED----  153 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~----  153 (586)
                      .+.++|++++.||+|+||+||+|++..+|+.||||++.+... .......+.+|+.+|+.| +|||||++++++..    
T Consensus        51 ~i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~  128 (398)
T 4b99_A           51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD-VVTNAKRTLRELKILKHF-KHDNIIAIKDILRPTVPY  128 (398)
T ss_dssp             CCCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS-SHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSSCT
T ss_pred             CCCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc-chHHHHHHHHHHHHHHhc-CCCCcceEeeeeeccccc
Confidence            345789999999999999999999999999999999976532 233456788999999999 89999999999764    


Q ss_pred             --CCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          154 --KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       154 --~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                        .+.+|||||||+ |+|.+++...+.+++..++.+++||+.||.|||++|||||||||+|||+   +.++.+||+|||+
T Consensus       129 ~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~---~~~~~~Ki~DFGl  204 (398)
T 4b99_A          129 GEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGM  204 (398)
T ss_dssp             TTCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTCCEEECCCTT
T ss_pred             ccCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCcccccc---CCCCCEEEeecce
Confidence              367999999995 6899999988999999999999999999999999999999999999999   6788999999999


Q ss_pred             ccccCC-----CCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCC
Q 043828          232 SIFFKP-----GEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER  304 (586)
Q Consensus       232 a~~~~~-----~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~  304 (586)
                      |+....     .....+.+||+.|||||++.+  .|+.++||||+||++|+|++|.+||.+.+..+.+..|......++.
T Consensus       205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~  284 (398)
T 4b99_A          205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP  284 (398)
T ss_dssp             CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCG
T ss_pred             eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence            986532     223456799999999999864  5799999999999999999999999999998888887654332221


Q ss_pred             C---------------------------CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          305 D---------------------------PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       305 ~---------------------------~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .                           .++.+++++++||.+||..||.+|||+.|+|+||||+..
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  351 (398)
T 4b99_A          285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY  351 (398)
T ss_dssp             GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTT
T ss_pred             HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcC
Confidence            1                           124578999999999999999999999999999999864

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=3.9e-56  Score=480.29  Aligned_cols=264  Identities=32%  Similarity=0.652  Sum_probs=243.0

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      ..++++|++++.||+|+||+||+|+++.+|+.||+|++.+..   ....+.+.+|+.+|+.| +|||||+++++|++.+.
T Consensus       153 ~~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~---~~~~~~~~~Ei~il~~l-~hpnIv~l~~~~~~~~~  228 (573)
T 3uto_A          153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNE  228 (573)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHHHT-CCTTBCCEEEEEECSSE
T ss_pred             CcCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc---hhhHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCE
Confidence            456789999999999999999999999999999999997643   33456789999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      +|||||||+||+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++. +..+.+||+|||+|+.+
T Consensus       229 ~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~-~~~~~vKl~DFG~a~~~  307 (573)
T 3uto_A          229 MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT-KRSNELKLIDFGLTAHL  307 (573)
T ss_dssp             EEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-SSCCCEEECCCSSCEEC
T ss_pred             EEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccC-CCCCCEEEeeccceeEc
Confidence            9999999999999999864 467999999999999999999999999999999999999953 24578999999999998


Q ss_pred             CCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          236 KPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       236 ~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      .+.......+||+.|||||++.+ .|+.++|||||||++|+|++|.+||.+.+..++...+....+.++...|+.+|+++
T Consensus       308 ~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  387 (573)
T 3uto_A          308 DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDG  387 (573)
T ss_dssp             CTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHH
T ss_pred             cCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHH
Confidence            87777778899999999999974 68999999999999999999999999999999999999999888888888999999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      ++||.+||..||.+|||+.|+|+||||+...
T Consensus       388 ~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~  418 (573)
T 3uto_A          388 KDFIRKLLLADPNTRMTIHQALEHPWLTPGN  418 (573)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHSTTTSCCC
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCcCcCCCC
Confidence            9999999999999999999999999998643

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.1e-55  Score=449.96  Aligned_cols=257  Identities=26%  Similarity=0.434  Sum_probs=211.0

Q ss_pred             CcccCeeecceeccCCceEEEEEEEc---cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      .+.++|++++.||+|+||+||+|+++   .+++.||+|++.+..     ....+.+|+.+|+.+.+|||||+++++|++.
T Consensus        18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~   92 (361)
T 4f9c_A           18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKN   92 (361)
T ss_dssp             GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEET
T ss_pred             CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEEEEEC
Confidence            35578999999999999999999875   457899999986542     2356889999999997899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          155 DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      +++|||||||+||+|.+++   +.+++..++.++.||+.||.|||++||+||||||+|||++  ...+.+||+|||+|+.
T Consensus        93 ~~~~lvmE~~~g~~L~~~~---~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~--~~~~~~kl~DFGla~~  167 (361)
T 4f9c_A           93 DHVVIAMPYLEHESFLDIL---NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYN--RRLKKYALVDFGLAQG  167 (361)
T ss_dssp             TEEEEEEECCCCCCHHHHH---TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEEEECCCTTCEE
T ss_pred             CEEEEEEeCCCcccHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEe--CCCCeEEECcCCCCcc
Confidence            9999999999999999988   3599999999999999999999999999999999999995  2347899999999975


Q ss_pred             cCCC-----------------------------CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCC
Q 043828          235 FKPG-----------------------------EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPF  283 (586)
Q Consensus       235 ~~~~-----------------------------~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf  283 (586)
                      ....                             ......+||+.|+|||++.+  .|+.++||||+||++|+|++|++||
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf  247 (361)
T 4f9c_A          168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF  247 (361)
T ss_dssp             CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred             cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence            4321                             12234689999999999864  4899999999999999999999999


Q ss_pred             CCC-CHHHHHHHHHhC--------------------------------------c------------cCCCCCCCCCCCH
Q 043828          284 WAE-TEEGIAHAIIRG--------------------------------------K------------IDFERDPWPKVSK  312 (586)
Q Consensus       284 ~~~-~~~~~~~~i~~~--------------------------------------~------------~~~~~~~~~~~~~  312 (586)
                      ... +....+..|...                                      .            .......|..+|+
T Consensus       248 ~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~  327 (361)
T 4f9c_A          248 YKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPD  327 (361)
T ss_dssp             SCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCH
T ss_pred             CCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCH
Confidence            654 333333333210                                      0            0011234667899


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +++|||.+||..||.+|||++|+|+||||++.
T Consensus       328 ~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i  359 (361)
T 4f9c_A          328 EAYDLLDKLLDLNPASRITAEEALLHPFFKDM  359 (361)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence            99999999999999999999999999999864

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.7e-56  Score=443.78  Aligned_cols=254  Identities=29%  Similarity=0.489  Sum_probs=202.3

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC---
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD---  155 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~---  155 (586)
                      +.++|++++.||+|+||+||+|+++.+|+.||||++....  .....+.+.+|+.+|++| +|||||+++++|.+.+   
T Consensus         3 ~l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l-~HpnIV~~~~~~~~~~~~~   79 (299)
T 4g31_A            3 YLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKL-EHPGIVRYFNAWLEKNTTE   79 (299)
T ss_dssp             HHHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEEC---
T ss_pred             cchhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEecCccc
Confidence            4568999999999999999999999999999999997553  334456789999999999 8999999999997544   


Q ss_pred             ---------eEEEEEeccCCCChHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCc
Q 043828          156 ---------AIYLVMELCEGGELFDRIVNKGH---YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQ  223 (586)
Q Consensus       156 ---------~~~iv~E~~~gg~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~  223 (586)
                               .+|||||||+||+|.+++.....   ..+..+..++.||+.||.|||++||+||||||+|||+   +.++.
T Consensus        80 ~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl---~~~~~  156 (299)
T 4g31_A           80 KLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDV  156 (299)
T ss_dssp             -------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCC
T ss_pred             cccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEE---CCCCc
Confidence                     37999999999999999987654   3456788999999999999999999999999999999   56789


Q ss_pred             eEEeecccccccCCCC-------------ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHH
Q 043828          224 LKAIDFGLSIFFKPGE-------------QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEE  289 (586)
Q Consensus       224 vkl~Dfg~a~~~~~~~-------------~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  289 (586)
                      +||+|||+|+......             .....+||+.|||||++.+ .|+.++|||||||++|+|++   ||......
T Consensus       157 vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~  233 (299)
T 4g31_A          157 VKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER  233 (299)
T ss_dssp             EEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH
T ss_pred             EEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH
Confidence            9999999998764322             1234689999999999974 69999999999999999996   88653322


Q ss_pred             -HHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          290 -GIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       290 -~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                       .....+.....  + +.++..++.+.+||.+||++||.+|||+.|+|+||||+..
T Consensus       234 ~~~~~~~~~~~~--p-~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~  286 (299)
T 4g31_A          234 VRTLTDVRNLKF--P-PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL  286 (299)
T ss_dssp             HHHHHHHHTTCC--C-HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred             HHHHHHHhcCCC--C-CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence             22333333322  1 1233456788999999999999999999999999999864

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.8e-55  Score=471.29  Aligned_cols=258  Identities=27%  Similarity=0.466  Sum_probs=224.6

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHH---HHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE---VEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E---i~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      .+++|++++.||+|+||+||+|+++.+|+.||+|++.+...........+.+|   +.+++.+ +|||||+++++|++.+
T Consensus       187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~-~HP~IV~l~~~f~~~~  265 (689)
T 3v5w_A          187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPD  265 (689)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECSS
T ss_pred             chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhC-CCCCEeEEEEEEEECC
Confidence            45789999999999999999999999999999999987654333333344444   5666667 8999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      .+|||||||+||+|.+++...+.+++..++.|+.||+.||.|||++|||||||||+|||+   +.++++||+|||+|+..
T Consensus       266 ~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILl---d~~G~vKL~DFGlA~~~  342 (689)
T 3v5w_A          266 KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDF  342 (689)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE---CTTSCEEECCCTTCEEC
T ss_pred             EEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEE---eCCCCEEecccceeeec
Confidence            999999999999999999998999999999999999999999999999999999999999   67899999999999876


Q ss_pred             CCCCceecccCCccccchhhhh-c-cCCCcchHHHHHHHHHHHhhCCCCCCCC---CHHHHHHHHHhCccCCCCCCCCCC
Q 043828          236 KPGEQFCEIVGSPYYMAPEVLR-R-NYGPEIDVWSAGVIIYILLCGVPPFWAE---TEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       236 ~~~~~~~~~~gt~~y~aPE~l~-~-~~~~~~DiwslG~il~~ll~g~~pf~~~---~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      ... ...+.+||+.|||||++. + .|+.++|||||||++|+|++|.+||.+.   ....+...+....+.++    ..+
T Consensus       343 ~~~-~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p----~~~  417 (689)
T 3v5w_A          343 SKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSF  417 (689)
T ss_dssp             SSC-CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCC----TTS
T ss_pred             CCC-CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCC----ccC
Confidence            543 345679999999999995 3 6999999999999999999999999763   34455666666665543    468


Q ss_pred             CHHHHHHHHHccCCCCCCCCC-----HHHHhcCCCccCCC
Q 043828          311 SKEAKELVKNMLDPNPYNRLT-----LEEVLENPWIKNDN  345 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps-----~~eil~hp~~~~~~  345 (586)
                      |+++++||.+||.+||.+|++     ++||++||||++..
T Consensus       418 S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~id  457 (689)
T 3v5w_A          418 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD  457 (689)
T ss_dssp             CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCC
T ss_pred             CHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCC
Confidence            999999999999999999998     79999999999754

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=9.2e-55  Score=430.64  Aligned_cols=251  Identities=23%  Similarity=0.368  Sum_probs=216.3

Q ss_pred             cCeeecceeccCCceEEEEEEEc-----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           81 DKYTFGKELGRGEFGITHQCFEI-----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      ++|.+.+.||+|+||+||+|++.     .++..||||++...   .....+.+.+|+.+|++| +|||||++++++.+++
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~   88 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGD   88 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSS
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeCC
Confidence            58999999999999999999864     46789999999653   233457899999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhC-------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCC
Q 043828          156 AIYLVMELCEGGELFDRIVNK-------------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENS  222 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~-------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~  222 (586)
                      .+|||||||++|+|.+++...             ..+++..+..++.||+.||.|||+++||||||||+|||+   +.++
T Consensus        89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl---~~~~  165 (299)
T 4asz_A           89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV---GENL  165 (299)
T ss_dssp             SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGG
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEE---CCCC
Confidence            999999999999999999764             369999999999999999999999999999999999999   6678


Q ss_pred             ceEEeecccccccCCCCce---ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHh
Q 043828          223 QLKAIDFGLSIFFKPGEQF---CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIR  297 (586)
Q Consensus       223 ~vkl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~  297 (586)
                      .+||+|||+|+........   ....||+.|||||++. +.|+.++|||||||++|||+| |+.||.+.+..++...+..
T Consensus       166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~  245 (299)
T 4asz_A          166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ  245 (299)
T ss_dssp             CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHH
T ss_pred             cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            9999999999876443322   2346899999999996 579999999999999999998 8999999999999998888


Q ss_pred             CccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          298 GKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      +....   ..+.+|+++.+||.+||+.||++|||+.+++  +|+++
T Consensus       246 ~~~~~---~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~--~~L~~  286 (299)
T 4asz_A          246 GRVLQ---RPRTCPQEVYELMLGCWQREPHMRKNIKGIH--TLLQN  286 (299)
T ss_dssp             TCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH--HHHHH
T ss_pred             CCCCC---CCccchHHHHHHHHHHcCCChhHCcCHHHHH--HHHHH
Confidence            76422   2246899999999999999999999999994  46653

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=3.4e-54  Score=432.51  Aligned_cols=248  Identities=22%  Similarity=0.319  Sum_probs=209.5

Q ss_pred             cCeeecceeccCCceEEEEEEEc-----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           81 DKYTFGKELGRGEFGITHQCFEI-----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      ++|.+.++||+|+||+||+|++.     .+++.||||++...   .....+.+.+|+.+|++| +|||||++++++.+.+
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l-~HpnIV~l~g~~~~~~  116 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTML-QHQHIVRFFGVCTEGR  116 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSS
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECC
Confidence            57999999999999999999864     46889999999643   334457899999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhC---------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCC
Q 043828          156 AIYLVMELCEGGELFDRIVNK---------------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSE  220 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~---------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~  220 (586)
                      .+|||||||++|+|.+++...               +++++..+..|+.||+.||.|||+++||||||||+|||+   +.
T Consensus       117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl---~~  193 (329)
T 4aoj_A          117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLV---GQ  193 (329)
T ss_dssp             SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---ET
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEE---CC
Confidence            999999999999999998753               358999999999999999999999999999999999999   56


Q ss_pred             CCceEEeecccccccCCCC---ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHH
Q 043828          221 NSQLKAIDFGLSIFFKPGE---QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAI  295 (586)
Q Consensus       221 ~~~vkl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i  295 (586)
                      ++.+||+|||+|+......   .....+||+.|||||++. ..|+.++|||||||+||||+| |+.||.+.+..++...+
T Consensus       194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i  273 (329)
T 4aoj_A          194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCI  273 (329)
T ss_dssp             TTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHH
T ss_pred             CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            7899999999998764332   223567999999999987 469999999999999999999 89999999999888888


Q ss_pred             HhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          296 IRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ..+... +  ..+.+++++.+||.+||+.||++|||+.||+++
T Consensus       274 ~~g~~~-~--~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          274 TQGREL-E--RPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             HHTCCC-C--CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             HcCCCC-C--CcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            876421 1  224689999999999999999999999999874

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2.5e-54  Score=427.44  Aligned_cols=250  Identities=22%  Similarity=0.360  Sum_probs=204.9

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++++++++||+|+||+||+|++   ...||||+++.... .....+.+.+|+.+|++| +|||||++++++. ++.+||
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~---~~~vAvK~~~~~~~-~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~-~~~~~i  108 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKW---HGDVAVKILKVVDP-TPEQFQAFRNEVAVLRKT-RHVNILLFMGYMT-KDNLAI  108 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEES---SSEEEEEECCCSSC-CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEE---CCcEEEEEEEecCC-CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEE-CCeEEE
Confidence            46889999999999999999974   23699999865432 344567899999999999 8999999999875 467899


Q ss_pred             EEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      |||||+||+|.+++.. ...+++..+..|+.||+.||.|||+++||||||||+|||+   +.++.+||+|||+|+.....
T Consensus       109 VmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl---~~~~~~Ki~DFGla~~~~~~  185 (307)
T 3omv_A          109 VTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFL---HEGLTVKIGDFGLATVKSRW  185 (307)
T ss_dssp             EEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEE---ETTEEEEECCCSSCBC----
T ss_pred             EEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEE---CCCCcEEEeeccCceecccC
Confidence            9999999999999976 4579999999999999999999999999999999999999   56789999999999875432


Q ss_pred             ---CceecccCCccccchhhhhc----cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCC--CCCCCC
Q 043828          239 ---EQFCEIVGSPYYMAPEVLRR----NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE--RDPWPK  309 (586)
Q Consensus       239 ---~~~~~~~gt~~y~aPE~l~~----~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~  309 (586)
                         ......+||+.|||||++.+    .|+.++|||||||+||||+||..||.+.+.......+.......+  ...++.
T Consensus       186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~  265 (307)
T 3omv_A          186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKN  265 (307)
T ss_dssp             --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTT
T ss_pred             CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCccccccc
Confidence               23445789999999999853    488999999999999999999999988665544444443333222  223457


Q ss_pred             CCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          310 VSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +++.+.+||.+||+.||++|||+.|++++
T Consensus       266 ~~~~l~~li~~cl~~dP~~RPs~~ei~~~  294 (307)
T 3omv_A          266 CPKAMKRLVADCVKKVKEERPLFPQILSS  294 (307)
T ss_dssp             SCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred             chHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            89999999999999999999999987643

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=6.6e-54  Score=426.34  Aligned_cols=250  Identities=19%  Similarity=0.308  Sum_probs=216.2

Q ss_pred             ccCeeecceeccCCceEEEEEEEc-----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEI-----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      ..++++.++||+|+||+||+|+..     .+++.||||++....  .....+.+.+|+.+|++| +|||||++++++.++
T Consensus        25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l-~HpNIV~l~g~~~~~  101 (308)
T 4gt4_A           25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARL-QHPNVVCLLGVVTKD  101 (308)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHC-CCTTBCCEEEEECSS
T ss_pred             HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhC-CCCCCCCcceEEEEC
Confidence            357899999999999999999853     467899999986543  233457899999999999 899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecC
Q 043828          155 DAIYLVMELCEGGELFDRIVNK----------------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADG  218 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~  218 (586)
                      +.+|||||||++|+|.++|...                ..+++..+..++.||+.||.|||+++||||||||+|||+   
T Consensus       102 ~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl---  178 (308)
T 4gt4_A          102 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV---  178 (308)
T ss_dssp             SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---
T ss_pred             CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEE---
Confidence            9999999999999999999653                358999999999999999999999999999999999999   


Q ss_pred             CCCCceEEeecccccccCCCC---ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHH
Q 043828          219 SENSQLKAIDFGLSIFFKPGE---QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAH  293 (586)
Q Consensus       219 ~~~~~vkl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~  293 (586)
                      +.++.+||+|||+|+......   .....+||+.|||||++. +.|+.++|||||||+||||+| |..||.+.+..++..
T Consensus       179 ~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~  258 (308)
T 4gt4_A          179 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVE  258 (308)
T ss_dssp             CGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHH
T ss_pred             CCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            677899999999998654322   234568999999999986 579999999999999999998 899999999999988


Q ss_pred             HHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          294 AIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       294 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .+..+....   ..+.+++.+.+||.+||+.||.+|||+.||+++
T Consensus       259 ~i~~~~~~~---~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          259 MIRNRQVLP---CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             HHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCCCC---CcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            888765422   224689999999999999999999999999875

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=1.1e-53  Score=448.52  Aligned_cols=299  Identities=37%  Similarity=0.714  Sum_probs=262.1

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .+.++|++++.||+|+||+||+|.+..+|+.||+|++...... ....+.+.+|+.+++.+ +||||+++++++.+.+.+
T Consensus         8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~-~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~~~~~   85 (444)
T 3soa_A            8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS-ARDHQKLEREARICRLL-KHPNIVRLHDSISEEGHH   85 (444)
T ss_dssp             HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH-HHHHHHHHHHHHHHHHC-CBTTBCCEEEEEECSSEE
T ss_pred             cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhC-CCcCCCeEEEEEEECCEE
Confidence            4567899999999999999999999999999999999876533 23456789999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |+|||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.....+.+||+|||++.....
T Consensus        86 ~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~  165 (444)
T 3soa_A           86 YLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG  165 (444)
T ss_dssp             EEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred             EEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence            99999999999999999988999999999999999999999999999999999999997544678899999999987654


Q ss_pred             CC-ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          238 GE-QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       238 ~~-~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      .. .....+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+.......+..+...++.+.|+.+++.++
T Consensus       166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~  245 (444)
T 3soa_A          166 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK  245 (444)
T ss_dssp             TCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHH
T ss_pred             CCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHH
Confidence            33 3356789999999999975 689999999999999999999999999999999999999999999988999999999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcCCCccCCCCCCCccCCCccccchhhhhhhhhhhhhhhhhcc
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVA  378 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~  378 (586)
                      +||.+||+.||.+|||+.|+|+||||+...........+.....+++|...++++..++..+.
T Consensus       246 ~li~~~L~~dP~~Rpta~e~L~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~klk~~~~~~~~  308 (444)
T 3soa_A          246 DLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVML  308 (444)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHHSCTTHHHHHHSCCCCCHHHHHHHHHHHHHHHHHTTCSCEEC
T ss_pred             HHHHHHcCCChhHCCCHHHHhcCccccCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999997532222222234556778889988999888877664

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=5.1e-53  Score=433.32  Aligned_cols=296  Identities=37%  Similarity=0.721  Sum_probs=257.0

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||+|++...... ....+.+.+|+.+++.| +||||+++++++.+.+.+
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~  103 (362)
T 2bdw_A           26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFH  103 (362)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred             CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC-HHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEE
Confidence            4557899999999999999999999999999999999866442 33456789999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |+|||||+||+|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.....+.+||+|||++.....
T Consensus       104 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~  183 (362)
T 2bdw_A          104 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND  183 (362)
T ss_dssp             EEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred             EEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence            99999999999999998888899999999999999999999999999999999999996544556799999999988766


Q ss_pred             CCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      .......+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+...+...+..+...++.+.|..+++.+++
T Consensus       184 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  263 (362)
T 2bdw_A          184 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS  263 (362)
T ss_dssp             CCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHH
T ss_pred             CcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHH
Confidence            555566789999999999975 6899999999999999999999999999999999999999988888888899999999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCccCCCCCCCccCCCccccchhhhhhhhhhhhhhhh
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLR  375 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~  375 (586)
                      ||.+||..||.+|||+.++|+||||............+.....++.|....+++..++.
T Consensus       264 li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  322 (362)
T 2bdw_A          264 LIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILT  322 (362)
T ss_dssp             HHHHHSCSSGGGSCCHHHHTTSHHHHTHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHhcCcccCCCcccccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999997532111111223344566777666666655544

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=4.6e-52  Score=425.16  Aligned_cols=267  Identities=37%  Similarity=0.666  Sum_probs=241.0

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCC---hhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT---EIDIDDVRREVEIMRHLPKHPNIVTYKEAYED  153 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~---~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~  153 (586)
                      ..+.++|++++.||+|+||+||+|++..+|+.||+|++.+.....   ....+.+.+|+.+|+.+ +||||+++++++++
T Consensus         8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~   86 (361)
T 2yab_A            8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-LHPNIITLHDVYEN   86 (361)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC-CCTTBCCEEEEEEC
T ss_pred             CChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC-CCcCCCcEEEEEEe
Confidence            356678999999999999999999999999999999998765432   12357899999999999 89999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCC-CCCceEEeecccc
Q 043828          154 KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLS  232 (586)
Q Consensus       154 ~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~-~~~~vkl~Dfg~a  232 (586)
                      ...+|+|||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+.... ....+||+|||++
T Consensus        87 ~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a  166 (361)
T 2yab_A           87 RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA  166 (361)
T ss_dssp             SSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence            999999999999999999998888899999999999999999999999999999999999995321 1237999999999


Q ss_pred             cccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCC
Q 043828          233 IFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS  311 (586)
Q Consensus       233 ~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  311 (586)
                      ............+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+..+....+....+.++...|+.++
T Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s  246 (361)
T 2yab_A          167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS  246 (361)
T ss_dssp             EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSC
T ss_pred             eEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCC
Confidence            88766655667789999999999974 68999999999999999999999999999999999999988888777778899


Q ss_pred             HHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       312 ~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ..+++||.+||..||.+|||+.|+|+||||+..
T Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  279 (361)
T 2yab_A          247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITPV  279 (361)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence            999999999999999999999999999999853

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=6.8e-53  Score=426.40  Aligned_cols=251  Identities=24%  Similarity=0.362  Sum_probs=210.6

Q ss_pred             ccCeeecceeccCCceEEEEEEEccC-----CcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe-
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIET-----GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED-  153 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~-----~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~-  153 (586)
                      .++|++++.||+|+||+||+|.+..+     ++.||+|++....  .......+.+|+.+|.++.+|||||++++++.. 
T Consensus        63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~--~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~  140 (353)
T 4ase_A           63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKP  140 (353)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred             HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--ChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec
Confidence            46899999999999999999987654     3679999986543  233456789999999999666999999999865 


Q ss_pred             CCeEEEEEeccCCCChHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeec
Q 043828          154 KDAIYLVMELCEGGELFDRIVNK----------------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFAD  217 (586)
Q Consensus       154 ~~~~~iv~E~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~  217 (586)
                      .+.+|||||||++|+|.++|...                ..+++..+..++.||+.||.|||+++||||||||+|||+  
T Consensus       141 ~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl--  218 (353)
T 4ase_A          141 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--  218 (353)
T ss_dssp             TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE--
T ss_pred             CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceee--
Confidence            45789999999999999999753                348999999999999999999999999999999999999  


Q ss_pred             CCCCCceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCH-HHH
Q 043828          218 GSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETE-EGI  291 (586)
Q Consensus       218 ~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~-~~~  291 (586)
                       +.++.+||+|||+|+.......   ....+||+.|||||++. +.|+.++|||||||+||||+| |..||.+.+. ..+
T Consensus       219 -~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~  297 (353)
T 4ase_A          219 -SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF  297 (353)
T ss_dssp             -CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH
T ss_pred             -CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHH
Confidence             6678999999999987644322   23467999999999986 579999999999999999998 9999988654 344


Q ss_pred             HHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          292 AHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       292 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ...+..+. .++.  .+.+++++.+||.+||+.||.+|||+.||++|
T Consensus       298 ~~~i~~g~-~~~~--p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          298 CRRLKEGT-RMRA--PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             HHHHHHTC-CCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcCC-CCCC--CccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            44555443 2222  24689999999999999999999999999987

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=2.2e-51  Score=415.12  Aligned_cols=259  Identities=37%  Similarity=0.660  Sum_probs=235.7

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ...++|++++.||+|+||.||+|.+..+|+.||+|++.+... .......+.+|+.+++.+ +||||+++++++...+.+
T Consensus        12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~   89 (328)
T 3fe3_A           12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKIL-NHPNIVKLFEVIETEKTL   89 (328)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred             CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEE
Confidence            456789999999999999999999999999999999987653 334457788999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.....
T Consensus        90 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~  166 (328)
T 3fe3_A           90 YLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL---DADMNIKIADFGFSNEFTV  166 (328)
T ss_dssp             EEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSTTCCGGGSS
T ss_pred             EEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEE---cCCCCEEEeeccCceecCC
Confidence            9999999999999999888899999999999999999999999999999999999999   6778999999999988776


Q ss_pred             CCceecccCCccccchhhhhc-cC-CCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLRR-NY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~~-~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      .......+||+.|+|||++.+ .+ +.++|||||||++|+|++|..||.+.+.......+..+...++.    .+++.+.
T Consensus       167 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~  242 (328)
T 3fe3_A          167 GGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCE  242 (328)
T ss_dssp             SCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT----TSCHHHH
T ss_pred             CCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC----CCCHHHH
Confidence            666677889999999999974 34 47899999999999999999999999999999999888776553    4789999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      +||.+||..||.+|||++|+++||||+...
T Consensus       243 ~li~~~L~~dP~~R~t~~eil~h~~~~~~~  272 (328)
T 3fe3_A          243 NLLKRFLVLNPIKRGTLEQIMKDRWINAGH  272 (328)
T ss_dssp             HHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred             HHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence            999999999999999999999999998643

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=7.3e-52  Score=417.92  Aligned_cols=285  Identities=30%  Similarity=0.591  Sum_probs=247.9

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .+.++|++++.||+|+||+||+|.+..+|+.||+|++....    .....+.+|+.+++.+ +||||+++++++.+.+.+
T Consensus         2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~   76 (321)
T 1tki_A            2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIA-RHRNILHLHESFESMEEL   76 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEE
T ss_pred             chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc----ccHHHHHHHHHHHHhC-CCCCCCeEeEEEecCCEE
Confidence            35689999999999999999999999999999999986432    2346788999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      |+|||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++. ...+.+||+|||++....
T Consensus        77 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~-~~~~~~kl~Dfg~a~~~~  155 (321)
T 1tki_A           77 VMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT-RRSSTIKIIEFGQARQLK  155 (321)
T ss_dssp             EEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-SSCCCEEECCCTTCEECC
T ss_pred             EEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcc-CCCCCEEEEECCCCeECC
Confidence            9999999999999999765 47999999999999999999999999999999999999953 126899999999999887


Q ss_pred             CCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          237 PGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      .........||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+..+...++...|+.++.++.
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~  235 (321)
T 1tki_A          156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM  235 (321)
T ss_dssp             TTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHH
T ss_pred             CCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHH
Confidence            7666677889999999999975 478999999999999999999999999999999999999988887777788999999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcCCCccCCCCCCCccCCCccccchhhhhhhhhhhhh
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKK  372 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  372 (586)
                      +||.+||..||.+|||+.|+|+||||+.....    ........++.+...+++.+.
T Consensus       236 ~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  288 (321)
T 1tki_A          236 DFVDRLLVKERKSRMTASEALQHPWLKQKIER----VSTKVIRTLKHRRYYHTLIKK  288 (321)
T ss_dssp             HHHHTTSCSSGGGSCCHHHHHHSHHHHSCGGG----SCCCCCCCHHHHHHHHHHHCC
T ss_pred             HHHHHHcCCChhHCcCHHHHhcChhhccCccc----ccHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999864321    223344555555554444433

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=2.6e-51  Score=418.57  Aligned_cols=258  Identities=30%  Similarity=0.558  Sum_probs=229.5

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++++.||+|+||+||+|++..+|+.||+|++.+...........+.+|+.+++.+.+||||+++++++.+.+.+|+
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            47899999999999999999999999999999999876544444567788999999998789999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC-CC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~  238 (586)
                      |||||+||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|.... ..
T Consensus       102 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl---~~~g~ikL~DFG~a~~~~~~~  178 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMCKEGICNG  178 (353)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCC--
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEE---CCCCCEEEccccceeecccCC
Confidence            99999999999999988899999999999999999999999999999999999999   677899999999998643 23


Q ss_pred             CceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          239 EQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                      ......+||+.|+|||++. ..|+.++|||||||++|+|++|.+||.+.+..++...+..+...++.    .++..+.+|
T Consensus       179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~----~~~~~~~~l  254 (353)
T 3txo_A          179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT----WLHEDATGI  254 (353)
T ss_dssp             -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT----TSCHHHHHH
T ss_pred             ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHH
Confidence            3445678999999999986 46999999999999999999999999999999999999998876653    488999999


Q ss_pred             HHHccCCCCCCCCCH------HHHhcCCCccCC
Q 043828          318 VKNMLDPNPYNRLTL------EEVLENPWIKND  344 (586)
Q Consensus       318 i~~~L~~dp~~Rps~------~eil~hp~~~~~  344 (586)
                      |.+||.+||.+||++      +++++||||+..
T Consensus       255 i~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~  287 (353)
T 3txo_A          255 LKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI  287 (353)
T ss_dssp             HHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred             HHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence            999999999999999      899999999875

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=1.1e-50  Score=411.10  Aligned_cols=257  Identities=32%  Similarity=0.582  Sum_probs=232.6

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++++.||+|+||+||+|++..+|+.||+|++.+...........+.+|+.+++.+ +||||+++++++.+.+.+|+
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~l~~~~~~~~~~~l   82 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCF   82 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-CCCcCcceEEEEEeCCEEEE
Confidence            46899999999999999999999999999999999876443334467789999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC-CC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~  238 (586)
                      ||||++||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.... ..
T Consensus        83 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~~  159 (337)
T 1o6l_A           83 VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDG  159 (337)
T ss_dssp             EEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCCTT
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEE---CCCCCEEEeeccchhhcccCC
Confidence            99999999999999888899999999999999999999999999999999999999   677899999999998643 33


Q ss_pred             CceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          239 EQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                      ......+||+.|+|||++. ..|+.++|||||||++|+|++|..||.+.+...+...+......++.    .+++++++|
T Consensus       160 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~l  235 (337)
T 1o6l_A          160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSL  235 (337)
T ss_dssp             CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT----TSCHHHHHH
T ss_pred             CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHH
Confidence            3455678999999999986 46899999999999999999999999999999988888888776653    589999999


Q ss_pred             HHHccCCCCCCCC-----CHHHHhcCCCccCC
Q 043828          318 VKNMLDPNPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       318 i~~~L~~dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      |.+||+.||.+||     +++++++||||+..
T Consensus       236 i~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~  267 (337)
T 1o6l_A          236 LAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             HHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence            9999999999999     99999999999864

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=9.3e-51  Score=414.75  Aligned_cols=291  Identities=40%  Similarity=0.675  Sum_probs=230.6

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      ..+.++|++.+.||+|+||.||+|++..+++.||+|++....     ..+.+.+|+.+++++ +||||+++++++.....
T Consensus        49 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~  122 (349)
T 2w4o_A           49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRL-SHPNIIKLKEIFETPTE  122 (349)
T ss_dssp             SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred             ccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhC-CCCCCcceeeeEecCCe
Confidence            345678999999999999999999999999999999997543     235678899999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|+||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+.++.+||+|||++....
T Consensus       123 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~  202 (349)
T 2w4o_A          123 ISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE  202 (349)
T ss_dssp             EEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred             EEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence            99999999999999999888889999999999999999999999999999999999999654457899999999998765


Q ss_pred             CCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHH-HHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          237 PGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      .........||+.|+|||++.+ .++.++|||||||++|+|++|..||...... .....+......+..+.++.++..+
T Consensus       203 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  282 (349)
T 2w4o_A          203 HQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNA  282 (349)
T ss_dssp             ----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHH
T ss_pred             cccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHH
Confidence            5544556789999999999874 6899999999999999999999999765544 4667777777777777778899999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCccCCCCCCCccCCCccccchhhhhhhhhhhhhhhh
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLR  375 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~  375 (586)
                      .+||.+||..||.+|||+.++|+||||.......  .........++.+....++++.+..
T Consensus       283 ~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  341 (349)
T 2w4o_A          283 KDLVRKLIVLDPKKRLTTFQALQHPWVTGKAANF--VHMDTAQKKLQEFNARRKLKAAVKA  341 (349)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTCCC--SCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCcccCCCccch--hhhcchHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999998653321  1122334556666666666655443

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=2.3e-51  Score=419.73  Aligned_cols=297  Identities=34%  Similarity=0.650  Sum_probs=239.0

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCC--hhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT--EIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      +.++|++.+.||+|+||+||+|++..+|+.||+|++.......  ....+.+.+|+.+++.+ +||||+++++++.+.+.
T Consensus        22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~  100 (351)
T 3c0i_A           22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-KHPHIVELLETYSSDGM  100 (351)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTE
T ss_pred             cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCE
Confidence            4468999999999999999999999999999999997543221  22457899999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          157 IYLVMELCEGGELFDRIVNK----GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                      +|+|||||+|++|.+++...    ..+++..++.++.||+.||.|||++||+||||||+|||++.......+||+|||++
T Consensus       101 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a  180 (351)
T 3c0i_A          101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA  180 (351)
T ss_dssp             EEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred             EEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence            99999999999998877542    35899999999999999999999999999999999999965444566999999999


Q ss_pred             cccCCCCc-eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          233 IFFKPGEQ-FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       233 ~~~~~~~~-~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      ........ ....+||+.|+|||++.+ .|+.++|||||||++|+|++|..||.+. .......+..+...++...|+.+
T Consensus       181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~i~~~~~~~~~~~~~~~  259 (351)
T 3c0i_A          181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGIIKGKYKMNPRQWSHI  259 (351)
T ss_dssp             EECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS-HHHHHHHHHHTCCCCCHHHHTTS
T ss_pred             eEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHcCCCCCCccccccC
Confidence            87654432 345689999999999964 6899999999999999999999999875 45667777777776666566789


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCCCCCCccCCCccccchhhhhhhhhhhhhhhhhc
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVV  377 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~  377 (586)
                      +..+++||.+||..||.+|||+.++|+||||+.................++.+....+++..++..+
T Consensus       260 s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  326 (351)
T 3c0i_A          260 SESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAV  326 (351)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTHHHHSCCSCCHHHHHHHHHHHHHHC---------
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999863211111111223445566666666655554443

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.7e-50  Score=409.15  Aligned_cols=266  Identities=38%  Similarity=0.694  Sum_probs=237.8

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCC---hhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT---EIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~---~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||+|++.+.....   ....+.+.+|+.+++.+ +||||+++++++.+.
T Consensus         8 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~   86 (326)
T 2y0a_A            8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYENK   86 (326)
T ss_dssp             CHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECS
T ss_pred             CcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEeC
Confidence            45578999999999999999999999999999999998764332   22467899999999999 899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCC-CCCceEEeeccccc
Q 043828          155 DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSI  233 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~-~~~~vkl~Dfg~a~  233 (586)
                      ..+|+|||||+|++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+.... ....+||+|||++.
T Consensus        87 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~  166 (326)
T 2y0a_A           87 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH  166 (326)
T ss_dssp             SEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             CEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence            99999999999999999998888899999999999999999999999999999999999995321 23389999999998


Q ss_pred             ccCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCH
Q 043828          234 FFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       234 ~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      ............||+.|+|||++. ..++.++|||||||++|+|++|..||.+.+.......+......++...++.++.
T Consensus       167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (326)
T 2y0a_A          167 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSA  246 (326)
T ss_dssp             ECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCH
T ss_pred             ECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCH
Confidence            876555556678999999999997 4689999999999999999999999999999888888888877776665678899


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .+++||.+||..||.+|||+.++|+||||+..
T Consensus       247 ~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~  278 (326)
T 2y0a_A          247 LAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK  278 (326)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence            99999999999999999999999999999854

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=1e-50  Score=416.19  Aligned_cols=258  Identities=34%  Similarity=0.553  Sum_probs=210.2

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++++.||+|+||+||+|++..+|+.||+|++......    .+.+.+|+.+++.+ +||||+++++++.+...+|
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~   92 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----DENVQREIINHRSL-RHPNIVRFKEVILTPTHLA   92 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS----CHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc----cHHHHHHHHHHHhC-CCCCCCcEEEEEeeCCEEE
Confidence            346899999999999999999999999999999999765432    25688999999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      +|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++. +..+.+||+|||++......
T Consensus        93 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~-~~~~~~kl~Dfg~a~~~~~~  171 (361)
T 3uc3_A           93 IIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDG-SPAPRLKICDFGYSKSSVLH  171 (361)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECS-SSSCCEEECCCCCC------
T ss_pred             EEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcC-CCCceEEEeecCcccccccc
Confidence            99999999999999988888999999999999999999999999999999999999942 22345999999999865444


Q ss_pred             CceecccCCccccchhhhhc-cCCCc-chHHHHHHHHHHHhhCCCCCCCCCH----HHHHHHHHhCccCCCCCCCCCCCH
Q 043828          239 EQFCEIVGSPYYMAPEVLRR-NYGPE-IDVWSAGVIIYILLCGVPPFWAETE----EGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~~-~~~~~-~DiwslG~il~~ll~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      ......+||+.|+|||++.+ .++.+ +|||||||++|+|++|..||.+...    ......+......++.  ...+++
T Consensus       172 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~  249 (361)
T 3uc3_A          172 SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPD--DIRISP  249 (361)
T ss_dssp             ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCT--TSCCCH
T ss_pred             CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCC--cCCCCH
Confidence            44556789999999999864 45444 8999999999999999999976443    4455555555554433  346899


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .+++||.+||..||.+|||+.|+++||||...
T Consensus       250 ~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          250 ECCHLISRIFVADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             HHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence            99999999999999999999999999999754

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=2.4e-50  Score=416.15  Aligned_cols=259  Identities=27%  Similarity=0.521  Sum_probs=227.5

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.++.++.+||||++++++|.+.+.+|
T Consensus        50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  129 (396)
T 4dc2_A           50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF  129 (396)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence            35789999999999999999999999999999999988765554445678899999988778999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc-CC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-KP  237 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~-~~  237 (586)
                      +|||||+||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.. ..
T Consensus       130 lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl---~~~g~ikL~DFGla~~~~~~  206 (396)
T 4dc2_A          130 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRP  206 (396)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCT
T ss_pred             EEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE---CCCCCEEEeecceeeecccC
Confidence            999999999999999988899999999999999999999999999999999999999   67789999999999863 34


Q ss_pred             CCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCC---------CHHHHHHHHHhCccCCCCCCC
Q 043828          238 GEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAE---------TEEGIAHAIIRGKIDFERDPW  307 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~---------~~~~~~~~i~~~~~~~~~~~~  307 (586)
                      .......+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||...         ....+...+......++.   
T Consensus       207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~---  283 (396)
T 4dc2_A          207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR---  283 (396)
T ss_dssp             TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCT---
T ss_pred             CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCC---
Confidence            445567789999999999974 6899999999999999999999999632         334466677777666553   


Q ss_pred             CCCCHHHHHHHHHccCCCCCCCCCH------HHHhcCCCccCC
Q 043828          308 PKVSKEAKELVKNMLDPNPYNRLTL------EEVLENPWIKND  344 (586)
Q Consensus       308 ~~~~~~~~~li~~~L~~dp~~Rps~------~eil~hp~~~~~  344 (586)
                       .++..+++||.+||+.||.+||++      .|+++||||+..
T Consensus       284 -~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i  325 (396)
T 4dc2_A          284 -SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  325 (396)
T ss_dssp             -TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred             -cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence             589999999999999999999985      899999999865

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=1.1e-50  Score=421.45  Aligned_cols=262  Identities=37%  Similarity=0.690  Sum_probs=221.1

Q ss_pred             CCCcccCeeec-ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe-
Q 043828           76 EGNILDKYTFG-KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED-  153 (586)
Q Consensus        76 ~~~~~~~y~~~-~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~-  153 (586)
                      .+.+.++|.+. +.||+|+||+||+|++..+|+.||+|++...        ..+.+|+.++.++.+||||++++++|.. 
T Consensus        56 ~~~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~  127 (400)
T 1nxk_A           56 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENL  127 (400)
T ss_dssp             CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEE
T ss_pred             CCcccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeec
Confidence            45677889987 6899999999999999999999999998532        4567899988666699999999999876 


Q ss_pred             ---CCeEEEEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEee
Q 043828          154 ---KDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID  228 (586)
Q Consensus       154 ---~~~~~iv~E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~D  228 (586)
                         ...+|||||||+||+|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++....++.+||+|
T Consensus       128 ~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~D  207 (400)
T 1nxk_A          128 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTD  207 (400)
T ss_dssp             ETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECC
T ss_pred             ccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEe
Confidence               567999999999999999998643  599999999999999999999999999999999999996444478999999


Q ss_pred             cccccccCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHH----HHHHHHHhCccCCC
Q 043828          229 FGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEE----GIAHAIIRGKIDFE  303 (586)
Q Consensus       229 fg~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~i~~~~~~~~  303 (586)
                      ||++............+||+.|+|||++. ..|+.++|||||||++|+|++|..||.+....    .....+..+.+.++
T Consensus       208 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~  287 (400)
T 1nxk_A          208 FGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP  287 (400)
T ss_dssp             CTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCC
T ss_pred             cccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCC
Confidence            99998766555556778999999999986 56899999999999999999999999765432    24566777888888


Q ss_pred             CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       304 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      ...|..++.++++||.+||..||.+|||+.++++||||....
T Consensus       288 ~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~  329 (400)
T 1nxk_A          288 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  329 (400)
T ss_dssp             TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTT
T ss_pred             CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCC
Confidence            878889999999999999999999999999999999998643

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=9.5e-50  Score=395.73  Aligned_cols=267  Identities=39%  Similarity=0.772  Sum_probs=242.9

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||+|++..... .....+.+.+|+.+++++ +||||+++++++...+..
T Consensus         3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   80 (284)
T 3kk8_A            3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFH   80 (284)
T ss_dssp             TTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred             hhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC-CHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEcCCEE
Confidence            456899999999999999999999999999999999977654 333457788999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |+||||+++++|.+.+.....+++..+..++.|++.||.|||++||+||||||+||++..+...+.+||+|||++.....
T Consensus        81 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~  160 (284)
T 3kk8_A           81 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND  160 (284)
T ss_dssp             EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred             EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence            99999999999999998888899999999999999999999999999999999999996544556699999999987766


Q ss_pred             CCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      ........||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+..+...++.+.+..+++.+.+
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T 3kk8_A          161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKS  240 (284)
T ss_dssp             SCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHH
T ss_pred             CccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHH
Confidence            655566789999999999874 5899999999999999999999999999999999999999888888888899999999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCccCCCC
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWIKNDNH  346 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~~~~~~  346 (586)
                      ||.+||+.||.+|||+.|+|+||||++...
T Consensus       241 li~~~l~~dp~~Rps~~~~l~h~~~~~~~~  270 (284)
T 3kk8_A          241 LIDSMLTVNPKKRITADQALKVPWICNRER  270 (284)
T ss_dssp             HHHHHSCSSTTTSCCHHHHTTSHHHHSCCC
T ss_pred             HHHHHcccChhhCCCHHHHhcCccccCChh
Confidence            999999999999999999999999987543

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=8.5e-50  Score=412.01  Aligned_cols=266  Identities=35%  Similarity=0.657  Sum_probs=239.4

Q ss_pred             CCCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           76 EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        76 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      .+.+.++|++++.||+|+||.||+|.+..+|+.||+|++....   ......+.+|+.+|+.+ +||||+++++++.+..
T Consensus        46 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~  121 (387)
T 1kob_A           46 QGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKY  121 (387)
T ss_dssp             CSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSS
T ss_pred             CCccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc---hhhHHHHHHHHHHHHhC-CCcCCCeEEEEEEeCC
Confidence            3567789999999999999999999999999999999997543   22345788999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      .+|+|||||+||+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++. +..+.+||+|||++..
T Consensus       122 ~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-~~~~~vkL~DFG~a~~  200 (387)
T 1kob_A          122 EMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-KKASSVKIIDFGLATK  200 (387)
T ss_dssp             EEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTCCCEEECCCTTCEE
T ss_pred             EEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEec-CCCCceEEEeccccee
Confidence            999999999999999988764 36999999999999999999999999999999999999953 2456899999999988


Q ss_pred             cCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          235 FKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       235 ~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ...........||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+......++...+..+++.
T Consensus       201 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  280 (387)
T 1kob_A          201 LNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPE  280 (387)
T ss_dssp             CCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHH
T ss_pred             cCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHH
Confidence            766665666789999999999974 5889999999999999999999999999998889999988888887778889999


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhcCCCccCCCC
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH  346 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~  346 (586)
                      +++||.+||..||.+|||+.++|+||||+....
T Consensus       281 ~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  313 (387)
T 1kob_A          281 AKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS  313 (387)
T ss_dssp             HHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred             HHHHHHHHcCCChhHCcCHHHHhhCccccCCcc
Confidence            999999999999999999999999999987543

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=7e-50  Score=402.34  Aligned_cols=255  Identities=28%  Similarity=0.563  Sum_probs=231.8

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++++.||+|+||.||+|++..+|+.||+|++.+.........+.+.+|+.+++.+ +||||+++++++.+...+|+
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~l   83 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFM   83 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-CCCCCceEeEEEEeCCEEEE
Confidence            46899999999999999999999999999999999876443334467788999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      ||||++||+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.....  
T Consensus        84 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~Dfg~a~~~~~--  158 (318)
T 1fot_A           84 IMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPD--  158 (318)
T ss_dssp             EECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTSCEEECCCSSCEECSS--
T ss_pred             EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEE---cCCCCEEEeecCcceecCC--
Confidence            99999999999999988899999999999999999999999999999999999999   6778999999999987543  


Q ss_pred             ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHH
Q 043828          240 QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV  318 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  318 (586)
                      .....+||+.|+|||++. ..|+.++|||||||++|+|++|..||.+.+.......+......++    +.++.++++||
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~li  234 (318)
T 1fot_A          159 VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLL  234 (318)
T ss_dssp             CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHH
T ss_pred             ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHHH
Confidence            234568999999999986 4689999999999999999999999999999999999988876655    35789999999


Q ss_pred             HHccCCCCCCCC-----CHHHHhcCCCccCC
Q 043828          319 KNMLDPNPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       319 ~~~L~~dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      .+||..||.+||     +++++++||||+..
T Consensus       235 ~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~  265 (318)
T 1fot_A          235 SRLITRDLSQRLGNLQNGTEDVKNHPWFKEV  265 (318)
T ss_dssp             HHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             HHHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence            999999999999     99999999999864

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=2.9e-50  Score=409.18  Aligned_cols=259  Identities=26%  Similarity=0.456  Sum_probs=231.9

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++.+.||+|+||.||+|++..+|+.||+|++.+...........+..|..++..+.+||||+++++++++.+.+|
T Consensus        15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~   94 (345)
T 1xjd_A           15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF   94 (345)
T ss_dssp             -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence            34789999999999999999999999999999999987643333345678889999987768999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC-
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP-  237 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~-  237 (586)
                      +|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++..... 
T Consensus        95 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~  171 (345)
T 1xjd_A           95 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLG  171 (345)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCT
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEE---CCCCCEEEeEChhhhhcccC
Confidence            999999999999999988889999999999999999999999999999999999999   6778999999999986432 


Q ss_pred             CCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      .......+||+.|+|||++.+ .|+.++|||||||++|+|++|..||.+.+...+...+......++    ..+++.+++
T Consensus       172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~  247 (345)
T 1xjd_A          172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP----RWLEKEAKD  247 (345)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHH
T ss_pred             CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCC----cccCHHHHH
Confidence            234456789999999999864 689999999999999999999999999999999999888776554    358999999


Q ss_pred             HHHHccCCCCCCCCCHH-HHhcCCCccCC
Q 043828          317 LVKNMLDPNPYNRLTLE-EVLENPWIKND  344 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~-eil~hp~~~~~  344 (586)
                      ||.+||..||.+||++. ++++||||+..
T Consensus       248 li~~lL~~dp~~R~~~~~~i~~hp~f~~~  276 (345)
T 1xjd_A          248 LLVKLFVREPEKRLGVRGDIRQHPLFREI  276 (345)
T ss_dssp             HHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             HHHHHhcCCHhHcCCChHHHHcCccccCC
Confidence            99999999999999998 99999999865

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.2e-49  Score=405.22  Aligned_cols=258  Identities=27%  Similarity=0.520  Sum_probs=229.2

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++++.||+|+||.||+|++..+|+.||+|++.+...........+.+|+.+++++.+||||+++++++.+.+.+|+
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   87 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF   87 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence            46899999999999999999999999999999999887666665667789999999988789999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC-CC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~-~~  238 (586)
                      ||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.... ..
T Consensus        88 v~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~DFG~a~~~~~~~  164 (345)
T 3a8x_A           88 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPG  164 (345)
T ss_dssp             EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCGGGCBCSCCTT
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---CCCCCEEEEeccccccccCCC
Confidence            99999999999999888889999999999999999999999999999999999999   677899999999998642 33


Q ss_pred             CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCC---------CCHHHHHHHHHhCccCCCCCCCC
Q 043828          239 EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWA---------ETEEGIAHAIIRGKIDFERDPWP  308 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~---------~~~~~~~~~i~~~~~~~~~~~~~  308 (586)
                      ......+||+.|+|||++.+ .|+.++|||||||++|+|++|..||..         .....+...+......++    .
T Consensus       165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p----~  240 (345)
T 3a8x_A          165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----R  240 (345)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCC----T
T ss_pred             CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCC----C
Confidence            44556789999999999874 689999999999999999999999965         334456666777666554    3


Q ss_pred             CCCHHHHHHHHHccCCCCCCCCCH------HHHhcCCCccCC
Q 043828          309 KVSKEAKELVKNMLDPNPYNRLTL------EEVLENPWIKND  344 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~Rps~------~eil~hp~~~~~  344 (586)
                      .++..+++||.+||+.||.+||++      .++++||||++.
T Consensus       241 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~  282 (345)
T 3a8x_A          241 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  282 (345)
T ss_dssp             TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred             CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence            589999999999999999999995      899999999864

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=1.9e-50  Score=419.12  Aligned_cols=262  Identities=31%  Similarity=0.490  Sum_probs=230.5

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.+++.+ +|||||++++++.+...+|
T Consensus        67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~  145 (410)
T 3v8s_A           67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLY  145 (410)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE
T ss_pred             CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEEE
Confidence            357899999999999999999999999999999999764332222234578899999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||||+||+|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|......
T Consensus       146 lV~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl---~~~g~ikL~DFG~a~~~~~~  221 (410)
T 3v8s_A          146 MVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKE  221 (410)
T ss_dssp             EEECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCTT
T ss_pred             EEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeE---CCCCCEEEeccceeEeeccC
Confidence            99999999999998875 469999999999999999999999999999999999999   67889999999999876544


Q ss_pred             Cc--eecccCCccccchhhhhc-c----CCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCC
Q 043828          239 EQ--FCEIVGSPYYMAPEVLRR-N----YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS  311 (586)
Q Consensus       239 ~~--~~~~~gt~~y~aPE~l~~-~----~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  311 (586)
                      ..  ....+||+.|+|||++.+ .    |+.++|||||||++|+|++|.+||.+.+.......+......+..+.+..++
T Consensus       222 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s  301 (410)
T 3v8s_A          222 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDIS  301 (410)
T ss_dssp             SEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCC
T ss_pred             CcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCccccc
Confidence            32  236789999999999863 2    7889999999999999999999999999999999888765444444456799


Q ss_pred             HHHHHHHHHccCCCCCC--CCCHHHHhcCCCccCCC
Q 043828          312 KEAKELVKNMLDPNPYN--RLTLEEVLENPWIKNDN  345 (586)
Q Consensus       312 ~~~~~li~~~L~~dp~~--Rps~~eil~hp~~~~~~  345 (586)
                      +++++||.+||..+|.+  ||+++||++||||++..
T Consensus       302 ~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~  337 (410)
T 3v8s_A          302 KEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQ  337 (410)
T ss_dssp             HHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSS
T ss_pred             HHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCC
Confidence            99999999999999988  99999999999999753

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=5.8e-50  Score=408.28  Aligned_cols=259  Identities=27%  Similarity=0.485  Sum_probs=232.9

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++++.||+|+||.||+|++..+|+.||+|++.+.........+.+..|..++..+.+||||+++++++++.+.+|
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            34789999999999999999999999999999999987654333456778899999998878999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC-C
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-P  237 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~-~  237 (586)
                      +|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.... .
T Consensus        98 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~  174 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWD  174 (353)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCT
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE---cCCCcEEEEeCCcccccccC
Confidence            999999999999999988889999999999999999999999999999999999999   677899999999998643 2


Q ss_pred             CCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      .......+||+.|+|||++. ..|+.++|||||||++|+|++|..||.+.+..++...+......++.    .+++.+++
T Consensus       175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~  250 (353)
T 2i0e_A          175 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVA  250 (353)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT----TSCHHHHH
T ss_pred             CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCC----CCCHHHHH
Confidence            33445678999999999986 46899999999999999999999999999999999999988776653    58999999


Q ss_pred             HHHHccCCCCCCCC-----CHHHHhcCCCccCC
Q 043828          317 LVKNMLDPNPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       317 li~~~L~~dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      ||.+||..||.+||     +++++++||||+..
T Consensus       251 li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~  283 (353)
T 2i0e_A          251 ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  283 (353)
T ss_dssp             HHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred             HHHHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence            99999999999999     47999999999864

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=3.4e-50  Score=397.46  Aligned_cols=264  Identities=45%  Similarity=0.819  Sum_probs=241.7

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      +.+.++|++.+.||+|+||.||+|.+..++..+|+|++......   ..+.+.+|+.+++++ +||||+++++++.+...
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~---~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~   80 (277)
T 3f3z_A            5 GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQEIEIMKSL-DHPNIIRLYETFEDNTD   80 (277)
T ss_dssp             -CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSE
T ss_pred             hhhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc---hHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCe
Confidence            45667899999999999999999999999999999999765433   357889999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|+||||+++++|.+++.....+++..+..++.|++.||.|||++||+||||||+||++..++.++.+||+|||++....
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~  160 (277)
T 3f3z_A           81 IYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK  160 (277)
T ss_dssp             EEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             EEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence            99999999999999999888889999999999999999999999999999999999999655567899999999998877


Q ss_pred             CCCceecccCCccccchhhhhccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          237 PGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      .........||+.|+|||++.+.++.++|||||||++|+|++|..||...+.......+..+...++...+..+++.+.+
T Consensus       161 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (277)
T 3f3z_A          161 PGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAES  240 (277)
T ss_dssp             TTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHH
T ss_pred             CccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHH
Confidence            66666677899999999999888999999999999999999999999999999999999988887776666688999999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ||.+||+.||.+|||+.++|+||||+..
T Consensus       241 li~~~l~~dp~~R~s~~~~l~h~~~~~~  268 (277)
T 3f3z_A          241 LIRRLLTKSPKQRITSLQALEHEWFEKQ  268 (277)
T ss_dssp             HHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred             HHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence            9999999999999999999999999853

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=1.3e-49  Score=394.88  Aligned_cols=264  Identities=36%  Similarity=0.662  Sum_probs=228.4

Q ss_pred             CCCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           76 EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        76 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      .+.+.++|.+.+.||+|+||.||+|.+..++..+|+|++.....  ....+.+.+|+.+++++ +||||+++++++.+..
T Consensus        17 ~g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~   93 (285)
T 3is5_A           17 QGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS--QVPMEQIEAEIEVLKSL-DHPNIIKIFEVFEDYH   93 (285)
T ss_dssp             SSCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--CSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSS
T ss_pred             CCChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc--chhHHHHHHHHHHHHhC-CCchHHhHHHheecCC
Confidence            35667899999999999999999999999999999999987653  33457899999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          156 AIYLVMELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                      .+|+||||+++|+|.+++..    ...+++..++.++.||+.||.|||++||+||||||+||++...+..+.+||+|||+
T Consensus        94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~  173 (285)
T 3is5_A           94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGL  173 (285)
T ss_dssp             EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCC
T ss_pred             eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeec
Confidence            99999999999999998854    36799999999999999999999999999999999999997655678899999999


Q ss_pred             ccccCCCCceecccCCccccchhhhhccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCC
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS  311 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  311 (586)
                      +.............||+.|+|||++.+.++.++|||||||++|+|++|..||.+.+.......+......+... ...++
T Consensus       174 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~  252 (285)
T 3is5_A          174 AELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE-CRPLT  252 (285)
T ss_dssp             CCC----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC---CCCC
T ss_pred             ceecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccc-cCcCC
Confidence            98766555556678999999999998889999999999999999999999999998888877777666554433 23478


Q ss_pred             HHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       312 ~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      +.+.+||.+||+.||.+|||+.|+|+||||++
T Consensus       253 ~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          253 PQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             HHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence            99999999999999999999999999999985

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=6e-50  Score=407.07  Aligned_cols=260  Identities=37%  Similarity=0.658  Sum_probs=231.8

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .+.++|++.+.||+|+||+||+|.+..+|+.||+|++.+....       ..+|+.++.++.+||||+++++++.+...+
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~   91 (342)
T 2qr7_A           19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD-------PTEEIEILLRYGQHPNIITLKDVYDDGKYV   91 (342)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC-------CHHHHHHHHHHTTSTTBCCEEEEEECSSEE
T ss_pred             CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC-------hHHHHHHHHHhcCCCCcCeEEEEEEcCCEE
Confidence            4567899999999999999999999999999999999765422       356888888887899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCC-CCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~-~~~~vkl~Dfg~a~~~~  236 (586)
                      |+|||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+.+.+ ..+.+||+|||++....
T Consensus        92 ~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~  171 (342)
T 2qr7_A           92 YVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR  171 (342)
T ss_dssp             EEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence            99999999999999999888999999999999999999999999999999999999985432 23469999999998764


Q ss_pred             CC-CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCC---CCHHHHHHHHHhCccCCCCCCCCCCC
Q 043828          237 PG-EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRGKIDFERDPWPKVS  311 (586)
Q Consensus       237 ~~-~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~---~~~~~~~~~i~~~~~~~~~~~~~~~~  311 (586)
                      .. ......+||+.|+|||++.+ .|+.++|||||||++|+|++|..||..   .+..++...+..+.+.++...|+.++
T Consensus       172 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s  251 (342)
T 2qr7_A          172 AENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVS  251 (342)
T ss_dssp             CTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSC
T ss_pred             CCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCC
Confidence            43 33456789999999999974 588999999999999999999999975   46778888899999888888888999


Q ss_pred             HHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       312 ~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ..+++||.+||..||.+|||+.++++||||...
T Consensus       252 ~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~  284 (342)
T 2qr7_A          252 DTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW  284 (342)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence            999999999999999999999999999999754

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1.7e-49  Score=404.78  Aligned_cols=257  Identities=29%  Similarity=0.561  Sum_probs=233.7

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ...++|++++.||+|+||.||+|++..+|+.||+|++.+.........+.+.+|+.+++.+ +||||+++++++.+...+
T Consensus        38 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~  116 (350)
T 1rdq_E           38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNL  116 (350)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEE
T ss_pred             CCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEE
Confidence            4567999999999999999999999999999999999876543344567889999999999 999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |+||||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.....
T Consensus       117 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~g~~kL~DFg~a~~~~~  193 (350)
T 1rdq_E          117 YMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG  193 (350)
T ss_dssp             EEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSS
T ss_pred             EEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEE---CCCCCEEEcccccceeccC
Confidence            9999999999999999988889999999999999999999999999999999999999   6778999999999987643


Q ss_pred             CCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      .  ....+||+.|+|||++. ..|+.++|||||||++|+|++|.+||.+.+...+...+..+...++    ..++..+.+
T Consensus       194 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~  267 (350)
T 1rdq_E          194 R--TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKD  267 (350)
T ss_dssp             C--BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTCCHHHHH
T ss_pred             C--cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHH
Confidence            3  34568999999999986 4689999999999999999999999999999999999998877654    358999999


Q ss_pred             HHHHccCCCCCCCCC-----HHHHhcCCCccCC
Q 043828          317 LVKNMLDPNPYNRLT-----LEEVLENPWIKND  344 (586)
Q Consensus       317 li~~~L~~dp~~Rps-----~~eil~hp~~~~~  344 (586)
                      ||.+||+.||.+||+     ++++++||||+..
T Consensus       268 li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~  300 (350)
T 1rdq_E          268 LLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             HHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             HHHHHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence            999999999999998     9999999999864

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=1.6e-49  Score=407.85  Aligned_cols=258  Identities=25%  Similarity=0.489  Sum_probs=222.0

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHH-HhCCCCCCeeEEEEEEEeCCeE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM-RHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l-~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ..++|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|..++ +.+ +||||+++++++.+.+.+
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~-~hp~Iv~l~~~~~~~~~~  114 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTADKL  114 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCC-CCTTBCCEEEEEECSSEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEeCCEE
Confidence            346899999999999999999999999999999999887655544456677787774 555 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC-
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~-  236 (586)
                      |+|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.... 
T Consensus       115 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~ikL~DFG~a~~~~~  191 (373)
T 2r5t_A          115 YFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIE  191 (373)
T ss_dssp             EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCBCGGGBC
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---CCCCCEEEeeCcccccccc
Confidence            9999999999999999988889999999999999999999999999999999999999   677899999999998643 


Q ss_pred             CCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          237 PGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      ........+||+.|+|||++.+ .|+.++|||||||++|+|++|..||.+.+..++...+......++    +.++..++
T Consensus       192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~~~~~  267 (373)
T 2r5t_A          192 HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSAR  267 (373)
T ss_dssp             CCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCC----SSSCHHHH
T ss_pred             CCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC----CCCCHHHH
Confidence            3344556789999999999864 689999999999999999999999999999999999988766554    36899999


Q ss_pred             HHHHHccCCCCCCCCCH----HHHhcCCCccCC
Q 043828          316 ELVKNMLDPNPYNRLTL----EEVLENPWIKND  344 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~----~eil~hp~~~~~  344 (586)
                      +||.+||+.||.+||++    .++++||||+..
T Consensus       268 ~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~  300 (373)
T 2r5t_A          268 HLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLI  300 (373)
T ss_dssp             HHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHcccCHHhCCCCCCCHHHHhCCccccCC
Confidence            99999999999999986    699999999864

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=1.9e-49  Score=408.07  Aligned_cols=258  Identities=27%  Similarity=0.525  Sum_probs=230.9

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++++.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+|+.+ +|||||+++++|.+.+.+|
T Consensus        13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~   91 (384)
T 4fr4_A           13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-EHPFLVNLWYSFQDEEDMF   91 (384)
T ss_dssp             CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEE
T ss_pred             ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCCEEE
Confidence            357899999999999999999999999999999999876544444567889999999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      +|||||.||+|..++.....+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++......
T Consensus        92 lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---~~~g~vkL~DFG~a~~~~~~  168 (384)
T 4fr4_A           92 MVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRE  168 (384)
T ss_dssp             EEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCTT
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE---CCCCCEEEeccceeeeccCC
Confidence            999999999999999988899999999999999999999999999999999999999   67789999999999987766


Q ss_pred             CceecccCCccccchhhhhc----cCCCcchHHHHHHHHHHHhhCCCCCCC---CCHHHHHHHHHhCccCCCCCCCCCCC
Q 043828          239 EQFCEIVGSPYYMAPEVLRR----NYGPEIDVWSAGVIIYILLCGVPPFWA---ETEEGIAHAIIRGKIDFERDPWPKVS  311 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~~----~~~~~~DiwslG~il~~ll~g~~pf~~---~~~~~~~~~i~~~~~~~~~~~~~~~~  311 (586)
                      ......+||+.|+|||++..    .|+.++|||||||++|+|++|..||..   .........+......++    ..++
T Consensus       169 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p----~~~s  244 (384)
T 4fr4_A          169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP----SAWS  244 (384)
T ss_dssp             CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCC----TTSC
T ss_pred             CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCC----CcCC
Confidence            66677899999999999852    488999999999999999999999974   344556666666655544    3578


Q ss_pred             HHHHHHHHHccCCCCCCCCC-HHHHhcCCCccCC
Q 043828          312 KEAKELVKNMLDPNPYNRLT-LEEVLENPWIKND  344 (586)
Q Consensus       312 ~~~~~li~~~L~~dp~~Rps-~~eil~hp~~~~~  344 (586)
                      ..+.+||.+||+.||.+||+ ++++++||||+..
T Consensus       245 ~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~  278 (384)
T 4fr4_A          245 QEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDI  278 (384)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence            99999999999999999998 9999999999865

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=4.6e-49  Score=393.23  Aligned_cols=259  Identities=29%  Similarity=0.516  Sum_probs=225.8

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      +...++|++.+.||+|+||+||+|.+..+|+.||+|++......   ..+.+.+|+.+++.+ +||||+++++++...+.
T Consensus        16 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~   91 (297)
T 3fxz_A           16 GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMREN-KNPNIVNYLDSYLVGDE   91 (297)
T ss_dssp             SCGGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTE
T ss_pred             CChhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc---HHHHHHHHHHHHhcC-CCCCCCeEeEEEEECCE
Confidence            44567999999999999999999999999999999999765433   246788999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|+|||||+||+|.+++... .+++..++.++.|++.||.|||++||+||||||+|||+   +.++.+||+|||++....
T Consensus        92 ~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~~  167 (297)
T 3fxz_A           92 LWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQIT  167 (297)
T ss_dssp             EEEEEECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECC
T ss_pred             EEEEEECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEE---CCCCCEEEeeCCCceecC
Confidence            99999999999999988764 69999999999999999999999999999999999999   567899999999988765


Q ss_pred             CCC-ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          237 PGE-QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       237 ~~~-~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      ... ......||+.|+|||++. ..|+.++|||||||++|+|++|..||...+.......+....... ......++..+
T Consensus       168 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  246 (297)
T 3fxz_A          168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPE-LQNPEKLSAIF  246 (297)
T ss_dssp             STTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCC-CSCGGGSCHHH
T ss_pred             CcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-CCCccccCHHH
Confidence            432 334568999999999986 468999999999999999999999999888776666554433221 12235689999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .+||.+||+.||.+|||+.|+|+||||+..
T Consensus       247 ~~li~~~l~~dp~~Rps~~ell~h~~~~~~  276 (297)
T 3fxz_A          247 RDFLNRCLEMDVEKRGSAKELLQHQFLKIA  276 (297)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             HHHHHHHccCChhHCcCHHHHhhChhhccc
Confidence            999999999999999999999999999864

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=9.5e-50  Score=410.54  Aligned_cols=259  Identities=36%  Similarity=0.634  Sum_probs=227.0

Q ss_pred             ccCeee--cceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           80 LDKYTF--GKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        80 ~~~y~~--~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ...|.+  .+.||+|+||.||+|.+..+|+.||+|++.....   ...+.+.+|+.+++++ +||||+++++++.+.+.+
T Consensus        86 ~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~  161 (373)
T 2x4f_A           86 NSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM---KDKEEVKNEISVMNQL-DHANLIQLYDAFESKNDI  161 (373)
T ss_dssp             GGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEE
T ss_pred             ccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc---ccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEE
Confidence            344555  6789999999999999999999999999976532   3356789999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      |||||||++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+.. +..+.+||+|||++....
T Consensus       162 ~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~-~~~~~~kl~DFG~a~~~~  240 (373)
T 2x4f_A          162 VLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN-RDAKQIKIIDFGLARRYK  240 (373)
T ss_dssp             EEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEE-TTTTEEEECCCSSCEECC
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEec-CCCCcEEEEeCCCceecC
Confidence            9999999999999988754 46999999999999999999999999999999999999953 245789999999999877


Q ss_pred             CCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          237 PGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      ........+||+.|+|||++. ..++.++|||||||++|+|++|..||.+.+.......+......++...++.++++++
T Consensus       241 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  320 (373)
T 2x4f_A          241 PREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAK  320 (373)
T ss_dssp             TTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHH
T ss_pred             CccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHH
Confidence            666566678999999999986 4688899999999999999999999999999999999988888777777788999999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      +||.+||..||.+|||+.|+|+||||+.
T Consensus       321 ~li~~~L~~dp~~Rps~~e~l~hp~~~~  348 (373)
T 2x4f_A          321 EFISKLLIKEKSWRISASEALKHPWLSD  348 (373)
T ss_dssp             HHHHTTSCSSGGGSCCHHHHHHSHHHHC
T ss_pred             HHHHHHcCCChhhCCCHHHHhcCcCcCC
Confidence            9999999999999999999999999985

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=5.4e-50  Score=399.18  Aligned_cols=248  Identities=21%  Similarity=0.275  Sum_probs=192.9

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC----
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD----  155 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~----  155 (586)
                      ..+|.+.+.||+|+||+||+|++  +|+.||||++.....    .......|+..+.++ +|||||++++++..++    
T Consensus         2 ar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~----~~~~~e~Ei~~~~~l-~HpNIv~l~g~~~~~~~~~~   74 (303)
T 3hmm_A            2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE----RSWFREAEIYQTVML-RHENILGFIAADNKDNGTWT   74 (303)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGH----HHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSE
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch----hhHHHHHHHHHHhcC-CCCCCCcEEEEEEecCCCce
Confidence            35799999999999999999976  689999999865421    112234566666778 8999999999998653    


Q ss_pred             eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc--------CceeccCCCCceEeecCCCCCceEEe
Q 043828          156 AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN--------GVMHRDLKPENFLFADGSENSQLKAI  227 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~ivHrDlkp~Nill~~~~~~~~vkl~  227 (586)
                      .+|||||||++|+|.+++... .+++..+..++.|++.||.|||++        +||||||||+|||+   +.++.+||+
T Consensus        75 ~~~lV~Ey~~~gsL~~~l~~~-~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl---~~~~~~Ki~  150 (303)
T 3hmm_A           75 QLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIA  150 (303)
T ss_dssp             EEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEE---CTTSCEEEC
T ss_pred             EEEEEecCCCCCcHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEE---CCCCCEEEE
Confidence            689999999999999999764 689999999999999999999987        99999999999999   678899999


Q ss_pred             ecccccccCCCCc-----eecccCCccccchhhhhc-------cCCCcchHHHHHHHHHHHhhCCCCCCC----------
Q 043828          228 DFGLSIFFKPGEQ-----FCEIVGSPYYMAPEVLRR-------NYGPEIDVWSAGVIIYILLCGVPPFWA----------  285 (586)
Q Consensus       228 Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~l~~-------~~~~~~DiwslG~il~~ll~g~~pf~~----------  285 (586)
                      |||+|+.......     ....+||+.|||||++.+       .|+.++|||||||+||||+||.+||..          
T Consensus       151 DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~  230 (303)
T 3hmm_A          151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD  230 (303)
T ss_dssp             CCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTT
T ss_pred             eCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchh
Confidence            9999987654332     224689999999999864       367789999999999999999776532          


Q ss_pred             -----CCHHHHHHHHHhCccCCCCCC-C--CCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          286 -----ETEEGIAHAIIRGKIDFERDP-W--PKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       286 -----~~~~~~~~~i~~~~~~~~~~~-~--~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                           .....+...+.......+.+. +  ...+..+.+|+.+||+.||++|||+.|+++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             TSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             cccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence                 122334444444433222211 1  1123568899999999999999999999863

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=1.2e-49  Score=416.17  Aligned_cols=264  Identities=26%  Similarity=0.455  Sum_probs=229.1

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++++.||+|+||+||+|++..+++.||+|++.+...........+.+|+.++..+ +||||++++++|.+.+.+|
T Consensus        72 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~  150 (437)
T 4aw2_A           72 HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DSKWITTLHYAFQDDNNLY  150 (437)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEE
T ss_pred             ChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCEEE
Confidence            347899999999999999999999999999999999764332222334578899999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          159 LVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      ||||||+||+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|.....
T Consensus       151 lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl---~~~g~vkL~DFGla~~~~~  227 (437)
T 4aw2_A          151 LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLME  227 (437)
T ss_dssp             EEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCT
T ss_pred             EEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeE---cCCCCEEEcchhhhhhccc
Confidence            99999999999999987 5789999999999999999999999999999999999999   6788999999999977654


Q ss_pred             CCce--ecccCCccccchhhhh------ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCC-CCC
Q 043828          238 GEQF--CEIVGSPYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD-PWP  308 (586)
Q Consensus       238 ~~~~--~~~~gt~~y~aPE~l~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~  308 (586)
                      ....  ...+||+.|+|||++.      +.|+.++|||||||++|+|++|.+||.+.+..+....+......+..+ .+.
T Consensus       228 ~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~  307 (437)
T 4aw2_A          228 DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVT  307 (437)
T ss_dssp             TSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCC
T ss_pred             CCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccc
Confidence            3322  3468999999999985      358999999999999999999999999999988888887644322222 235


Q ss_pred             CCCHHHHHHHHHccCCCCCC--CCCHHHHhcCCCccCCCC
Q 043828          309 KVSKEAKELVKNMLDPNPYN--RLTLEEVLENPWIKNDNH  346 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~--Rps~~eil~hp~~~~~~~  346 (586)
                      .+++++++||.+||..+|.+  ||+++|+++||||+....
T Consensus       308 ~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w  347 (437)
T 4aw2_A          308 DVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDW  347 (437)
T ss_dssp             CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCT
T ss_pred             cCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCH
Confidence            68999999999999998888  999999999999987543

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.3e-50  Score=410.25  Aligned_cols=258  Identities=33%  Similarity=0.588  Sum_probs=223.4

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ...++|++.+.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++.+ +||||+++++++.+...+
T Consensus         6 ~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~   84 (336)
T 3h4j_B            6 RHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-RHPHIIKLYDVITTPTDI   84 (336)
T ss_dssp             SEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEE
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhC-CCCCCCeEEEEEEeCCEE
Confidence            4567999999999999999999999999999999999765443333346789999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |+||||+ +|+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.....
T Consensus        85 ~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~DFG~s~~~~~  160 (336)
T 3h4j_B           85 VMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLL---DDNLNVKIADFGLSNIMTD  160 (336)
T ss_dssp             EEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEE---CTTCCEEECCSSCTBTTTT
T ss_pred             EEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEE---cCCCCEEEEEeccceeccC
Confidence            9999999 78999999888899999999999999999999999999999999999999   6678999999999988766


Q ss_pred             CCceecccCCccccchhhhhc-cC-CCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLRR-NY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~~-~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      .......+||+.|+|||++.+ .+ +.++|||||||++|+|++|..||.+.........+..+...+    ...+++.+.
T Consensus       161 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~----p~~~s~~~~  236 (336)
T 3h4j_B          161 GNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVM----PDFLSPGAQ  236 (336)
T ss_dssp             SBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCC----CTTSCHHHH
T ss_pred             CcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCC----cccCCHHHH
Confidence            666667789999999999875 33 779999999999999999999998765433322222222222    235789999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +||.+||..||.+|||+.|+++||||+..
T Consensus       237 ~li~~~L~~dP~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          237 SLIRRMIVADPMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             HHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             HHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence            99999999999999999999999999854

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=6.5e-49  Score=396.00  Aligned_cols=266  Identities=34%  Similarity=0.592  Sum_probs=223.9

Q ss_pred             CCcccCeeec-ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           77 GNILDKYTFG-KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        77 ~~~~~~y~~~-~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      +.+.+.|++. +.||+|+||.||+|.+..+++.||+|++....   ......+.+|+.++.++.+||||+++++++.+.+
T Consensus         8 ~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~   84 (316)
T 2ac3_A            8 GRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEED   84 (316)
T ss_dssp             CCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS---SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT
T ss_pred             cccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc---chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC
Confidence            4566789996 78999999999999999999999999997653   2235678999999999768999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      .+|+||||++|++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.+.....+||+|||++...
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~  164 (316)
T 2ac3_A           85 RFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI  164 (316)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred             EEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence            99999999999999999988888999999999999999999999999999999999999964433445999999998765


Q ss_pred             CCCC--------ceecccCCccccchhhhh------ccCCCcchHHHHHHHHHHHhhCCCCCCCCC--------------
Q 043828          236 KPGE--------QFCEIVGSPYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPFWAET--------------  287 (586)
Q Consensus       236 ~~~~--------~~~~~~gt~~y~aPE~l~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------------  287 (586)
                      ....        .....+||+.|+|||++.      ..++.++|||||||++|+|++|..||.+..              
T Consensus       165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~  244 (316)
T 2ac3_A          165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA  244 (316)
T ss_dssp             -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHH
T ss_pred             ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchh
Confidence            3211        123456999999999985      358899999999999999999999997654              


Q ss_pred             -HHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          288 -EEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       288 -~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                       ...+...+..+...++...+..++..+++||.+||..||.+|||+.|+|+||||+...
T Consensus       245 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~  303 (316)
T 2ac3_A          245 CQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCA  303 (316)
T ss_dssp             HHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred             HHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence             2446677777777766655667899999999999999999999999999999998643

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=1.5e-49  Score=401.77  Aligned_cols=263  Identities=35%  Similarity=0.675  Sum_probs=212.4

Q ss_pred             cccCeeec---ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           79 ILDKYTFG---KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        79 ~~~~y~~~---~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      +.++|.+.   +.||+|+||+||+|.+..+|+.||+|++.+.      ....+.+|+.+++.+.+||||+++++++.+..
T Consensus         6 f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~   79 (325)
T 3kn6_A            6 FYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQL   79 (325)
T ss_dssp             HHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             chhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Confidence            44677775   7899999999999999999999999999654      23567889999999966999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      .+|+|||||+||+|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+..++....+||+|||++...
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~  159 (325)
T 3kn6_A           80 HTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLK  159 (325)
T ss_dssp             EEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEEC
T ss_pred             EEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceec
Confidence            99999999999999999999889999999999999999999999999999999999999975444558999999999865


Q ss_pred             CCC-CceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCC-------HHHHHHHHHhCccCCCCCC
Q 043828          236 KPG-EQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAET-------EEGIAHAIIRGKIDFERDP  306 (586)
Q Consensus       236 ~~~-~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~~~~~~i~~~~~~~~~~~  306 (586)
                      ... ......+||+.|+|||++. ..|+.++|||||||++|+|++|..||....       ..+....+..+.+.++...
T Consensus       160 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  239 (325)
T 3kn6_A          160 PPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEA  239 (325)
T ss_dssp             CC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHH
T ss_pred             CCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCccc
Confidence            443 2334567899999999986 468999999999999999999999997643       3567777778877777766


Q ss_pred             CCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCCCC
Q 043828          307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHA  347 (586)
Q Consensus       307 ~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~~  347 (586)
                      |..+++++++||.+||..||.+|||+.++++||||+.....
T Consensus       240 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~~  280 (325)
T 3kn6_A          240 WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQL  280 (325)
T ss_dssp             HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCCC
T ss_pred             ccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCccC
Confidence            77899999999999999999999999999999999875443

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=9.4e-49  Score=395.71  Aligned_cols=266  Identities=37%  Similarity=0.665  Sum_probs=235.9

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCC---hhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT---EIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~---~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      .+.++|++++.||+|+||.||+|.+..+|+.||+|++.......   ....+.+.+|+.+++.+ +||||+++++++.+.
T Consensus         9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~   87 (321)
T 2a2a_A            9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-LHHNVITLHDVYENR   87 (321)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECS
T ss_pred             hhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhC-CCCCcceEEEEEecC
Confidence            45578999999999999999999999999999999998664332   12467899999999999 899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCC-CCCceEEeeccccc
Q 043828          155 DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSI  233 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~-~~~~vkl~Dfg~a~  233 (586)
                      ..+|+||||+++++|.+++.....+++..+..++.||+.||.|||++||+||||||+||++..+. ....+||+|||++.
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~  167 (321)
T 2a2a_A           88 TDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH  167 (321)
T ss_dssp             SEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence            99999999999999999998888899999999999999999999999999999999999995321 11279999999998


Q ss_pred             ccCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCH
Q 043828          234 FFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       234 ~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      ............||+.|+|||++. ..++.++|||||||++|+|++|..||.+.+.......+......++...+..++.
T Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  247 (321)
T 2a2a_A          168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSE  247 (321)
T ss_dssp             ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCH
T ss_pred             ecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCH
Confidence            876655556678999999999986 4689999999999999999999999999999888888888776665544567899


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .+.+||.+||..||.+|||+.++++||||+..
T Consensus       248 ~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~  279 (321)
T 2a2a_A          248 LAKDFIRKLLVKETRKRLTIQEALRHPWITPV  279 (321)
T ss_dssp             HHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCS
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhcCccccCC
Confidence            99999999999999999999999999999854

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.1e-49  Score=410.36  Aligned_cols=263  Identities=26%  Similarity=0.439  Sum_probs=226.5

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++++.||+|+||.||+|++..+|+.||+|++.+.........+.+.+|+.++..+ +||||+++++++++.+.+|
T Consensus        59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-~hp~Iv~l~~~~~~~~~~~  137 (412)
T 2vd5_A           59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-DRRWITQLHFAFQDENYLY  137 (412)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-CTTTBCCEEEEEECSSEEE
T ss_pred             ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeCCEEE
Confidence            357899999999999999999999999999999999765433333345678899999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          159 LVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      ||||||+||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++++||+|||++.....
T Consensus       138 lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl---d~~g~vkL~DFGla~~~~~  214 (412)
T 2vd5_A          138 LVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRA  214 (412)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCT
T ss_pred             EEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeee---cCCCCEEEeechhheeccC
Confidence            999999999999999874 479999999999999999999999999999999999999   6778999999999987654


Q ss_pred             CCce--ecccCCccccchhhhh--------ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCC-C
Q 043828          238 GEQF--CEIVGSPYYMAPEVLR--------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD-P  306 (586)
Q Consensus       238 ~~~~--~~~~gt~~y~aPE~l~--------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~  306 (586)
                      ....  ...+||+.|+|||++.        ..|+.++|||||||++|+|++|..||.+.+..+....+......+..+ .
T Consensus       215 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~  294 (412)
T 2vd5_A          215 DGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLV  294 (412)
T ss_dssp             TSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC--
T ss_pred             CCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCcc
Confidence            4332  3468999999999986        358999999999999999999999999999988888887643222222 1


Q ss_pred             CCCCCHHHHHHHHHccCCCCCCC---CCHHHHhcCCCccCCCC
Q 043828          307 WPKVSKEAKELVKNMLDPNPYNR---LTLEEVLENPWIKNDNH  346 (586)
Q Consensus       307 ~~~~~~~~~~li~~~L~~dp~~R---ps~~eil~hp~~~~~~~  346 (586)
                      ...+++++++||.+||. +|.+|   |+++|+++||||+....
T Consensus       295 ~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w  336 (412)
T 2vd5_A          295 DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDW  336 (412)
T ss_dssp             --CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCS
T ss_pred             ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCH
Confidence            24689999999999999 99998   59999999999987543

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=1.8e-48  Score=388.21  Aligned_cols=259  Identities=29%  Similarity=0.462  Sum_probs=217.3

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +++|++++.||+|+||+||+|.+..+|+.||+|++...... ......+.+|+.+++++ +||||+++++++.+.+.+|+
T Consensus         1 l~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l   78 (292)
T 3o0g_A            1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTL   78 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSS-TTHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEE
T ss_pred             CCCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCc-CCcchHHHHHHHHHhcC-CCCCEeeEEeEEEeCCEEEE
Confidence            36899999999999999999999999999999999866533 33346788999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      |||||++ +|.+.+. ..+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++......
T Consensus        79 v~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~---~~~~~~kl~Dfg~~~~~~~~  154 (292)
T 3o0g_A           79 VFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIP  154 (292)
T ss_dssp             EEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECCSC
T ss_pred             EEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEeecccceecCCc
Confidence            9999976 5555554 46789999999999999999999999999999999999999   66789999999999876432


Q ss_pred             -CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCC-CCCCCHHHHHHHHHhCccCCCCC---------
Q 043828          239 -EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPP-FWAETEEGIAHAIIRGKIDFERD---------  305 (586)
Q Consensus       239 -~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~p-f~~~~~~~~~~~i~~~~~~~~~~---------  305 (586)
                       .......||+.|+|||++.+  .++.++|||||||++|+|++|..| |.+.+.......+..........         
T Consensus       155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  234 (292)
T 3o0g_A          155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP  234 (292)
T ss_dssp             CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred             cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccc
Confidence             33445678999999999864  379999999999999999988777 55666666666655422211111         


Q ss_pred             ----------------CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          306 ----------------PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       306 ----------------~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                      ..+.++..+++||.+||+.||.+|||++|+|+||||+..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  289 (292)
T 3o0g_A          235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF  289 (292)
T ss_dssp             TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccC
Confidence                            123578999999999999999999999999999999863

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=4.8e-49  Score=415.87  Aligned_cols=259  Identities=35%  Similarity=0.626  Sum_probs=233.6

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ...++|.+++.||+|+||.||+|++..+|+.||+|++.+...........+.+|+.+++.+ +||||+++++++.+.+.+
T Consensus        13 ~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~HpnIv~l~~~~~~~~~~   91 (476)
T 2y94_A           13 VKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-RHPHIIKLYQVISTPSDI   91 (476)
T ss_dssp             CEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEE
T ss_pred             ceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEE
Confidence            3457899999999999999999999999999999999876543333457889999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |+|||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.....
T Consensus        92 ~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll---~~~~~vkL~DFG~a~~~~~  168 (476)
T 2y94_A           92 FMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSD  168 (476)
T ss_dssp             EEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEE---CTTCCEEECCCSSCEECCT
T ss_pred             EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEE---ecCCCeEEEeccchhhccc
Confidence            9999999999999999888889999999999999999999999999999999999999   6678999999999988766


Q ss_pred             CCceecccCCccccchhhhhcc--CCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~~~--~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      .......+||+.|+|||++.+.  ++.++|||||||++|+|++|..||.+.+.......+..+....+    ..+++.+.
T Consensus       169 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~  244 (476)
T 2y94_A          169 GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP----QYLNPSVI  244 (476)
T ss_dssp             TCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCC----TTCCHHHH
T ss_pred             cccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCC----ccCCHHHH
Confidence            6656677899999999999753  36789999999999999999999999888888888888765443    35789999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +||.+||..||.+|||+.++++||||+..
T Consensus       245 ~Li~~~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          245 SLLKHMLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             HHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence            99999999999999999999999999864

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=1.3e-48  Score=392.76  Aligned_cols=262  Identities=27%  Similarity=0.457  Sum_probs=215.6

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      ..+.++|++++.||+|+||+||+|++. +|+.||+|++...... ......+.+|+.+++++ +||||+++++++.+...
T Consensus        17 q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~   93 (311)
T 3niz_A           17 QGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAED-EGIPSTAIREISLLKEL-HHPNIVSLIDVIHSERC   93 (311)
T ss_dssp             ECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC-------CHHHHHHHHHHHHHHC-CCTTBCCEEEEECCSSC
T ss_pred             cchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEeccccc-chhhHHHHHHHHHHHHc-CCCCEeeeeeEEccCCE
Confidence            356789999999999999999999884 5899999999765322 22346788999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      +|+|||||++ +|.+.+... ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++...
T Consensus        94 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~a~~~  169 (311)
T 3niz_A           94 LTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI---NSDGALKLADFGLARAF  169 (311)
T ss_dssp             EEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEET
T ss_pred             EEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEE---CCCCCEEEccCcCceec
Confidence            9999999975 787777654 459999999999999999999999999999999999999   56789999999999876


Q ss_pred             CCC-CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCC------
Q 043828          236 KPG-EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP------  306 (586)
Q Consensus       236 ~~~-~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~------  306 (586)
                      ... .......||+.|+|||++.+  .++.++|||||||++|+|++|..||.+.+.......+...........      
T Consensus       170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  249 (311)
T 3niz_A          170 GIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQE  249 (311)
T ss_dssp             TSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTT
T ss_pred             CCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhc
Confidence            432 33445678999999999864  589999999999999999999999988776665555543211111111      


Q ss_pred             --------------------CCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          307 --------------------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       307 --------------------~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                                          .+.+++++.+||.+||+.||.+|||+.|+|+||||+...
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  308 (311)
T 3niz_A          250 LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD  308 (311)
T ss_dssp             SHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred             cchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence                                234678999999999999999999999999999998653

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=1.1e-48  Score=413.22  Aligned_cols=258  Identities=30%  Similarity=0.573  Sum_probs=222.0

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++++.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++.+ +||||+++++++...+.+|
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~l~~~~~~~~~~~  224 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLC  224 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCC-SCTTSCCEEEEEEETTEEE
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhC-CCCeEeeEEEEEeeCCEEE
Confidence            457899999999999999999999999999999999876544444456778899999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeecCCCCCceEEeecccccccC-
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-  236 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~-  236 (586)
                      ||||||+||+|.+++.....+++..+..++.||+.||.|||+ +||+||||||+|||+   +.++.+||+|||+|.... 
T Consensus       225 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~  301 (446)
T 4ejn_A          225 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIK  301 (446)
T ss_dssp             EEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEE---CSSSCEEECCCCCCCTTCC
T ss_pred             EEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEE---CCCCCEEEccCCCceeccC
Confidence            999999999999999888899999999999999999999998 999999999999999   567899999999998643 


Q ss_pred             CCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          237 PGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      ........+||+.|+|||++. ..|+.++|||||||++|+|++|..||.+.+.......+......++.    .+++.+.
T Consensus       302 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~----~~~~~~~  377 (446)
T 4ejn_A          302 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAK  377 (446)
T ss_dssp             -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT----TSCHHHH
T ss_pred             CCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCc----cCCHHHH
Confidence            233445678999999999986 46999999999999999999999999999999999988888776653    5789999


Q ss_pred             HHHHHccCCCCCCCC-----CHHHHhcCCCccCC
Q 043828          316 ELVKNMLDPNPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       316 ~li~~~L~~dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      +||.+||..||.+||     |++|+++||||+..
T Consensus       378 ~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          378 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             HHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence            999999999999999     99999999999864

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=3.3e-48  Score=389.40  Aligned_cols=263  Identities=25%  Similarity=0.379  Sum_probs=218.7

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCC--hhcHHHHHHHHHHHHhCC--CCCCeeEEEEEEEeC
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT--EIDIDDVRREVEIMRHLP--KHPNIVTYKEAYEDK  154 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~~~Ei~~l~~l~--~hpnIv~l~~~~~~~  154 (586)
                      +.++|++.+.||+|+||+||+|++..+|+.||+|++.......  ......+.+|+.+++.+.  +||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            4579999999999999999999999999999999997543211  112245677888887773  499999999999876


Q ss_pred             C-----eEEEEEeccCCCChHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEe
Q 043828          155 D-----AIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI  227 (586)
Q Consensus       155 ~-----~~~iv~E~~~gg~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~  227 (586)
                      .     .+++||||+. ++|.+++.....  +++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~---~~~~~~kl~  162 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV---TSGGTVKLA  162 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEE---CTTSCEEEC
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---cCCCCEEEe
Confidence            5     5899999996 599999887554  9999999999999999999999999999999999999   567899999


Q ss_pred             ecccccccCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCC
Q 043828          228 DFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP  306 (586)
Q Consensus       228 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  306 (586)
                      |||++.............||+.|+|||++. ..++.++|||||||++|+|++|.+||.+.+.......+.......+...
T Consensus       163 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  242 (308)
T 3g33_A          163 DFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD  242 (308)
T ss_dssp             SCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred             eCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence            999998776655566778999999999985 5689999999999999999999999999988887777665332222221


Q ss_pred             -----------------------CCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          307 -----------------------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       307 -----------------------~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                                             .+.++..+.+||.+||+.||.+|||+.|+|+||||+...
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~  304 (308)
T 3g33_A          243 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE  304 (308)
T ss_dssp             SCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred             ccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence                                   135789999999999999999999999999999998653

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=1.1e-48  Score=401.97  Aligned_cols=262  Identities=35%  Similarity=0.709  Sum_probs=235.5

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCC-----hhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-----EIDIDDVRREVEIMRHLPKHPNIVTYKEAYED  153 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~-----~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~  153 (586)
                      +.++|++.+.||.|+||.||+|++..+|+.||||++.......     ....+.+.+|+.+++++.+||||+++++++..
T Consensus        92 ~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  171 (365)
T 2y7j_A           92 FYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYES  171 (365)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEB
T ss_pred             hhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEee
Confidence            4468999999999999999999999899999999997653211     11245678999999998789999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          154 KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       154 ~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                      ....|+||||++|++|.+++.....+++..+..++.||+.||.|||+.||+||||||+||++   +.++.+||+|||++.
T Consensus       172 ~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~---~~~~~ikl~DfG~~~  248 (365)
T 2y7j_A          172 SSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL---DDNMQIRLSDFGFSC  248 (365)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCE
T ss_pred             CCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---CCCCCEEEEecCccc
Confidence            99999999999999999999888889999999999999999999999999999999999999   567899999999998


Q ss_pred             ccCCCCceecccCCccccchhhhhc-------cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCC
Q 043828          234 FFKPGEQFCEIVGSPYYMAPEVLRR-------NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP  306 (586)
Q Consensus       234 ~~~~~~~~~~~~gt~~y~aPE~l~~-------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  306 (586)
                      ...........+||+.|+|||++.+       .++.++|||||||++|+|++|..||...........+..+...++.+.
T Consensus       249 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  328 (365)
T 2y7j_A          249 HLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPE  328 (365)
T ss_dssp             ECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHH
T ss_pred             ccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcc
Confidence            8776666667889999999999853       478899999999999999999999999988888888888887777666


Q ss_pred             CCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          307 WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       307 ~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      |..++..+.+||.+||..||.+|||+.++|+||||+.
T Consensus       329 ~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          329 WDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             cccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence            7789999999999999999999999999999999973

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=1.9e-48  Score=394.73  Aligned_cols=266  Identities=28%  Similarity=0.456  Sum_probs=216.1

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ...++|++++.||+|+||+||+|++..+|+.||+|++...... ......+.+|+.+++++ +||||+++++++.+.+.+
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~  108 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEE-EGVPGTAIREVSLLKEL-QHRNIIELKSVIHHNHRL  108 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGC-CCTTBCCEEEEEEETTEE
T ss_pred             cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccc-cccchhHHHHHHHHHHc-CCCCcceEEEEEecCCEE
Confidence            4557999999999999999999999999999999999765432 22345677899999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecC--CCCCceEEeeccccccc
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADG--SENSQLKAIDFGLSIFF  235 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~--~~~~~vkl~Dfg~a~~~  235 (586)
                      |+||||++| +|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+...  +..+.+||+|||++...
T Consensus       109 ~lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~  187 (329)
T 3gbz_A          109 HLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF  187 (329)
T ss_dssp             EEEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred             EEEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence            999999975 999999988899999999999999999999999999999999999999532  24556999999999876


Q ss_pred             CCC-CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCC----
Q 043828          236 KPG-EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP----  308 (586)
Q Consensus       236 ~~~-~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~----  308 (586)
                      ... .......||+.|+|||++.+  .++.++|||||||++|+|++|..||.+.+.......+.......+...|+    
T Consensus       188 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (329)
T 3gbz_A          188 GIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTA  267 (329)
T ss_dssp             C-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGG
T ss_pred             CCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhh
Confidence            432 33445678999999999864  48999999999999999999999999988877777665432222211111    


Q ss_pred             ----------------------CCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCCC
Q 043828          309 ----------------------KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH  346 (586)
Q Consensus       309 ----------------------~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~  346 (586)
                                            .++.++.+||.+||+.||.+|||+.|+|+||||+....
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  327 (329)
T 3gbz_A          268 LPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDF  327 (329)
T ss_dssp             STTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSCS
T ss_pred             hhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCCC
Confidence                                  16789999999999999999999999999999997543

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=4.2e-48  Score=386.64  Aligned_cols=265  Identities=34%  Similarity=0.666  Sum_probs=237.3

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCC------hhcHHHHHHHHHHHHhCCCCCCeeEEEEE
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT------EIDIDDVRREVEIMRHLPKHPNIVTYKEA  150 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~------~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~  150 (586)
                      ..+.++|++.+.||+|+||.||+|.+..+|+.||+|++.......      ....+.+.+|+.+++++.+||||++++++
T Consensus        13 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~   92 (298)
T 1phk_A           13 HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT   92 (298)
T ss_dssp             --CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred             cchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee
Confidence            345689999999999999999999999999999999997653211      12245678999999999669999999999


Q ss_pred             EEeCCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecc
Q 043828          151 YEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG  230 (586)
Q Consensus       151 ~~~~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg  230 (586)
                      +.....+|+||||+++++|.+++.....+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|||
T Consensus        93 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg  169 (298)
T 1phk_A           93 YETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFG  169 (298)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCT
T ss_pred             eccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE---cCCCcEEEeccc
Confidence            99999999999999999999999988889999999999999999999999999999999999999   567889999999


Q ss_pred             cccccCCCCceecccCCccccchhhhh-------ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCC
Q 043828          231 LSIFFKPGEQFCEIVGSPYYMAPEVLR-------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE  303 (586)
Q Consensus       231 ~a~~~~~~~~~~~~~gt~~y~aPE~l~-------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~  303 (586)
                      ++.............||+.|+|||++.       ..++.++|||||||++|+|++|..||...+.......+..+...++
T Consensus       170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  249 (298)
T 1phk_A          170 FSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFG  249 (298)
T ss_dssp             TCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC
T ss_pred             chhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccC
Confidence            998876665566678999999999984       2478899999999999999999999999998888888888888877


Q ss_pred             CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       304 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .+.++.++..+.+||.+||..||.+|||+.++|+||||+..
T Consensus       250 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (298)
T 1phk_A          250 SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY  290 (298)
T ss_dssp             TTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             cccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhc
Confidence            77777899999999999999999999999999999999864

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=2.8e-48  Score=393.19  Aligned_cols=267  Identities=30%  Similarity=0.544  Sum_probs=233.4

Q ss_pred             CcccCeeec-ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           78 NILDKYTFG-KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        78 ~~~~~y~~~-~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      .+.++|.+. +.||+|+||.||+|++..+|+.||+|++...... ......+.+|+.+++.+..||||+++++++.+.+.
T Consensus        25 ~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~  103 (327)
T 3lm5_A           25 NFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG-QDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE  103 (327)
T ss_dssp             HHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETT-EECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred             hhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc-hHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence            445678888 8899999999999999999999999999865432 33457889999999999778999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          157 IYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      +|+|||||++|+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.....+.+||+|||++..
T Consensus       104 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~  183 (327)
T 3lm5_A          104 IILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK  183 (327)
T ss_dssp             EEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEE
T ss_pred             EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccc
Confidence            99999999999999988553  6799999999999999999999999999999999999995433468999999999988


Q ss_pred             cCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          235 FKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       235 ~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ...........||+.|+|||++. ..++.++|||||||++|+|++|..||...+.......+......++...+..+++.
T Consensus       184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  263 (327)
T 3lm5_A          184 IGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQL  263 (327)
T ss_dssp             C---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHH
T ss_pred             cCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHH
Confidence            76555556678999999999987 46899999999999999999999999999999888888888888888778889999


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      +.+||.+||..||.+|||++++|+||||+...
T Consensus       264 ~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~  295 (327)
T 3lm5_A          264 ATDFIQSLLVKNPEKRPTAEICLSHSWLQQWD  295 (327)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCC
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhCCHhhcccc
Confidence            99999999999999999999999999998754

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=3.5e-48  Score=385.34  Aligned_cols=258  Identities=30%  Similarity=0.467  Sum_probs=214.3

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +++|++++.||+|+||+||+|.+ .+|+.||+|++...... ......+.+|+.+++.+ +||||+++++++.+.+.+|+
T Consensus         1 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l   77 (288)
T 1ob3_A            1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKED-EGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVL   77 (288)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGG-GCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEE
T ss_pred             CccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccc-cccchhHHHHHHHHHhc-CCCCEeeeeeEEccCCeEEE
Confidence            36899999999999999999988 67899999999765422 22236788999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||+++ +|.+++... +.+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++......
T Consensus        78 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~  153 (288)
T 1ob3_A           78 VFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIP  153 (288)
T ss_dssp             EEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCTTHHHHHCC-
T ss_pred             EEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEEeECccccccCcc
Confidence            9999975 898888763 679999999999999999999999999999999999999   66789999999999876432


Q ss_pred             -CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCC-----------
Q 043828          239 -EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER-----------  304 (586)
Q Consensus       239 -~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~-----------  304 (586)
                       .......||+.|+|||++.+  .++.++|||||||++|+|++|..||.+.+.......+.+.......           
T Consensus       154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (288)
T 1ob3_A          154 VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK  233 (288)
T ss_dssp             --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred             ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccc
Confidence             23345678999999999864  5899999999999999999999999998877766665442111100           


Q ss_pred             --------------CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          305 --------------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       305 --------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                    ..+..+++.+.+||.+||+.||.+|||+.|+|+||||+..
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  287 (288)
T 1ob3_A          234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN  287 (288)
T ss_dssp             CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred             cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence                          0123578999999999999999999999999999999853

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=4.3e-48  Score=391.60  Aligned_cols=257  Identities=30%  Similarity=0.539  Sum_probs=217.9

Q ss_pred             ccCeeecceeccCCceEEEEEEEc---cCCcEEEEEEeeccccCC-hhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEI---ETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~~avK~i~~~~~~~-~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      .++|++.+.||+|+||.||+|++.   .+|+.||+|++.+..... ......+.+|+.+++.+ +||||+++++++...+
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~   94 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-KHPFIVDLIYAFQTGG   94 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHC-CCTTBCCEEEEEECSS
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-CCCCccceeEEEEcCC
Confidence            468999999999999999999885   689999999997654322 22345678899999999 8999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      .+|+|||||+|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++...
T Consensus        95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill---~~~~~~kl~Dfg~~~~~  171 (327)
T 3a62_A           95 KLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML---NHQGHVKLTDFGLCKES  171 (327)
T ss_dssp             CEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE---CTTSCEEECCCSCC---
T ss_pred             EEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEE---CCCCcEEEEeCCccccc
Confidence            999999999999999999888889999999999999999999999999999999999999   56789999999998764


Q ss_pred             CC-CCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          236 KP-GEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       236 ~~-~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      .. .......+||+.|+|||++. ..++.++|||||||++|+|++|..||.+.+.......+......++    +.++..
T Consensus       172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~~  247 (327)
T 3a62_A          172 IHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQE  247 (327)
T ss_dssp             -------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC----TTSCHH
T ss_pred             ccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCHH
Confidence            32 23344568999999999986 4689999999999999999999999999999888888888766554    358899


Q ss_pred             HHHHHHHccCCCCCCCC-----CHHHHhcCCCccCC
Q 043828          314 AKELVKNMLDPNPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      +++||.+||..||.+||     ++.++++||||+..
T Consensus       248 ~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          248 ARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             HHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred             HHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence            99999999999999999     89999999999864

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=2e-48  Score=386.80  Aligned_cols=266  Identities=40%  Similarity=0.748  Sum_probs=240.4

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      +.+.++|++++.||+|+||.||+|.+..+++.||+|++...... ......+.+|+.+++++ +||||+++++++.+...
T Consensus        18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   95 (287)
T 2wei_A           18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKL-DHPNIMKLFEILEDSSS   95 (287)
T ss_dssp             HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS-SSCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSE
T ss_pred             HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc-hHHHHHHHHHHHHHHhc-cCCCccEEEEEEeCCCe
Confidence            45567999999999999999999999999999999999765433 33457889999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|+||||+++++|.+++.....+++..++.++.||+.||.|||++||+||||||+||+++.......+||+|||++....
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~  175 (287)
T 2wei_A           96 FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (287)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred             EEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence            99999999999999999888889999999999999999999999999999999999999654455689999999998776


Q ss_pred             CCCceecccCCccccchhhhhccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          237 PGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      .........||+.|+|||++.+.++.++||||||+++|+|++|..||.+.+.......+..+...++.+.+..++..+.+
T Consensus       176 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (287)
T 2wei_A          176 QNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKD  255 (287)
T ss_dssp             CCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHH
T ss_pred             CCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHH
Confidence            55555556789999999999888999999999999999999999999999998888888888877776667789999999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ||.+||..||.+|||+.++|+||||+..
T Consensus       256 li~~~l~~dp~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          256 LIRKMLTFHPSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred             HHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence            9999999999999999999999999753

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=3e-48  Score=387.74  Aligned_cols=257  Identities=32%  Similarity=0.615  Sum_probs=218.8

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCC-----------------------hhcHHHHHHHHHHH
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-----------------------EIDIDDVRREVEIM  135 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~-----------------------~~~~~~~~~Ei~~l  135 (586)
                      ..++|++.+.||+|+||.||+|++..+|+.||+|++.+.....                       ....+.+.+|+.++
T Consensus        11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   90 (298)
T 2zv2_A           11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL   90 (298)
T ss_dssp             EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred             eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence            3478999999999999999999999999999999997654321                       11235688999999


Q ss_pred             HhCCCCCCeeEEEEEEEe--CCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCce
Q 043828          136 RHLPKHPNIVTYKEAYED--KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENF  213 (586)
Q Consensus       136 ~~l~~hpnIv~l~~~~~~--~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Ni  213 (586)
                      +++ +||||+++++++.+  ...+|+||||+++++|.+++ ....+++..+..++.||+.||.|||++||+||||||+||
T Consensus        91 ~~l-~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Ni  168 (298)
T 2zv2_A           91 KKL-DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNL  168 (298)
T ss_dssp             HTC-CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS-CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred             HhC-CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHE
Confidence            999 89999999999987  57899999999999998754 345799999999999999999999999999999999999


Q ss_pred             EeecCCCCCceEEeecccccccCCCC-ceecccCCccccchhhhhcc----CCCcchHHHHHHHHHHHhhCCCCCCCCCH
Q 043828          214 LFADGSENSQLKAIDFGLSIFFKPGE-QFCEIVGSPYYMAPEVLRRN----YGPEIDVWSAGVIIYILLCGVPPFWAETE  288 (586)
Q Consensus       214 ll~~~~~~~~vkl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~l~~~----~~~~~DiwslG~il~~ll~g~~pf~~~~~  288 (586)
                      |+   +.++.+||+|||++....... ......||+.|+|||++.+.    ++.++|||||||++|+|++|..||.....
T Consensus       169 l~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~  245 (298)
T 2zv2_A          169 LV---GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI  245 (298)
T ss_dssp             EE---CTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             EE---CCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence            99   567899999999998765433 33456899999999998643    36789999999999999999999999888


Q ss_pred             HHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCcc
Q 043828          289 EGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK  342 (586)
Q Consensus       289 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~  342 (586)
                      ......+......++.  .+.+++.+.+||.+||+.||.+|||+.|+++||||+
T Consensus       246 ~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          246 MCLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             HHHHHHHHHCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             HHHHHHHhcccCCCCC--ccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence            8887777777665543  357899999999999999999999999999999996

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=9.3e-49  Score=419.07  Aligned_cols=258  Identities=30%  Similarity=0.509  Sum_probs=229.0

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++.+.||+|+||.||+|++..+|+.||+|++.+...........+.+|+.+|+.+ +||||+++++++++.+.+|
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l~  260 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALC  260 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-CCCCEeeEEEEEeeCCEEE
Confidence            346899999999999999999999999999999999876544444457788999999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          159 LVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|||||+||+|.+++...+  .+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++....
T Consensus       261 lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILl---d~~g~vKL~DFGla~~~~  337 (576)
T 2acx_A          261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVP  337 (576)
T ss_dssp             EEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTCEECC
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEE---eCCCCeEEEecccceecc
Confidence            9999999999999987654  49999999999999999999999999999999999999   677899999999998877


Q ss_pred             CCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCC----CHHHHHHHHHhCccCCCCCCCCCCC
Q 043828          237 PGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDPWPKVS  311 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~----~~~~~~~~i~~~~~~~~~~~~~~~~  311 (586)
                      ........+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||...    ....+...+......++    ..++
T Consensus       338 ~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p----~~~s  413 (576)
T 2acx_A          338 EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS----ERFS  413 (576)
T ss_dssp             TTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCC----TTSC
T ss_pred             cCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCC----ccCC
Confidence            6666667799999999999974 6899999999999999999999999875    34556666666554443    4689


Q ss_pred             HHHHHHHHHccCCCCCCCC-----CHHHHhcCCCccCC
Q 043828          312 KEAKELVKNMLDPNPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       312 ~~~~~li~~~L~~dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      +++++||.+||..||.+||     +++|+++||||+..
T Consensus       414 ~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i  451 (576)
T 2acx_A          414 PQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL  451 (576)
T ss_dssp             HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence            9999999999999999999     89999999999864

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=2.1e-48  Score=393.03  Aligned_cols=259  Identities=28%  Similarity=0.522  Sum_probs=218.9

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .+.++|++++.||+|+||+||+|++..+++.||+|++.......  ..+.+.+|+.+++.+ +||||+++++++.+.+..
T Consensus         4 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~   80 (323)
T 3tki_A            4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKML-NHENVVKFYGHRREGNIQ   80 (323)
T ss_dssp             TTTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred             cHhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccc--hHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeE
Confidence            45689999999999999999999999999999999997554322  235688999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |+|||||+||+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+   +..+.+||+|||++.....
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~~~  157 (323)
T 3tki_A           81 YLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRY  157 (323)
T ss_dssp             EEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEECEE
T ss_pred             EEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEE---eCCCCEEEEEeeccceecc
Confidence            9999999999999999888889999999999999999999999999999999999999   5678999999999976532


Q ss_pred             CC---ceecccCCccccchhhhhc-c-CCCcchHHHHHHHHHHHhhCCCCCCCCCHHH-HHHHHHhCccCCCCCCCCCCC
Q 043828          238 GE---QFCEIVGSPYYMAPEVLRR-N-YGPEIDVWSAGVIIYILLCGVPPFWAETEEG-IAHAIIRGKIDFERDPWPKVS  311 (586)
Q Consensus       238 ~~---~~~~~~gt~~y~aPE~l~~-~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~  311 (586)
                      ..   .....+||+.|+|||++.+ . ++.++|||||||++|+|++|..||....... ..........  ...++..++
T Consensus       158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~  235 (323)
T 3tki_A          158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNPWKKID  235 (323)
T ss_dssp             TTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT--TSTTGGGSC
T ss_pred             CCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc--cCCccccCC
Confidence            22   2335689999999999864 3 4778999999999999999999998765432 2222232222  223456789


Q ss_pred             HHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       312 ~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ..+.+||.+||..||.+|||+.|+++||||+..
T Consensus       236 ~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~  268 (323)
T 3tki_A          236 SAPLALLHKILVENPSARITIPDIKKDRWYNKP  268 (323)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhhChhhccc
Confidence            999999999999999999999999999999864

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=2.7e-48  Score=411.77  Aligned_cols=262  Identities=30%  Similarity=0.445  Sum_probs=201.3

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe----
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED----  153 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~----  153 (586)
                      .+.++|++++.||+|+||+||+|++..+|+.||+|++.+.. ......+.+.+|+.+|+.+ +|||||++++++..    
T Consensus        50 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~  127 (458)
T 3rp9_A           50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF-EDLIDCKRILREIAILNRL-NHDHVVKVLDIVIPKDVE  127 (458)
T ss_dssp             CSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTT-SSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTT
T ss_pred             ccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh-cCHHHHHHHHHHHHHHHhC-CCCCCCceEEEEecCCcc
Confidence            45679999999999999999999999999999999996542 3444567889999999999 89999999999843    


Q ss_pred             -CCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          154 -KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       154 -~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                       ...+|+||||+ +++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|
T Consensus       128 ~~~~~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl---~~~~~~kl~DFGla  203 (458)
T 3rp9_A          128 KFDELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLV---NQDCSVKVCDFGLA  203 (458)
T ss_dssp             TCCCEEEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTCCEEECCCTTC
T ss_pred             cCceEEEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEE---CCCCCEeecccccc
Confidence             35799999998 57999999888889999999999999999999999999999999999999   67789999999999


Q ss_pred             cccCCC----------------------------CceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhh----
Q 043828          233 IFFKPG----------------------------EQFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLC----  278 (586)
Q Consensus       233 ~~~~~~----------------------------~~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~----  278 (586)
                      +.....                            ......+||+.|+|||++.  ..|+.++|||||||++|+|++    
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~  283 (458)
T 3rp9_A          204 RTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKE  283 (458)
T ss_dssp             BCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTT
T ss_pred             hhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccc
Confidence            865421                            1234568899999999863  469999999999999999998    


Q ss_pred             -------CCCCCCCCCH--------------------HHHHHHHHhC--c------------------cCCC-------C
Q 043828          279 -------GVPPFWAETE--------------------EGIAHAIIRG--K------------------IDFE-------R  304 (586)
Q Consensus       279 -------g~~pf~~~~~--------------------~~~~~~i~~~--~------------------~~~~-------~  304 (586)
                             |.+||.+.+.                    ...+..+...  .                  ..++       .
T Consensus       284 ~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (458)
T 3rp9_A          284 NVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLA  363 (458)
T ss_dssp             TCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGG
T ss_pred             cccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHH
Confidence                   6777765431                    1111111110  0                  0000       1


Q ss_pred             CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          305 DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       305 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      ..++.+++++.+||.+||..||.+|||++|+|+||||+...
T Consensus       364 ~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~  404 (458)
T 3rp9_A          364 ERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVR  404 (458)
T ss_dssp             GGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             HHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcC
Confidence            12456799999999999999999999999999999998753

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=3.7e-48  Score=383.28  Aligned_cols=259  Identities=32%  Similarity=0.581  Sum_probs=227.8

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++++.||+|+||.||+|.+..++..||+|++.+...........+.+|+.+++++ +||||+++++++.+...++
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   85 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVY   85 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcC-CCCCCcchhheEecCCEEE
Confidence            457899999999999999999999999999999999766544444457789999999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      +||||+++++|.+++.....+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++......
T Consensus        86 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili---~~~~~~~l~Dfg~~~~~~~~  162 (279)
T 3fdn_A           86 LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAPSS  162 (279)
T ss_dssp             EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEE---CTTSCEEECSCCEESCC---
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEE---cCCCCEEEEeccccccCCcc
Confidence            999999999999999888889999999999999999999999999999999999999   67789999999998654332


Q ss_pred             CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          239 EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                       ......||+.|+|||++.+ .++.++||||||+++|+|++|..||...+.......+......++    ..++..+.+|
T Consensus       163 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l  237 (279)
T 3fdn_A          163 -RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDL  237 (279)
T ss_dssp             ------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC----TTSCHHHHHH
T ss_pred             -cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCC----CcCCHHHHHH
Confidence             2345679999999999874 578899999999999999999999999998888888887766554    3578999999


Q ss_pred             HHHccCCCCCCCCCHHHHhcCCCccCCCC
Q 043828          318 VKNMLDPNPYNRLTLEEVLENPWIKNDNH  346 (586)
Q Consensus       318 i~~~L~~dp~~Rps~~eil~hp~~~~~~~  346 (586)
                      |.+||+.||.+|||+.|+++||||+....
T Consensus       238 i~~~l~~~p~~Rps~~e~l~h~~~~~~~~  266 (279)
T 3fdn_A          238 ISRLLKHNPSQRPMLREVLEHPWITANSS  266 (279)
T ss_dssp             HHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred             HHHHhccChhhCCCHHHHhhCccccCCcc
Confidence            99999999999999999999999986443

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=4.8e-48  Score=389.66  Aligned_cols=259  Identities=27%  Similarity=0.428  Sum_probs=206.9

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++++.||+|+||.||+|.+..+|+.||+|++.....  ......+.+|+.+++++ +||||+++++++.+++.+|+
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~l   80 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE--EGTPSTAIREISLMKEL-KHENIVRLYDVIHTENKLTL   80 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCST--TCSCHHHHHHHHHHTTC-CBTTBCCEEEEECCTTEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc--cccHHHHHHHHHHHHhc-CCCCcceEEEEEEECCeEEE
Confidence            3589999999999999999999999999999999976542  22336788999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          160 VMELCEGGELFDRIVNK------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                      ||||++ |+|.+++...      ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.
T Consensus        81 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~~~  156 (317)
T 2pmi_A           81 VFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLI---NKRGQLKLGDFGLAR  156 (317)
T ss_dssp             EEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCSSCE
T ss_pred             EEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEE---cCCCCEEECcCccce
Confidence            999997 5999888653      358999999999999999999999999999999999999   567899999999998


Q ss_pred             ccCCC-CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCC-----
Q 043828          234 FFKPG-EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD-----  305 (586)
Q Consensus       234 ~~~~~-~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~-----  305 (586)
                      ..... .......||+.|+|||++.+  .++.++|||||||++|+|++|..||.+.+.......+.......+..     
T Consensus       157 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  236 (317)
T 2pmi_A          157 AFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV  236 (317)
T ss_dssp             ETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGG
T ss_pred             ecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhh
Confidence            76432 23345679999999999864  58999999999999999999999999988887776665421111100     


Q ss_pred             -------------------------CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          306 -------------------------PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       306 -------------------------~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                                               ....++..+.+||.+||+.||.+|||+.|+|+||||+...
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  301 (317)
T 2pmi_A          237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYY  301 (317)
T ss_dssp             GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred             hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhccc
Confidence                                     1125788999999999999999999999999999998643

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.8e-48  Score=392.69  Aligned_cols=260  Identities=27%  Similarity=0.435  Sum_probs=212.9

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +++|++++.||+|+||+||+|.+..+++.||+|++........  ...+.+|+.+++.+ +||||+++++++.+.+.+|+
T Consensus         1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l   77 (324)
T 3mtl_A            1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGA--PCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTL   77 (324)
T ss_dssp             CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCC-CCTTBCCEEEEEECSSCEEE
T ss_pred             CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccccc--chhHHHHHHHHHhc-CCCCCCeeeeEEeeCCEEEE
Confidence            3689999999999999999999999999999999865432211  11345799999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||++ |+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++......
T Consensus        78 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~a~~~~~~  153 (324)
T 3mtl_A           78 VFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIP  153 (324)
T ss_dssp             EEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEE---CTTCCEEECSSSEEECC---
T ss_pred             Eecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEE---CCCCCEEEccCcccccccCC
Confidence            999997 5888888764 459999999999999999999999999999999999999   56789999999999765432


Q ss_pred             -CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCC--------
Q 043828          239 -EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW--------  307 (586)
Q Consensus       239 -~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~--------  307 (586)
                       .......||+.|+|||++.+  .++.++|||||||++|+|++|..||.+.+..+....+.+.........|        
T Consensus       154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  233 (324)
T 3mtl_A          154 TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE  233 (324)
T ss_dssp             ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred             ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchh
Confidence             23345678999999999864  5899999999999999999999999999888877776653322222222        


Q ss_pred             ------------------CCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCCC
Q 043828          308 ------------------PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH  346 (586)
Q Consensus       308 ------------------~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~  346 (586)
                                        +.+++.+.+||.+||+.||.+|||++|+|+||||.....
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE  290 (324)
T ss_dssp             HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCS
T ss_pred             hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccc
Confidence                              356889999999999999999999999999999987543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=5.1e-48  Score=387.26  Aligned_cols=262  Identities=42%  Similarity=0.739  Sum_probs=233.8

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .+.++|.+.+.||+|+||.||+|.+..+|+.||+|++......   ....+.+|+.+++.+ +||||+++++++.+...+
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   81 (304)
T 2jam_A            6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF---RDSSLENEIAVLKKI-KHENIVTLEDIYESTTHY   81 (304)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred             chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccccc---chHHHHHHHHHHHhC-CCCCeeehhhhcccCCEE
Confidence            4567899999999999999999999999999999999764322   235688999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |+||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++...+..+.+||+|||++.....
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~  161 (304)
T 2jam_A           82 YLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN  161 (304)
T ss_dssp             EEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred             EEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence            99999999999999998888899999999999999999999999999999999999996545678999999999876433


Q ss_pred             CCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      . ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...+.......+..+...++.+.++.++..+.+
T Consensus       162 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  240 (304)
T 2jam_A          162 G-IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKD  240 (304)
T ss_dssp             B-TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHH
T ss_pred             C-ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHH
Confidence            2 2344579999999999864 6889999999999999999999999999999999999998888877777889999999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ||.+||..||.+|||+.++|+||||+..
T Consensus       241 li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          241 FICHLLEKDPNERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             HHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred             HHHHHcCCChhHCcCHHHHhcCccccCC
Confidence            9999999999999999999999999864

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.5e-48  Score=402.00  Aligned_cols=261  Identities=30%  Similarity=0.502  Sum_probs=210.7

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC--
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD--  155 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~--  155 (586)
                      .+.++|++++.||+|+||.||+|.+..+|+.||+|++.+.. ........+.+|+.+++.+.+||||+++++++...+  
T Consensus         6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~   84 (388)
T 3oz6_A            6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF-QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR   84 (388)
T ss_dssp             HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS
T ss_pred             cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccc-cChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC
Confidence            35679999999999999999999999999999999986542 334456778899999999966999999999998654  


Q ss_pred             eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      .+|+|||||+ ++|..++.. ..+++..+..++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||+|+..
T Consensus        85 ~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~  159 (388)
T 3oz6_A           85 DVYLVFDYME-TDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILL---NAECHVKVADFGLSRSF  159 (388)
T ss_dssp             CEEEEEECCS-EEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEES
T ss_pred             EEEEEecccC-cCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEE---cCCCCEEecCCcccccc
Confidence            7999999997 589888876 579999999999999999999999999999999999999   67789999999999765


Q ss_pred             CC----------------------CCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHH
Q 043828          236 KP----------------------GEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGI  291 (586)
Q Consensus       236 ~~----------------------~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~  291 (586)
                      ..                      .......+||+.|+|||++.+  .|+.++|||||||++|+|++|.+||.+.+....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~  239 (388)
T 3oz6_A          160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ  239 (388)
T ss_dssp             SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            32                      112344689999999999864  689999999999999999999999999888777


Q ss_pred             HHHHHhCccCCC-------------------------------------------CCCCCCCCHHHHHHHHHccCCCCCC
Q 043828          292 AHAIIRGKIDFE-------------------------------------------RDPWPKVSKEAKELVKNMLDPNPYN  328 (586)
Q Consensus       292 ~~~i~~~~~~~~-------------------------------------------~~~~~~~~~~~~~li~~~L~~dp~~  328 (586)
                      ...+........                                           ..+...+++++.+||.+||..||.+
T Consensus       240 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~  319 (388)
T 3oz6_A          240 LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNK  319 (388)
T ss_dssp             HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGG
T ss_pred             HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCccc
Confidence            766653111000                                           0012267899999999999999999


Q ss_pred             CCCHHHHhcCCCccCC
Q 043828          329 RLTLEEVLENPWIKND  344 (586)
Q Consensus       329 Rps~~eil~hp~~~~~  344 (586)
                      |||++|+|+||||+..
T Consensus       320 R~t~~e~l~Hp~~~~~  335 (388)
T 3oz6_A          320 RISANDALKHPFVSIF  335 (388)
T ss_dssp             SCCHHHHTTSTTTTTT
T ss_pred             CCCHHHHhCCHHHHHh
Confidence            9999999999999764

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=1.6e-48  Score=407.92  Aligned_cols=264  Identities=37%  Similarity=0.661  Sum_probs=219.2

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCC-----hhcHHHHHHHHHHHHhCCCCCCeeEEEEEEE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-----EIDIDDVRREVEIMRHLPKHPNIVTYKEAYE  152 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~-----~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~  152 (586)
                      .+.++|.+.+.||+|+||.||+|.+..+++.||+|++.+.....     ......+.+|+.+|+++ +||||+++++++.
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~  210 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFD  210 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-CCTTBCCCCEEEE
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-CCCCEeeEEEEEe
Confidence            45678999999999999999999999999999999998764321     11223578999999999 9999999999986


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          153 DKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       153 ~~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                      . ..+|+|||||++|+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++..+....+||+|||++
T Consensus       211 ~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a  289 (419)
T 3i6u_A          211 A-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS  289 (419)
T ss_dssp             S-SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred             c-CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccc
Confidence            4 568999999999999999988889999999999999999999999999999999999999965445567999999999


Q ss_pred             cccCCCCceecccCCccccchhhhh----ccCCCcchHHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHhCccCCCCCCC
Q 043828          233 IFFKPGEQFCEIVGSPYYMAPEVLR----RNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAIIRGKIDFERDPW  307 (586)
Q Consensus       233 ~~~~~~~~~~~~~gt~~y~aPE~l~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~  307 (586)
                      ............+||+.|+|||++.    ..|+.++|||||||++|+|++|.+||..... ......+..+...+....|
T Consensus       290 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~  369 (419)
T 3i6u_A          290 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW  369 (419)
T ss_dssp             TSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHH
T ss_pred             eecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhh
Confidence            8876555556678999999999984    3578899999999999999999999976433 3445566666666655556


Q ss_pred             CCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       308 ~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      ..++..+.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       370 ~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~  405 (419)
T 3i6u_A          370 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  405 (419)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             cccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCC
Confidence            789999999999999999999999999999999985

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=6.9e-48  Score=382.10  Aligned_cols=263  Identities=39%  Similarity=0.716  Sum_probs=229.1

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCC---hhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT---EIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~---~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      .++|++++.||+|+||.||+|.+..+|+.||+|++.......   ....+.+.+|+.+++++ +||||+++++++.+...
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~   82 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-RHPNIITLHDIFENKTD   82 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSE
T ss_pred             hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-CCCCeeehhheecCCCe
Confidence            367999999999999999999999999999999998764432   22467899999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCC-CCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~-~~~~vkl~Dfg~a~~~  235 (586)
                      +|+||||+++++|.+++.....+++..+..++.||+.||.|||++||+||||||+||++.... ....+||+|||++...
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~  162 (283)
T 3bhy_A           83 VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI  162 (283)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred             EEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence            999999999999999998888899999999999999999999999999999999999995321 2348999999999877


Q ss_pred             CCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          236 KPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       236 ~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      ..........||+.|+|||++. ..++.++||||||+++|+|++|..||...+.......+......++...++.++..+
T Consensus       163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (283)
T 3bhy_A          163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELA  242 (283)
T ss_dssp             C--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHH
T ss_pred             cCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHH
Confidence            6555555677999999999986 468999999999999999999999999999888888888777666554456789999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      .+||.+||..||.+|||+.++++||||+.
T Consensus       243 ~~li~~~l~~dp~~Rps~~~~l~h~~~~~  271 (283)
T 3bhy_A          243 KDFIRRLLVKDPKRRMTIAQSLEHSWIKA  271 (283)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHHCHHHHH
T ss_pred             HHHHHHHccCCHhHCcCHHHHHhCHHHHH
Confidence            99999999999999999999999999975

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.4e-47  Score=385.29  Aligned_cols=261  Identities=29%  Similarity=0.527  Sum_probs=217.6

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++++.||+|+||+||+|.+..+|+.||+|++..... .....+.+.+|+.+++++ +||||+++++++...+.+++
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~l   79 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED-DPVIKKIALREIRMLKQL-KHPNLVNLLEVFRRKRRLHL   79 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC--HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHhC-CCCCccchhheeecCCeEEE
Confidence            5789999999999999999999999999999999866532 233356788999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC-
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-  238 (586)
                      ||||+++++|..++.....+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||++...... 
T Consensus        80 v~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~~  156 (311)
T 4agu_A           80 VFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILI---TKHSVIKLCDFGFARLLTGPS  156 (311)
T ss_dssp             EEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECC---
T ss_pred             EEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEE---cCCCCEEEeeCCCchhccCcc
Confidence            99999999999988888889999999999999999999999999999999999999   56789999999999876532 


Q ss_pred             CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc----------------
Q 043828          239 EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI----------------  300 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~----------------  300 (586)
                      .......||+.|+|||++.+  .++.++|||||||++|+|++|.+||.+.........+.....                
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (311)
T 4agu_A          157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF  236 (311)
T ss_dssp             ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred             cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccc
Confidence            33345679999999999864  579999999999999999999999998887766555433110                


Q ss_pred             ---CCCCC--------CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          301 ---DFERD--------PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       301 ---~~~~~--------~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                         ..+.+        .++.++..+.+||.+||+.||.+|||++|+|+||||++..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  292 (311)
T 4agu_A          237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIR  292 (311)
T ss_dssp             TTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             ccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhcc
Confidence               11110        1246889999999999999999999999999999999754

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=6.8e-48  Score=424.95  Aligned_cols=260  Identities=27%  Similarity=0.487  Sum_probs=235.0

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++++.||+|+||.||+|++..+++.||+|++.+.........+.+..|..++..+.+||+|+++++++++.+.+|
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            35789999999999999999999999999999999987644333445678889999998878999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC-C
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-P  237 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~-~  237 (586)
                      |||||++||+|..++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+... .
T Consensus       419 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl---~~~g~ikL~DFGla~~~~~~  495 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKENIWD  495 (674)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEE---CSSSCEEECCCTTCEECCCT
T ss_pred             EEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEE---cCCCcEEEeecceeeccccC
Confidence            999999999999999988899999999999999999999999999999999999999   677899999999998643 3


Q ss_pred             CCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      .......+||+.|+|||++. ..|+.++|||||||++|+|++|.+||.+.+..++...|......++.    .+++++++
T Consensus       496 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s~~~~~  571 (674)
T 3pfq_A          496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVA  571 (674)
T ss_dssp             TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCT----TSCHHHHH
T ss_pred             CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCc----cCCHHHHH
Confidence            34455678999999999997 57999999999999999999999999999999999999998877654    58999999


Q ss_pred             HHHHccCCCCCCCCCH-----HHHhcCCCccCCC
Q 043828          317 LVKNMLDPNPYNRLTL-----EEVLENPWIKNDN  345 (586)
Q Consensus       317 li~~~L~~dp~~Rps~-----~eil~hp~~~~~~  345 (586)
                      ||.+||++||.+||++     ++|++||||+...
T Consensus       572 li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~  605 (674)
T 3pfq_A          572 ICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID  605 (674)
T ss_dssp             HHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCC
T ss_pred             HHHHHccCCHHHCCCCCCCcHHHHhcCccccCCC
Confidence            9999999999999997     9999999998753

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=5.4e-48  Score=408.46  Aligned_cols=258  Identities=26%  Similarity=0.428  Sum_probs=211.1

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC---
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK---  154 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~---  154 (586)
                      .+.++|++++.||+|+||+||+|++..+|+.||+|++.+.. ........+.+|+.+|+.+ +||||+++++++...   
T Consensus        59 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~  136 (464)
T 3ttj_A           59 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTL  136 (464)
T ss_dssp             EEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG-GSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCST
T ss_pred             eecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc-cChHHHHHHHHHHHHHHhC-CCCCCCcEEEEEccCCcc
Confidence            35689999999999999999999999999999999997653 2344567788999999999 899999999999654   


Q ss_pred             ---CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          155 ---DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       155 ---~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                         ..+||||||+++ +|.+.+.  ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+
T Consensus       137 ~~~~~~~lv~E~~~~-~l~~~~~--~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll---~~~~~~kl~DFG~  210 (464)
T 3ttj_A          137 EEFQDVYLVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL  210 (464)
T ss_dssp             TTCCEEEEEEECCSE-EHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCC
T ss_pred             ccCCeEEEEEeCCCC-CHHHHHh--hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEE---eCCCCEEEEEEEe
Confidence               467999999976 5666664  349999999999999999999999999999999999999   6778999999999


Q ss_pred             ccccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCC--------
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF--------  302 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--------  302 (586)
                      |............+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+.......+.......        
T Consensus       211 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~  290 (464)
T 3ttj_A          211 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL  290 (464)
T ss_dssp             C-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTS
T ss_pred             eeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHc
Confidence            988766555667889999999999864 79999999999999999999999999988877766665421111        


Q ss_pred             --------------CCCCCC----C------------CCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          303 --------------ERDPWP----K------------VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       303 --------------~~~~~~----~------------~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                                    ....++    .            .++++++||.+||..||.+|||++|+|+||||+.
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~  361 (464)
T 3ttj_A          291 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  361 (464)
T ss_dssp             CHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             chhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence                          000000    0            1467999999999999999999999999999984

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.7e-47  Score=397.06  Aligned_cols=261  Identities=20%  Similarity=0.294  Sum_probs=216.5

Q ss_pred             ccCeeecceeccC--CceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           80 LDKYTFGKELGRG--EFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        80 ~~~y~~~~~lG~G--~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .++|++++.||+|  +||.||+|++..+|+.||+|++...... ......+.+|+.+++.+ +|||||++++++.+.+.+
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~  101 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS-NEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNEL  101 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC-hHHHHHHHHHHHHHHhC-CCCCCCcEeEEEEECCEE
Confidence            4689999999999  9999999999999999999999876533 34457788999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          158 YLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      |+|||||++|+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||.+...
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll---~~~~~~kl~dfg~~~~~  178 (389)
T 3gni_B          102 WVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI---SVDGKVYLSGLRSNLSM  178 (389)
T ss_dssp             EEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCGGGCEEC
T ss_pred             EEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE---cCCCCEEEcccccceee
Confidence            9999999999999999875  679999999999999999999999999999999999999   67789999999988654


Q ss_pred             CCC--------CceecccCCccccchhhhhc---cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccC---
Q 043828          236 KPG--------EQFCEIVGSPYYMAPEVLRR---NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID---  301 (586)
Q Consensus       236 ~~~--------~~~~~~~gt~~y~aPE~l~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~---  301 (586)
                      ...        ......+||+.|+|||++.+   .|+.++|||||||++|+|++|..||.+.+.......+..+...   
T Consensus       179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  258 (389)
T 3gni_B          179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL  258 (389)
T ss_dssp             EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred             ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence            221        11223478999999999864   5899999999999999999999999876554443333222111   


Q ss_pred             ---------------------------------------CCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCcc
Q 043828          302 ---------------------------------------FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK  342 (586)
Q Consensus       302 ---------------------------------------~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~  342 (586)
                                                             ...+.+..+++.+.+||.+||+.||.+|||+.|+|+||||+
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~  338 (389)
T 3gni_B          259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK  338 (389)
T ss_dssp             -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGG
T ss_pred             cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHH
Confidence                                                   00112345789999999999999999999999999999998


Q ss_pred             CCC
Q 043828          343 NDN  345 (586)
Q Consensus       343 ~~~  345 (586)
                      ...
T Consensus       339 ~~~  341 (389)
T 3gni_B          339 QIK  341 (389)
T ss_dssp             GC-
T ss_pred             HHh
Confidence            653

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.9e-48  Score=396.26  Aligned_cols=265  Identities=35%  Similarity=0.651  Sum_probs=227.6

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccC--ChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK--TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~--~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      .+.++|++.+.||+|+||+||+|.+..++..||+|++.+....  .....+.+.+|+.+++++ +||||+++++++.+.+
T Consensus        23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~  101 (345)
T 3hko_A           23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-HHPNIARLYEVYEDEQ  101 (345)
T ss_dssp             HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-CCTTBCCEEEEEECSS
T ss_pred             hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-CCCCcceeehhhccCC
Confidence            3457899999999999999999999999999999999765432  233457899999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHh----------------------------------------CCCCCHHHHHHHHHHHHHHH
Q 043828          156 AIYLVMELCEGGELFDRIVN----------------------------------------KGHYTERAAAAVGKTILRIV  195 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~----------------------------------------~~~~~~~~~~~i~~qi~~~l  195 (586)
                      .+|+|||||+||+|.+++..                                        ...+++..++.++.||+.||
T Consensus       102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l  181 (345)
T 3hko_A          102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL  181 (345)
T ss_dssp             EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence            99999999999999988742                                        11236788899999999999


Q ss_pred             HHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-----ceecccCCccccchhhhh---ccCCCcchHH
Q 043828          196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-----QFCEIVGSPYYMAPEVLR---RNYGPEIDVW  267 (586)
Q Consensus       196 ~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~l~---~~~~~~~Diw  267 (586)
                      .|||++||+||||||+||+++. +....+||+|||++.......     ......||+.|+|||++.   ..++.++|||
T Consensus       182 ~~LH~~~ivH~Dlkp~NIll~~-~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diw  260 (345)
T 3hko_A          182 HYLHNQGICHRDIKPENFLFST-NKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAW  260 (345)
T ss_dssp             HHHHHTTEECCCCCGGGEEESC-SSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHH
T ss_pred             HHHHHCCccccCCChhhEEEec-CCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHH
Confidence            9999999999999999999953 223489999999998653211     234567999999999985   4688999999


Q ss_pred             HHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          268 SAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       268 slG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ||||++|+|++|..||.+.+.......+......++.+.+..+++.+.+||.+||+.||.+|||+.++|+||||+..
T Consensus       261 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~  337 (345)
T 3hko_A          261 SAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQF  337 (345)
T ss_dssp             HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTT
T ss_pred             HHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccC
Confidence            99999999999999999999999999998888888777777799999999999999999999999999999999864

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=3.3e-47  Score=386.67  Aligned_cols=258  Identities=30%  Similarity=0.500  Sum_probs=231.9

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ...+|.+++.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++.+ +||||+++++++.+.+.+|
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~  117 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVF  117 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCeEE
Confidence            457899999999999999999999999999999999877655555667889999999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      +||||+++++|.+++.....+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++......
T Consensus       118 lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~---~~~~~~kl~Dfg~~~~~~~~  194 (335)
T 2owb_A          118 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYD  194 (335)
T ss_dssp             EEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECCST
T ss_pred             EEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEE---cCCCCEEEeeccCceecccC
Confidence            999999999999999888889999999999999999999999999999999999999   56789999999999876432


Q ss_pred             -CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          239 -EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       239 -~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                       .......||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+......++    ..++..+.+
T Consensus       195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  270 (335)
T 2owb_A          195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAAS  270 (335)
T ss_dssp             TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC----TTSCHHHHH
T ss_pred             cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCC----ccCCHHHHH
Confidence             33345679999999999864 588899999999999999999999999888888777777765543    357899999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ||.+||+.||.+|||+.++|+||||...
T Consensus       271 li~~~l~~dp~~Rps~~ell~~~~~~~~  298 (335)
T 2owb_A          271 LIQKMLQTDPTARPTINELLNDEFFTSG  298 (335)
T ss_dssp             HHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred             HHHHHccCChhHCcCHHHHhcCccccCC
Confidence            9999999999999999999999999864

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=2.3e-47  Score=378.66  Aligned_cols=258  Identities=33%  Similarity=0.624  Sum_probs=229.6

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ...++|++.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.+ +||||+++++++.+.+.+
T Consensus        11 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   89 (284)
T 2vgo_A           11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-RHPNILRMYNYFHDRKRI   89 (284)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEE
T ss_pred             hhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-CCCCEeeEEEEEEcCCEE
Confidence            3457899999999999999999999999999999999765443333456789999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |+||||+++++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.....
T Consensus        90 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~Dfg~~~~~~~  166 (284)
T 2vgo_A           90 YLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLM---GYKGELKIADFGWSVHAPS  166 (284)
T ss_dssp             EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECSS
T ss_pred             EEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE---cCCCCEEEecccccccCcc
Confidence            9999999999999999888889999999999999999999999999999999999999   5678999999999876543


Q ss_pred             CCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      . ......|++.|+|||++.+ .++.++||||||+++|+|++|..||...+.......+......++    +.++..+++
T Consensus       167 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  241 (284)
T 2vgo_A          167 L-RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGSKD  241 (284)
T ss_dssp             S-CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHHHHH
T ss_pred             c-ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCC----CcCCHHHHH
Confidence            2 2345679999999999874 588999999999999999999999999888888887777665543    357899999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ||.+||..||.+|||+.++++||||+..
T Consensus       242 li~~~l~~~p~~Rps~~~ll~h~~~~~~  269 (284)
T 2vgo_A          242 LISKLLRYHPPQRLPLKGVMEHPWVKAN  269 (284)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred             HHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence            9999999999999999999999999854

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=2.4e-47  Score=407.26  Aligned_cols=259  Identities=28%  Similarity=0.480  Sum_probs=228.2

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ...++|.+.+.||+|+||.||+|++..+|+.||+|++.+...........+.+|+.+++++ +||||+++++++++...+
T Consensus       182 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-~hp~Iv~l~~~~~~~~~l  260 (543)
T 3c4z_A          182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFIVSLAYAFETKTDL  260 (543)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CCTTBCCEEEEEECSSEE
T ss_pred             CChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-CCCCEeeEEEEEeeCCEE
Confidence            3457899999999999999999999999999999999876544444567889999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          158 YLVMELCEGGELFDRIVNK----GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                      |+|||||+||+|..++...    ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.
T Consensus       261 ~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl---~~~g~vkL~DFGla~  337 (543)
T 3c4z_A          261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAV  337 (543)
T ss_dssp             EEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTTCE
T ss_pred             EEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEE---eCCCCEEEeecceee
Confidence            9999999999999998763    369999999999999999999999999999999999999   678899999999998


Q ss_pred             ccCCCCc-eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCC----CHHHHHHHHHhCccCCCCCCC
Q 043828          234 FFKPGEQ-FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERDPW  307 (586)
Q Consensus       234 ~~~~~~~-~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~----~~~~~~~~i~~~~~~~~~~~~  307 (586)
                      ....... ....+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.    ....+...+......++    
T Consensus       338 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p----  413 (543)
T 3c4z_A          338 ELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----  413 (543)
T ss_dssp             ECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCC----
T ss_pred             eccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCC----
Confidence            7654433 334689999999999974 6899999999999999999999999875    45667777777665554    


Q ss_pred             CCCCHHHHHHHHHccCCCCCCCCC-----HHHHhcCCCccCC
Q 043828          308 PKVSKEAKELVKNMLDPNPYNRLT-----LEEVLENPWIKND  344 (586)
Q Consensus       308 ~~~~~~~~~li~~~L~~dp~~Rps-----~~eil~hp~~~~~  344 (586)
                      +.+++.+++||.+||.+||.+||+     ++++++||||+..
T Consensus       414 ~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i  455 (543)
T 3c4z_A          414 DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI  455 (543)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred             cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence            468999999999999999999995     5899999999864

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=1.3e-47  Score=397.88  Aligned_cols=256  Identities=31%  Similarity=0.463  Sum_probs=210.7

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC--
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD--  155 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~--  155 (586)
                      ....+|++.+.||+|+||+||+|++..++. +|+|++......       ..+|+.+++.+ +||||+++++++....  
T Consensus        37 ~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~-------~~~E~~il~~l-~h~niv~l~~~~~~~~~~  107 (394)
T 4e7w_A           37 QREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF-------KNRELQIMRIV-KHPNVVDLKAFFYSNGDK  107 (394)
T ss_dssp             EEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS-------CCHHHHHHHTC-CCTTBCCEEEEEEEESSS
T ss_pred             cccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch-------HHHHHHHHHhC-CCCCcceEEEEEEecCCC
Confidence            345689999999999999999999877665 888888654321       23699999999 8999999999996543  


Q ss_pred             ----eEEEEEeccCCCChHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEe
Q 043828          156 ----AIYLVMELCEGGELFDRIV----NKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI  227 (586)
Q Consensus       156 ----~~~iv~E~~~gg~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~  227 (586)
                          .+|+|||||+++ +...+.    ....+++..++.++.||+.||.|||++||+||||||+|||++  ..++.+||+
T Consensus       108 ~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~--~~~~~~kL~  184 (394)
T 4e7w_A          108 KDEVFLNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLD--PPSGVLKLI  184 (394)
T ss_dssp             SSCEEEEEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEEEEC
T ss_pred             CCceEEEEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEc--CCCCcEEEe
Confidence                388999999875 433332    356799999999999999999999999999999999999994  257899999


Q ss_pred             ecccccccCCCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCc------
Q 043828          228 DFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK------  299 (586)
Q Consensus       228 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~------  299 (586)
                      |||+|.............||+.|+|||++.+  .|+.++|||||||++|+|++|.+||.+.+.......+.+..      
T Consensus       185 DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~  264 (394)
T 4e7w_A          185 DFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSRE  264 (394)
T ss_dssp             CCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHH
T ss_pred             eCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence            9999988766666667789999999999854  58999999999999999999999999988777666554321      


Q ss_pred             -----------cCCCC---C-----CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          300 -----------IDFER---D-----PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       300 -----------~~~~~---~-----~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                                 ..++.   .     ..+.+++++.+||.+||..||.+|||+.|+++||||+...
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  329 (394)
T 4e7w_A          265 QIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR  329 (394)
T ss_dssp             HHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred             HHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence                       01111   0     1234789999999999999999999999999999998653

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=2.3e-47  Score=383.63  Aligned_cols=255  Identities=26%  Similarity=0.379  Sum_probs=210.8

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      +.++|++.++||+|+||+||+|++..+|+.||||++...... .........|+..+.++.+||||+++++++.+.+.+|
T Consensus        55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~  133 (311)
T 3p1a_A           55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRG-PKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILY  133 (311)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCS-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccC-hHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEE
Confidence            346899999999999999999999999999999998654322 2333455566666666668999999999999999999


Q ss_pred             EEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          159 LVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      +||||+ +++|.+++.. ...+++..++.++.||+.||.|||+.+|+||||||+|||+   +.++.+||+|||++.....
T Consensus       134 lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kl~DFG~a~~~~~  209 (311)
T 3p1a_A          134 LQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFL---GPRGRCKLGDFGLLVELGT  209 (311)
T ss_dssp             EEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CGGGCEEECCCTTCEECC-
T ss_pred             EEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEE---CCCCCEEEccceeeeeccc
Confidence            999999 6788888776 4469999999999999999999999999999999999999   5678999999999987765


Q ss_pred             CCceecccCCccccchhhhhccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                      ........||+.|+|||++.+.++.++|||||||++|+|++|..||.....   ...+..+..  +......+++.+.+|
T Consensus       210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~l~~l  284 (311)
T 3p1a_A          210 AGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEG---WQQLRQGYL--PPEFTAGLSSELRSV  284 (311)
T ss_dssp             -----CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---HHHHTTTCC--CHHHHTTSCHHHHHH
T ss_pred             CCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccH---HHHHhccCC--CcccccCCCHHHHHH
Confidence            555556679999999999988899999999999999999999877765322   223333222  112234689999999


Q ss_pred             HHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          318 VKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       318 i~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      |.+||+.||.+|||+.|+|+||||+.
T Consensus       285 i~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          285 LVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             HHHHcCCChhhCcCHHHHHhCccccC
Confidence            99999999999999999999999974

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=2.4e-47  Score=376.76  Aligned_cols=258  Identities=35%  Similarity=0.639  Sum_probs=220.9

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++++.||+|+||.||+|.+..+|+.||+|++...........+.+.+|+.+++.+ +||||+++++++...+.+|
T Consensus         9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   87 (276)
T 2h6d_A            9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-RHPHIIKLYQVISTPTDFF   87 (276)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEE
T ss_pred             eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCeEE
Confidence            457899999999999999999999999999999999765433334457889999999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      +||||+++++|.+++.....+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++......
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~~l~dfg~~~~~~~~  164 (276)
T 2h6d_A           88 MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL---DAHMNAKIADFGLSNMMSDG  164 (276)
T ss_dssp             EEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEE---CTTSCEEECCCCGGGCCCC-
T ss_pred             EEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEE---CCCCCEEEeecccccccCCC
Confidence            999999999999999888889999999999999999999999999999999999999   56789999999999877655


Q ss_pred             CceecccCCccccchhhhhcc-C-CCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          239 EQFCEIVGSPYYMAPEVLRRN-Y-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~~~-~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      .......||+.|+|||++.+. + +.++||||||+++|+|++|..||...........+..+...++    ..++..+.+
T Consensus       165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~  240 (276)
T 2h6d_A          165 EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP----EYLNRSVAT  240 (276)
T ss_dssp             ------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHH
T ss_pred             cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCc----hhcCHHHHH
Confidence            545566799999999998753 3 5789999999999999999999999888888888877665443    357899999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ||.+||+.||.+|||+.++++||||+..
T Consensus       241 li~~~l~~~p~~Rps~~~~l~h~~~~~~  268 (276)
T 2h6d_A          241 LLMHMLQVDPLKRATIKDIREHEWFKQD  268 (276)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HHHHHccCChhhCCCHHHHHhChhhccC
Confidence            9999999999999999999999999864

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=7.6e-48  Score=389.26  Aligned_cols=264  Identities=38%  Similarity=0.671  Sum_probs=221.3

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccC-----ChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK-----TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYE  152 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~-----~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~  152 (586)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++......     .......+.+|+.+++++ +||||+++++++.
T Consensus         7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~   85 (322)
T 2ycf_A            7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-NHPCIIKIKNFFD   85 (322)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHC-CCTTBCCEEEEEE
T ss_pred             hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-CCCCCceEeeEEc
Confidence            3457899999999999999999999999999999999765321     112234578999999999 8999999999997


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          153 DKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       153 ~~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                      ... +|+||||+++++|.+++.....+++..++.++.||+.||.|||++||+||||||+||+++.......+||+|||++
T Consensus        86 ~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~  164 (322)
T 2ycf_A           86 AED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS  164 (322)
T ss_dssp             SSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTC
T ss_pred             CCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccc
Confidence            655 8999999999999999988888999999999999999999999999999999999999965444556999999999


Q ss_pred             cccCCCCceecccCCccccchhhhh----ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHH-HHHHHHHhCccCCCCCCC
Q 043828          233 IFFKPGEQFCEIVGSPYYMAPEVLR----RNYGPEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGKIDFERDPW  307 (586)
Q Consensus       233 ~~~~~~~~~~~~~gt~~y~aPE~l~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~  307 (586)
                      .............||+.|+|||++.    ..++.++|||||||++|+|++|..||...... .....+..+...+....+
T Consensus       165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  244 (322)
T 2ycf_A          165 KILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW  244 (322)
T ss_dssp             EECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHH
T ss_pred             eecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhh
Confidence            8775544445567999999999973    45889999999999999999999999764432 344555566555544445


Q ss_pred             CCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       308 ~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      ..++..+.+||.+||..||.+|||+.++|+||||+.
T Consensus       245 ~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~  280 (322)
T 2ycf_A          245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD  280 (322)
T ss_dssp             TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCC
T ss_pred             hhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCC
Confidence            678999999999999999999999999999999985

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=6.5e-47  Score=387.18  Aligned_cols=261  Identities=30%  Similarity=0.463  Sum_probs=221.4

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe----
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED----  153 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~----  153 (586)
                      ...++|++++.||+|+||+||+|++..+|+.||+|++....... .....+.+|+.+++.+ +||||+++++++..    
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~   91 (351)
T 3mi9_A           14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-GFPITALREIKILQLL-KHENVVNLIEICRTKASP   91 (351)
T ss_dssp             CBGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS-SSCHHHHHHHHHHHHC-CCTTBCCEEEEEEEC---
T ss_pred             ccccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccc-cchHHHHHHHHHHHhc-cCCCcccHhheeeccccc
Confidence            34579999999999999999999999999999999987664332 2235678899999999 89999999999987    


Q ss_pred             ----CCeEEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEee
Q 043828          154 ----KDAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID  228 (586)
Q Consensus       154 ----~~~~~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~D  228 (586)
                          .+.+|+|||||++ +|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|
T Consensus        92 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~---~~~~~~kl~D  167 (351)
T 3mi9_A           92 YNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLAD  167 (351)
T ss_dssp             -----CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECC
T ss_pred             cccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE---cCCCCEEEcc
Confidence                4568999999975 77776665 3579999999999999999999999999999999999999   6678999999


Q ss_pred             cccccccCC-----CCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccC
Q 043828          229 FGLSIFFKP-----GEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID  301 (586)
Q Consensus       229 fg~a~~~~~-----~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~  301 (586)
                      ||++.....     ........||+.|+|||++.+  .++.++|||||||++|+|++|.+||.+.+.......+......
T Consensus       168 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~  247 (351)
T 3mi9_A          168 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS  247 (351)
T ss_dssp             CTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             chhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence            999986542     122345678999999999864  5899999999999999999999999999988887777665444


Q ss_pred             CCCCCCCCC----------------------------CHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          302 FERDPWPKV----------------------------SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       302 ~~~~~~~~~----------------------------~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ++...|+.+                            ++.+.+||.+||..||.+|||++|+|+||||+..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  318 (351)
T 3mi9_A          248 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  318 (351)
T ss_dssp             CCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSS
T ss_pred             CChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCC
Confidence            444444332                            6789999999999999999999999999999864

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=1.3e-46  Score=375.16  Aligned_cols=258  Identities=30%  Similarity=0.500  Sum_probs=231.4

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|.+.+.||+|+||.||+|.+..+++.+|+|++...........+.+.+|+.+++.+ +||||+++++++.+.+.+|
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~   91 (294)
T 2rku_A           13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVF   91 (294)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCEEE
Confidence            457899999999999999999999999999999999877655555667889999999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      +||||+++++|.+++.....+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||++......
T Consensus        92 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~~~  168 (294)
T 2rku_A           92 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYD  168 (294)
T ss_dssp             EEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEECCST
T ss_pred             EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEE---cCCCCEEEEeccCceecccC
Confidence            999999999999999888889999999999999999999999999999999999999   56789999999999876432


Q ss_pred             -CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          239 -EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       239 -~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                       .......||+.|+|||++.+ .++.++||||||+++|+|++|..||......+....+......++    ..++..+.+
T Consensus       169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  244 (294)
T 2rku_A          169 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAAS  244 (294)
T ss_dssp             TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHHHHH
T ss_pred             ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCc----cccCHHHHH
Confidence             23345679999999999864 588899999999999999999999999888887777777665443    357899999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ||.+||+.||.+|||+.++++||||...
T Consensus       245 li~~~l~~~p~~Rps~~~ll~~~~~~~~  272 (294)
T 2rku_A          245 LIQKMLQTDPTARPTINELLNDEFFTSG  272 (294)
T ss_dssp             HHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred             HHHHHcccChhhCcCHHHHhhChheecC
Confidence            9999999999999999999999999864

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.4e-47  Score=388.86  Aligned_cols=254  Identities=32%  Similarity=0.554  Sum_probs=219.5

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCCh-----hcHHHHHHHHHHHHhCCCCCCeeEEEEEE
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE-----IDIDDVRREVEIMRHLPKHPNIVTYKEAY  151 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~-----~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~  151 (586)
                      +.+.++|++.+.||+|+||.||+|++..+|+.||+|++........     .....+.+|+.+++++ +||||+++++++
T Consensus        20 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~Iv~~~~~~   98 (335)
T 3dls_A           20 GEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-EHANIIKVLDIF   98 (335)
T ss_dssp             THHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-CCTTBCCEEEEE
T ss_pred             cccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEE
Confidence            4566899999999999999999999999999999999987643221     1234567899999999 899999999999


Q ss_pred             EeCCeEEEEEeccCCC-ChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecc
Q 043828          152 EDKDAIYLVMELCEGG-ELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG  230 (586)
Q Consensus       152 ~~~~~~~iv~E~~~gg-~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg  230 (586)
                      .+.+.+++||||+.+| +|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||
T Consensus        99 ~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~Dfg  175 (335)
T 3dls_A           99 ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI---AEDFTIKLIDFG  175 (335)
T ss_dssp             ECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCT
T ss_pred             eeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEE---cCCCcEEEeecc
Confidence            9999999999999776 999999988899999999999999999999999999999999999999   567899999999


Q ss_pred             cccccCCCCceecccCCccccchhhhhc-cC-CCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCC
Q 043828          231 LSIFFKPGEQFCEIVGSPYYMAPEVLRR-NY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP  308 (586)
Q Consensus       231 ~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  308 (586)
                      ++............+||+.|+|||++.+ .+ +.++|||||||++|+|++|..||.....      ....    ......
T Consensus       176 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~----~~~~~~  245 (335)
T 3dls_A          176 SAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------TVEA----AIHPPY  245 (335)
T ss_dssp             TCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------GTTT----CCCCSS
T ss_pred             cceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------HHhh----ccCCCc
Confidence            9988766666666789999999999864 34 7789999999999999999999976321      1111    112223


Q ss_pred             CCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          309 KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .+++.+.+||.+||..||.+|||+.++++||||+..
T Consensus       246 ~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~  281 (335)
T 3dls_A          246 LVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQP  281 (335)
T ss_dssp             CCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred             ccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCC
Confidence            589999999999999999999999999999999864

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=2.1e-46  Score=378.15  Aligned_cols=255  Identities=27%  Similarity=0.474  Sum_probs=222.3

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ..|...+.||+|+||.||+|++..+|+.||||++.....   ...+.+.+|+.+++++ +||||+++++++...+.+|+|
T Consensus        45 ~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv  120 (321)
T 2c30_A           45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDY-QHFNVVEMYKSYLVGEELWVL  120 (321)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---CSHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEE
T ss_pred             hhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch---hHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEE
Confidence            358888899999999999999999999999999976532   2356788999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC-C
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-E  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~  239 (586)
                      |||++|++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||++...... .
T Consensus       121 ~e~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~~~~~~~~~~  196 (321)
T 2c30_A          121 MEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL---TLDGRVKLSDFGFCAQISKDVP  196 (321)
T ss_dssp             ECCCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCSSSC
T ss_pred             EecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---CCCCcEEEeeeeeeeecccCcc
Confidence            999999999988754 579999999999999999999999999999999999999   56789999999998876433 2


Q ss_pred             ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHH
Q 043828          240 QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV  318 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  318 (586)
                      ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...+.......+....... ......+++.+.+||
T Consensus       197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li  275 (321)
T 2c30_A          197 KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPK-LKNSHKVSPVLRDFL  275 (321)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCC-CTTGGGSCHHHHHHH
T ss_pred             ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC-cCccccCCHHHHHHH
Confidence            3345689999999999864 68999999999999999999999999988887777766554322 122346789999999


Q ss_pred             HHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          319 KNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       319 ~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .+||..||.+|||+.++++||||...
T Consensus       276 ~~~l~~dp~~Rps~~ell~hp~~~~~  301 (321)
T 2c30_A          276 ERMLVRDPQERATAQELLDHPFLLQT  301 (321)
T ss_dssp             HHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred             HHHccCChhhCcCHHHHhcChhhccC
Confidence            99999999999999999999999854

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.5e-47  Score=377.09  Aligned_cols=260  Identities=33%  Similarity=0.586  Sum_probs=200.8

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      +...++|++.+.||+|+||.||+|.+..+|+.||+|++...........+.+.+|+.+++++ +||||+++++++.+.+.
T Consensus         7 g~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~   85 (278)
T 3cok_A            7 GEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-KHPSILELYNYFEDSNY   85 (278)
T ss_dssp             CSSGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-CCTTBCCEEEEEECSSE
T ss_pred             ccccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-CCCCeEeEEEEEccCCe
Confidence            34567899999999999999999999999999999999765433333457889999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      +|+||||+++++|.+++... ..+++..++.++.|++.||.|||++||+||||||+||++   +.++.+||+|||++...
T Consensus        86 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili---~~~~~~kl~dfg~~~~~  162 (278)
T 3cok_A           86 VYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL---TRNMNIKIADFGLATQL  162 (278)
T ss_dssp             EEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEE---CTTCCEEECCCTTCEEC
T ss_pred             EEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---cCCCCEEEEeecceeec
Confidence            99999999999999998865 579999999999999999999999999999999999999   56789999999999876


Q ss_pred             CCC-CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          236 KPG-EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       236 ~~~-~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+......    ....++..
T Consensus       163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~  238 (278)
T 3cok_A          163 KMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYE----MPSFLSIE  238 (278)
T ss_dssp             C----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCC----CCTTSCHH
T ss_pred             cCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccC----CccccCHH
Confidence            432 22335679999999999864 6788999999999999999999999876544433333222222    12357899


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +.+||.+||..||.+|||+.++++||||...
T Consensus       239 ~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  269 (278)
T 3cok_A          239 AKDLIHQLLRRNPADRLSLSSVLDHPFMSRN  269 (278)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHTTSTTTC--
T ss_pred             HHHHHHHHcccCHhhCCCHHHHhcCccccCC
Confidence            9999999999999999999999999999864

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=5.1e-48  Score=388.52  Aligned_cols=263  Identities=26%  Similarity=0.417  Sum_probs=223.9

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC-
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD-  155 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~-  155 (586)
                      ..+.++|++.+.||+|+||.||+|++..+++.||+|++.............+.+|+.+++++ +||||+++++++.... 
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~   86 (311)
T 3ork_A            8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETP   86 (311)
T ss_dssp             SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-CCTTBCCEEEEEEEEET
T ss_pred             ceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-CCCCcceEEEeeeccCC
Confidence            45668999999999999999999999999999999999876555555567889999999999 8999999999987654 


Q ss_pred             ---eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          156 ---AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       156 ---~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                         .+|+||||++|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++
T Consensus        87 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~a  163 (311)
T 3ork_A           87 AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIA  163 (311)
T ss_dssp             TEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---ETTSCEEECCCSCC
T ss_pred             CCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEE---cCCCCEEEeeccCc
Confidence               359999999999999999888889999999999999999999999999999999999999   46678999999999


Q ss_pred             cccCCCC----ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCC
Q 043828          233 IFFKPGE----QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW  307 (586)
Q Consensus       233 ~~~~~~~----~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  307 (586)
                      .......    ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......+.......+...+
T Consensus       164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  243 (311)
T 3ork_A          164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARH  243 (311)
T ss_dssp             ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHS
T ss_pred             ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCccccc
Confidence            8654322    2234579999999999874 6889999999999999999999999999888877777776655444445


Q ss_pred             CCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       308 ~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      +.++..+.+||.+||+.||.+||++.+++.|+|++.
T Consensus       244 ~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          244 EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            678999999999999999999999999999999974

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=9.1e-47  Score=390.89  Aligned_cols=255  Identities=28%  Similarity=0.483  Sum_probs=214.6

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCC-CCCeeEEEEEEEeCCeEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK-HPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~-hpnIv~l~~~~~~~~~~~i  159 (586)
                      .+|++++.||+|+||+||+|.+.. ++.||+|++..... .....+.+.+|+.+|++|.. ||||+++++++...+.+||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l  133 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM  133 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence            469999999999999999998754 89999999976543 33445788999999999953 6999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      ||| +.+++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+.    ++.+||+|||++.......
T Consensus       134 v~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~----~~~~kl~DFG~a~~~~~~~  208 (390)
T 2zmd_A          134 VME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDT  208 (390)
T ss_dssp             EEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES----SSCEEECCCSSSCCC----
T ss_pred             EEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE----CCeEEEEecCccccccCCC
Confidence            999 56889999999888999999999999999999999999999999999999993    3689999999998764332


Q ss_pred             ---ceecccCCccccchhhhhc------------cCCCcchHHHHHHHHHHHhhCCCCCCCCC-HHHHHHHHHhCccCCC
Q 043828          240 ---QFCEIVGSPYYMAPEVLRR------------NYGPEIDVWSAGVIIYILLCGVPPFWAET-EEGIAHAIIRGKIDFE  303 (586)
Q Consensus       240 ---~~~~~~gt~~y~aPE~l~~------------~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~~i~~~~~~~~  303 (586)
                         .....+||+.|+|||++.+            .|+.++|||||||++|+|++|..||.... .......+......+.
T Consensus       209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~  288 (390)
T 2zmd_A          209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE  288 (390)
T ss_dssp             -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCC
T ss_pred             ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCC
Confidence               2235679999999999864            58889999999999999999999998753 3345555555544443


Q ss_pred             CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       304 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .+  ...+..+.+||.+||..||.+|||+.|+|+||||+..
T Consensus       289 ~~--~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  327 (390)
T 2zmd_A          289 FP--DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  327 (390)
T ss_dssp             CC--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             CC--ccchHHHHHHHHHHcccChhhCCCHHHHhhCcCcccc
Confidence            33  2357899999999999999999999999999999854

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.6e-47  Score=388.82  Aligned_cols=258  Identities=25%  Similarity=0.425  Sum_probs=214.6

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC---
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK---  154 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~---  154 (586)
                      .+.++|++++.||+|+||.||+|.+..+|+.||+|++.... ........+.+|+.+++.+ +||||+++++++...   
T Consensus        22 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~hpnIv~l~~~~~~~~~~   99 (367)
T 1cm8_A           22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETL   99 (367)
T ss_dssp             CCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSST
T ss_pred             eecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhC-CCcCCCCceeeEecCCcc
Confidence            45578999999999999999999999999999999986543 2344456788999999999 899999999999865   


Q ss_pred             ---CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          155 ---DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       155 ---~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                         ..+|+||||+ +++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+
T Consensus       100 ~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~  174 (367)
T 1cm8_A          100 DDFTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGL  174 (367)
T ss_dssp             TTCCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTT
T ss_pred             ccCceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEE---cCCCCEEEEeeec
Confidence               3469999999 8899988876 579999999999999999999999999999999999999   5678999999999


Q ss_pred             ccccCCCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCC-------
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF-------  302 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-------  302 (586)
                      +.....  .....+||+.|+|||++.+  .|+.++||||+||++|+|++|.+||.+.+.......+.......       
T Consensus       175 a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~  252 (367)
T 1cm8_A          175 ARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR  252 (367)
T ss_dssp             CEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred             cccccc--ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence            987543  2345689999999999864  68999999999999999999999999988777666654321111       


Q ss_pred             ----------------CC----CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          303 ----------------ER----DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       303 ----------------~~----~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                      ..    ..++.+++.+.+||.+||..||.+|||+.++|+||||+..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~  314 (367)
T 1cm8_A          253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL  314 (367)
T ss_dssp             CSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             hhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhh
Confidence                            11    1235678999999999999999999999999999999864

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=2.5e-46  Score=379.46  Aligned_cols=255  Identities=27%  Similarity=0.489  Sum_probs=213.3

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe--CCe
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED--KDA  156 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~--~~~  156 (586)
                      ..++|++++.||+|+||.||+|++..+++.||+|++...      ..+.+.+|+.+++++.+||||+++++++.+  ...
T Consensus        34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~  107 (330)
T 3nsz_A           34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT  107 (330)
T ss_dssp             EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCC
T ss_pred             CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCc
Confidence            347899999999999999999999999999999998643      236789999999999669999999999997  678


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      .++||||+++++|.+++.   .+++..+..++.||+.||.|||++||+||||||+|||++  .....+||+|||++....
T Consensus       108 ~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~--~~~~~~kl~Dfg~a~~~~  182 (330)
T 3nsz_A          108 PALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYH  182 (330)
T ss_dssp             EEEEEECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE--TTTTEEEECCCTTCEECC
T ss_pred             eEEEEeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEc--CCCCEEEEEeCCCceEcC
Confidence            999999999999988774   489999999999999999999999999999999999995  233489999999998776


Q ss_pred             CCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCC-CHHHHHHH-------------HHhCcc
Q 043828          237 PGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAE-TEEGIAHA-------------IIRGKI  300 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~-------------i~~~~~  300 (586)
                      .........||+.|+|||++.+  .++.++|||||||++|+|++|..||... ........             +.....
T Consensus       183 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~  262 (330)
T 3nsz_A          183 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI  262 (330)
T ss_dssp             TTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred             CCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcc
Confidence            6666666789999999999864  5899999999999999999999999543 22222222             111111


Q ss_pred             CCC--------------------CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          301 DFE--------------------RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       301 ~~~--------------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ...                    ......+++.+.+||.+||+.||.+|||++|+|+||||+..
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~  326 (330)
T 3nsz_A          263 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV  326 (330)
T ss_dssp             CCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             ccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhh
Confidence            111                    11112378999999999999999999999999999999865

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=1.7e-46  Score=382.75  Aligned_cols=256  Identities=28%  Similarity=0.447  Sum_probs=222.3

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ....|++++.||+|+||.||+|++..+|+.||+|++.............+.+|+.+++++ +||||+++++++...+..|
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~  130 (348)
T 1u5q_A           52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAW  130 (348)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE
T ss_pred             hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCeEE
Confidence            345799999999999999999999999999999999765444444456788999999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          159 LVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      +||||+. |+|.+++. ....+++..+..++.|++.||.|||++||+||||||+|||+   +.++.+||+|||++.....
T Consensus       131 lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~a~~~~~  206 (348)
T 1u5q_A          131 LVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAP  206 (348)
T ss_dssp             EEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEE---ETTTEEEECCCTTCBSSSS
T ss_pred             EEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE---CCCCCEEEeeccCceecCC
Confidence            9999997 57877775 45679999999999999999999999999999999999999   5678999999999987543


Q ss_pred             CCceecccCCccccchhhhh----ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLR----RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      .   ....||+.|+|||++.    +.++.++|||||||++|+|++|..||...+.......+........  ....++..
T Consensus       207 ~---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  281 (348)
T 1u5q_A          207 A---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL--QSGHWSEY  281 (348)
T ss_dssp             B---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC--CCTTSCHH
T ss_pred             C---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCC--CCCCCCHH
Confidence            2   3467999999999984    4689999999999999999999999998887777666666543222  22467899


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +.+||.+||+.||.+|||+.++++||||...
T Consensus       282 l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~  312 (348)
T 1u5q_A          282 FRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE  312 (348)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred             HHHHHHHHcccChhhCcCHHHHhhChhhhcc
Confidence            9999999999999999999999999999764

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=1.9e-46  Score=394.02  Aligned_cols=262  Identities=28%  Similarity=0.481  Sum_probs=211.5

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC---
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK---  154 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~---  154 (586)
                      .+.++|++++.||+|+||+||+|++..+|+.||+|++.... ........+.+|+.+|+.+ +||||+++++++...   
T Consensus        23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~  100 (432)
T 3n9x_A           23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF-EDLIDCKRILREITILNRL-KSDYIIRLYDLIIPDDLL  100 (432)
T ss_dssp             CCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT-TSHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCTT
T ss_pred             eecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh-cChHHHHHHHHHHHHHHHc-CCCCcceEEEEEecCCCC
Confidence            45679999999999999999999999999999999997542 3344567889999999999 899999999999766   


Q ss_pred             --CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          155 --DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       155 --~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                        ..+|+||||+. ++|.+++.....+++..++.++.||+.||.|||+.||+||||||+|||+   +.++.+||+|||+|
T Consensus       101 ~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl---~~~~~~kL~DFGla  176 (432)
T 3n9x_A          101 KFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLA  176 (432)
T ss_dssp             TCCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTC
T ss_pred             cCCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEE---CCCCCEEEccCCCc
Confidence              57999999996 5999999888889999999999999999999999999999999999999   67789999999999


Q ss_pred             cccCCCC-----------------------ceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhC--------
Q 043828          233 IFFKPGE-----------------------QFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCG--------  279 (586)
Q Consensus       233 ~~~~~~~-----------------------~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g--------  279 (586)
                      +......                       .....+||+.|+|||++.  ..|+.++|||||||++|+|++|        
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~  256 (432)
T 3n9x_A          177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDP  256 (432)
T ss_dssp             EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSG
T ss_pred             ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccc
Confidence            8764321                       235678999999999863  4699999999999999999984        


Q ss_pred             ---CCCCCCCC-----------------HHHHHHHHHh------------------------CccCCCC---CCCCCCCH
Q 043828          280 ---VPPFWAET-----------------EEGIAHAIIR------------------------GKIDFER---DPWPKVSK  312 (586)
Q Consensus       280 ---~~pf~~~~-----------------~~~~~~~i~~------------------------~~~~~~~---~~~~~~~~  312 (586)
                         .++|.+.+                 ....+..+..                        .....+.   ..++.+++
T Consensus       257 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  336 (432)
T 3n9x_A          257 TNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISD  336 (432)
T ss_dssp             GGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCH
T ss_pred             ccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCH
Confidence               44444432                 1111111111                        0000000   01356899


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      .+.+||.+||..||.+|||++|+|+||||+...
T Consensus       337 ~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  369 (432)
T 3n9x_A          337 DGINLLESMLKFNPNKRITIDQALDHPYLKDVR  369 (432)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTC
T ss_pred             HHHHHHHHHhcCCcccCCCHHHHhcChhhhhcc
Confidence            999999999999999999999999999998753

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=1e-46  Score=387.12  Aligned_cols=258  Identities=22%  Similarity=0.388  Sum_probs=217.0

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCC----CCCCeeEEEEEEEe
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP----KHPNIVTYKEAYED  153 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~----~hpnIv~l~~~~~~  153 (586)
                      .+.++|++++.||+|+||+||+|++..+++.||+|++...    ......+..|+.+++.+.    .||||+++++++..
T Consensus        32 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~  107 (360)
T 3llt_A           32 LLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY  107 (360)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE
T ss_pred             EecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc----hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE
Confidence            4557999999999999999999999999999999998643    223456788999999994    49999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecC-------------
Q 043828          154 KDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADG-------------  218 (586)
Q Consensus       154 ~~~~~iv~E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~-------------  218 (586)
                      .+.+|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++..             
T Consensus       108 ~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~  186 (360)
T 3llt_A          108 YDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVT  186 (360)
T ss_dssp             TTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTT
T ss_pred             CCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccc
Confidence            99999999999 899999998754  59999999999999999999999999999999999999531             


Q ss_pred             ---------CCCCceEEeecccccccCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCH
Q 043828          219 ---------SENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETE  288 (586)
Q Consensus       219 ---------~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  288 (586)
                               ...+.+||+|||++.....  ......||+.|+|||++. ..|+.++|||||||++|+|++|..||...+.
T Consensus       187 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~  264 (360)
T 3llt_A          187 DGKKIQIYRTKSTGIKLIDFGCATFKSD--YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEH  264 (360)
T ss_dssp             TCCEEEEEEESCCCEEECCCTTCEETTS--CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             ccccccccccCCCCEEEEeccCceecCC--CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcH
Confidence                     1267899999999986543  234567999999999986 4689999999999999999999999998887


Q ss_pred             HHHHHHHHhCccCCCCC---------------------CCC---------------------CCCHHHHHHHHHccCCCC
Q 043828          289 EGIAHAIIRGKIDFERD---------------------PWP---------------------KVSKEAKELVKNMLDPNP  326 (586)
Q Consensus       289 ~~~~~~i~~~~~~~~~~---------------------~~~---------------------~~~~~~~~li~~~L~~dp  326 (586)
                      .+....+......++..                     .|+                     ..++.+.+||.+||+.||
T Consensus       265 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  344 (360)
T 3llt_A          265 MEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDP  344 (360)
T ss_dssp             HHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSG
T ss_pred             HHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCCh
Confidence            77666655432222100                     011                     123678899999999999


Q ss_pred             CCCCCHHHHhcCCCcc
Q 043828          327 YNRLTLEEVLENPWIK  342 (586)
Q Consensus       327 ~~Rps~~eil~hp~~~  342 (586)
                      .+|||+.|+|+||||+
T Consensus       345 ~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          345 TLRPSPAELLKHKFLE  360 (360)
T ss_dssp             GGSCCHHHHTTSGGGC
T ss_pred             hhCCCHHHHhcCcccC
Confidence            9999999999999996

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=3.1e-46  Score=371.64  Aligned_cols=256  Identities=23%  Similarity=0.398  Sum_probs=219.0

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe----CCe
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED----KDA  156 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~----~~~  156 (586)
                      ..|++.+.||+|+||.||+|.+..++..||+|++...... ....+.+.+|+.+++.+ +||||+++++++..    ...
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~  103 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKC  103 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSCEE
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC-HHHHHHHHHHHHHHHhC-CCCCeeeeeeeeccccCCCce
Confidence            4699999999999999999999999999999999866543 34467789999999999 89999999999875    466


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG--VMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      +|+||||+++++|.+++.....+++..++.++.||+.||.|||+.+  |+||||||+||+++  ...+.+||+|||++..
T Consensus       104 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~--~~~~~~kl~Dfg~~~~  181 (290)
T 1t4h_A          104 IVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLATL  181 (290)
T ss_dssp             EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES--STTSCEEECCTTGGGG
T ss_pred             EEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEE--CCCCCEEEeeCCCccc
Confidence            8999999999999999998888999999999999999999999999  99999999999994  2567999999999976


Q ss_pred             cCCCCceecccCCccccchhhhhccCCCcchHHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          235 FKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       235 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      .... ......||+.|+|||++.+.++.++|||||||++|+|++|..||..... ......+..+....  ......++.
T Consensus       182 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  258 (290)
T 1t4h_A          182 KRAS-FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA--SFDKVAIPE  258 (290)
T ss_dssp             CCTT-SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCG--GGGGCCCHH
T ss_pred             cccc-ccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCcc--ccCCCCCHH
Confidence            5433 3345679999999999988899999999999999999999999987444 44444444332211  122356789


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      +.+||.+||..||.+|||+.++|+||||+.
T Consensus       259 l~~li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          259 VKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence            999999999999999999999999999985

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=1.9e-46  Score=392.32  Aligned_cols=255  Identities=30%  Similarity=0.440  Sum_probs=211.1

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC----
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK----  154 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~----  154 (586)
                      ...+|++.+.||+|+||+||+|++..+|+.||||++.....       ...+|+.+|+.| +|||||+++++|...    
T Consensus        52 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~il~~l-~hpniv~l~~~~~~~~~~~  123 (420)
T 1j1b_A           52 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKL-DHCNIVRLRYFFYSSGEKK  123 (420)
T ss_dssp             EEEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHHTC-CCTTBCCEEEEEEEEETTT
T ss_pred             ccceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHc-CCCCccceeeEEeccCCCC
Confidence            34579999999999999999999999999999999865431       234699999999 899999999998542    


Q ss_pred             --CeEEEEEeccCCCChHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEee
Q 043828          155 --DAIYLVMELCEGGELFDRIV----NKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID  228 (586)
Q Consensus       155 --~~~~iv~E~~~gg~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~D  228 (586)
                        ..+++||||+++ +|.+.+.    ....+++..++.++.||+.||.|||++||+||||||+|||++  ...+.+||+|
T Consensus       124 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~--~~~~~~kl~D  200 (420)
T 1j1b_A          124 DEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCD  200 (420)
T ss_dssp             TEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEE--TTTTEEEECC
T ss_pred             cceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEe--CCCCeEEecc
Confidence              237799999976 6655554    356799999999999999999999999999999999999995  2346789999


Q ss_pred             cccccccCCCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhC--------
Q 043828          229 FGLSIFFKPGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRG--------  298 (586)
Q Consensus       229 fg~a~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~--------  298 (586)
                      ||+++...........+||+.|+|||++.+  .|+.++|||||||++|+|++|.+||.+.+..+.+..+.+.        
T Consensus       201 FG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~  280 (420)
T 1j1b_A          201 FGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ  280 (420)
T ss_dssp             CTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred             chhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence            999987765555566789999999999853  6899999999999999999999999998876666555431        


Q ss_pred             ---------ccCCCC---CC-----CCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          299 ---------KIDFER---DP-----WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       299 ---------~~~~~~---~~-----~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                               .+.++.   .+     .+.+++++++||.+||..||.+|||+.|+|+||||+..
T Consensus       281 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~  343 (420)
T 1j1b_A          281 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  343 (420)
T ss_dssp             HHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             HHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence                     111111   11     13568999999999999999999999999999999753

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=8.5e-47  Score=383.02  Aligned_cols=255  Identities=28%  Similarity=0.475  Sum_probs=208.7

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC--
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD--  155 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~--  155 (586)
                      .+.++|++++.||+|+||.||+|++..+|+.||+|++....  .....+.+.+|+.+++++ +||||+++++++.+..  
T Consensus         3 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~   79 (332)
T 3qd2_B            3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKL-EHPGIVRYFNAWLETPPE   79 (332)
T ss_dssp             HHHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSC-CCTTBCCEEEEEEECCSC
T ss_pred             hhhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhC-CCCCEeeEEEEEEEeccc
Confidence            34578999999999999999999999999999999997654  233457899999999999 8999999999986543  


Q ss_pred             -------------------------------------------------------eEEEEEeccCCCChHHHHHhCCC--
Q 043828          156 -------------------------------------------------------AIYLVMELCEGGELFDRIVNKGH--  178 (586)
Q Consensus       156 -------------------------------------------------------~~~iv~E~~~gg~L~~~l~~~~~--  178 (586)
                                                                             .+|+|||||+|++|.+++.....  
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~  159 (332)
T 3qd2_B           80 KWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLE  159 (332)
T ss_dssp             HHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGG
T ss_pred             hhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCcc
Confidence                                                                   38999999999999999987543  


Q ss_pred             -CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC-------------ceecc
Q 043828          179 -YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-------------QFCEI  244 (586)
Q Consensus       179 -~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~-------------~~~~~  244 (586)
                       .++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.......             .....
T Consensus       160 ~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~  236 (332)
T 3qd2_B          160 DREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQ  236 (332)
T ss_dssp             GSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTCEECSCC--------------CCCSC
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEE---eCCCCEEEeecCcccccccchhhcccccccccccccccc
Confidence             4566789999999999999999999999999999999   567899999999998765432             22345


Q ss_pred             cCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccC
Q 043828          245 VGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLD  323 (586)
Q Consensus       245 ~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~  323 (586)
                      .||+.|+|||++.+ .++.++|||||||++|+|++|..|+..  .......+......   ..+...++.+.+||.+||+
T Consensus       237 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~  311 (332)
T 3qd2_B          237 VGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNLKFP---LLFTQKYPQEHMMVQDMLS  311 (332)
T ss_dssp             C-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTTCCC---HHHHHHCHHHHHHHHHHHC
T ss_pred             CCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhccCCC---cccccCChhHHHHHHHHcc
Confidence            79999999999874 689999999999999999999877522  12222333333221   1123457889999999999


Q ss_pred             CCCCCCCCHHHHhcCCCccC
Q 043828          324 PNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       324 ~dp~~Rps~~eil~hp~~~~  343 (586)
                      .||.+|||+.|+|+||||++
T Consensus       312 ~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          312 PSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             SSGGGSCCHHHHHHSTTCCC
T ss_pred             CCCCcCCCHHHHhhchhhhc
Confidence            99999999999999999985

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-46  Score=384.52  Aligned_cols=262  Identities=27%  Similarity=0.388  Sum_probs=214.0

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCC--hhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT--EIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~--~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      ...++|++++.||+|+||.||+|.+..+|+.||+|++.......  ......+.+|+.+++.+ +||||+++++++.+.+
T Consensus         7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~   85 (346)
T 1ua2_A            7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKS   85 (346)
T ss_dssp             ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTT
T ss_pred             HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-CCCCCCeEEEEEeeCC
Confidence            34578999999999999999999999999999999987543221  11124678899999999 8999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      .+|+||||+++ +|..++... ..+++..+..++.|++.||.|||++||+||||||+|||+   +.++.+||+|||++..
T Consensus        86 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~a~~  161 (346)
T 1ua2_A           86 NISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKS  161 (346)
T ss_dssp             CCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCCGGGST
T ss_pred             ceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEE---cCCCCEEEEeccccee
Confidence            99999999976 888888664 468999999999999999999999999999999999999   5678999999999987


Q ss_pred             cCC-CCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCC-----
Q 043828          235 FKP-GEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP-----  306 (586)
Q Consensus       235 ~~~-~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~-----  306 (586)
                      ... ........||+.|+|||++.+  .++.++|||||||++|+|++|.+||.+.+.......+...........     
T Consensus       162 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  241 (346)
T 1ua2_A          162 FGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMC  241 (346)
T ss_dssp             TTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTT
T ss_pred             ccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhc
Confidence            643 233445689999999999853  478899999999999999999999999888877777665322211111     


Q ss_pred             -------------------CCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          307 -------------------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       307 -------------------~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                         +..++..+.+||.+||..||.+|||+.|+|+||||++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~  298 (346)
T 1ua2_A          242 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR  298 (346)
T ss_dssp             SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred             cCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcC
Confidence                               14567899999999999999999999999999999864

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.6e-47  Score=388.45  Aligned_cols=259  Identities=28%  Similarity=0.530  Sum_probs=218.5

Q ss_pred             cccCeeecceeccCCceEEEEEEEc---cCCcEEEEEEeeccccC-ChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEI---ETGETYACKKIAKEKLK-TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~~avK~i~~~~~~-~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      ..++|++++.||+|+||.||+|++.   .+|+.||+|++.+.... .....+.+.+|+.+++.+.+||||+++++++...
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  131 (355)
T 1vzo_A           52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE  131 (355)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET
T ss_pred             cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC
Confidence            3479999999999999999999884   58999999998754321 1122345677999999996799999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          155 DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      ..+|+|||||++++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++..
T Consensus       132 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~DfG~a~~  208 (355)
T 1vzo_A          132 TKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKE  208 (355)
T ss_dssp             TEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEESCSSEEEE
T ss_pred             ceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCcEEEeeCCCCee
Confidence            9999999999999999999988889999999999999999999999999999999999999   6778999999999976


Q ss_pred             cCCC--CceecccCCccccchhhhhc---cCCCcchHHHHHHHHHHHhhCCCCCCCC----CHHHHHHHHHhCccCCCCC
Q 043828          235 FKPG--EQFCEIVGSPYYMAPEVLRR---NYGPEIDVWSAGVIIYILLCGVPPFWAE----TEEGIAHAIIRGKIDFERD  305 (586)
Q Consensus       235 ~~~~--~~~~~~~gt~~y~aPE~l~~---~~~~~~DiwslG~il~~ll~g~~pf~~~----~~~~~~~~i~~~~~~~~~~  305 (586)
                      ....  ......+||+.|+|||++.+   .++.++|||||||++|+|++|..||...    ....+...+......++  
T Consensus       209 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--  286 (355)
T 1vzo_A          209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP--  286 (355)
T ss_dssp             CCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCC--
T ss_pred             cccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCCC--
Confidence            5322  22345689999999999963   4788999999999999999999999743    34445555555443332  


Q ss_pred             CCCCCCHHHHHHHHHccCCCCCCCC-----CHHHHhcCCCccCC
Q 043828          306 PWPKVSKEAKELVKNMLDPNPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       306 ~~~~~~~~~~~li~~~L~~dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                        ..++..+.+||.+||..||.+||     |++++++||||+..
T Consensus       287 --~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          287 --QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             --TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             --cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence              46889999999999999999999     99999999999864

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=3e-46  Score=372.37  Aligned_cols=261  Identities=26%  Similarity=0.395  Sum_probs=220.0

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .+.++|++++.||+|+||.||+|.+..++..||+|++...........+.+.+|+.+++++ +||||+++++++...+.+
T Consensus         8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~   86 (294)
T 4eqm_A            8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-SHQNIVSMIDVDEEDDCY   86 (294)
T ss_dssp             CEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-CBTTBCCEEEEEECSSEE
T ss_pred             HhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-CCCCCceEEEeeeeCCeE
Confidence            3457899999999999999999999999999999999776555555667899999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |+||||++|++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||++.....
T Consensus        87 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~  163 (294)
T 4eqm_A           87 YLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKALSE  163 (294)
T ss_dssp             EEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCSSSTTC--
T ss_pred             EEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE---CCCCCEEEEeCCCcccccc
Confidence            9999999999999999988899999999999999999999999999999999999999   5678999999999987643


Q ss_pred             CC--ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCC-CCCCCCCCCHH
Q 043828          238 GE--QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF-ERDPWPKVSKE  313 (586)
Q Consensus       238 ~~--~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~  313 (586)
                      ..  ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+............... +....+.+++.
T Consensus       164 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (294)
T 4eqm_A          164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQS  243 (294)
T ss_dssp             -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHH
T ss_pred             ccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHH
Confidence            32  2334679999999999874 68889999999999999999999999988877666555544322 12234578999


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhcCCCcc
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLENPWIK  342 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~hp~~~  342 (586)
                      +.++|.+||.+||.+||+..+.+.++|..
T Consensus       244 l~~li~~~l~~dp~~R~~~~~~l~~~l~~  272 (294)
T 4eqm_A          244 LSNVILRATEKDKANRYKTIQEMKDDLSS  272 (294)
T ss_dssp             HHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred             HHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence            99999999999999999555666665543

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=1.3e-46  Score=381.60  Aligned_cols=261  Identities=26%  Similarity=0.439  Sum_probs=217.9

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ...++|++++.||+|+||.||+|++..+|+.||+|++..... .......+.+|+.+++++ +||||+++++++.+.+.+
T Consensus        22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~   99 (331)
T 4aaa_A           22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD-DKMVKKIAMREIKLLKQL-RHENLVNLLEVCKKKKRW   99 (331)
T ss_dssp             BCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS-CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEE
T ss_pred             hhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCC-chHHHHHHHHHHHHHhhC-CCCCEeeEEEEeecCCEE
Confidence            345799999999999999999999999999999999876542 233346678999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |+||||+++++|..++.....+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.....
T Consensus       100 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~  176 (331)
T 4aaa_A          100 YLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAA  176 (331)
T ss_dssp             EEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCTTC-----
T ss_pred             EEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEE---cCCCcEEEEeCCCceeecC
Confidence            9999999999998887777889999999999999999999999999999999999999   5678999999999976543


Q ss_pred             C-CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc--------------
Q 043828          238 G-EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI--------------  300 (586)
Q Consensus       238 ~-~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~--------------  300 (586)
                      . .......||+.|+|||++.+  .++.++|||||||++|+|++|..||...+.......+.....              
T Consensus       177 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (331)
T 4aaa_A          177 PGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP  256 (331)
T ss_dssp             -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred             CccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcc
Confidence            2 33345679999999999864  588999999999999999999999998887766555432111              


Q ss_pred             -----CCCC--------CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          301 -----DFER--------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       301 -----~~~~--------~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                           ..+.        ..++.+++.+.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~  312 (331)
T 4aaa_A          257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQM  312 (331)
T ss_dssp             GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHG
T ss_pred             ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhcc
Confidence                 0000        012467899999999999999999999999999999985

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.8e-46  Score=386.51  Aligned_cols=258  Identities=26%  Similarity=0.424  Sum_probs=206.9

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC--
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD--  155 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~--  155 (586)
                      .+.++|++++.||+|+||.||+|.+..+|+.||+|++.... ........+.+|+.+++.+ +||||+++++++....  
T Consensus        22 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~   99 (371)
T 2xrw_A           22 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSL   99 (371)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT-SSHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSCCST
T ss_pred             chhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc-CChHHHHHHHHHHHHHHhc-CCCCccceEEeecccccc
Confidence            35679999999999999999999999999999999997643 2334456788999999999 8999999999997665  


Q ss_pred             ----eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          156 ----AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       156 ----~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                          .+|+|||||++ +|.+.+.  ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+
T Consensus       100 ~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~---~~~~~~kl~Dfg~  173 (371)
T 2xrw_A          100 EEFQDVYIVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGL  173 (371)
T ss_dssp             TTCCEEEEEEECCSE-EHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCCCC
T ss_pred             ccccceEEEEEcCCC-CHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE---cCCCCEEEEEeec
Confidence                78999999975 7888775  458999999999999999999999999999999999999   5678999999999


Q ss_pred             ccccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCC------
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER------  304 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~------  304 (586)
                      +............+||+.|+|||++.+ .|+.++|||||||++|+|++|..||.+.+.......+.........      
T Consensus       174 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  253 (371)
T 2xrw_A          174 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL  253 (371)
T ss_dssp             ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTS
T ss_pred             ccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence            987655444556789999999999864 6899999999999999999999999998887777666543221100      


Q ss_pred             -----------CC--------------CCC-------CCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          305 -----------DP--------------WPK-------VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       305 -----------~~--------------~~~-------~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                                 +.              ++.       .+..+++||.+||..||.+|||++|+|+||||+.
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  324 (371)
T 2xrw_A          254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  324 (371)
T ss_dssp             CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhh
Confidence                       00              000       1467899999999999999999999999999975

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4.1e-46  Score=385.73  Aligned_cols=254  Identities=30%  Similarity=0.479  Sum_probs=212.8

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe-----
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED-----  153 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~-----  153 (586)
                      ..++|++++.||+|+||+||+|++..+|+.||+|++......       ..+|+.+++.+ +||||+++++++..     
T Consensus         5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-------~~~E~~il~~l-~hpnIv~l~~~~~~~~~~~   76 (383)
T 3eb0_A            5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-------KNRELDIMKVL-DHVNIIKLVDYFYTTGDEE   76 (383)
T ss_dssp             -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS-------CCHHHHHHTTC-CCTTBCCEEEEEEEC----
T ss_pred             ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch-------HHHHHHHHHHc-CCCCccchhheeeecCccc
Confidence            346899999999999999999999999999999998654321       24699999999 89999999999844     


Q ss_pred             ---------------------------------CCeEEEEEeccCCCChHHHHH----hCCCCCHHHHHHHHHHHHHHHH
Q 043828          154 ---------------------------------KDAIYLVMELCEGGELFDRIV----NKGHYTERAAAAVGKTILRIVK  196 (586)
Q Consensus       154 ---------------------------------~~~~~iv~E~~~gg~L~~~l~----~~~~~~~~~~~~i~~qi~~~l~  196 (586)
                                                       ...+++||||+++ +|.+.+.    ....+++..++.++.||+.||.
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~  155 (383)
T 3eb0_A           77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG  155 (383)
T ss_dssp             ---------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                                             3448999999985 7766654    4577999999999999999999


Q ss_pred             HHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHH
Q 043828          197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIY  274 (586)
Q Consensus       197 ~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~  274 (586)
                      |||++||+||||||+|||++  ..++.+||+|||+|.............||+.|+|||++.+  .|+.++||||+||++|
T Consensus       156 ~LH~~gi~H~Dikp~Nil~~--~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  233 (383)
T 3eb0_A          156 FIHSLGICHRDIKPQNLLVN--SKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFG  233 (383)
T ss_dssp             HHHTTTEECSCCCGGGEEEE--TTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred             HHHHCcCccCccCHHHEEEc--CCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHH
Confidence            99999999999999999995  2467899999999988766666667789999999999864  4899999999999999


Q ss_pred             HHhhCCCCCCCCCHHHHHHHHHhCc-----------------cCCCCC--------CCCCCCHHHHHHHHHccCCCCCCC
Q 043828          275 ILLCGVPPFWAETEEGIAHAIIRGK-----------------IDFERD--------PWPKVSKEAKELVKNMLDPNPYNR  329 (586)
Q Consensus       275 ~ll~g~~pf~~~~~~~~~~~i~~~~-----------------~~~~~~--------~~~~~~~~~~~li~~~L~~dp~~R  329 (586)
                      +|++|.+||.+.+..+....+....                 ..++..        ....+++.+.+||.+||..||.+|
T Consensus       234 ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  313 (383)
T 3eb0_A          234 ELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLR  313 (383)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGS
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhC
Confidence            9999999999988877766664311                 111110        113478899999999999999999


Q ss_pred             CCHHHHhcCCCccC
Q 043828          330 LTLEEVLENPWIKN  343 (586)
Q Consensus       330 ps~~eil~hp~~~~  343 (586)
                      ||+.|+|+||||+.
T Consensus       314 ~t~~e~l~hp~f~~  327 (383)
T 3eb0_A          314 INPYEAMAHPFFDH  327 (383)
T ss_dssp             CCHHHHHTSGGGHH
T ss_pred             CCHHHHhcCHHHHH
Confidence            99999999999975

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=4.6e-46  Score=367.50  Aligned_cols=258  Identities=28%  Similarity=0.521  Sum_probs=220.3

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      +.++|++.+.||+|+||.||+|.+..+++.||+|++......  ...+.+.+|+.+++.+ +||||+++++++.+.+..|
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   81 (276)
T 2yex_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML-NHENVVKFYGHRREGNIQY   81 (276)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT--THHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEE
T ss_pred             eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch--hhhHHHHHHHHHHHhc-CCCCceeeeeEEEcCCEEE
Confidence            457899999999999999999999999999999999765432  2346789999999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      +||||+++++|.+++.....+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||++......
T Consensus        82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~~~  158 (276)
T 2yex_A           82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYN  158 (276)
T ss_dssp             EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCEECEET
T ss_pred             EEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEE---ccCCCEEEeeCCCccccCCC
Confidence            999999999999998877789999999999999999999999999999999999999   56789999999999765322


Q ss_pred             C---ceecccCCccccchhhhhc-c-CCCcchHHHHHHHHHHHhhCCCCCCCCCHH-HHHHHHHhCccCCCCCCCCCCCH
Q 043828          239 E---QFCEIVGSPYYMAPEVLRR-N-YGPEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       239 ~---~~~~~~gt~~y~aPE~l~~-~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      .   ......||+.|+|||++.+ . ++.++|||||||++|+|++|..||...... .....+......  ...+..++.
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  236 (276)
T 2yex_A          159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY--LNPWKKIDS  236 (276)
T ss_dssp             TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT--STTGGGSCH
T ss_pred             cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc--cCchhhcCH
Confidence            2   2335679999999999864 3 467899999999999999999999875543 223333333222  223467899


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .+.+||.+||..||.+|||+.++++||||+..
T Consensus       237 ~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~  268 (276)
T 2yex_A          237 APLALLHKILVENPSARITIPDIKKDRWYNKP  268 (276)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             HHHHHHHHHCCCCchhCCCHHHHhcCccccCh
Confidence            99999999999999999999999999999864

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=2.3e-45  Score=364.72  Aligned_cols=257  Identities=24%  Similarity=0.355  Sum_probs=214.7

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++....... .....+.+|+.++..+.+||||+++++++.+.+.+
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~   86 (289)
T 1x8b_A            8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS-VDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHM   86 (289)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTS-HHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEE
T ss_pred             cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccccc-HHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeE
Confidence            45578999999999999999999999999999999998654333 33567888999999988899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCC--------------
Q 043828          158 YLVMELCEGGELFDRIVNK----GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS--------------  219 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~--------------  219 (586)
                      ++||||++|++|.+++...    ..+++..++.++.||+.||.|||++||+||||||+||+++...              
T Consensus        87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~  166 (289)
T 1x8b_A           87 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW  166 (289)
T ss_dssp             EEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------------
T ss_pred             EEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence            9999999999999999764    6799999999999999999999999999999999999995322              


Q ss_pred             --CCCceEEeecccccccCCCCceecccCCccccchhhhhcc--CCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHH
Q 043828          220 --ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAI  295 (586)
Q Consensus       220 --~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i  295 (586)
                        ....+||+|||.+.......   ...||+.|+|||++.+.  ++.++|||||||++|+|++|.+|+....   ....+
T Consensus       167 ~~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~~~~  240 (289)
T 1x8b_A          167 ASNKVMFKIGDLGHVTRISSPQ---VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---QWHEI  240 (289)
T ss_dssp             ---CCCEEECCCTTCEETTCSC---CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---HHHHH
T ss_pred             cCCceEEEEcccccccccCCcc---ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---HHHHH
Confidence              45589999999998765432   34599999999999753  5578999999999999999998875543   23344


Q ss_pred             HhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          296 IRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ..+....   ....+++.+.+||.+||..||.+|||+.++++||||+..
T Consensus       241 ~~~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  286 (289)
T 1x8b_A          241 RQGRLPR---IPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA  286 (289)
T ss_dssp             HTTCCCC---CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred             HcCCCCC---CCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence            4443321   224689999999999999999999999999999999864

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=2.3e-46  Score=380.36  Aligned_cols=258  Identities=37%  Similarity=0.705  Sum_probs=191.6

Q ss_pred             CcccCeeecc-eeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe---
Q 043828           78 NILDKYTFGK-ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED---  153 (586)
Q Consensus        78 ~~~~~y~~~~-~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~---  153 (586)
                      .+.++|.+.+ .||+|+||+||+|++..+|+.||+|++...        ....+|+..+.++.+||||+++++++..   
T Consensus        25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~   96 (336)
T 3fhr_A           25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS--------PKARQEVDHHWQASGGPHIVCILDVYENMHH   96 (336)
T ss_dssp             CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred             cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc--------HHHHHHHHHHHHhcCCCChHHHHHHHhhccC
Confidence            4567999965 699999999999999999999999998653        1233444443333499999999999976   


Q ss_pred             -CCeEEEEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecc
Q 043828          154 -KDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG  230 (586)
Q Consensus       154 -~~~~~iv~E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg  230 (586)
                       ...+|+|||||+||+|.+++....  .+++..++.++.||+.||.|||++||+||||||+||++...+..+.+||+|||
T Consensus        97 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg  176 (336)
T 3fhr_A           97 GKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG  176 (336)
T ss_dssp             TEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred             CCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccc
Confidence             456899999999999999998753  69999999999999999999999999999999999999654456779999999


Q ss_pred             cccccCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHH----HHHHHhCccCCCCC
Q 043828          231 LSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGI----AHAIIRGKIDFERD  305 (586)
Q Consensus       231 ~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~----~~~i~~~~~~~~~~  305 (586)
                      ++...... ......||+.|+|||++. ..++.++|||||||++|+|++|..||........    ...+......++.+
T Consensus       177 ~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (336)
T 3fhr_A          177 FAKETTQN-ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNP  255 (336)
T ss_dssp             TCEEC-----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTT
T ss_pred             cceecccc-ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCch
Confidence            99865432 234567899999999985 4688899999999999999999999977655443    33344455566666


Q ss_pred             CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       306 ~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .+..++..+.+||.+||..||.+|||+.|+|+||||+..
T Consensus       256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          256 EWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred             hhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence            677899999999999999999999999999999999864

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.2e-45  Score=376.44  Aligned_cols=256  Identities=29%  Similarity=0.476  Sum_probs=210.1

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCC-CCeeEEEEEEEeCCeEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH-PNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~h-pnIv~l~~~~~~~~~~~  158 (586)
                      .++|++++.||+|+||.||+|.+ .+++.||+|++..... .....+.+.+|+.+|+.+..| |||+++++++.....+|
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~   85 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY   85 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeecccc-chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE
Confidence            45799999999999999999987 5688999999976543 334457789999999999432 99999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||+ .+++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+.    ++.+||+|||++......
T Consensus        86 lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~----~~~~kl~DFG~a~~~~~~  160 (343)
T 3dbq_A           86 MVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPD  160 (343)
T ss_dssp             EEECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TTEEEECCCSSSCCC---
T ss_pred             EEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE----CCcEEEeecccccccCcc
Confidence            99994 5889999999988999999999999999999999999999999999999994    467999999999876433


Q ss_pred             Cc---eecccCCccccchhhhh------------ccCCCcchHHHHHHHHHHHhhCCCCCCCCC-HHHHHHHHHhCccCC
Q 043828          239 EQ---FCEIVGSPYYMAPEVLR------------RNYGPEIDVWSAGVIIYILLCGVPPFWAET-EEGIAHAIIRGKIDF  302 (586)
Q Consensus       239 ~~---~~~~~gt~~y~aPE~l~------------~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~~i~~~~~~~  302 (586)
                      ..   ....+||+.|+|||++.            ..++.++|||||||++|+|++|..||.... .......+.......
T Consensus       161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~  240 (343)
T 3dbq_A          161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI  240 (343)
T ss_dssp             ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCC
T ss_pred             cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCccc
Confidence            22   23567999999999985            357889999999999999999999997643 333444444433322


Q ss_pred             CCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          303 ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       303 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ..+  ...+..+.+||.+||..||.+|||+.|+|+||||+..
T Consensus       241 ~~~--~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  280 (343)
T 3dbq_A          241 EFP--DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  280 (343)
T ss_dssp             CCC--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSC
T ss_pred             CCc--ccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccccc
Confidence            222  3457899999999999999999999999999999854

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=7.3e-46  Score=388.83  Aligned_cols=259  Identities=26%  Similarity=0.425  Sum_probs=213.8

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCC-----CCCCeeEEEEEE
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP-----KHPNIVTYKEAY  151 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-----~hpnIv~l~~~~  151 (586)
                      ..+..+|++++.||+|+||.||+|.+..+++.||+|++....    .....+.+|+.+++.+.     +||||+++++++
T Consensus        93 ~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~  168 (429)
T 3kvw_A           93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK----RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENF  168 (429)
T ss_dssp             CEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEE
T ss_pred             CcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc----chHHHHHHHHHHHHHHhhccccCCcCEEEEEeec
Confidence            345678999999999999999999999999999999996532    23456778888888772     577999999999


Q ss_pred             EeCCeEEEEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCc--eEEe
Q 043828          152 EDKDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQ--LKAI  227 (586)
Q Consensus       152 ~~~~~~~iv~E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~--vkl~  227 (586)
                      .....+|+||||+. ++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++   ..+.  +||+
T Consensus       169 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~---~~~~~~vkL~  244 (429)
T 3kvw_A          169 TFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLK---QQGRSGIKVI  244 (429)
T ss_dssp             EETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEES---STTSCCEEEC
T ss_pred             ccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEc---cCCCcceEEe
Confidence            99999999999996 69999887653  499999999999999999999999999999999999994   4444  9999


Q ss_pred             ecccccccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCC--
Q 043828          228 DFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER--  304 (586)
Q Consensus       228 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~--  304 (586)
                      |||++.....  .....+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+..+....+.......+.  
T Consensus       245 DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~  322 (429)
T 3kvw_A          245 DFGSSCYEHQ--RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKL  322 (429)
T ss_dssp             CCTTCEETTC--CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHH
T ss_pred             ecccceecCC--cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence            9999976432  3345689999999999864 6999999999999999999999999998887766655431100000  


Q ss_pred             --------------------------------------------C----C-----CCCCCHHHHHHHHHccCCCCCCCCC
Q 043828          305 --------------------------------------------D----P-----WPKVSKEAKELVKNMLDPNPYNRLT  331 (586)
Q Consensus       305 --------------------------------------------~----~-----~~~~~~~~~~li~~~L~~dp~~Rps  331 (586)
                                                                  .    .     ....++.+.+||.+||+.||.+|||
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpt  402 (429)
T 3kvw_A          323 LDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMT  402 (429)
T ss_dssp             HHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCC
Confidence                                                        0    0     0123788999999999999999999


Q ss_pred             HHHHhcCCCccCCC
Q 043828          332 LEEVLENPWIKNDN  345 (586)
Q Consensus       332 ~~eil~hp~~~~~~  345 (586)
                      +.|+|+||||+...
T Consensus       403 a~e~L~Hpw~~~~~  416 (429)
T 3kvw_A          403 PGQALRHPWLRRRL  416 (429)
T ss_dssp             HHHHHTSTTTC---
T ss_pred             HHHHhCChhhccCC
Confidence            99999999998754

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=1.9e-46  Score=385.01  Aligned_cols=258  Identities=26%  Similarity=0.451  Sum_probs=201.9

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC---
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK---  154 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~---  154 (586)
                      .+.++|++++.||+|+||.||+|.+..+|+.||+|++.... ........+.+|+.+++.+ +||||+++++++...   
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~  103 (367)
T 2fst_X           26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSL  103 (367)
T ss_dssp             EEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT-SSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSG
T ss_pred             CCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecCCcc
Confidence            44579999999999999999999999999999999986543 2334456788999999999 899999999999754   


Q ss_pred             ---CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          155 ---DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       155 ---~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                         ..+|+|+||+ +++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+
T Consensus       104 ~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---~~~~~~kL~DFG~  178 (367)
T 2fst_X          104 EEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGL  178 (367)
T ss_dssp             GGCCCCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECC---
T ss_pred             ccCCeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEE---CCCCCEEEeeccc
Confidence               5689999999 7899888765 579999999999999999999999999999999999999   5678999999999


Q ss_pred             ccccCCCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccC--------
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID--------  301 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--------  301 (586)
                      +.....  .....+||+.|+|||++.+  .|+.++|||||||++|+|++|.+||.+.+.......+......        
T Consensus       179 a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~  256 (367)
T 2fst_X          179 ARHTAD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK  256 (367)
T ss_dssp             --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred             cccccc--cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence            986543  2345689999999999864  6899999999999999999999999998877766665432111        


Q ss_pred             ---------------CCCC----CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          302 ---------------FERD----PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       302 ---------------~~~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                     .+..    .++.+++.+.+||.+||..||.+|||+.|+|+||||+..
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~  318 (367)
T 2fst_X          257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY  318 (367)
T ss_dssp             CCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             hhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhc
Confidence                           0111    124578899999999999999999999999999999864

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=7.8e-46  Score=380.54  Aligned_cols=257  Identities=25%  Similarity=0.385  Sum_probs=218.1

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++.+.||+|+||.||+|.+..+|..||+|++....  .......+.+|+.+++.+ +||||+++++++.+.+.+|
T Consensus        31 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~  107 (360)
T 3eqc_A           31 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEIS  107 (360)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEETTEEE
T ss_pred             ccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHC-CCCCEEEEeEEEEECCEEE
Confidence            4578999999999999999999999999999999997653  334457789999999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN-GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      +||||++|++|.+++...+.+++..+..++.|++.||.|||+. ||+||||||+||++   +.++.+||+|||++.....
T Consensus       108 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~  184 (360)
T 3eqc_A          108 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLID  184 (360)
T ss_dssp             EEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE---CTTCCEEECCCCCCHHHHH
T ss_pred             EEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEE---CCCCCEEEEECCCCccccc
Confidence            9999999999999999888899999999999999999999996 99999999999999   5678999999999875432


Q ss_pred             CCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHH---------------------
Q 043828          238 GEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAI---------------------  295 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i---------------------  295 (586)
                      . ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...+.......+                     
T Consensus       185 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (360)
T 3eqc_A          185 S-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP  263 (360)
T ss_dssp             H-C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------
T ss_pred             c-cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCc
Confidence            2 2234679999999999874 6899999999999999999999999877655432221                     


Q ss_pred             ---------------------HhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          296 ---------------------IRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       296 ---------------------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                           ....  .+..+...++.++.+||.+||..||.+|||+.|+|+||||+..
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  331 (360)
T 3eqc_A          264 LNKFGMDSRPPMAIFELLDYIVNEP--PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  331 (360)
T ss_dssp             ----------CCCHHHHHHHHHHSC--CCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             ccccccCCCCcccchhhhhHHhccC--CCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence                                 1111  1112223578999999999999999999999999999999853

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=6.5e-46  Score=374.59  Aligned_cols=258  Identities=24%  Similarity=0.396  Sum_probs=213.8

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC--e
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD--A  156 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~--~  156 (586)
                      ..++|++.+.||+|+||+||+|.+..+|+.||+|++.......  ..+.+.+|+.+++++ +||||+++++++....  .
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~   83 (319)
T 4euu_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR--PVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRH   83 (319)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS--CHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCC
T ss_pred             CCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccc--hHHHHHHHHHHHHhc-CCCCcceEEEEeecCCCce
Confidence            3468999999999999999999999999999999997654322  356788999999999 8999999999998765  7


Q ss_pred             EEEEEeccCCCChHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEee-cCCCCCceEEeecccc
Q 043828          157 IYLVMELCEGGELFDRIVNKG---HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA-DGSENSQLKAIDFGLS  232 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~-~~~~~~~vkl~Dfg~a  232 (586)
                      +|+||||+++++|.+++....   .+++..++.++.||+.||.|||++||+||||||+|||+. ..+..+.+||+|||++
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a  163 (319)
T 4euu_A           84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA  163 (319)
T ss_dssp             EEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred             EEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence            899999999999999997643   399999999999999999999999999999999999973 2245667999999999


Q ss_pred             cccCCCCceecccCCccccchhhhh---------ccCCCcchHHHHHHHHHHHhhCCCCCCCCC----HHHHHHHHHhCc
Q 043828          233 IFFKPGEQFCEIVGSPYYMAPEVLR---------RNYGPEIDVWSAGVIIYILLCGVPPFWAET----EEGIAHAIIRGK  299 (586)
Q Consensus       233 ~~~~~~~~~~~~~gt~~y~aPE~l~---------~~~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~~~~i~~~~  299 (586)
                      .............||+.|+|||++.         ..++.++|||||||++|+|++|..||....    ..+....+..+.
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  243 (319)
T 4euu_A          164 RELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK  243 (319)
T ss_dssp             EECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC
T ss_pred             eecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC
Confidence            8877666666778999999999985         457889999999999999999999996432    234444444432


Q ss_pred             cC-------------------CCC--CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCC
Q 043828          300 ID-------------------FER--DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENP  339 (586)
Q Consensus       300 ~~-------------------~~~--~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp  339 (586)
                      ..                   ++.  .....++..+.+||.+||+.||.+|||++|+|+||
T Consensus       244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence            21                   000  11122456789999999999999999999999986

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.7e-45  Score=369.48  Aligned_cols=258  Identities=28%  Similarity=0.486  Sum_probs=216.4

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe----
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED----  153 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~----  153 (586)
                      ...++|++++.||+|+||.||+|++..+|+.||+|++.....    ....+.+|+.+++++.+||||+++++++..    
T Consensus        21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~   96 (326)
T 2x7f_A           21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP   96 (326)
T ss_dssp             CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred             CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc----cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence            345789999999999999999999999999999999975432    236788999999999789999999999987    


Q ss_pred             --CCeEEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeec
Q 043828          154 --KDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDF  229 (586)
Q Consensus       154 --~~~~~iv~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Df  229 (586)
                        ...+|+||||+++++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+||
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~---~~~~~~kl~Df  173 (326)
T 2x7f_A           97 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDF  173 (326)
T ss_dssp             CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---CTTCCEEECCC
T ss_pred             cccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEE---cCCCCEEEeeC
Confidence              56899999999999999999764  569999999999999999999999999999999999999   56789999999


Q ss_pred             ccccccCCC-CceecccCCccccchhhhh------ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCC
Q 043828          230 GLSIFFKPG-EQFCEIVGSPYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF  302 (586)
Q Consensus       230 g~a~~~~~~-~~~~~~~gt~~y~aPE~l~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~  302 (586)
                      |++...... .......||+.|+|||++.      ..++.++|||||||++|+|++|..||...........+...... 
T Consensus       174 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-  252 (326)
T 2x7f_A          174 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAP-  252 (326)
T ss_dssp             TTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC-
T ss_pred             cCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccc-
Confidence            998765432 2234467999999999984      35889999999999999999999999988877766666554332 


Q ss_pred             CCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          303 ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       303 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                       ......++..+.+||.+||..||.+|||+.++++||||+..
T Consensus       253 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~  293 (326)
T 2x7f_A          253 -RLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQ  293 (326)
T ss_dssp             -CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCC
T ss_pred             -cCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhC
Confidence             22235689999999999999999999999999999999864

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=1.5e-45  Score=379.11  Aligned_cols=252  Identities=27%  Similarity=0.399  Sum_probs=215.7

Q ss_pred             cccCeeecceeccCCceEEEEEEEc-------cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEI-------ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAY  151 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~-------~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~  151 (586)
                      ..++|++++.||+|+||.||+|.+.       .++..||+|++....  .....+.+.+|+.+++.+.+||||+++++++
T Consensus        79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~  156 (370)
T 2psq_A           79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC  156 (370)
T ss_dssp             CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred             cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence            4578999999999999999999875       345679999986553  2334567899999999997899999999999


Q ss_pred             EeCCeEEEEEeccCCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEe
Q 043828          152 EDKDAIYLVMELCEGGELFDRIVNKG----------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLF  215 (586)
Q Consensus       152 ~~~~~~~iv~E~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill  215 (586)
                      .+.+.+|+||||+++|+|.+++....                .+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus       157 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll  236 (370)
T 2psq_A          157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV  236 (370)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE
T ss_pred             ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEE
Confidence            99999999999999999999998653                47899999999999999999999999999999999999


Q ss_pred             ecCCCCCceEEeecccccccCCCC---ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHH
Q 043828          216 ADGSENSQLKAIDFGLSIFFKPGE---QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEG  290 (586)
Q Consensus       216 ~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~  290 (586)
                         +.++.+||+|||++.......   ......||+.|+|||++. ..|+.++|||||||++|+|++ |..||.+....+
T Consensus       237 ---~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~  313 (370)
T 2psq_A          237 ---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE  313 (370)
T ss_dssp             ---CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred             ---CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence               677899999999998654332   223356788999999986 468999999999999999999 999999888777


Q ss_pred             HHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          291 IAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       291 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +...+..+...   .....++..+.+||.+||..||.+|||+.|++++
T Consensus       314 ~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          314 LFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             HHHHHHTTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhcCCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            77776665422   1224688999999999999999999999999874

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=2.6e-47  Score=393.81  Aligned_cols=250  Identities=17%  Similarity=0.218  Sum_probs=204.9

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCC--CCCCeeEEE-------E
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP--KHPNIVTYK-------E  149 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~--~hpnIv~l~-------~  149 (586)
                      ..++|++.+.||+|+||.||+|++..+|+.||||++...........+.+.+|+.+++.+.  +|||||+++       +
T Consensus        71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~  150 (377)
T 3byv_A           71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  150 (377)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred             CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence            3578999999999999999999998999999999998765555555678999995555443  799999988       7


Q ss_pred             EEEeCCe-----------------EEEEEeccCCCChHHHHHhCCCCCH-------HHHHHHHHHHHHHHHHHHHcCcee
Q 043828          150 AYEDKDA-----------------IYLVMELCEGGELFDRIVNKGHYTE-------RAAAAVGKTILRIVKVCHENGVMH  205 (586)
Q Consensus       150 ~~~~~~~-----------------~~iv~E~~~gg~L~~~l~~~~~~~~-------~~~~~i~~qi~~~l~~lH~~~ivH  205 (586)
                      ++++.+.                 .||||||+ +|+|.+++...+.+++       ..+..++.||+.||.|||++||+|
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH  229 (377)
T 3byv_A          151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH  229 (377)
T ss_dssp             EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            7776643                 89999999 6799999987555555       788889999999999999999999


Q ss_pred             ccCCCCceEeecCCCCCceEEeecccccccCCCCceecccCCccccchhhhhc------------cCCCcchHHHHHHHH
Q 043828          206 RDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR------------NYGPEIDVWSAGVII  273 (586)
Q Consensus       206 rDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~------------~~~~~~DiwslG~il  273 (586)
                      |||||+|||+   +.++.+||+|||++....  ......+| +.|+|||++.+            .|+.++|||||||++
T Consensus       230 rDikp~NIll---~~~~~~kL~DFG~a~~~~--~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il  303 (377)
T 3byv_A          230 TYLRPVDIVL---DQRGGVFLTGFEHLVRDG--ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI  303 (377)
T ss_dssp             SCCCGGGEEE---CTTCCEEECCGGGCEETT--CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred             CCCCHHHEEE---cCCCCEEEEechhheecC--CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence            9999999999   567899999999998643  34456678 99999999864            589999999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          274 YILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       274 ~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      |+|++|..||.+.+.......+        ...++.+++.+.+||.+||..||.+|||+.++++||||+.
T Consensus       304 ~elltg~~Pf~~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~  365 (377)
T 3byv_A          304 YWIWCADLPITKDAALGGSEWI--------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  365 (377)
T ss_dssp             HHHHHSSCCC------CCSGGG--------GSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred             HHHHHCCCCCcccccccchhhh--------hhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence            9999999999765443222211        1223578999999999999999999999999999999974

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=1.8e-45  Score=366.02  Aligned_cols=256  Identities=24%  Similarity=0.331  Sum_probs=198.4

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++++.||+|+||.||+|.+..+|+.||+|++...... ......+..+...++.+ +||||+++++++.+.+.+|+
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~-~h~~iv~~~~~~~~~~~~~l   83 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-QEQKRLLMDLDISMRTV-DCPFTVTFYGALFREGDVWI   83 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CH-HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSSEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCc-HHHHHHHHHHHHHHHhC-CCCeEEEEeeeeeccCCEEE
Confidence            46899999999999999999999999999999999755321 12223334444446666 99999999999999999999


Q ss_pred             EEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          160 VMELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHEN-GVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      ||||++| +|.+++..    ...+++..++.++.||+.||.|||++ ||+||||||+||++   +..+.+||+|||++..
T Consensus        84 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~  159 (290)
T 3fme_A           84 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLI---NALGQVKMCDFGISGY  159 (290)
T ss_dssp             EEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEE---CTTCCEEBCCC-----
T ss_pred             EEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE---CCCCCEEEeecCCccc
Confidence            9999975 87776643    56799999999999999999999998 99999999999999   5678999999999987


Q ss_pred             cCCCCceecccCCccccchhhhh-----ccCCCcchHHHHHHHHHHHhhCCCCCCC-CCHHHHHHHHHhCccCCCCCCCC
Q 043828          235 FKPGEQFCEIVGSPYYMAPEVLR-----RNYGPEIDVWSAGVIIYILLCGVPPFWA-ETEEGIAHAIIRGKIDFERDPWP  308 (586)
Q Consensus       235 ~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~DiwslG~il~~ll~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~  308 (586)
                      ...........||+.|+|||++.     ..++.++|||||||++|+|++|..||.. ................  ..+..
T Consensus       160 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~  237 (290)
T 3fme_A          160 LVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSP--QLPAD  237 (290)
T ss_dssp             ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCC--CCCTT
T ss_pred             ccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCC--Ccccc
Confidence            66555455568999999999962     3578899999999999999999999976 3444444444433322  22234


Q ss_pred             CCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          309 KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      .+++.+.+||.+||+.||.+|||+.|+++||||+.
T Consensus       238 ~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~  272 (290)
T 3fme_A          238 KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL  272 (290)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             cCCHHHHHHHHHHhhcChhhCcCHHHHHhCccccc
Confidence            68999999999999999999999999999999975

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=2.5e-45  Score=367.25  Aligned_cols=259  Identities=27%  Similarity=0.435  Sum_probs=218.0

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ...++|++++.||+|+||.||+|.+..+|+.+|+|++....   ....+.+.+|+.+++.+ +||||+++++++...+.+
T Consensus        16 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   91 (302)
T 2j7t_A           16 DPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATC-DHPYIVKLLGAYYHDGKL   91 (302)
T ss_dssp             CGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHC-CCTTBCCEEEEEECC-CE
T ss_pred             CCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC---HHHHHHHHHHHHHHhcC-CCCCEeeeeeeeeeCCeE
Confidence            45578999999999999999999999999999999986543   23457889999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      |+||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++....
T Consensus        92 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~  168 (302)
T 2j7t_A           92 WIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM---TLEGDIRLADFGVSAKNL  168 (302)
T ss_dssp             EEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---CTTSCEEECCCHHHHHHH
T ss_pred             EEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE---CCCCCEEEEECCCCcccc
Confidence            999999999999988875 5679999999999999999999999999999999999999   567899999999875432


Q ss_pred             C-CCceecccCCccccchhhhh------ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCC
Q 043828          237 P-GEQFCEIVGSPYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK  309 (586)
Q Consensus       237 ~-~~~~~~~~gt~~y~aPE~l~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  309 (586)
                      . ........||+.|+|||++.      ..++.++|||||||++|+|++|..||...+.......+........ .....
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~  247 (302)
T 2j7t_A          169 KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL-LTPSK  247 (302)
T ss_dssp             HHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC-SSGGG
T ss_pred             ccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCccc-CCccc
Confidence            1 11223457899999999983      3578899999999999999999999999888777776666543221 12245


Q ss_pred             CCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          310 VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ++..+.+||.+||..||.+|||+.++++||||+..
T Consensus       248 ~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  282 (302)
T 2j7t_A          248 WSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSI  282 (302)
T ss_dssp             SCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTC
T ss_pred             cCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhh
Confidence            78999999999999999999999999999999864

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=6.2e-46  Score=387.29  Aligned_cols=260  Identities=27%  Similarity=0.479  Sum_probs=196.9

Q ss_pred             CcccCeee-cceeccCCceEEEEEEEc--cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe-
Q 043828           78 NILDKYTF-GKELGRGEFGITHQCFEI--ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED-  153 (586)
Q Consensus        78 ~~~~~y~~-~~~lG~G~~g~V~~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~-  153 (586)
                      .+.+.|.+ +++||+|+||+||+|++.  .+++.||+|++.....     ...+.+|+.+|++| +||||+++++++.. 
T Consensus        17 ~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l-~hpniv~~~~~~~~~   90 (405)
T 3rgf_A           17 RVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----SMSACREIALLREL-KHPNVISLQKVFLSH   90 (405)
T ss_dssp             CHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-----CHHHHHHHHHHHHC-CCTTBCCCCEEEEET
T ss_pred             hhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-----CHHHHHHHHHHHhc-CCCCeeeEeeEEecC
Confidence            44567888 458999999999999965  5688999999865432     24678999999999 89999999999965 


Q ss_pred             -CCeEEEEEeccCCCChHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecC-CCCC
Q 043828          154 -KDAIYLVMELCEGGELFDRIVNK---------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADG-SENS  222 (586)
Q Consensus       154 -~~~~~iv~E~~~gg~L~~~l~~~---------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~-~~~~  222 (586)
                       ...+|+||||+. ++|.+++...         ..+++..++.++.||+.||.|||++||+||||||+|||+... +..+
T Consensus        91 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~  169 (405)
T 3rgf_A           91 ADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG  169 (405)
T ss_dssp             TTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTT
T ss_pred             CCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCC
Confidence             678999999996 4887777532         249999999999999999999999999999999999999532 4568


Q ss_pred             ceEEeecccccccCCC----CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHH-------
Q 043828          223 QLKAIDFGLSIFFKPG----EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEE-------  289 (586)
Q Consensus       223 ~vkl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-------  289 (586)
                      .+||+|||++......    ......+||+.|+|||++.+  .|+.++|||||||++|+|++|.+||.+....       
T Consensus       170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~  249 (405)
T 3rgf_A          170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPY  249 (405)
T ss_dssp             CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCC
T ss_pred             cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccc
Confidence            9999999999876432    22345689999999999864  4899999999999999999999999765542       


Q ss_pred             --HHHHHHHhCccCCCCCCCC----------------------------------CCCHHHHHHHHHccCCCCCCCCCHH
Q 043828          290 --GIAHAIIRGKIDFERDPWP----------------------------------KVSKEAKELVKNMLDPNPYNRLTLE  333 (586)
Q Consensus       290 --~~~~~i~~~~~~~~~~~~~----------------------------------~~~~~~~~li~~~L~~dp~~Rps~~  333 (586)
                        ..+..+.......+...|+                                  ..+..+.+||.+||..||.+|||++
T Consensus       250 ~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~  329 (405)
T 3rgf_A          250 HHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSE  329 (405)
T ss_dssp             CHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHH
T ss_pred             hHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHH
Confidence              3333333222112222222                                  1267899999999999999999999


Q ss_pred             HHhcCCCccCC
Q 043828          334 EVLENPWIKND  344 (586)
Q Consensus       334 eil~hp~~~~~  344 (586)
                      |+|+||||+..
T Consensus       330 e~L~hp~f~~~  340 (405)
T 3rgf_A          330 QAMQDPYFLED  340 (405)
T ss_dssp             HHHTSGGGTSS
T ss_pred             HHhcChhhccC
Confidence            99999999864

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=1.3e-45  Score=379.30  Aligned_cols=259  Identities=27%  Similarity=0.463  Sum_probs=216.6

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC---
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK---  154 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~---  154 (586)
                      .+..+|++++.||+|+||.||+|++..+++.||+|++....  .......+.+|+.+++++ +||||+++++++...   
T Consensus        24 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~  100 (364)
T 3qyz_A           24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE--HQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIE  100 (364)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT--CHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTT
T ss_pred             cccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc--CcHHHHHHHHHHHHHHhc-CCCCCccceeEEecCCcc
Confidence            34468999999999999999999999999999999996532  333456788999999999 899999999999765   


Q ss_pred             --CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          155 --DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       155 --~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                        ..+|+||||+. ++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++
T Consensus       101 ~~~~~~iv~e~~~-~~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~a  175 (364)
T 3qyz_A          101 QMKDVYIVQDLME-TDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA  175 (364)
T ss_dssp             TCCCEEEEEECCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTC
T ss_pred             ccceEEEEEcccC-cCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEE---CCCCCEEEEeCcce
Confidence              46899999997 589888865 469999999999999999999999999999999999999   66789999999999


Q ss_pred             cccCCCCc----eecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCC----
Q 043828          233 IFFKPGEQ----FCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF----  302 (586)
Q Consensus       233 ~~~~~~~~----~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~----  302 (586)
                      ........    ....+||+.|+|||++.  ..++.++|||||||++|+|++|.+||.+.+.......+.......    
T Consensus       176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  255 (364)
T 3qyz_A          176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED  255 (364)
T ss_dssp             EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHH
T ss_pred             EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence            86543221    23458999999999875  348999999999999999999999998877666555544211110    


Q ss_pred             ----------------C---CC----CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          303 ----------------E---RD----PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       303 ----------------~---~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                      +   ..    .++.+++.+.+||.+||..||.+|||+.|+|+||||+..
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  320 (364)
T ss_dssp             HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence                            0   00    124678999999999999999999999999999999865

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=9.9e-45  Score=363.16  Aligned_cols=255  Identities=27%  Similarity=0.462  Sum_probs=224.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .+.|++++.||+|+||.||+|++..+++.||+|++......  ...+.+.+|+.+++.+ +||||+++++++.....+|+
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   97 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWI   97 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS--TTHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH--HHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEEE
Confidence            35799999999999999999999999999999999766433  3457899999999999 99999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      ||||+++++|.+++.. +.+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.......
T Consensus        98 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~Dfg~~~~~~~~~  173 (303)
T 3a7i_A           98 IMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQ  173 (303)
T ss_dssp             EEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECBTTB
T ss_pred             EEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEE---CCCCCEEEeecccceecCccc
Confidence            9999999999998764 579999999999999999999999999999999999999   567899999999997765432


Q ss_pred             -ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          240 -QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       240 -~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                       ......||+.|+|||++. ..++.++|||||||++|+|++|..||...........+......   .....++..+.+|
T Consensus       174 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l  250 (303)
T 3a7i_A          174 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPP---TLEGNYSKPLKEF  250 (303)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC---CCCSSCCHHHHHH
T ss_pred             cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCC---CCccccCHHHHHH
Confidence             234567999999999986 46889999999999999999999999988887777666655432   2234688999999


Q ss_pred             HHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          318 VKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       318 i~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      |.+||..||.+|||+.++++||||...
T Consensus       251 i~~~l~~dp~~Rps~~~ll~~~~~~~~  277 (303)
T 3a7i_A          251 VEACLNKEPSFRPTAKELLKHKFILRN  277 (303)
T ss_dssp             HHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred             HHHHcCCChhhCcCHHHHhhChhhhcC
Confidence            999999999999999999999999753

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=2.9e-45  Score=367.34  Aligned_cols=258  Identities=25%  Similarity=0.505  Sum_probs=219.5

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCC-hhcHHHHHHHHHHHHhCCCCCCeeEEEEEEE--eCC
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIVTYKEAYE--DKD  155 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~--~~~  155 (586)
                      +.++|++++.||+|+||.||+|.+..+++.||+|++....... ......+.+|+.+++.+ +||||+++++++.  ...
T Consensus         3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~   81 (305)
T 2wtk_C            3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-RHKNVIQLVDVLYNEEKQ   81 (305)
T ss_dssp             --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECC---
T ss_pred             cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-CCCCeeEEEEEEEcCCCC
Confidence            4579999999999999999999999999999999997653221 23356789999999999 8999999999984  456


Q ss_pred             eEEEEEeccCCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          156 AIYLVMELCEGGELFDRIVN--KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                      .+|+||||++++ |.+++..  ...+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.
T Consensus        82 ~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~---~~~~~~kl~dfg~~~  157 (305)
T 2wtk_C           82 KMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL---TTGGTLKISALGVAE  157 (305)
T ss_dssp             CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTCE
T ss_pred             eEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE---cCCCcEEeecccccc
Confidence            899999999876 7677765  4569999999999999999999999999999999999999   567899999999998


Q ss_pred             ccCCC---CceecccCCccccchhhhhc---cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCC
Q 043828          234 FFKPG---EQFCEIVGSPYYMAPEVLRR---NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW  307 (586)
Q Consensus       234 ~~~~~---~~~~~~~gt~~y~aPE~l~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  307 (586)
                      .....   .......||+.|+|||++.+   .++.++|||||||++|+|++|..||.+.+.......+..+...++    
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~----  233 (305)
T 2wtk_C          158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP----  233 (305)
T ss_dssp             ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCC----
T ss_pred             ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCC----
Confidence            76432   23345679999999999864   246789999999999999999999999988888888887765543    


Q ss_pred             CCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       308 ~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      ..++..+.+||.+||..||.+|||+.++++||||+...
T Consensus       234 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  271 (305)
T 2wtk_C          234 GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKH  271 (305)
T ss_dssp             SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCC
T ss_pred             CccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCC
Confidence            35789999999999999999999999999999998653

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.3e-44  Score=364.22  Aligned_cols=257  Identities=25%  Similarity=0.439  Sum_probs=216.1

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ...++|++.+.||+|+||.||+|.+..+|+.||+|++....     ..+.+.+|+.+++.+ +||||+++++++...+.+
T Consensus        26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   99 (314)
T 3com_A           26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQC-DSPHVVKYYGSYFKNTDL   99 (314)
T ss_dssp             ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-----CCHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEE
T ss_pred             cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-----HHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEE
Confidence            34578999999999999999999999999999999997643     236788999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      |+||||+++++|.+++. ....+++..+..++.||+.||.|||+.||+||||||+||++   +.++.+||+|||++....
T Consensus       100 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~~~~~~  176 (314)
T 3com_A          100 WIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL---NTEGHAKLADFGVAGQLT  176 (314)
T ss_dssp             EEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECB
T ss_pred             EEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEE---CCCCCEEEeecccchhhh
Confidence            99999999999999987 45679999999999999999999999999999999999999   567899999999997654


Q ss_pred             CCC-ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          237 PGE-QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       237 ~~~-~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      ... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...........+....... ......++..+
T Consensus       177 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l  255 (314)
T 3com_A          177 DTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPT-FRKPELWSDNF  255 (314)
T ss_dssp             TTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC-CSSGGGSCHHH
T ss_pred             hhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcc-cCCcccCCHHH
Confidence            332 2345679999999999864 68999999999999999999999999887766655554443211 11223578999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .+||.+||..||.+|||+.++++||||+..
T Consensus       256 ~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~  285 (314)
T 3com_A          256 TDFVKQCLVKSPEQRATATQLLQHPFVRSA  285 (314)
T ss_dssp             HHHHHHHTCSCTTTSCCHHHHTTSHHHHTC
T ss_pred             HHHHHHHccCChhhCcCHHHHHhCHHHhcC
Confidence            999999999999999999999999999864

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=2.9e-46  Score=385.23  Aligned_cols=258  Identities=16%  Similarity=0.196  Sum_probs=199.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCC-CCCCeeEEE-------EEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP-KHPNIVTYK-------EAY  151 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-~hpnIv~l~-------~~~  151 (586)
                      ..+|++.+.||+|+||+||+|.+..+|+.||+|++...........+.+.+|+.+++.|. +||||++++       +++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            356999999999999999999999999999999998876544555677888876666663 599988865       555


Q ss_pred             EeC-----------------CeEEEEEeccCCCChHHHHHhC-CCCCHHHH------HHHHHHHHHHHHHHHHcCceecc
Q 043828          152 EDK-----------------DAIYLVMELCEGGELFDRIVNK-GHYTERAA------AAVGKTILRIVKVCHENGVMHRD  207 (586)
Q Consensus       152 ~~~-----------------~~~~iv~E~~~gg~L~~~l~~~-~~~~~~~~------~~i~~qi~~~l~~lH~~~ivHrD  207 (586)
                      ...                 ..+|||||||+ |+|.+++... ..+++...      ..++.||+.||.|||++||+|||
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrD  219 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGH  219 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCc
Confidence            543                 33899999998 8999999763 33444445      57779999999999999999999


Q ss_pred             CCCCceEeecCCCCCceEEeecccccccCCCCceecccCCccccchhhhhc---cCCCcchHHHHHHHHHHHhhCCCCCC
Q 043828          208 LKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR---NYGPEIDVWSAGVIIYILLCGVPPFW  284 (586)
Q Consensus       208 lkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~---~~~~~~DiwslG~il~~ll~g~~pf~  284 (586)
                      |||+|||+   +.++.+||+|||++.....  ......||+.|+|||++.+   .|+.++|||||||++|+|++|..||.
T Consensus       220 ikp~NIll---~~~~~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~  294 (371)
T 3q60_A          220 FTPDNLFI---MPDGRLMLGDVSALWKVGT--RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFG  294 (371)
T ss_dssp             CSGGGEEE---CTTSCEEECCGGGEEETTC--EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTT
T ss_pred             CCHHHEEE---CCCCCEEEEecceeeecCC--CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCC
Confidence            99999999   5678999999999986532  2225667899999999963   68999999999999999999999997


Q ss_pred             CCCHHHHH--HH---HHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          285 AETEEGIA--HA---IIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       285 ~~~~~~~~--~~---i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      ........  ..   .......+..+.++.+++.+.+||.+||+.||.+|||+.++|+||||+.
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~  358 (371)
T 3q60_A          295 LVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQ  358 (371)
T ss_dssp             BCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred             CcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence            76432100  00   0111122333344678999999999999999999999999999999985

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=1.9e-44  Score=369.12  Aligned_cols=260  Identities=30%  Similarity=0.474  Sum_probs=215.9

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC---
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK---  154 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~---  154 (586)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||+|++....  .......+.+|+.+++++ +||||+++++++...   
T Consensus         8 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~   84 (353)
T 2b9h_A            8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHF-KHENIITIFNIQRPDSFE   84 (353)
T ss_dssp             CSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS--SHHHHHHHHHHHHHHHHC-CCTTBCCEEEECCCSCST
T ss_pred             ccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc--cchHHHHHHHHHHHHHhC-cCCCcCCeeeeecccccC
Confidence            45679999999999999999999999999999999996432  333456788999999999 899999999988654   


Q ss_pred             --CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          155 --DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       155 --~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                        ..+|+||||+. ++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++
T Consensus        85 ~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~a  159 (353)
T 2b9h_A           85 NFNEVYIIQELMQ-TDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLA  159 (353)
T ss_dssp             TCCCEEEEECCCS-EEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTC
T ss_pred             ccceEEEEEeccC-ccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE---cCCCcEEEEecccc
Confidence              67999999997 589888876 579999999999999999999999999999999999999   56789999999999


Q ss_pred             cccCCCC-----------ceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCc
Q 043828          233 IFFKPGE-----------QFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK  299 (586)
Q Consensus       233 ~~~~~~~-----------~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~  299 (586)
                      .......           .....+||+.|+|||++.  ..++.++|||||||++|+|++|.+||.+.+.......+....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~  239 (353)
T 2b9h_A          160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII  239 (353)
T ss_dssp             EECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred             cccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence            8654221           122357899999999875  468889999999999999999999999888766554443211


Q ss_pred             c------------------------CCCCC----CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          300 I------------------------DFERD----PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       300 ~------------------------~~~~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      .                        ..+..    .++.+++.+.+||.+||..||.+|||+.++|+||||+...
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (353)
T 2b9h_A          240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH  313 (353)
T ss_dssp             CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence            0                        00111    1246889999999999999999999999999999998653

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=1.2e-45  Score=377.31  Aligned_cols=260  Identities=25%  Similarity=0.473  Sum_probs=223.7

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhc--------------HHHHHHHHHHHHhCCCCCC
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--------------IDDVRREVEIMRHLPKHPN  143 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~--------------~~~~~~Ei~~l~~l~~hpn  143 (586)
                      ...++|++++.||+|+||.||+|.+  +|+.||+|++..........              .+.+.+|+.+++++ +|||
T Consensus        28 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~  104 (348)
T 2pml_X           28 KYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI-KNEY  104 (348)
T ss_dssp             EEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC-CCTT
T ss_pred             cccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC-CCCC
Confidence            3457999999999999999999988  89999999997654432211              27889999999999 8999


Q ss_pred             eeEEEEEEEeCCeEEEEEeccCCCChHHH------HHh--CCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceE
Q 043828          144 IVTYKEAYEDKDAIYLVMELCEGGELFDR------IVN--KGHYTERAAAAVGKTILRIVKVCHE-NGVMHRDLKPENFL  214 (586)
Q Consensus       144 Iv~l~~~~~~~~~~~iv~E~~~gg~L~~~------l~~--~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivHrDlkp~Nil  214 (586)
                      |+++++++.+.+.+|+||||+++++|.++      +..  ...+++..++.++.||+.||.|||+ +||+||||||+||+
T Consensus       105 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil  184 (348)
T 2pml_X          105 CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNIL  184 (348)
T ss_dssp             BCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEE
T ss_pred             cceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEE
Confidence            99999999999999999999999999988      655  5679999999999999999999999 99999999999999


Q ss_pred             eecCCCCCceEEeecccccccCCCCceecccCCccccchhhhhcc--CCC-cchHHHHHHHHHHHhhCCCCCCCCCH-HH
Q 043828          215 FADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRRN--YGP-EIDVWSAGVIIYILLCGVPPFWAETE-EG  290 (586)
Q Consensus       215 l~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~-~~DiwslG~il~~ll~g~~pf~~~~~-~~  290 (586)
                      +   +.++.+||+|||++...... ......||+.|+|||++.+.  ++. ++|||||||++|+|++|..||..... ..
T Consensus       185 ~---~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  260 (348)
T 2pml_X          185 M---DKNGRVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE  260 (348)
T ss_dssp             E---CTTSCEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH
T ss_pred             E---cCCCcEEEeccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH
Confidence            9   67789999999999876443 44556899999999999743  555 89999999999999999999988766 67


Q ss_pred             HHHHHHhCccCCCCCC---------------CCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          291 IAHAIIRGKIDFERDP---------------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       291 ~~~~i~~~~~~~~~~~---------------~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ....+..+...++...               ...++..+.+||.+||+.||.+|||+.++++||||+..
T Consensus       261 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~  329 (348)
T 2pml_X          261 LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT  329 (348)
T ss_dssp             HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence            7777776665554311               14688999999999999999999999999999999864

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=7.4e-45  Score=367.96  Aligned_cols=262  Identities=24%  Similarity=0.387  Sum_probs=216.7

Q ss_pred             cccCeeecceeccCCceEEEEEEEc-cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCC--CCCCeeEEEEEEE---
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEI-ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP--KHPNIVTYKEAYE---  152 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~--~hpnIv~l~~~~~---  152 (586)
                      ..++|++.+.||+|+||.||+|.+. .+|+.||+|++........ ....+.+|+.+++.+.  +||||+++++++.   
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG-MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS-CBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccccc-CCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence            3478999999999999999999985 6788999999976543221 1234566777766653  7999999999987   


Q ss_pred             --eCCeEEEEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEee
Q 043828          153 --DKDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID  228 (586)
Q Consensus       153 --~~~~~~iv~E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~D  228 (586)
                        ....+++||||+. |+|.+++....  .+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|
T Consensus        88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili---~~~~~~kl~D  163 (326)
T 1blx_A           88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLAD  163 (326)
T ss_dssp             CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECS
T ss_pred             cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEE---cCCCCEEEec
Confidence              5577999999997 59999987643  49999999999999999999999999999999999999   5678999999


Q ss_pred             cccccccCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccC-----C
Q 043828          229 FGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID-----F  302 (586)
Q Consensus       229 fg~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~-----~  302 (586)
                      ||++.............||+.|+|||++. ..++.++|||||||++|+|++|..||.+.+.......+......     +
T Consensus       164 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  243 (326)
T 1blx_A          164 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW  243 (326)
T ss_dssp             CCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGS
T ss_pred             CcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccC
Confidence            99998765444445678999999999986 46899999999999999999999999998887777666532110     0


Q ss_pred             C------------------CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          303 E------------------RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       303 ~------------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      +                  ...++.++..+++||.+||..||.+|||+.++|+||||+...
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  304 (326)
T 1blx_A          244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE  304 (326)
T ss_dssp             CTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             ccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccc
Confidence            0                  011246789999999999999999999999999999998653

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=1.8e-45  Score=368.44  Aligned_cols=259  Identities=29%  Similarity=0.514  Sum_probs=198.4

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++......  ...+.+.+|+.+++++ +||||+++++++...+.+|+
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   90 (303)
T 2vwi_A           14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ--TSMDELLKEIQAMSQC-HHPNIVSYYTSFVVKDELWL   90 (303)
T ss_dssp             CCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCC-CCTTBCCEEEEEESSSCEEE
T ss_pred             hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcc--hhHHHHHHHHHHHhhc-CCCCEeeEEEEEeecCCcEE
Confidence            46899999999999999999998889999999998654322  2346788999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHh--------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          160 VMELCEGGELFDRIVN--------KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~--------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                      ||||+++++|.+++..        ...+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||+
T Consensus        91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~---~~~~~~kl~dfg~  167 (303)
T 2vwi_A           91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGV  167 (303)
T ss_dssp             EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---CTTCCEEECCCHH
T ss_pred             EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEE---cCCCCEEEEeccc
Confidence            9999999999998874        4568999999999999999999999999999999999999   5678999999999


Q ss_pred             ccccCCCC------ceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCC
Q 043828          232 SIFFKPGE------QFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE  303 (586)
Q Consensus       232 a~~~~~~~------~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~  303 (586)
                      +.......      ......||+.|+|||++.  ..++.++|||||||++|+|++|..||....................
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  247 (303)
T 2vwi_A          168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSL  247 (303)
T ss_dssp             HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCT
T ss_pred             hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcc
Confidence            87654321      123457999999999986  3589999999999999999999999988776655554444332211


Q ss_pred             ------CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          304 ------RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       304 ------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                            ...+..++..+.+||.+||+.||.+|||+.++++||||+..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  294 (303)
T 2vwi_A          248 ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA  294 (303)
T ss_dssp             TC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC---
T ss_pred             ccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcC
Confidence                  12235688999999999999999999999999999999864

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=4e-45  Score=378.17  Aligned_cols=260  Identities=26%  Similarity=0.412  Sum_probs=215.0

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCC-----eeEEEEEE
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN-----IVTYKEAY  151 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpn-----Iv~l~~~~  151 (586)
                      ..+.++|++.+.||+|+||+||+|++..+++.||+|++...    ......+.+|+.+++.+..|++     |+++++++
T Consensus        50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  125 (382)
T 2vx3_A           50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHF  125 (382)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEE
T ss_pred             CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeee
Confidence            34678999999999999999999999999999999999643    2234667889999988854664     99999999


Q ss_pred             EeCCeEEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHH--HcCceeccCCCCceEeecCCCCCceEEe
Q 043828          152 EDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCH--ENGVMHRDLKPENFLFADGSENSQLKAI  227 (586)
Q Consensus       152 ~~~~~~~iv~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH--~~~ivHrDlkp~Nill~~~~~~~~vkl~  227 (586)
                      ...+.+|+||||+. ++|.+++...  ..+++..+..++.||+.||.|||  +.||+||||||+|||+.. +..+.+||+
T Consensus       126 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~-~~~~~~kL~  203 (382)
T 2vx3_A          126 MFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN-PKRSAIKIV  203 (382)
T ss_dssp             EETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESS-TTSCCEEEC
T ss_pred             ccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEec-CCCCcEEEE
Confidence            99999999999996 5999998865  46999999999999999999999  579999999999999953 246789999


Q ss_pred             ecccccccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCC---
Q 043828          228 DFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE---  303 (586)
Q Consensus       228 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~---  303 (586)
                      |||++.....  ......||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+..+....+.......+   
T Consensus       204 DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~  281 (382)
T 2vx3_A          204 DFGSSCQLGQ--RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHI  281 (382)
T ss_dssp             CCTTCEETTC--CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred             eccCceeccc--ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence            9999987643  2345689999999999874 689999999999999999999999999888777766654211110   


Q ss_pred             ---------------CCCC-----------------CC-------------------------CCHHHHHHHHHccCCCC
Q 043828          304 ---------------RDPW-----------------PK-------------------------VSKEAKELVKNMLDPNP  326 (586)
Q Consensus       304 ---------------~~~~-----------------~~-------------------------~~~~~~~li~~~L~~dp  326 (586)
                                     ...|                 ..                         .++.+++||.+||+.||
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP  361 (382)
T 2vx3_A          282 LDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDP  361 (382)
T ss_dssp             HTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCT
T ss_pred             HHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCCh
Confidence                           0000                 00                         01378999999999999


Q ss_pred             CCCCCHHHHhcCCCccCC
Q 043828          327 YNRLTLEEVLENPWIKND  344 (586)
Q Consensus       327 ~~Rps~~eil~hp~~~~~  344 (586)
                      .+|||+.|+|+||||+..
T Consensus       362 ~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          362 KTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             TTSCCHHHHTTSGGGCC-
T ss_pred             hhCCCHHHHhcCcccccC
Confidence            999999999999999864

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=5.8e-45  Score=374.07  Aligned_cols=258  Identities=27%  Similarity=0.380  Sum_probs=203.8

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe--
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA--  156 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~--  156 (586)
                      ..++|++.+.||+|+||.||+|.+..+|+.||+|++.......    ....+++..+..+ +||||+++++++.....  
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~~~l~~l-~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR----NRELQIMQDLAVL-HHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             HHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCC----CHHHHHHHHHHHH-CCTTBCCEEEEEEEECSSC
T ss_pred             hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcccc----HHHHHHHHHHHhc-CCCCcccHHHhhhcccccc
Confidence            3578999999999999999999999999999999986543222    3456788888888 89999999999976433  


Q ss_pred             -----EEEEEeccCCCChHHHH----HhCCCCCHHHHHHHHHHHHHHHHHHH--HcCceeccCCCCceEeecCCCCCceE
Q 043828          157 -----IYLVMELCEGGELFDRI----VNKGHYTERAAAAVGKTILRIVKVCH--ENGVMHRDLKPENFLFADGSENSQLK  225 (586)
Q Consensus       157 -----~~iv~E~~~gg~L~~~l----~~~~~~~~~~~~~i~~qi~~~l~~lH--~~~ivHrDlkp~Nill~~~~~~~~vk  225 (586)
                           +++||||+++ +|...+    .....+++..+..++.|++.||.|||  ++||+||||||+|||++  ..++.+|
T Consensus        96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~--~~~~~~k  172 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVN--EADGTLK  172 (360)
T ss_dssp             TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEE--TTTTEEE
T ss_pred             ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEe--CCCCcEE
Confidence                 8999999986 444433    34567999999999999999999999  99999999999999995  2367999


Q ss_pred             EeecccccccCCCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCC
Q 043828          226 AIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE  303 (586)
Q Consensus       226 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~  303 (586)
                      |+|||++.............||+.|+|||++.+  .++.++|||||||++|+|++|..||.+.+.......+.+.....+
T Consensus       173 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~  252 (360)
T 3e3p_A          173 LCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPS  252 (360)
T ss_dssp             ECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC
T ss_pred             EeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCC
Confidence            999999988776666666789999999999853  489999999999999999999999999888777766654211100


Q ss_pred             ----------------------------CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          304 ----------------------------RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       304 ----------------------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                                  .......+..+.+||.+||+.||.+|||+.|+|+||||+..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  321 (360)
T 3e3p_A          253 REVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDEL  321 (360)
T ss_dssp             HHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGG
T ss_pred             HHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcccccc
Confidence                                        00112356789999999999999999999999999999864

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=1.4e-44  Score=362.84  Aligned_cols=257  Identities=25%  Similarity=0.401  Sum_probs=211.1

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ...++|++.+.||+|+||+||+|.+  +|..||+|++...... ....+.+.+|+.+++++ +||||+++++++.+...+
T Consensus        34 i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~  109 (309)
T 3p86_A           34 IPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFH-AERVNEFLREVAIMKRL-RHPNIVLFMGAVTQPPNL  109 (309)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCS-HHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSTTCC
T ss_pred             CChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCC-HHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCce
Confidence            3457899999999999999999975  6889999998765432 33456788999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCC---CCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          158 YLVMELCEGGELFDRIVNKGH---YTERAAAAVGKTILRIVKVCHENG--VMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~--ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                      ++||||+++|+|.+++.....   +++..+..++.||+.||.|||++|  |+||||||+||++   +.++.+||+|||++
T Consensus       110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll---~~~~~~kL~Dfg~a  186 (309)
T 3p86_A          110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV---DKKYTVKVCDFGLS  186 (309)
T ss_dssp             EEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEE---CTTCCEEECCCC--
T ss_pred             EEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEE---eCCCcEEECCCCCC
Confidence            999999999999999986543   999999999999999999999999  9999999999999   66789999999999


Q ss_pred             cccCCCC-ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          233 IFFKPGE-QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       233 ~~~~~~~-~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      ....... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...+.......+.........  ...+
T Consensus       187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~  264 (309)
T 3p86_A          187 RLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEI--PRNL  264 (309)
T ss_dssp             ---------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCC--CTTS
T ss_pred             ccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCC--CccC
Confidence            7654322 2345679999999999974 5899999999999999999999999999888877776544433322  2468


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhc--CCCccC
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLE--NPWIKN  343 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~--hp~~~~  343 (586)
                      ++.+.+||.+||+.||.+|||+.++++  +++++.
T Consensus       265 ~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          265 NPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            999999999999999999999999997  455543

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=9.3e-45  Score=358.80  Aligned_cols=257  Identities=33%  Similarity=0.571  Sum_probs=221.2

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe--CCe
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED--KDA  156 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~--~~~  156 (586)
                      ..++|++++.||+|+||.||+|.+..+|+.||+|++...... ....+.+.+|+.+++++ +||||+++++++.+  ...
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   81 (279)
T 2w5a_A            4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTT   81 (279)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEEGGGTE
T ss_pred             chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhc-CCCCCCeEEEEEecCCCce
Confidence            347899999999999999999999999999999999765432 33457789999999999 89999999998854  578


Q ss_pred             EEEEEeccCCCChHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHHcC-----ceeccCCCCceEeecCCCCCceEEe
Q 043828          157 IYLVMELCEGGELFDRIVNK----GHYTERAAAAVGKTILRIVKVCHENG-----VMHRDLKPENFLFADGSENSQLKAI  227 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~-----ivHrDlkp~Nill~~~~~~~~vkl~  227 (586)
                      +|+||||+++++|.+++...    ..+++..++.++.|++.||.|||+.+     |+||||||+||++   +.++.+||+
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~---~~~~~~kl~  158 (279)
T 2w5a_A           82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLG  158 (279)
T ss_dssp             EEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEE---CSSSCEEEC
T ss_pred             EEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEE---cCCCCEEEe
Confidence            99999999999999998753    34999999999999999999999999     9999999999999   567899999


Q ss_pred             ecccccccCCCCc-eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCC
Q 043828          228 DFGLSIFFKPGEQ-FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD  305 (586)
Q Consensus       228 Dfg~a~~~~~~~~-~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~  305 (586)
                      |||++........ .....||+.|+|||++.+ .++.++|||||||++|+|++|..||...+...+...+..+.....  
T Consensus       159 dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~--  236 (279)
T 2w5a_A          159 DFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRI--  236 (279)
T ss_dssp             CCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC--
T ss_pred             cCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccC--
Confidence            9999987644322 234579999999999864 688999999999999999999999999888888888877754321  


Q ss_pred             CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       306 ~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                       ...++..+.+||.+||+.||.+|||+.++++|||+..
T Consensus       237 -~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~  273 (279)
T 2w5a_A          237 -PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE  273 (279)
T ss_dssp             -CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred             -CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence             2368899999999999999999999999999999975

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=4e-45  Score=376.53  Aligned_cols=257  Identities=27%  Similarity=0.473  Sum_probs=213.7

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .+.++|.+.+.||+|+||.||+|.+..+|+.||+|++.... ........+.+|+.+++.+ +||||+++++++...+..
T Consensus        39 ~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~  116 (371)
T 4exu_A           39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSL  116 (371)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-SSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSS
T ss_pred             cccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc-cchhHHHHHHHHHHHHHhc-CCCCchhhhhheeccCCc
Confidence            45579999999999999999999999999999999997643 2334457788999999999 899999999999877654


Q ss_pred             ------EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          158 ------YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       158 ------~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                            |+||||+. ++|.+++.  ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+
T Consensus       117 ~~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kL~Dfg~  190 (371)
T 4exu_A          117 RNFYDFYLVMPFMQ-TDLQKIMG--MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV---NEDCELKILDFGL  190 (371)
T ss_dssp             TTCCCCEEEEECCC-EEHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECSTTC
T ss_pred             ccceeEEEEEcccc-ccHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEE---CCCCCEEEEecCc
Confidence                  99999997 58877663  459999999999999999999999999999999999999   6678999999999


Q ss_pred             ccccCCCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCC-------
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF-------  302 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~-------  302 (586)
                      +.....  ......||+.|+|||++.+  .++.++|||||||++|+|++|..||.+.+..+....+.......       
T Consensus       191 a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  268 (371)
T 4exu_A          191 ARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK  268 (371)
T ss_dssp             C----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred             cccccc--CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHH
Confidence            986543  2345678999999999864  68999999999999999999999999988777666654311100       


Q ss_pred             ----------------CCC----CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          303 ----------------ERD----PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       303 ----------------~~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                      +..    .++.+++.+.+||.+||+.||.+|||+.|+|+||||+..
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  330 (371)
T 4exu_A          269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF  330 (371)
T ss_dssp             CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccC
Confidence                            000    124578999999999999999999999999999999864

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=1e-44  Score=362.73  Aligned_cols=255  Identities=27%  Similarity=0.481  Sum_probs=211.1

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe-----
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED-----  153 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~-----  153 (586)
                      +.++|++++.||+|+||.||+|++..+|+.||+|++...    ....+.+.+|+.+++++ +||||+++++++.+     
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~   78 (303)
T 1zy4_A            4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASL-NHQYVVRYYAAWLERRNFV   78 (303)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEECCCCC
T ss_pred             ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhc-CchHHHHHHHHHHhhcchh
Confidence            456899999999999999999999999999999999643    23356788999999999 89999999998865     


Q ss_pred             --------CCeEEEEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCce
Q 043828          154 --------KDAIYLVMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQL  224 (586)
Q Consensus       154 --------~~~~~iv~E~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~v  224 (586)
                              ...+|+||||+++++|.+++.... .+++..++.++.||+.||.|||++||+||||||+||++   +.++.+
T Consensus        79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~---~~~~~~  155 (303)
T 1zy4_A           79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI---DESRNV  155 (303)
T ss_dssp             C------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCE
T ss_pred             hhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEE---cCCCCE
Confidence                    457899999999999999998643 57889999999999999999999999999999999999   567899


Q ss_pred             EEeecccccccCCC---------------CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCC-
Q 043828          225 KAIDFGLSIFFKPG---------------EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAE-  286 (586)
Q Consensus       225 kl~Dfg~a~~~~~~---------------~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~-  286 (586)
                      ||+|||++......               .......||+.|+|||++.+  .++.++|||||||++|+|++   ||... 
T Consensus       156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~  232 (303)
T 1zy4_A          156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM  232 (303)
T ss_dssp             EECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred             EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch
Confidence            99999999765321               12334678999999999864  58999999999999999998   55432 


Q ss_pred             CHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          287 TEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       287 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ........+......++.......+..+.+||.+||+.||.+|||+.++++||||+..
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (303)
T 1zy4_A          233 ERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK  290 (303)
T ss_dssp             HHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred             hHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence            3344555666666666655556778899999999999999999999999999999753

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=5.3e-45  Score=374.79  Aligned_cols=258  Identities=19%  Similarity=0.220  Sum_probs=219.1

Q ss_pred             cccCeeecceeccCCceEEEEEE-----EccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe
Q 043828           79 ILDKYTFGKELGRGEFGITHQCF-----EIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED  153 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~-----~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~  153 (586)
                      ..++|++++.||+|+||+||+|.     +..++..||+|++....  .......+.+|+.+++++ +||||+++++++.+
T Consensus        69 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~  145 (367)
T 3l9p_A           69 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKF-NHQNIVRCIGVSLQ  145 (367)
T ss_dssp             CGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECS
T ss_pred             CHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc--ChhhHHHHHHHHHHHHhC-CCCCCCeEEEEEec
Confidence            45789999999999999999998     45678899999986432  233445788999999999 89999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEE
Q 043828          154 KDAIYLVMELCEGGELFDRIVNK-------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKA  226 (586)
Q Consensus       154 ~~~~~iv~E~~~gg~L~~~l~~~-------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl  226 (586)
                      ....|+|||||+||+|.+++...       ..+++..+..++.||+.||.|||++||+||||||+|||++.......+||
T Consensus       146 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL  225 (367)
T 3l9p_A          146 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKI  225 (367)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEE
Confidence            99999999999999999999764       35899999999999999999999999999999999999964435567999


Q ss_pred             eecccccccCC---CCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccC
Q 043828          227 IDFGLSIFFKP---GEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKID  301 (586)
Q Consensus       227 ~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~  301 (586)
                      +|||++.....   ........||+.|+|||++. ..++.++|||||||++|+|++ |..||...........+..+...
T Consensus       226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~  305 (367)
T 3l9p_A          226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM  305 (367)
T ss_dssp             CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC
T ss_pred             CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Confidence            99999975421   12234467899999999985 568999999999999999998 99999999998888888776532


Q ss_pred             CCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCcc
Q 043828          302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK  342 (586)
Q Consensus       302 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~  342 (586)
                      ..   ...++..+.+||.+||+.||.+|||+.++++|.|+.
T Consensus       306 ~~---~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          306 DP---PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             CC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CC---CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            22   246889999999999999999999999999997764

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=8.1e-45  Score=366.46  Aligned_cols=260  Identities=30%  Similarity=0.464  Sum_probs=211.9

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEE-----
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYE-----  152 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~-----  152 (586)
                      .+.++|++++.||+|+||.||+|.+..+|+.||+|++...   .....+.+.+|+.+++++ +||||+++++++.     
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~   83 (320)
T 2i6l_A            8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRL-DHDNIVKVFEILGPSGSQ   83 (320)
T ss_dssp             EETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECTTSCB
T ss_pred             ccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhc-CCCCeeEEEEeccccccc
Confidence            4567999999999999999999999999999999998654   234457788999999999 8999999999873     


Q ss_pred             ---------eCCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCc
Q 043828          153 ---------DKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQ  223 (586)
Q Consensus       153 ---------~~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~  223 (586)
                               ....+|+||||++ |+|.+++.. +.+++..++.++.||+.||.|||++||+||||||+||+++  ..++.
T Consensus        84 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~--~~~~~  159 (320)
T 2i6l_A           84 LTDDVGSLTELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN--TEDLV  159 (320)
T ss_dssp             CCC----CCSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE--TTTTE
T ss_pred             cccccccccccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc--CCCCe
Confidence                     4478999999997 599888754 5799999999999999999999999999999999999995  24578


Q ss_pred             eEEeecccccccCCC----CceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHh
Q 043828          224 LKAIDFGLSIFFKPG----EQFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIR  297 (586)
Q Consensus       224 vkl~Dfg~a~~~~~~----~~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~  297 (586)
                      +||+|||++......    .......||+.|+|||++.  ..++.++|||||||++|+|++|..||.+.+.......+..
T Consensus       160 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~  239 (320)
T 2i6l_A          160 LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILE  239 (320)
T ss_dssp             EEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             EEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            999999999875432    1233456899999999885  4688899999999999999999999999887776666544


Q ss_pred             CccCC----------------------CCC----CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          298 GKIDF----------------------ERD----PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       298 ~~~~~----------------------~~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      .....                      +..    .++.++..+.+||.+||+.||.+|||+.++|+||||+...
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (320)
T 2i6l_A          240 SIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS  313 (320)
T ss_dssp             HSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTC
T ss_pred             hcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccccc
Confidence            32110                      111    1246899999999999999999999999999999998643

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=4.7e-45  Score=375.06  Aligned_cols=261  Identities=25%  Similarity=0.396  Sum_probs=207.3

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccC--------ChhcHHHHHHHHHHHHhCCCCCCeeEEEE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK--------TEIDIDDVRREVEIMRHLPKHPNIVTYKE  149 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~--------~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~  149 (586)
                      .+.++|++++.||+|+||.||+|.+.. |..||+|++......        .....+.+.+|+.+++++ +||||+++++
T Consensus        19 ~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~   96 (362)
T 3pg1_A           19 AMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-HHPNILGLRD   96 (362)
T ss_dssp             HTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-CCTTBCCCSE
T ss_pred             HhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-CCcCccceee
Confidence            345789999999999999999998754 899999998654322        122247789999999999 8999999999


Q ss_pred             EEEe-----CCeEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCc
Q 043828          150 AYED-----KDAIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQ  223 (586)
Q Consensus       150 ~~~~-----~~~~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~  223 (586)
                      ++..     ...+|+||||+. |+|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++   +.++.
T Consensus        97 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~---~~~~~  172 (362)
T 3pg1_A           97 IFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL---ADNND  172 (362)
T ss_dssp             EEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCC
T ss_pred             eEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEE---cCCCC
Confidence            9854     346899999997 5888877654 469999999999999999999999999999999999999   56789


Q ss_pred             eEEeecccccccCCCCceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc-
Q 043828          224 LKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI-  300 (586)
Q Consensus       224 vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~-  300 (586)
                      +||+|||++.............||+.|+|||++.  ..++.++|||||||++|+|++|..||.+.+.......+..... 
T Consensus       173 ~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~  252 (362)
T 3pg1_A          173 ITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGT  252 (362)
T ss_dssp             EEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred             EEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC
Confidence            9999999998665555555678999999999986  4689999999999999999999999999887776665543111 


Q ss_pred             -----------------------CCCCC----CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          301 -----------------------DFERD----PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       301 -----------------------~~~~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                             ..+..    ..+.+++.+.+||.+||+.||.+|||+.|+|+||||+..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  323 (362)
T 3pg1_A          253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL  323 (362)
T ss_dssp             CCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTT
T ss_pred             CChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhc
Confidence                                   11111    123568899999999999999999999999999999864

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=3e-44  Score=358.09  Aligned_cols=255  Identities=27%  Similarity=0.415  Sum_probs=208.6

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVM  161 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~  161 (586)
                      +|.....||+|+||.||+|.+..++..||+|++....   ....+.+.+|+.+++.+ +||||+++++++...+.+++||
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~   98 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHL-KHKNIVQYLGSFSENGFIKIFM   98 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC---C---HHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEEEEE
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc---hHHHHHHHHHHHHHHhC-CCCCEeeEeeEEEeCCcEEEEE
Confidence            4445558999999999999999999999999997653   22346789999999999 8999999999999999999999


Q ss_pred             eccCCCChHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          162 ELCEGGELFDRIVNK---GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       162 E~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||+++++|.+++...   ..+++..+..++.||+.||.|||++||+||||||+||+++.  .++.+||+|||++......
T Consensus        99 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~~kl~Dfg~~~~~~~~  176 (295)
T 2clq_A           99 EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT--YSGVLKISDFGTSKRLAGI  176 (295)
T ss_dssp             ECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTCCEEECCTTTCEESCC-
T ss_pred             EeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEEC--CCCCEEEeecccccccCCC
Confidence            999999999999764   24678999999999999999999999999999999999952  3679999999999876432


Q ss_pred             C-ceecccCCccccchhhhhc---cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHH-HHHHHHhCccCCCCCCCCCCCHH
Q 043828          239 E-QFCEIVGSPYYMAPEVLRR---NYGPEIDVWSAGVIIYILLCGVPPFWAETEEG-IAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       239 ~-~~~~~~gt~~y~aPE~l~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      . ......||+.|+|||++.+   .++.++|||||||++|+|++|..||....... ........  .........++..
T Consensus       177 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  254 (295)
T 2clq_A          177 NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMF--KVHPEIPESMSAE  254 (295)
T ss_dssp             ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHH--CCCCCCCTTSCHH
T ss_pred             CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccc--cccccccccCCHH
Confidence            2 2335679999999999864   37889999999999999999999997643322 22111111  1112223568999


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +.+||.+||..||.+|||+.++|+||||+..
T Consensus       255 ~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~  285 (295)
T 2clq_A          255 AKAFILKCFEPDPDKRACANDLLVDEFLKVS  285 (295)
T ss_dssp             HHHHHHHTTCSSTTTSCCHHHHHTSGGGCC-
T ss_pred             HHHHHHHHccCChhhCCCHHHHhcChhhhhc
Confidence            9999999999999999999999999999864

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=2.7e-44  Score=363.46  Aligned_cols=251  Identities=22%  Similarity=0.307  Sum_probs=214.3

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCc---EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGE---TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      ..++|++.+.||+|+||.||+|.+..++.   .||+|++....  .....+.+.+|+.+++.+ +||||+++++++.+.+
T Consensus        47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~  123 (325)
T 3kul_A           47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQF-DHPNIIRLEGVVTRGR  123 (325)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECGGG
T ss_pred             ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEeCC
Confidence            34689999999999999999999886555   49999996543  233456789999999999 8999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      .+|+||||++|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++..
T Consensus       124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~  200 (325)
T 3kul_A          124 LAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRV  200 (325)
T ss_dssp             CCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCSSCEE
T ss_pred             ccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE---CCCCCEEECCCCcccc
Confidence            999999999999999999754 579999999999999999999999999999999999999   6678999999999987


Q ss_pred             cCCCC----ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCC
Q 043828          235 FKPGE----QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWP  308 (586)
Q Consensus       235 ~~~~~----~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  308 (586)
                      .....    ......+|+.|+|||++. ..++.++|||||||++|+|++ |..||...........+..+...   +...
T Consensus       201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~  277 (325)
T 3kul_A          201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRL---PAPM  277 (325)
T ss_dssp             CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCC---CCCT
T ss_pred             cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCC---CCCC
Confidence            64332    122345678899999987 568999999999999999999 99999999998888887766322   2224


Q ss_pred             CCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          309 KVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .++..+.+||.+||..||.+|||+.++++.
T Consensus       278 ~~~~~l~~li~~~l~~dp~~Rps~~eil~~  307 (325)
T 3kul_A          278 GCPHALHQLMLDCWHKDRAQRPRFSQIVSV  307 (325)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CcCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            689999999999999999999999999873

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=2.5e-44  Score=365.88  Aligned_cols=259  Identities=27%  Similarity=0.448  Sum_probs=213.7

Q ss_pred             CcccCeeecceeccCCceEEEEEEE-ccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCC------CeeEEEEE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFE-IETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP------NIVTYKEA  150 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~-~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hp------nIv~l~~~  150 (586)
                      .+.++|++.+.||+|+||.||+|.+ ..+|+.||+|++...    ....+.+.+|+.+++.+ +|+      +|++++++
T Consensus        11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l-~~~~~~~~~~i~~~~~~   85 (339)
T 1z57_A           11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHL-NTTDPNSTFRCVQMLEW   85 (339)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHH-HHHCTTCTTCBCCEEEE
T ss_pred             CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHh-hhcCCCCceeeEeeecc
Confidence            3457999999999999999999998 568899999998643    23346788999999888 554      59999999


Q ss_pred             EEeCCeEEEEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCC--------
Q 043828          151 YEDKDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSE--------  220 (586)
Q Consensus       151 ~~~~~~~~iv~E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~--------  220 (586)
                      +...+.+|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||+...+.        
T Consensus        86 ~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~  164 (339)
T 1z57_A           86 FEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKI  164 (339)
T ss_dssp             EEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC---
T ss_pred             cccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcc
Confidence            99999999999999 889999998765  6899999999999999999999999999999999999953211        


Q ss_pred             --------CCceEEeecccccccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHH
Q 043828          221 --------NSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGI  291 (586)
Q Consensus       221 --------~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~  291 (586)
                              ++.+||+|||++.....  ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...+..+.
T Consensus       165 ~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  242 (339)
T 1z57_A          165 KRDERTLINPDIKVVDFGSATYDDE--HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH  242 (339)
T ss_dssp             -CEEEEESCCCEEECCCSSCEETTS--CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH
T ss_pred             ccccccccCCCceEeeCcccccCcc--ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH
Confidence                    56899999999986543  2345679999999999864 689999999999999999999999998887765


Q ss_pred             HHHHHhCccCCCC----------------CCC------------------------CCCCHHHHHHHHHccCCCCCCCCC
Q 043828          292 AHAIIRGKIDFER----------------DPW------------------------PKVSKEAKELVKNMLDPNPYNRLT  331 (586)
Q Consensus       292 ~~~i~~~~~~~~~----------------~~~------------------------~~~~~~~~~li~~~L~~dp~~Rps  331 (586)
                      ...+......++.                ..|                        ...++.+.+||.+||..||.+|||
T Consensus       243 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt  322 (339)
T 1z57_A          243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRIT  322 (339)
T ss_dssp             HHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccC
Confidence            5544332111110                001                        122467889999999999999999


Q ss_pred             HHHHhcCCCccCC
Q 043828          332 LEEVLENPWIKND  344 (586)
Q Consensus       332 ~~eil~hp~~~~~  344 (586)
                      +.|+|+||||+..
T Consensus       323 ~~ell~hp~f~~~  335 (339)
T 1z57_A          323 LREALKHPFFDLL  335 (339)
T ss_dssp             HHHHTTSGGGGGG
T ss_pred             HHHHhcCHHHHHH
Confidence            9999999999853

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=2.9e-44  Score=367.86  Aligned_cols=257  Identities=26%  Similarity=0.471  Sum_probs=213.0

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe-
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA-  156 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~-  156 (586)
                      .+.++|.+.+.||+|+||.||+|++..+|+.||+|++.... ........+.+|+.+++.+ +||||+++++++..... 
T Consensus        21 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~   98 (353)
T 3coi_A           21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHM-QHENVIGLLDVFTPASSL   98 (353)
T ss_dssp             EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSG
T ss_pred             ccCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhc-CCCCcccHhheEeccccc
Confidence            34578999999999999999999999999999999997643 2334456788999999999 89999999999987654 


Q ss_pred             -----EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          157 -----IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       157 -----~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                           +|+||||+. ++|.+++.  ..+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||+
T Consensus        99 ~~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~---~~~~~~kl~Dfg~  172 (353)
T 3coi_A           99 RNFYDFYLVMPFMQ-TDLQKIMG--LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV---NEDCELKILDFGL  172 (353)
T ss_dssp             GGCCCCEEEEECCS-EEGGGTTT--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CTTCCEEECSTTC
T ss_pred             ccceeEEEEecccc-CCHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeE---CCCCcEEEeeccc
Confidence                 599999997 58877664  359999999999999999999999999999999999999   5678999999999


Q ss_pred             ccccCCCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc---------
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI---------  300 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~---------  300 (586)
                      +.....  ......||+.|+|||++.+  .++.++|||||||++|+|++|..||.+.+.......+.....         
T Consensus       173 ~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  250 (353)
T 3coi_A          173 ARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK  250 (353)
T ss_dssp             TTC----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTT
T ss_pred             ccCCCC--CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence            986542  2345678999999999864  689999999999999999999999998887766655543110         


Q ss_pred             --------------CCC----CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          301 --------------DFE----RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       301 --------------~~~----~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                    ..+    ...++.+++.+.+||.+||..||.+|||+.++|+||||+..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  312 (353)
T 3coi_A          251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF  312 (353)
T ss_dssp             CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence                          000    11235678999999999999999999999999999999854

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.7e-44  Score=360.00  Aligned_cols=256  Identities=23%  Similarity=0.364  Sum_probs=209.1

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      +...++|++.+.||+|+||.||+|.+..+++.||+|++...........+.+.+|+.+++++ +||||+++++++..++.
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~  108 (309)
T 2h34_A           30 GTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRL-QEPHVVPIHDFGEIDGQ  108 (309)
T ss_dssp             ----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTE
T ss_pred             CcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc-CCCCeeEEEEEEeeCCe
Confidence            45568999999999999999999999999999999999776555554567889999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|+||||++|++|.+++.....+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++....
T Consensus       109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~---~~~~~~kl~Dfg~~~~~~  185 (309)
T 2h34_A          109 LYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILV---SADDFAYLVDFGIASATT  185 (309)
T ss_dssp             EEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSCCC-----
T ss_pred             EEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEE---cCCCCEEEecCccCcccc
Confidence            99999999999999999988889999999999999999999999999999999999999   567899999999987654


Q ss_pred             CCC--ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          237 PGE--QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       237 ~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ...  ......||+.|+|||++. ..++.++||||||+++|+|++|..||...........+ ......+....+.++..
T Consensus       186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  264 (309)
T 2h34_A          186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHI-NQAIPRPSTVRPGIPVA  264 (309)
T ss_dssp             -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHH-HSCCCCGGGTSTTCCTH
T ss_pred             ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHh-ccCCCCccccCCCCCHH
Confidence            332  233467999999999986 46889999999999999999999999887665444433 33333333344678999


Q ss_pred             HHHHHHHccCCCCCCCC-CHHHHhc
Q 043828          314 AKELVKNMLDPNPYNRL-TLEEVLE  337 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rp-s~~eil~  337 (586)
                      +.+||.+||..||.+|| |++++++
T Consensus       265 l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          265 FDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             HHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             HHHHHHHhccCCHHHHHHhHHHHHH
Confidence            99999999999999999 8888875

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=1e-44  Score=377.19  Aligned_cols=258  Identities=22%  Similarity=0.369  Sum_probs=205.4

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCC-------CCCCeeEEEEE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP-------KHPNIVTYKEA  150 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~-------~hpnIv~l~~~  150 (586)
                      .+.++|++.+.||+|+||+||+|++..+++.||+|++...    ....+.+.+|+.+++.+.       +||||++++++
T Consensus        34 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~  109 (397)
T 1wak_A           34 LFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDD  109 (397)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEE
T ss_pred             hcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecc
Confidence            3457899999999999999999999999999999998643    233467889999999983       27889999999


Q ss_pred             EE----eCCeEEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeecCC----
Q 043828          151 YE----DKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHEN-GVMHRDLKPENFLFADGS----  219 (586)
Q Consensus       151 ~~----~~~~~~iv~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~-~ivHrDlkp~Nill~~~~----  219 (586)
                      +.    ....+|+||||+ +++|.+++...  ..+++..++.++.||+.||.|||++ ||+||||||+|||++.+.    
T Consensus       110 ~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~  188 (397)
T 1wak_A          110 FKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIR  188 (397)
T ss_dssp             EEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHH
T ss_pred             eeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhh
Confidence            98    456899999999 56776766654  5699999999999999999999998 999999999999995221    


Q ss_pred             ------------------------------------------CCCceEEeecccccccCCCCceecccCCccccchhhhh
Q 043828          220 ------------------------------------------ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR  257 (586)
Q Consensus       220 ------------------------------------------~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~  257 (586)
                                                                ....+||+|||++......  ....+||+.|+|||++.
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~gt~~y~aPE~~~  266 (397)
T 1wak_A          189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEVLI  266 (397)
T ss_dssp             HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--SCSCCSCGGGCCHHHHH
T ss_pred             hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc--CccCCCCCcccCChhhc
Confidence                                                      1137999999999876432  34567999999999987


Q ss_pred             c-cCCCcchHHHHHHHHHHHhhCCCCCCCCC------HHHHHHHHHhCccCCC---------------C----------C
Q 043828          258 R-NYGPEIDVWSAGVIIYILLCGVPPFWAET------EEGIAHAIIRGKIDFE---------------R----------D  305 (586)
Q Consensus       258 ~-~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~~i~~~~~~~~---------------~----------~  305 (586)
                      + .|+.++|||||||++|+|++|..||...+      .......+.......+               .          .
T Consensus       267 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (397)
T 1wak_A          267 GSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLK  346 (397)
T ss_dssp             TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCC
T ss_pred             CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccC
Confidence            4 58999999999999999999999997644      2222222221000000               0          0


Q ss_pred             C-------------CCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCcc
Q 043828          306 P-------------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK  342 (586)
Q Consensus       306 ~-------------~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~  342 (586)
                      +             ....+..+.+||.+||+.||.+|||+.|+|+||||+
T Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          347 PWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             CCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred             CcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence            0             012345788999999999999999999999999997

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=2.6e-44  Score=363.51  Aligned_cols=258  Identities=22%  Similarity=0.347  Sum_probs=197.7

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCc---EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGE---TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      .++|++++.||+|+||.||+|.+..++.   .||+|++....... ...+.+.+|+.+++++ +||||+++++++.....
T Consensus        22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~   99 (323)
T 3qup_A           22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS-SDIEEFLREAACMKEF-DHPHVAKLVGVSLRSRA   99 (323)
T ss_dssp             ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------C-HHHHHHHHHHHHHTTC-CCTTBCCCCEEEECC--
T ss_pred             hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCH-HHHHHHHHHHHHHHHC-CCCceehhhceeecccc
Confidence            4689999999999999999998877665   89999987654332 3457889999999999 89999999999987765


Q ss_pred             E------EEEEeccCCCChHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCce
Q 043828          157 I------YLVMELCEGGELFDRIVNKG------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQL  224 (586)
Q Consensus       157 ~------~iv~E~~~gg~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~v  224 (586)
                      .      ++||||+++|+|.+++....      .+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+
T Consensus       100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli---~~~~~~  176 (323)
T 3qup_A          100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCML---AEDMTV  176 (323)
T ss_dssp             -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTSCE
T ss_pred             ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEE---cCCCCE
Confidence            5      99999999999999986532      58999999999999999999999999999999999999   567899


Q ss_pred             EEeecccccccCCCCc---eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCc
Q 043828          225 KAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGK  299 (586)
Q Consensus       225 kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~  299 (586)
                      ||+|||++........   .....+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+.........+..+.
T Consensus       177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~  256 (323)
T 3qup_A          177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN  256 (323)
T ss_dssp             EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC
T ss_pred             EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCC
Confidence            9999999987644322   223457889999999864 58999999999999999999 999999888877777776654


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHccCCCCCCCCC-------HHHHhcCCCccCCC
Q 043828          300 IDFERDPWPKVSKEAKELVKNMLDPNPYNRLT-------LEEVLENPWIKNDN  345 (586)
Q Consensus       300 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps-------~~eil~hp~~~~~~  345 (586)
                      ...   ..+.++..+.+||.+||+.||.+|||       +++++.|||+....
T Consensus       257 ~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~  306 (323)
T 3qup_A          257 RLK---QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTS  306 (323)
T ss_dssp             CCC---CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-------
T ss_pred             CCC---CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCC
Confidence            322   22468899999999999999999999       88899999998653

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=5.1e-44  Score=351.58  Aligned_cols=247  Identities=25%  Similarity=0.412  Sum_probs=214.4

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.+.||+|+||.||+|.+. +++.||+|++.....    ..+.+.+|+.+++++ +||||+++++++.+.+.+|+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~l   82 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICL   82 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEE
T ss_pred             hhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc----CHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCceEE
Confidence            368999999999999999999876 577899999976532    236789999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||+++++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||++......
T Consensus        83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~~~~~~~  159 (269)
T 4hcu_A           83 VFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDD  159 (269)
T ss_dssp             EEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CGGGCEEECCTTGGGGBCCH
T ss_pred             EEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEE---cCCCCEEecccccccccccc
Confidence            9999999999999965 4568999999999999999999999999999999999999   56689999999999865432


Q ss_pred             C--ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          239 E--QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       239 ~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      .  ......+|+.|+|||++. ..++.++|||||||++|+|++ |..||...+.......+..+.....   ...++..+
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  236 (269)
T 4hcu_A          160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK---PRLASTHV  236 (269)
T ss_dssp             HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC---CTTSCHHH
T ss_pred             ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCC---CCcCCHHH
Confidence            2  122345678899999987 568999999999999999999 9999999998888888776633222   24578999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .++|.+||+.||.+|||+.++++|
T Consensus       237 ~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          237 YQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHccCCcccCcCHHHHHHH
Confidence            999999999999999999999986

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=9.8e-44  Score=349.34  Aligned_cols=247  Identities=21%  Similarity=0.345  Sum_probs=214.7

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.+.||+|+||.||+|.+. ++..||+|++.....    ..+.+.+|+.+++++ +||||+++++++.+...+|+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~l   80 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM----SEDEFFQEAQTMMKL-SHPKLVKFYGVCSKEYPIYI   80 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB----CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEEE
T ss_pred             hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC----cHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCceEE
Confidence            468999999999999999999764 567899999965432    236789999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||+++++|.+++...+ .+++..++.++.|++.||.|||+.||+||||||+||++   +.++.+||+|||++......
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~~l~Dfg~~~~~~~~  157 (268)
T 3sxs_A           81 VTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV---DRDLCVKVSDFGMTRYVLDD  157 (268)
T ss_dssp             EEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEE---CTTCCEEECCTTCEEECCTT
T ss_pred             EEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEE---CCCCCEEEccCccceecchh
Confidence            999999999999997654 59999999999999999999999999999999999999   67789999999999876544


Q ss_pred             Cce--ecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          239 EQF--CEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       239 ~~~--~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      ...  ....+|+.|+|||++.+ .++.++||||||+++|+|++ |..||...........+..+......   ..+++.+
T Consensus       158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l  234 (268)
T 3sxs_A          158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRP---HLASDTI  234 (268)
T ss_dssp             CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC---TTSCHHH
T ss_pred             hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCC---CcChHHH
Confidence            322  23456778999999874 68999999999999999999 99999998888888777766543322   3578999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .+||.+||+.||.+|||+.+++++
T Consensus       235 ~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          235 YQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             HHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999999999986

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1.7e-44  Score=370.41  Aligned_cols=251  Identities=24%  Similarity=0.359  Sum_probs=209.0

Q ss_pred             ccCeeecceeccCCceEEEEEE-----EccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           80 LDKYTFGKELGRGEFGITHQCF-----EIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~-----~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      .++|++++.||+|+||.||+|.     +..+++.||+|++....  .......+.+|+.++.++.+||||+++++++...
T Consensus        21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~   98 (359)
T 3vhe_A           21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKP   98 (359)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred             ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecC
Confidence            4689999999999999999998     45567899999996543  2333567899999999998899999999999875


Q ss_pred             C-eEEEEEeccCCCChHHHHHhCCC-------------------------------------------------------
Q 043828          155 D-AIYLVMELCEGGELFDRIVNKGH-------------------------------------------------------  178 (586)
Q Consensus       155 ~-~~~iv~E~~~gg~L~~~l~~~~~-------------------------------------------------------  178 (586)
                      + .+++|||||++|+|.+++.....                                                       
T Consensus        99 ~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (359)
T 3vhe_A           99 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEE  178 (359)
T ss_dssp             TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------------------
T ss_pred             CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhh
Confidence            5 48999999999999999976433                                                       


Q ss_pred             -----------CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC---ceecc
Q 043828          179 -----------YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE---QFCEI  244 (586)
Q Consensus       179 -----------~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~  244 (586)
                                 +++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.......   .....
T Consensus       179 ~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  255 (359)
T 3vhe_A          179 EEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPDYVRKGDA  255 (359)
T ss_dssp             -----CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCGGGSCTTSCTTCEEC--C
T ss_pred             cccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---cCCCcEEEEeccceeeecccccchhcccc
Confidence                       8999999999999999999999999999999999999   567899999999998654322   22345


Q ss_pred             cCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHH-HHHHhCccCCCCCCCCCCCHHHHHHHHHc
Q 043828          245 VGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIA-HAIIRGKIDFERDPWPKVSKEAKELVKNM  321 (586)
Q Consensus       245 ~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~li~~~  321 (586)
                      .||+.|+|||++. ..++.++|||||||++|+|++ |..||.+....... ..+..+. ....  ...+++.+.++|.+|
T Consensus       256 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~l~~li~~~  332 (359)
T 3vhe_A          256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RMRA--PDYTTPEMYQTMLDC  332 (359)
T ss_dssp             EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTC-CCCC--CTTCCHHHHHHHHHH
T ss_pred             CCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCC-CCCC--CCCCCHHHHHHHHHH
Confidence            6889999999986 568999999999999999998 99999876644333 3333332 2222  245889999999999


Q ss_pred             cCCCCCCCCCHHHHhcC
Q 043828          322 LDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       322 L~~dp~~Rps~~eil~h  338 (586)
                      |+.||.+|||+.++++|
T Consensus       333 l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          333 WHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             ccCChhhCCCHHHHHHH
Confidence            99999999999999986

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=2.3e-44  Score=363.32  Aligned_cols=255  Identities=30%  Similarity=0.551  Sum_probs=215.9

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCCh---hcHHHHHHHHHHHHhCC-CCCCeeEEEEEEE
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEIMRHLP-KHPNIVTYKEAYE  152 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~---~~~~~~~~Ei~~l~~l~-~hpnIv~l~~~~~  152 (586)
                      ..+.++|++++.||+|+||.||+|++..+|+.||+|++........   .....+.+|+.+++++. .||||+++++++.
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~  118 (320)
T 3a99_A           39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE  118 (320)
T ss_dssp             -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred             CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence            3456789999999999999999999999999999999987654321   11234677999999995 3699999999999


Q ss_pred             eCCeEEEEEeccCC-CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          153 DKDAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       153 ~~~~~~iv~E~~~g-g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                      ..+.+++|||++.+ ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++  ...+.+||+|||+
T Consensus       119 ~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~--~~~~~~kL~Dfg~  196 (320)
T 3a99_A          119 RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID--LNRGELKLIDFGS  196 (320)
T ss_dssp             CSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE--TTTTEEEECCCTT
T ss_pred             cCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEe--CCCCCEEEeeCcc
Confidence            99999999999976 89999999888999999999999999999999999999999999999994  2567899999999


Q ss_pred             ccccCCCCceecccCCccccchhhhhc-c-CCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCC
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLRR-N-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK  309 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~~-~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  309 (586)
                      +...... ......||+.|+|||++.+ . ++.++|||||||++|+|++|..||....      .+......++    ..
T Consensus       197 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~~----~~  265 (320)
T 3a99_A          197 GALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFR----QR  265 (320)
T ss_dssp             CEECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCCCCS----SC
T ss_pred             ccccccc-cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hhhccccccc----cc
Confidence            9876533 3345679999999999864 3 3678999999999999999999996532      2333333322    46


Q ss_pred             CCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          310 VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +++.+.+||.+||..||.+|||+.++++||||+..
T Consensus       266 ~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~  300 (320)
T 3a99_A          266 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV  300 (320)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCc
Confidence            88999999999999999999999999999999864

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=1.7e-44  Score=362.65  Aligned_cols=245  Identities=24%  Similarity=0.381  Sum_probs=206.5

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++++.||+|+||+||+|.+..+++.||+|++...   .....+.+.+|+.+++++ +||||+++++++.++..+++
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~l   84 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCL-EHPNVLKFIGVLYKDKRLNF   84 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhC-CCcCcccEEEEEecCCeeEE
Confidence            36899999999999999999999999999999998543   344557889999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||+++++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||++......
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~~  161 (310)
T 3s95_A           85 ITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV---RENKNVVVADFGLARLMVDE  161 (310)
T ss_dssp             EEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE---CTTSCEEECCCTTCEECC--
T ss_pred             EEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEE---CCCCCEEEeecccceecccc
Confidence            9999999999999987 5679999999999999999999999999999999999999   67789999999999865432


Q ss_pred             Cce---------------ecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHH-----HHHHHHh
Q 043828          239 EQF---------------CEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEG-----IAHAIIR  297 (586)
Q Consensus       239 ~~~---------------~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----~~~~i~~  297 (586)
                      ...               ....||+.|+|||++.+ .++.++|||||||++|+|++|..||.......     .......
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~  241 (310)
T 3s95_A          162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD  241 (310)
T ss_dssp             ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH
T ss_pred             cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc
Confidence            211               14679999999999874 68999999999999999999999986532110     0001111


Q ss_pred             CccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          298 GKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .      ...+.+++.+.+||.+||+.||.+|||+.++++
T Consensus       242 ~------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          242 R------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             H------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             c------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            0      012457889999999999999999999999987

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=1e-43  Score=358.31  Aligned_cols=257  Identities=25%  Similarity=0.351  Sum_probs=196.7

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++++.||+|+||.||+|.+..+|+.||+|++...... ......+..+..+++.+ +||||+++++++...+.+|+
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~-~h~~i~~~~~~~~~~~~~~l  101 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK-EENKRILMDLDVVLKSH-DCPYIVQCFGTFITNTDVFI  101 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCH-HHHHHHHHHHHHHHHTT-TCTTBCCEEEEEECSSEEEE
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccc-hHHHHHHHHHHHHHHhc-CCCceeeEEEEEecCCcEEE
Confidence            46899999999999999999999999999999999765422 11223344444566666 99999999999999999999


Q ss_pred             EEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          160 VMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHEN-GVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      ||||+ ++.+..+... ...+++..+..++.||+.||.|||++ ||+||||||+||++   +.++.+||+|||++.....
T Consensus       102 v~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~---~~~~~~kl~dfg~~~~~~~  177 (318)
T 2dyl_A          102 AMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGQIKLCDFGISGRLVD  177 (318)
T ss_dssp             EECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEE---CTTSCEEECCCTTC-----
T ss_pred             EEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEE---CCCCCEEEEECCCchhccC
Confidence            99999 5555554443 56799999999999999999999995 99999999999999   5678999999999987655


Q ss_pred             CCceecccCCccccchhhhh------ccCCCcchHHHHHHHHHHHhhCCCCCCC-CCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          238 GEQFCEIVGSPYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPFWA-ETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~------~~~~~~~DiwslG~il~~ll~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      ........||+.|+|||++.      ..++.++|||||||++|+|++|..||.. .........+........ +....+
T Consensus       178 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~  256 (318)
T 2dyl_A          178 DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLL-PGHMGF  256 (318)
T ss_dssp             ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCC-CSSSCC
T ss_pred             CccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCC-CccCCC
Confidence            54445567999999999983      3578899999999999999999999986 345555666655543322 223468


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      ++.+.+||.+||..||.+|||+.++++||||+.
T Consensus       257 ~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (318)
T 2dyl_A          257 SGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR  289 (318)
T ss_dssp             CHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhhCHHHHh
Confidence            999999999999999999999999999999975

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=4.2e-44  Score=363.05  Aligned_cols=249  Identities=18%  Similarity=0.208  Sum_probs=208.3

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      +.++|++.+.||+|+||.||+|.+..+|+.||+|++......     +.+.+|+.+++.|.+||||+++++++......|
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~   81 (330)
T 2izr_A            7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA-----PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNA   81 (330)
T ss_dssp             ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS-----CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEE
T ss_pred             EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch-----HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccE
Confidence            346899999999999999999999999999999998755322     357889999999988999999999999999999


Q ss_pred             EEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCc-----eEEeecccc
Q 043828          159 LVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQ-----LKAIDFGLS  232 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~-----vkl~Dfg~a  232 (586)
                      +||||+ +++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++   ..+.     +||+|||++
T Consensus        82 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~---~~~~~~~~~~kl~DFg~a  157 (330)
T 2izr_A           82 MVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIG---RPGNKTQQVIHIIDFALA  157 (330)
T ss_dssp             EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---CGGGTCTTSEEECCCTTC
T ss_pred             EEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeec---cCCCCCCceEEEEEcccc
Confidence            999999 9999999986 46799999999999999999999999999999999999994   4444     999999999


Q ss_pred             cccCCCCc--------eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCC---CHHHHHHHHHhCcc
Q 043828          233 IFFKPGEQ--------FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAE---TEEGIAHAIIRGKI  300 (586)
Q Consensus       233 ~~~~~~~~--------~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~---~~~~~~~~i~~~~~  300 (586)
                      ........        .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.   ...+....+.....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~  237 (330)
T 2izr_A          158 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKR  237 (330)
T ss_dssp             EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHH
T ss_pred             eeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhc
Confidence            87543321        245689999999999874 6899999999999999999999999874   34444555544433


Q ss_pred             CCCCCC-CCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          301 DFERDP-WPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       301 ~~~~~~-~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ..+... ...++ .+.+||.+||..||.+||+++++++
T Consensus       238 ~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          238 ATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             cCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            332221 12234 9999999999999999999998886

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=1.2e-43  Score=349.15  Aligned_cols=252  Identities=27%  Similarity=0.450  Sum_probs=204.1

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCC-hhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-EIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~-~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      .++|++.+.||+|+||.||+|.+  +|..+|+|++....... ....+.+.+|+.+++.+ +||||+++++++.+.+.+|
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~   82 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-KHPNIIALRGVCLKEPNLC   82 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHC-CCTTBCCEEEEECCC--CE
T ss_pred             hhheeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-CCCCEeeEEEEEecCCceE
Confidence            46899999999999999999986  58899999987653322 33457789999999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCceEeecCC-----CCCceEEeecc
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG---VMHRDLKPENFLFADGS-----ENSQLKAIDFG  230 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivHrDlkp~Nill~~~~-----~~~~vkl~Dfg  230 (586)
                      +||||+++++|.+++. ...+++..++.++.|++.||.|||++|   |+||||||+||+++...     ..+.+||+|||
T Consensus        83 lv~e~~~~~~L~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg  161 (271)
T 3dtc_A           83 LVMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG  161 (271)
T ss_dssp             EEEECCTTEEHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred             EEEEcCCCCCHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence            9999999999988775 457999999999999999999999999   89999999999995321     26789999999


Q ss_pred             cccccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCC
Q 043828          231 LSIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK  309 (586)
Q Consensus       231 ~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  309 (586)
                      ++....... .....||+.|+|||++.+ .++.++||||||+++|+|++|..||.+.+.......+.......+.+  ..
T Consensus       162 ~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~  238 (271)
T 3dtc_A          162 LAREWHRTT-KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIP--ST  238 (271)
T ss_dssp             C--------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCC--TT
T ss_pred             ccccccccc-ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCC--cc
Confidence            998654332 234579999999999864 58899999999999999999999999988887777777665544332  46


Q ss_pred             CCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          310 VSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +++.+.+||.+||+.||.+|||+.|++++
T Consensus       239 ~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          239 CPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            88999999999999999999999999875

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=1.7e-43  Score=355.39  Aligned_cols=255  Identities=27%  Similarity=0.490  Sum_probs=205.3

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ...++|++.+.||+|+||.||+|.+..+|+.||+|++.............+.+|+.+++++ +||||+++++++...+.+
T Consensus        29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~  107 (310)
T 2wqm_A           29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNEL  107 (310)
T ss_dssp             SSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEE
T ss_pred             ccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCcE
Confidence            3457899999999999999999999999999999999875555555567889999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          158 YLVMELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                      ++||||+++++|.+++..    ...+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.
T Consensus       108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~---~~~~~~kl~Dfg~~~  184 (310)
T 2wqm_A          108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI---TATGVVKLGDLGLGR  184 (310)
T ss_dssp             EEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCC----
T ss_pred             EEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEE---cCCCCEEEEecccee
Confidence            999999999999998864    4568999999999999999999999999999999999999   567899999999987


Q ss_pred             ccCCCC-ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCC--CHHHHHHHHHhCccCCCCCCCCC
Q 043828          234 FFKPGE-QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAE--TEEGIAHAIIRGKIDFERDPWPK  309 (586)
Q Consensus       234 ~~~~~~-~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~~i~~~~~~~~~~~~~~  309 (586)
                      ...... ......|++.|+|||++. ..++.++|||||||++|+|++|..||.+.  ........+.....  +......
T Consensus       185 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~  262 (310)
T 2wqm_A          185 FFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY--PPLPSDH  262 (310)
T ss_dssp             --------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCS--CCCCTTT
T ss_pred             eecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccC--CCCcccc
Confidence            654332 223457899999999986 46888999999999999999999999764  33344455544433  2233356


Q ss_pred             CCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          310 VSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ++..+.+||.+||..||.+|||+.+++++
T Consensus       263 ~~~~l~~li~~~l~~dp~~Rps~~~il~~  291 (310)
T 2wqm_A          263 YSEELRQLVNMCINPDPEKRPDVTYVYDV  291 (310)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            89999999999999999999999999874

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.1e-43  Score=365.20  Aligned_cols=253  Identities=24%  Similarity=0.370  Sum_probs=217.9

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccC-------CcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIET-------GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEA  150 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~-------~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~  150 (586)
                      ...++|.+++.||+|+||.||+|.+..+       +..||+|++....  .......+.+|+.+++++.+||||++++++
T Consensus        66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~  143 (382)
T 3tt0_A           66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGA  143 (382)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc--CHHHHHHHHHHHHHHHHhcCCchhhhheee
Confidence            3457899999999999999999987543       3579999987653  334457789999999999889999999999


Q ss_pred             EEeCCeEEEEEeccCCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceE
Q 043828          151 YEDKDAIYLVMELCEGGELFDRIVNKG----------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFL  214 (586)
Q Consensus       151 ~~~~~~~~iv~E~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nil  214 (586)
                      +...+.+|+||||+++|+|.+++....                .+++..+..++.||+.||.|||++||+||||||+|||
T Consensus       144 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIl  223 (382)
T 3tt0_A          144 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL  223 (382)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred             eccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEE
Confidence            999999999999999999999998753                4899999999999999999999999999999999999


Q ss_pred             eecCCCCCceEEeecccccccCCCC---ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhh-CCCCCCCCCHH
Q 043828          215 FADGSENSQLKAIDFGLSIFFKPGE---QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLC-GVPPFWAETEE  289 (586)
Q Consensus       215 l~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~  289 (586)
                      +   +.++.+||+|||++.......   ......||+.|+|||++.+ .++.++|||||||++|+|++ |..||......
T Consensus       224 l---~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~  300 (382)
T 3tt0_A          224 V---TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE  300 (382)
T ss_dssp             E---CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH
T ss_pred             E---cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence            9   567899999999998664332   2234567889999999864 68899999999999999999 99999999888


Q ss_pred             HHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          290 GIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       290 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ++...+..+....   ....++..+.+||.+||+.||.+|||+.+++++
T Consensus       301 ~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          301 ELFKLLKEGHRMD---KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             HHHHHHHTTCCCC---CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHcCCCCC---CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            8887777664322   224689999999999999999999999999986

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=3.5e-44  Score=363.20  Aligned_cols=257  Identities=23%  Similarity=0.357  Sum_probs=190.5

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHH-HHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVE-IMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~-~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      .++|++++.||+|+||.||+|.+..+|+.||+|++....  .......+..|+. +++.+ +||||+++++++...+.+|
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~~~-~h~niv~~~~~~~~~~~~~   97 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV--DEKEQKQLLMDLDVVMRSS-DCPYIVQFYGALFREGDCW   97 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC--CHHHHHHHHHHHHHHHSSC-CCTTBCCEEEEEECSSEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc--CchHHHHHHHHHHHHHHcC-CCCcEeeeeeEEEeCCceE
Confidence            478999999999999999999999999999999997653  2223345666766 45555 9999999999999999999


Q ss_pred             EEEeccCCCChHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          159 LVMELCEGGELFDRIVN-----KGHYTERAAAAVGKTILRIVKVCHEN-GVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                      +||||+++ +|.+++..     ...+++..+..++.|++.||.|||+. ||+||||||+||++   +.++.+||+|||++
T Consensus        98 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll---~~~~~~kl~Dfg~~  173 (327)
T 3aln_A           98 ICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILL---DRSGNIKLCDFGIS  173 (327)
T ss_dssp             EEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEE---ETTTEEEECCCSSS
T ss_pred             EEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEE---cCCCCEEEccCCCc
Confidence            99999975 77777653     56799999999999999999999999 99999999999999   56789999999999


Q ss_pred             cccCCCCceecccCCccccchhhhh-----ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHH-HHHHHHHhCc-cCCCCC
Q 043828          233 IFFKPGEQFCEIVGSPYYMAPEVLR-----RNYGPEIDVWSAGVIIYILLCGVPPFWAETEE-GIAHAIIRGK-IDFERD  305 (586)
Q Consensus       233 ~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~-~~~~~~  305 (586)
                      .............||+.|+|||++.     ..++.++|||||||++|+|++|..||...... .....+..+. ..++..
T Consensus       174 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  253 (327)
T 3aln_A          174 GQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNS  253 (327)
T ss_dssp             CC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCC
T ss_pred             eecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCc
Confidence            8765544444557999999999983     35889999999999999999999999764321 1111111111 122222


Q ss_pred             CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       306 ~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      .+..+++.+.+||.+||..||.+|||+.++++||||..
T Consensus       254 ~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~  291 (327)
T 3aln_A          254 EEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILM  291 (327)
T ss_dssp             SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             ccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHH
Confidence            33568999999999999999999999999999999975

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=1.6e-43  Score=350.64  Aligned_cols=247  Identities=22%  Similarity=0.344  Sum_probs=212.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++++.||+|+||+||+|.+. ++..||+|++.....    ..+.+.+|+.+++++ +||||+++++++.+.+.+|+
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~l   96 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFI   96 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSEEE
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC----CHHHHHHHHHHHhcC-CCCCEeeEEEEEecCCCeEE
Confidence            468999999999999999999765 677899999975532    236789999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||+++++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||++......
T Consensus        97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili---~~~~~~kl~Dfg~~~~~~~~  173 (283)
T 3gen_A           97 ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDD  173 (283)
T ss_dssp             EECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE---CTTSCEEECSTTGGGGBCCH
T ss_pred             EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEE---cCCCCEEEcccccccccccc
Confidence            9999999999999976 5679999999999999999999999999999999999999   57789999999999865432


Q ss_pred             Cc--eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          239 EQ--FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       239 ~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      ..  .....+|+.|+|||++. ..++.++|||||||++|+|++ |..||...+.......+..+......   ..+++.+
T Consensus       174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l  250 (283)
T 3gen_A          174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP---HLASEKV  250 (283)
T ss_dssp             HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC---TTCCHHH
T ss_pred             ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCC---CcCCHHH
Confidence            21  22345678899999987 568999999999999999998 99999999988888887776433322   3578999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .+||.+||+.||.+|||+.++++|
T Consensus       251 ~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          251 YTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             HHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHccCChhHCcCHHHHHHH
Confidence            999999999999999999999986

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=8.4e-44  Score=364.48  Aligned_cols=259  Identities=24%  Similarity=0.417  Sum_probs=212.3

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCC-cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCC------eeEEEEE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETG-ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN------IVTYKEA  150 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~-~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpn------Iv~l~~~  150 (586)
                      .+.++|++.+.||+|+||+||+|.+..++ ..||+|++...    ....+.+.+|+.+++.+ .|++      ++.++++
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l-~~~~~~~~~~~~~~~~~   90 (355)
T 2eu9_A           16 WLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKI-KEKDKENKFLCVLMSDW   90 (355)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHH-HHHCTTSCSCBCCEEEE
T ss_pred             eecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHH-hhcCCCCceeEEEeeee
Confidence            34579999999999999999999998777 68999998643    23346788899999998 5655      9999999


Q ss_pred             EEeCCeEEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecC----------
Q 043828          151 YEDKDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADG----------  218 (586)
Q Consensus       151 ~~~~~~~~iv~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~----------  218 (586)
                      +...+.+|+||||+ +++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||+...          
T Consensus        91 ~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~  169 (355)
T 2eu9_A           91 FNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHK  169 (355)
T ss_dssp             EEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-
T ss_pred             eeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccc
Confidence            99999999999999 66777777664  369999999999999999999999999999999999999432          


Q ss_pred             ------CCCCceEEeecccccccCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHH
Q 043828          219 ------SENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGI  291 (586)
Q Consensus       219 ------~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~  291 (586)
                            ...+.+||+|||++.....  ......||+.|+|||++. ..++.++|||||||++|+|++|..||........
T Consensus       170 ~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~  247 (355)
T 2eu9_A          170 SCEEKSVKNTSIRVADFGSATFDHE--HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH  247 (355)
T ss_dssp             CCCEEEESCCCEEECCCTTCEETTS--CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             cccccccCCCcEEEeecCccccccc--cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                  2467899999999986433  234568999999999986 4689999999999999999999999998877665


Q ss_pred             HHHHHhCccCCCC----------------CCC------------------------CCCCHHHHHHHHHccCCCCCCCCC
Q 043828          292 AHAIIRGKIDFER----------------DPW------------------------PKVSKEAKELVKNMLDPNPYNRLT  331 (586)
Q Consensus       292 ~~~i~~~~~~~~~----------------~~~------------------------~~~~~~~~~li~~~L~~dp~~Rps  331 (586)
                      ...+......++.                ..|                        ...+..+.+||.+||..||.+|||
T Consensus       248 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt  327 (355)
T 2eu9_A          248 LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRIT  327 (355)
T ss_dssp             HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcC
Confidence            5544332111110                001                        112357889999999999999999


Q ss_pred             HHHHhcCCCccCC
Q 043828          332 LEEVLENPWIKND  344 (586)
Q Consensus       332 ~~eil~hp~~~~~  344 (586)
                      +.|+|+||||+..
T Consensus       328 ~~e~l~hp~f~~~  340 (355)
T 2eu9_A          328 LAEALLHPFFAGL  340 (355)
T ss_dssp             HHHHTTSGGGGGC
T ss_pred             HHHHhcChhhcCC
Confidence            9999999999864

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=6e-44  Score=363.94  Aligned_cols=251  Identities=22%  Similarity=0.304  Sum_probs=216.5

Q ss_pred             cccCeeecceeccCCceEEEEEEEc-----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEI-----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED  153 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~  153 (586)
                      ..++|++++.||+|+||.||+|.+.     .+++.||+|++....  .....+.+.+|+.+++++ +||||+++++++.+
T Consensus        45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~  121 (343)
T 1luf_A           45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEF-DNPNIVKLLGVCAV  121 (343)
T ss_dssp             CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECS
T ss_pred             cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEcc
Confidence            3578999999999999999999986     455899999987543  233456789999999999 89999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhC------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Q 043828          154 KDAIYLVMELCEGGELFDRIVNK------------------------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLK  209 (586)
Q Consensus       154 ~~~~~iv~E~~~gg~L~~~l~~~------------------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlk  209 (586)
                      .+.+|+||||+++|+|.+++...                        ..+++..++.++.||+.||.|||++||+|||||
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlk  201 (343)
T 1luf_A          122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLA  201 (343)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            99999999999999999999763                        568999999999999999999999999999999


Q ss_pred             CCceEeecCCCCCceEEeecccccccCCCC---ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCC
Q 043828          210 PENFLFADGSENSQLKAIDFGLSIFFKPGE---QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFW  284 (586)
Q Consensus       210 p~Nill~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~  284 (586)
                      |+||++   +.++.+||+|||++.......   ......||+.|+|||++. ..++.++|||||||++|+|++ |..||.
T Consensus       202 p~NIl~---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~  278 (343)
T 1luf_A          202 TRNCLV---GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY  278 (343)
T ss_dssp             GGGEEE---CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred             cceEEE---CCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence            999999   567899999999997653321   223456889999999986 468999999999999999999 999999


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          285 AETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       285 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +.+..+....+..+.....   ...++..+.+||.+||+.||.+|||+.+++++
T Consensus       279 ~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          279 GMAHEEVIYYVRDGNILAC---PENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             TSCHHHHHHHHHTTCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCChHHHHHHHhCCCcCCC---CCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            9998888888777654322   24688999999999999999999999999874

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=1.7e-43  Score=355.90  Aligned_cols=256  Identities=28%  Similarity=0.471  Sum_probs=210.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCC-CCCeeEEEEEEEeCCeEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK-HPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~-hpnIv~l~~~~~~~~~~~  158 (586)
                      .++|++++.||+|+||.||+|.+. +++.||+|++..... .....+.+.+|+.+++++.. ||||+++++++...+.+|
T Consensus        27 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~  104 (313)
T 3cek_A           27 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY  104 (313)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred             cceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccc-cccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence            357999999999999999999874 588999999976543 23445788999999999943 699999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      +||| +.+++|.+++.....+++..+..++.||+.||.|||++||+||||||+||++.    ++.+||+|||++......
T Consensus       105 lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~----~~~~kL~Dfg~~~~~~~~  179 (313)
T 3cek_A          105 MVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPD  179 (313)
T ss_dssp             EEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TTEEEECCCSSSCC----
T ss_pred             EEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE----CCeEEEeeccccccccCc
Confidence            9999 55889999999888999999999999999999999999999999999999994    368999999999876433


Q ss_pred             Cc---eecccCCccccchhhhhc------------cCCCcchHHHHHHHHHHHhhCCCCCCCCC-HHHHHHHHHhCccCC
Q 043828          239 EQ---FCEIVGSPYYMAPEVLRR------------NYGPEIDVWSAGVIIYILLCGVPPFWAET-EEGIAHAIIRGKIDF  302 (586)
Q Consensus       239 ~~---~~~~~gt~~y~aPE~l~~------------~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~~i~~~~~~~  302 (586)
                      ..   .....||+.|+|||++..            .++.++|||||||++|+|++|..||.... .......+.......
T Consensus       180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  259 (313)
T 3cek_A          180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI  259 (313)
T ss_dssp             ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCC
T ss_pred             cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhccccc
Confidence            21   234579999999999853            57889999999999999999999997653 333344444433322


Q ss_pred             CCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          303 ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       303 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ..  ....+..+.+||.+||..||.+|||+.++|+||||+..
T Consensus       260 ~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~  299 (313)
T 3cek_A          260 EF--PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  299 (313)
T ss_dssp             CC--CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC
T ss_pred             CC--cccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCC
Confidence            22  23457899999999999999999999999999999864

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=1.2e-43  Score=356.99  Aligned_cols=251  Identities=22%  Similarity=0.335  Sum_probs=214.9

Q ss_pred             cccCeeecceeccCCceEEEEEEEc-----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEI-----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED  153 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~  153 (586)
                      ..++|++.+.||+|+||.||+|.+.     .++..||+|++....  .....+.+.+|+.+++.+ +||||+++++++.+
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~   97 (314)
T 2ivs_A           21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQV-NHPHVIKLYGACSQ   97 (314)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECS
T ss_pred             chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhC-CCCceeeEEEEEec
Confidence            3568999999999999999999874     455889999987543  334457789999999999 89999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhCCC------------------------CCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Q 043828          154 KDAIYLVMELCEGGELFDRIVNKGH------------------------YTERAAAAVGKTILRIVKVCHENGVMHRDLK  209 (586)
Q Consensus       154 ~~~~~iv~E~~~gg~L~~~l~~~~~------------------------~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlk  209 (586)
                      .+.+|+||||+++++|.+++.....                        +++..+..++.||+.||.|||++||+|||||
T Consensus        98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dik  177 (314)
T 2ivs_A           98 DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLA  177 (314)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccc
Confidence            9999999999999999999986543                        8999999999999999999999999999999


Q ss_pred             CCceEeecCCCCCceEEeecccccccCCCCce---ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCC
Q 043828          210 PENFLFADGSENSQLKAIDFGLSIFFKPGEQF---CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFW  284 (586)
Q Consensus       210 p~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~  284 (586)
                      |+||++   +.++.+||+|||++.........   ....+|+.|+|||++. ..++.++|||||||++|+|++ |..||.
T Consensus       178 p~NIli---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~  254 (314)
T 2ivs_A          178 ARNILV---AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP  254 (314)
T ss_dssp             GGGEEE---ETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred             hheEEE---cCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            999999   46778999999999876443322   2345788999999986 468999999999999999999 999999


Q ss_pred             CCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          285 AETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       285 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +.........+..+...   .....+++.+.+||.+||+.||.+|||+.+++++
T Consensus       255 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          255 GIPPERLFNLLKTGHRM---ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             TCCGGGHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCHHHHHHHhhcCCcC---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            88877777766655422   2234689999999999999999999999999875

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=1.8e-43  Score=351.09  Aligned_cols=251  Identities=22%  Similarity=0.356  Sum_probs=207.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhc----HHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID----IDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~----~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++..........    .+.+.+|+.+++++ +||||+++++++.+..
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNIVKLYGLMHNPP   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-CCTTBCCEEEEETTTT
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-CCCCchhhheeecCCC
Confidence            468999999999999999999999999999999987654333211    26788999999999 8999999999987655


Q ss_pred             eEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCceEeecCC--CCCceEEeecc
Q 043828          156 AIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENG--VMHRDLKPENFLFADGS--ENSQLKAIDFG  230 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~--ivHrDlkp~Nill~~~~--~~~~vkl~Dfg  230 (586)
                        ++||||+++|+|.+.+... ..+++..+..++.|++.||.|||++|  |+||||||+||++....  ....+||+|||
T Consensus        97 --~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg  174 (287)
T 4f0f_A           97 --RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG  174 (287)
T ss_dssp             --EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred             --eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence              6999999999998888654 46999999999999999999999999  99999999999995321  12239999999


Q ss_pred             cccccCCCCceecccCCccccchhhhh---ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHH--HHHHHHhCccCCCCC
Q 043828          231 LSIFFKPGEQFCEIVGSPYYMAPEVLR---RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEG--IAHAIIRGKIDFERD  305 (586)
Q Consensus       231 ~a~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i~~~~~~~~~~  305 (586)
                      ++....  .......||+.|+|||++.   ..++.++|||||||++|+|++|..||...+...  ....+.......  .
T Consensus       175 ~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~  250 (287)
T 4f0f_A          175 LSQQSV--HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRP--T  250 (287)
T ss_dssp             TCBCCS--SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCC--C
T ss_pred             cccccc--ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCC--C
Confidence            997543  2345578999999999983   357889999999999999999999997654333  234444433322  2


Q ss_pred             CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       306 ~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ....+++.+.+||.+||+.||.+|||+.++++
T Consensus       251 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          251 IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            23568999999999999999999999999986

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=1.1e-43  Score=359.45  Aligned_cols=251  Identities=24%  Similarity=0.354  Sum_probs=212.1

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEE--EEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETY--ACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~--avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .++|++.+.||+|+||.||+|++..+|..+  |+|.+....  .......+.+|+.+++++.+||||+++++++.+.+.+
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~  101 (327)
T 1fvr_A           24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL  101 (327)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred             HHHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc--chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence            468999999999999999999999888865  889886532  2223457889999999998899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCC
Q 043828          158 YLVMELCEGGELFDRIVNKG----------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSEN  221 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~  221 (586)
                      |+||||+++++|.+++....                .+++..++.++.||+.||.|||++||+||||||+||++   +.+
T Consensus       102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~---~~~  178 (327)
T 1fvr_A          102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GEN  178 (327)
T ss_dssp             EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CGG
T ss_pred             EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEE---cCC
Confidence            99999999999999997654                69999999999999999999999999999999999999   567


Q ss_pred             CceEEeecccccccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCc
Q 043828          222 SQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGK  299 (586)
Q Consensus       222 ~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~  299 (586)
                      +.+||+|||++.............+++.|+|||++.+ .++.++|||||||++|+|++ |..||.+.+.......+..+.
T Consensus       179 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~  258 (327)
T 1fvr_A          179 YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY  258 (327)
T ss_dssp             GCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTC
T ss_pred             CeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCC
Confidence            8999999999875433223334567889999999864 57899999999999999998 999999988887777665542


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          300 IDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       300 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .   ......+++.+.+||.+||..||.+|||+.+++++
T Consensus       259 ~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          259 R---LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             C---CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             C---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            2   12224688999999999999999999999999986

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=2e-43  Score=352.60  Aligned_cols=254  Identities=19%  Similarity=0.247  Sum_probs=211.5

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      +.++|++.+.||+|+||.||+|.+..+|+.||+|++......     ..+.+|+.+++.+.+||||+++++++......|
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~   82 (298)
T 1csn_A            8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA-----PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV   82 (298)
T ss_dssp             ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS-----CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE
T ss_pred             cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc-----HHHHHHHHHHHHHhcCCCCCeEEeecCCCceeE
Confidence            456899999999999999999999999999999998654322     357889999999988999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecC--CCCCceEEeeccccccc
Q 043828          159 LVMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADG--SENSQLKAIDFGLSIFF  235 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~--~~~~~vkl~Dfg~a~~~  235 (586)
                      +||||+ +++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+||+++.+  .....+||+|||++...
T Consensus        83 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~  161 (298)
T 1csn_A           83 LVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY  161 (298)
T ss_dssp             EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred             EEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence            999999 999999998754 59999999999999999999999999999999999999532  12334999999999876


Q ss_pred             CCCC--------ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCC---CHHHHHHHHHhCccCCC
Q 043828          236 KPGE--------QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAE---TEEGIAHAIIRGKIDFE  303 (586)
Q Consensus       236 ~~~~--------~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~---~~~~~~~~i~~~~~~~~  303 (586)
                      ....        ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...   ........+.......+
T Consensus       162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  241 (298)
T 1csn_A          162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP  241 (298)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC
T ss_pred             ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCcc
Confidence            5432        1245679999999999864 6899999999999999999999999873   34444444433322221


Q ss_pred             -CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          304 -RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       304 -~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                       ....+.+++.+.+||.+||+.||.+|||++++++.
T Consensus       242 ~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~  277 (298)
T 1csn_A          242 LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGL  277 (298)
T ss_dssp             HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred             HHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence             11224688999999999999999999999999864

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=8.1e-44  Score=367.46  Aligned_cols=249  Identities=22%  Similarity=0.325  Sum_probs=213.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++....  .......+.+|+.+|+++ +||||+++++++...+.+|+
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~l  189 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYI  189 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS--CHHHHTTTTHHHHHHTTC-CCTTBCCEEEEECSSSSCEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC--CHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEecCCCcEE
Confidence            468999999999999999999999899999999986542  222335678899999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      |||||++|+|.+++... ..+++..+..++.|++.||.|||++||+||||||+|||+   +.++.+||+|||++......
T Consensus       190 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~---~~~~~~kl~DfG~s~~~~~~  266 (377)
T 3cbl_A          190 VMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV---TEKNVLKISDFGMSREEADG  266 (377)
T ss_dssp             EEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCGGGCEECTTS
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEE---cCCCcEEECcCCCceecCCC
Confidence            99999999999999764 469999999999999999999999999999999999999   56789999999999865432


Q ss_pred             Ccee---cccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          239 EQFC---EIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       239 ~~~~---~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ....   ...+++.|+|||++. +.++.++|||||||++|+|++ |..||...+.......+..+.. .+  ....++..
T Consensus       267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~  343 (377)
T 3cbl_A          267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGR-LP--CPELCPDA  343 (377)
T ss_dssp             EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCC-CC--CCTTCCHH
T ss_pred             ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-CC--CCCCCCHH
Confidence            2111   123467899999986 568899999999999999998 9999999888887777665532 22  22457899


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhc
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +.+||.+||+.||.+|||+.++++
T Consensus       344 l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          344 VFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCCchhCcCHHHHHH
Confidence            999999999999999999999986

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=1.4e-43  Score=358.75  Aligned_cols=258  Identities=20%  Similarity=0.236  Sum_probs=215.6

Q ss_pred             cccCeeecceeccCCceEEEEEE-----EccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe
Q 043828           79 ILDKYTFGKELGRGEFGITHQCF-----EIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED  153 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~-----~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~  153 (586)
                      ..++|++++.||+|+||.||+|+     +..++..||+|++....  .......+.+|+.+++++ +||||+++++++..
T Consensus        28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~  104 (327)
T 2yfx_A           28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKF-NHQNIVRCIGVSLQ  104 (327)
T ss_dssp             CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEECS
T ss_pred             ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc--chhhHHHHHHHHHHHhhC-CCCCCCeEEEEEcC
Confidence            34689999999999999999998     55678899999986432  233456788999999999 89999999999999


Q ss_pred             CCeEEEEEeccCCCChHHHHHhCC-------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEE
Q 043828          154 KDAIYLVMELCEGGELFDRIVNKG-------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKA  226 (586)
Q Consensus       154 ~~~~~iv~E~~~gg~L~~~l~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl  226 (586)
                      ...+|+||||+++++|.+++....       .+++..++.++.||+.||.|||++||+||||||+|||++.......+||
T Consensus       105 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl  184 (327)
T 2yfx_A          105 SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKI  184 (327)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEE
Confidence            999999999999999999998753       4899999999999999999999999999999999999964445667999


Q ss_pred             eecccccccCCCC---ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccC
Q 043828          227 IDFGLSIFFKPGE---QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKID  301 (586)
Q Consensus       227 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~  301 (586)
                      +|||++.......   ......||+.|+|||++. ..++.++|||||||++|+|++ |..||...........+..+...
T Consensus       185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~  264 (327)
T 2yfx_A          185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM  264 (327)
T ss_dssp             CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC
T ss_pred             CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCC
Confidence            9999987653322   223456899999999986 568999999999999999998 99999998888888777766432


Q ss_pred             CCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCcc
Q 043828          302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK  342 (586)
Q Consensus       302 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~  342 (586)
                      .   ....++..+.+||.+||+.||.+|||+.++++|+|+-
T Consensus       265 ~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          265 D---PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             C---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             C---CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            2   2246889999999999999999999999999998864

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=8e-44  Score=367.38  Aligned_cols=261  Identities=21%  Similarity=0.375  Sum_probs=207.4

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCC----------CCCCeeEEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP----------KHPNIVTYKE  149 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~----------~hpnIv~l~~  149 (586)
                      .++|++.+.||+|+||+||+|.+..+++.||+|++....    ...+.+.+|+.+++++.          .||||+++++
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~   93 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLD   93 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc----cchhhhhHHHHHHHHhhcccccchhccccchHHHHHH
Confidence            368999999999999999999999999999999986432    23467888999999883          1899999999


Q ss_pred             EEEeCC----eEEEEEeccCCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCceEeecC---C
Q 043828          150 AYEDKD----AIYLVMELCEGGELFDRIVN--KGHYTERAAAAVGKTILRIVKVCHEN-GVMHRDLKPENFLFADG---S  219 (586)
Q Consensus       150 ~~~~~~----~~~iv~E~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivHrDlkp~Nill~~~---~  219 (586)
                      ++...+    .+++||||+ +++|.+++..  ...+++..+..++.||+.||.|||++ ||+||||||+|||+...   +
T Consensus        94 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~  172 (373)
T 1q8y_A           94 HFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE  172 (373)
T ss_dssp             EEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTT
T ss_pred             HhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCc
Confidence            998654    799999999 8899999876  34599999999999999999999998 99999999999999532   2


Q ss_pred             CCCceEEeecccccccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCH------HHHH
Q 043828          220 ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETE------EGIA  292 (586)
Q Consensus       220 ~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~  292 (586)
                      ..+.+||+|||++.....  ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...+.      ....
T Consensus       173 ~~~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~  250 (373)
T 1q8y_A          173 NLIQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI  250 (373)
T ss_dssp             TEEEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred             CcceEEEcccccccccCC--CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence            345899999999987543  2345679999999999874 689999999999999999999999976542      2222


Q ss_pred             HHHHhCccCCCC--------------------------------------CCCCCCCHHHHHHHHHccCCCCCCCCCHHH
Q 043828          293 HAIIRGKIDFER--------------------------------------DPWPKVSKEAKELVKNMLDPNPYNRLTLEE  334 (586)
Q Consensus       293 ~~i~~~~~~~~~--------------------------------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~e  334 (586)
                      ..+.......+.                                      .....++..+.+||.+||+.||.+|||+.|
T Consensus       251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  330 (373)
T 1q8y_A          251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG  330 (373)
T ss_dssp             HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred             HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence            222211000000                                      001124568899999999999999999999


Q ss_pred             HhcCCCccCCCCC
Q 043828          335 VLENPWIKNDNHA  347 (586)
Q Consensus       335 il~hp~~~~~~~~  347 (586)
                      +|+||||+.....
T Consensus       331 ll~hp~f~~~~~~  343 (373)
T 1q8y_A          331 LVNHPWLKDTLGM  343 (373)
T ss_dssp             HHTCGGGTTCTTC
T ss_pred             HhhChhhhcccCc
Confidence            9999999975433

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-43  Score=361.27  Aligned_cols=253  Identities=22%  Similarity=0.307  Sum_probs=211.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEc-----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEI-----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      .++|++++.||+|+||.||+|.+.     .++..||+|++.....  ....+.+.+|+.+++++.+||||+++++++...
T Consensus        44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  121 (344)
T 1rjb_A           44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD--SSEREALMSELKMMTQLGSHENIVNLLGACTLS  121 (344)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC--HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence            478999999999999999999873     3567899999975432  223467899999999997899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhCC-----------------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCC
Q 043828          155 DAIYLVMELCEGGELFDRIVNKG-----------------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPE  211 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~~-----------------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~  211 (586)
                      +.+|+||||+++|+|.+++....                       .+++..+..++.||+.||.|||++||+||||||+
T Consensus       122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~  201 (344)
T 1rjb_A          122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR  201 (344)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGG
T ss_pred             CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChh
Confidence            99999999999999999997643                       2789999999999999999999999999999999


Q ss_pred             ceEeecCCCCCceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCC
Q 043828          212 NFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAE  286 (586)
Q Consensus       212 Nill~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~  286 (586)
                      |||+   +.++.+||+|||++........   .....||+.|+|||++. ..++.++|||||||++|+|++ |..||.+.
T Consensus       202 NIll---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  278 (344)
T 1rjb_A          202 NVLV---THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI  278 (344)
T ss_dssp             GEEE---ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred             hEEE---cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccC
Confidence            9999   5678999999999986543322   23356788999999986 568999999999999999998 99999887


Q ss_pred             CHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCC
Q 043828          287 TEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENP  339 (586)
Q Consensus       287 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp  339 (586)
                      ........+.......+.  ...+++.+.+||.+||..||.+|||+.++++|.
T Consensus       279 ~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l  329 (344)
T 1rjb_A          279 PVDANFYKLIQNGFKMDQ--PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL  329 (344)
T ss_dssp             CCSHHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CcHHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence            655555555544433332  245789999999999999999999999999874

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=6.8e-44  Score=356.34  Aligned_cols=243  Identities=37%  Similarity=0.680  Sum_probs=198.7

Q ss_pred             CCCcccCeeec-ceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe-
Q 043828           76 EGNILDKYTFG-KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED-  153 (586)
Q Consensus        76 ~~~~~~~y~~~-~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~-  153 (586)
                      .+.+.++|.+. +.||+|+||.||+|.+..+++.||+|++...        ..+.+|+.++.++.+||||+++++++.. 
T Consensus        12 ~~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~   83 (299)
T 3m2w_A           12 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENL   83 (299)
T ss_dssp             CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEE
T ss_pred             ccccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhh
Confidence            35677889998 7799999999999999999999999998542        4567899998666699999999999987 


Q ss_pred             ---CCeEEEEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEee
Q 043828          154 ---KDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAID  228 (586)
Q Consensus       154 ---~~~~~iv~E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~D  228 (586)
                         ...+|+||||++||+|.+++....  .+++..++.++.||+.||.|||++||+||||||+||+++.....+.+||+|
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~D  163 (299)
T 3m2w_A           84 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTD  163 (299)
T ss_dssp             ETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred             cCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEec
Confidence               678999999999999999998754  699999999999999999999999999999999999996443478999999


Q ss_pred             cccccccCCCCceecccCCccccchhhhhccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHH----HhCccCCCC
Q 043828          229 FGLSIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAI----IRGKIDFER  304 (586)
Q Consensus       229 fg~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i----~~~~~~~~~  304 (586)
                      ||++.....                    ..++.++|||||||++|+|++|..||...........+    ......++.
T Consensus       164 fg~a~~~~~--------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  223 (299)
T 3m2w_A          164 FGFAKETTG--------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN  223 (299)
T ss_dssp             CTTCEECTT--------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCH
T ss_pred             ccccccccc--------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCc
Confidence            999865421                    34677899999999999999999999776544322111    111222222


Q ss_pred             CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCCC
Q 043828          305 DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH  346 (586)
Q Consensus       305 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~  346 (586)
                      ..+..+++.+.+||.+||+.||.+|||+.|+|+||||+....
T Consensus       224 ~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~  265 (299)
T 3m2w_A          224 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK  265 (299)
T ss_dssp             HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGG
T ss_pred             hhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhccccc
Confidence            223568999999999999999999999999999999986543

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.2e-44  Score=358.46  Aligned_cols=255  Identities=28%  Similarity=0.545  Sum_probs=205.1

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCCh---hcHHHHHHHHHHHHhCC---CCCCeeEEEEEE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEIMRHLP---KHPNIVTYKEAY  151 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~---~~~~~~~~Ei~~l~~l~---~hpnIv~l~~~~  151 (586)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||+|++........   .....+.+|+.+++++.   +||||+++++++
T Consensus        28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~  107 (312)
T 2iwi_A           28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF  107 (312)
T ss_dssp             -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred             hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence            456789999999999999999999999999999999976543221   11234557888888874   699999999999


Q ss_pred             EeCCeEEEEEec-cCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecc
Q 043828          152 EDKDAIYLVMEL-CEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG  230 (586)
Q Consensus       152 ~~~~~~~iv~E~-~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg  230 (586)
                      ...+..++|||| +.+++|.+++.....+++..++.++.||+.||.|||++||+||||||+||+++  ..++.+||+|||
T Consensus       108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~--~~~~~~kl~dfg  185 (312)
T 2iwi_A          108 ETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILID--LRRGCAKLIDFG  185 (312)
T ss_dssp             -----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEE--TTTTEEEECCCS
T ss_pred             ecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEe--CCCCeEEEEEcc
Confidence            999999999999 78999999999888899999999999999999999999999999999999994  256789999999


Q ss_pred             cccccCCCCceecccCCccccchhhhhc-cC-CCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCC
Q 043828          231 LSIFFKPGEQFCEIVGSPYYMAPEVLRR-NY-GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP  308 (586)
Q Consensus       231 ~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~-~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  308 (586)
                      ++...... ......||+.|+|||++.+ .+ +.++|||||||++|+|++|..||....      .+......++    .
T Consensus       186 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~----~  254 (312)
T 2iwi_A          186 SGALLHDE-PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAELHFP----A  254 (312)
T ss_dssp             SCEECCSS-CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHTCCCCC----T
T ss_pred             hhhhcccC-cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------HHhhhccCCc----c
Confidence            99876543 3345679999999999864 33 458999999999999999999996532      2333333332    4


Q ss_pred             CCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          309 KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      .++..+.+||.+||..||.+|||+.++++||||+...
T Consensus       255 ~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          255 HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPA  291 (312)
T ss_dssp             TSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC--
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCch
Confidence            6889999999999999999999999999999998643

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=2.7e-43  Score=348.77  Aligned_cols=250  Identities=23%  Similarity=0.349  Sum_probs=201.3

Q ss_pred             cccCeeecceeccCCceEEEEEEEccC---CcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIET---GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      ..++|++.+.||+|+||.||+|.+..+   +..||+|++....  .....+.+.+|+.+++++ +||||+++++++. ++
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~   88 (281)
T 1mp8_A           13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-EN   88 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC-SS
T ss_pred             ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHHhC-CCCccceEEEEEc-cC
Confidence            346899999999999999999998654   4569999876432  233456789999999999 8999999999984 56


Q ss_pred             eEEEEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      .+|+||||+++++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||++..
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~  165 (281)
T 1mp8_A           89 PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRY  165 (281)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECC------
T ss_pred             ccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEEC---CCCCEEECccccccc
Confidence            7899999999999999998654 699999999999999999999999999999999999994   567899999999987


Q ss_pred             cCCCCc--eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          235 FKPGEQ--FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       235 ~~~~~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      ......  .....+|+.|+|||++. ..++.++|||||||++|+|++ |..||.+.........+..+...   +..+.+
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~---~~~~~~  242 (281)
T 1mp8_A          166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL---PMPPNC  242 (281)
T ss_dssp             -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---CCCTTC
T ss_pred             cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCC---CCCCCC
Confidence            644322  22345778999999986 568899999999999999996 99999988877777777665432   123568


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ++.+.+||.+||..||.+|||+.+++++
T Consensus       243 ~~~l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          243 PPTLYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            9999999999999999999999999874

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=7.2e-43  Score=354.64  Aligned_cols=252  Identities=26%  Similarity=0.386  Sum_probs=215.6

Q ss_pred             cccCeeecceeccCCceEEEEEEEc-------cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEI-------ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAY  151 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~-------~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~  151 (586)
                      ..++|++++.||+|+||.||+|.+.       .++..||+|++....  .......+.+|+.+++++.+||||+++++++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  110 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC  110 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence            3478999999999999999999875       457789999987543  3344577899999999998899999999999


Q ss_pred             EeCCeEEEEEeccCCCChHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEe
Q 043828          152 EDKDAIYLVMELCEGGELFDRIVNKG----------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLF  215 (586)
Q Consensus       152 ~~~~~~~iv~E~~~gg~L~~~l~~~~----------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill  215 (586)
                      ...+.+|+||||+++|+|.+++....                .+++..+..++.||+.||.|||++||+||||||+||++
T Consensus       111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll  190 (334)
T 2pvf_A          111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV  190 (334)
T ss_dssp             CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred             ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEE
Confidence            99999999999999999999997653                38999999999999999999999999999999999999


Q ss_pred             ecCCCCCceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHH
Q 043828          216 ADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEG  290 (586)
Q Consensus       216 ~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~  290 (586)
                         +.++.+||+|||++........   .....+|+.|+|||++. ..++.++|||||||++|+|++ |..||.+.+..+
T Consensus       191 ---~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~  267 (334)
T 2pvf_A          191 ---TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE  267 (334)
T ss_dssp             ---CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH
T ss_pred             ---cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH
Confidence               5678999999999987654332   22345788999999986 468899999999999999999 999999988888


Q ss_pred             HHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          291 IAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       291 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +...+..+....   ....++..+.+||.+||..||.+|||+.+++++
T Consensus       268 ~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          268 LFKLLKEGHRMD---KPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             HHHHHHHTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhcCCCCC---CCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            887777664322   224688999999999999999999999999975

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=1.9e-43  Score=355.37  Aligned_cols=252  Identities=22%  Similarity=0.333  Sum_probs=211.9

Q ss_pred             ccCeeecceeccCCceEEEEEEE-----ccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFE-----IETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~-----~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      .++|++++.||+|+||.||+|.+     ..+++.||+|++....  .....+.+.+|+.+++++.+||||+++++++...
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   99 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGACTIG   99 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch--hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence            46899999999999999999985     3567899999997543  2234577899999999998899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhCC------------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEee
Q 043828          155 DAIYLVMELCEGGELFDRIVNKG------------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA  216 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~~------------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~  216 (586)
                      +..++||||+++|+|.+++....                  .+++..++.++.||+.||.|||++||+||||||+||++ 
T Consensus       100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~-  178 (313)
T 1t46_A          100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL-  178 (313)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE-
T ss_pred             CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEE-
Confidence            99999999999999999997654                  48999999999999999999999999999999999999 


Q ss_pred             cCCCCCceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHH
Q 043828          217 DGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGI  291 (586)
Q Consensus       217 ~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~  291 (586)
                        +.++.+||+|||++........   .....||+.|+|||++. ..++.++|||||||++|+|++ |..||........
T Consensus       179 --~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~  256 (313)
T 1t46_A          179 --THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK  256 (313)
T ss_dssp             --ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred             --cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH
Confidence              4678999999999987654332   22345788999999886 468999999999999999998 9999987665444


Q ss_pred             HHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          292 AHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       292 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ............  ....++..+.+||.+||..||.+|||+.+++++
T Consensus       257 ~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          257 FYKMIKEGFRML--SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             HHHHHHHTCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhccCCCCC--CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            443333332222  224688999999999999999999999999975

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=1.9e-43  Score=351.33  Aligned_cols=247  Identities=19%  Similarity=0.275  Sum_probs=204.4

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCC-------cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETG-------ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYE  152 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~-------~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~  152 (586)
                      .++|++.+.||+|+||+||+|++..++       ..||+|++....   ....+.+.+|+.+++++ +||||+++++++.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~   82 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH---RNYSESFFEAASMMSKL-SHKHLVLNYGVCV   82 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG---GGGHHHHHHHHHHHHTS-CCTTBCCEEEEEC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc---HHHHHHHHHHHHHHHhC-CCCCEeEEEEEEE
Confidence            468999999999999999999988877       479999986543   23457889999999999 8999999999999


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCC-----CCceEE
Q 043828          153 DKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSE-----NSQLKA  226 (586)
Q Consensus       153 ~~~~~~iv~E~~~gg~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~-----~~~vkl  226 (586)
                      +.+..|+||||++|++|.+++..... +++..+..++.||+.||.|||++||+||||||+|||++.+..     .+.+||
T Consensus        83 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl  162 (289)
T 4fvq_A           83 CGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKL  162 (289)
T ss_dssp             CTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred             eCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeee
Confidence            99999999999999999999987654 999999999999999999999999999999999999954211     112999


Q ss_pred             eecccccccCCCCceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCC-CCCCCCCHHHHHHHHHhCccCCC
Q 043828          227 IDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGV-PPFWAETEEGIAHAIIRGKIDFE  303 (586)
Q Consensus       227 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~-~pf~~~~~~~~~~~i~~~~~~~~  303 (586)
                      +|||++......   ....||+.|+|||++.  ..++.++|||||||++|+|++|. +||.......... .......++
T Consensus       163 ~Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~-~~~~~~~~~  238 (289)
T 4fvq_A          163 SDPGISITVLPK---DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQ-FYEDRHQLP  238 (289)
T ss_dssp             CCCCSCTTTSCH---HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH-HHHTTCCCC
T ss_pred             ccCcccccccCc---cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHH-HhhccCCCC
Confidence            999998765322   3356889999999986  45899999999999999999955 5555544444333 333333332


Q ss_pred             CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       304 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                          ...+..+.+||.+||+.||.+|||+.++++|
T Consensus       239 ----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          239 ----APKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             ----CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             ----CCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                2457789999999999999999999999987

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.2e-43  Score=368.57  Aligned_cols=257  Identities=24%  Similarity=0.394  Sum_probs=211.6

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC--e
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD--A  156 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~--~  156 (586)
                      ..++|++.+.||+|+||+||+|++..+|+.||+|++.......  ..+.+.+|+.+++++ +||||+++++++....  .
T Consensus         7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l-~hpnIv~~~~~~~~~~~~~   83 (396)
T 4eut_A            7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR--PVDVQMREFEVLKKL-NHKNIVKLFAIEEETTTRH   83 (396)
T ss_dssp             SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGS--CHHHHHHHHHHHHHC-CCTTBCCEEEEEECTTTCC
T ss_pred             CCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccc--hHHHHHHHHHHHHhc-CCCCCCeEEEeeccCCCCe
Confidence            3468999999999999999999999999999999997654322  356788999999999 8999999999998765  7


Q ss_pred             EEEEEeccCCCChHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEee-cCCCCCceEEeecccc
Q 043828          157 IYLVMELCEGGELFDRIVNKG---HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA-DGSENSQLKAIDFGLS  232 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~-~~~~~~~vkl~Dfg~a  232 (586)
                      +|+|||||+||+|.+++....   .+++..++.++.||+.||.|||++||+||||||+|||+. ..+..+.+||+|||++
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a  163 (396)
T 4eut_A           84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA  163 (396)
T ss_dssp             EEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred             eEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence            899999999999999987543   399999999999999999999999999999999999983 2245667999999999


Q ss_pred             cccCCCCceecccCCccccchhhhh---------ccCCCcchHHHHHHHHHHHhhCCCCCCC----CCHHHHHHHHHhCc
Q 043828          233 IFFKPGEQFCEIVGSPYYMAPEVLR---------RNYGPEIDVWSAGVIIYILLCGVPPFWA----ETEEGIAHAIIRGK  299 (586)
Q Consensus       233 ~~~~~~~~~~~~~gt~~y~aPE~l~---------~~~~~~~DiwslG~il~~ll~g~~pf~~----~~~~~~~~~i~~~~  299 (586)
                      .............||+.|+|||++.         ..++.++|||||||++|+|++|..||..    ....+....+..+.
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~  243 (396)
T 4eut_A          164 RELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK  243 (396)
T ss_dssp             EECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSC
T ss_pred             eEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCC
Confidence            8876665556678999999999985         3577899999999999999999999964    22344555555543


Q ss_pred             cCCC---------------------CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          300 IDFE---------------------RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       300 ~~~~---------------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ....                     ......++..+.+||.+||..||.+|||+++++++
T Consensus       244 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~  303 (396)
T 4eut_A          244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE  303 (396)
T ss_dssp             CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred             CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence            2110                     00011244678899999999999999999998654

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=7.6e-43  Score=352.58  Aligned_cols=252  Identities=20%  Similarity=0.277  Sum_probs=216.0

Q ss_pred             CcccCeeecceeccCCceEEEEEEEc-----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEI-----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYE  152 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~  152 (586)
                      ...++|++.+.||+|+||.||+|.+.     .+++.||+|++....  .......+.+|+.+++.+ +||||+++++++.
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~   98 (322)
T 1p4o_A           22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEF-NCHHVVRLLGVVS   98 (322)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGC-CCTTBCCEEEEEC
T ss_pred             chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhc-CCCCEeeeEEEEc
Confidence            34578999999999999999999876     467889999986543  233345788999999999 8999999999999


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCC
Q 043828          153 DKDAIYLVMELCEGGELFDRIVNK----------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENS  222 (586)
Q Consensus       153 ~~~~~~iv~E~~~gg~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~  222 (586)
                      +.+.+|+||||+++|+|.+++...          ..+++..+..++.||+.||.|||++||+||||||+||++   +.++
T Consensus        99 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli---~~~~  175 (322)
T 1p4o_A           99 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDF  175 (322)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE---CTTC
T ss_pred             cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEE---cCCC
Confidence            999999999999999999998752          457899999999999999999999999999999999999   5678


Q ss_pred             ceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHh
Q 043828          223 QLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIR  297 (586)
Q Consensus       223 ~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~  297 (586)
                      .+||+|||++........   .....||+.|+|||++. ..++.++|||||||++|+|++ |..||...+.......+..
T Consensus       176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  255 (322)
T 1p4o_A          176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME  255 (322)
T ss_dssp             CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHT
T ss_pred             eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHc
Confidence            999999999976543321   12345688999999986 468999999999999999999 8999999888888887777


Q ss_pred             CccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          298 GKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +.....   ...++..+.+||.+||..||.+|||+.++++|
T Consensus       256 ~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          256 GGLLDK---PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             TCCCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCcCCC---CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            654322   24688999999999999999999999999987

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=3.8e-43  Score=355.49  Aligned_cols=249  Identities=21%  Similarity=0.279  Sum_probs=203.5

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEE----EEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETY----ACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~----avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      .++|++.+.||+|+||+||+|++..+++.+    |+|.+....  .......+.+|+.+++++ +||||+++++++....
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~   90 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGICLTST   90 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHC-CBTTBCCEEEEEESSS
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCC
Confidence            358999999999999999999988887765    666654332  223457889999999999 8999999999998754


Q ss_pred             eEEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          156 AIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                       .++|+||+.+|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++..
T Consensus        91 -~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll---~~~~~~kl~Dfg~a~~  166 (327)
T 3poz_A           91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKL  166 (327)
T ss_dssp             -EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---EETTEEEECCTTHHHH
T ss_pred             -eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEE---CCCCCEEEccCcceeE
Confidence             7899999999999999987 4579999999999999999999999999999999999999   4567899999999987


Q ss_pred             cCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCC
Q 043828          235 FKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPK  309 (586)
Q Consensus       235 ~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  309 (586)
                      ......   .....||+.|+|||++. ..++.++|||||||++|+|++ |..||.+.+...+...+..+... +  ..+.
T Consensus       167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~-~--~~~~  243 (327)
T 3poz_A          167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL-P--QPPI  243 (327)
T ss_dssp             HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC-C--CCTT
T ss_pred             ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCC-C--CCcc
Confidence            654332   22345688999999986 468999999999999999999 99999988777766666655422 2  2246


Q ss_pred             CCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          310 VSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ++..+.+++.+||+.||.+|||+.+++++
T Consensus       244 ~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          244 CTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             BCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            78999999999999999999999999976

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=2.1e-43  Score=357.18  Aligned_cols=249  Identities=22%  Similarity=0.323  Sum_probs=207.3

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcE----EEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGET----YACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~----~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      .++|++++.||+|+||+||+|.+..+++.    +|+|++.....  ......+.+|+.+++.+ +||||+++++++. .+
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~   87 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG--RQSFQAVTDHMLAIGSL-DHAHIVRLLGLCP-GS   87 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS--CSCBCSCCHHHHHHHTC-CCTTBCCEEEEEC-BS
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc--HHHHHHHHHHHHHHhcC-CCCCcCeEEEEEc-CC
Confidence            36899999999999999999999888876    66666543321  11224567899999999 8999999999986 46


Q ss_pred             eEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      .+++||||+.+|+|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||+   +..+.+||+|||++..
T Consensus        88 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg~a~~  164 (325)
T 3kex_A           88 SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLL---KSPSQVQVADFGVADL  164 (325)
T ss_dssp             SEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEE---SSSSCEEECSCSGGGG
T ss_pred             ccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEE---CCCCeEEECCCCcccc
Confidence            689999999999999998764 579999999999999999999999999999999999999   5678999999999987


Q ss_pred             cCCCC---ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCC
Q 043828          235 FKPGE---QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPK  309 (586)
Q Consensus       235 ~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  309 (586)
                      .....   ......||+.|+|||++. +.++.++|||||||++|+|++ |..||.+.........+..+......   ..
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~  241 (325)
T 3kex_A          165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQP---QI  241 (325)
T ss_dssp             SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCC---TT
T ss_pred             cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCC---Cc
Confidence            65432   234456888999999987 578999999999999999999 99999988877777777665432222   34


Q ss_pred             CCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          310 VSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ++..+.+||.+||..||.+|||+.++++|
T Consensus       242 ~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          242 CTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             BCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             CcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            67889999999999999999999999987

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=3.6e-43  Score=361.70  Aligned_cols=249  Identities=23%  Similarity=0.348  Sum_probs=203.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEc---cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEI---ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      ..+|++.+.||+|+||.||+|++.   .++..||+|++....  .......+.+|+.+++++ +||||+++++++.....
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~  120 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQF-DHPNIIRLEGVVTKSKP  120 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSS
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCc
Confidence            468999999999999999999876   457789999986542  333456789999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      +|+||||+++|+|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++...
T Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll---~~~~~~kl~Dfg~a~~~  197 (373)
T 2qol_A          121 VMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLGRVL  197 (373)
T ss_dssp             CEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC------
T ss_pred             eEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE---cCCCCEEECcCcccccc
Confidence            999999999999999997653 69999999999999999999999999999999999999   66789999999999876


Q ss_pred             CCCCc----eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCC
Q 043828          236 KPGEQ----FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPK  309 (586)
Q Consensus       236 ~~~~~----~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  309 (586)
                      .....    .....+++.|+|||++. ..++.++|||||||++|+|++ |..||...+.......+..+... +  ....
T Consensus       198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~-~--~~~~  274 (373)
T 2qol_A          198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL-P--PPMD  274 (373)
T ss_dssp             ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEEC-C--CCTT
T ss_pred             ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC-C--CCcc
Confidence            43321    12234577899999986 568999999999999999998 99999999888888777665322 2  2246


Q ss_pred             CCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          310 VSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ++..+.+||.+||+.||.+|||+.++++
T Consensus       275 ~~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          275 CPAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             CBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence            7899999999999999999999999986

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=9e-43  Score=366.10  Aligned_cols=255  Identities=27%  Similarity=0.414  Sum_probs=199.8

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      +.+.|.+.+.||+|+||+||.+ ...+|+.||||++....      .+.+.+|+.+++++.+|||||++++++.+...+|
T Consensus        13 l~~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~~------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~   85 (434)
T 2rio_A           13 LKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDF------CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLY   85 (434)
T ss_dssp             CSSCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGGG------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEE
T ss_pred             hhheeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHHH------HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEE
Confidence            3456777889999999999875 45789999999986542      3567889999988768999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCC-------HHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecC----------CCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYT-------ERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADG----------SEN  221 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~-------~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~----------~~~  221 (586)
                      ||||||. |+|.+++.......       +..++.++.||+.||.|||++||+||||||+|||++..          ...
T Consensus        86 lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~  164 (434)
T 2rio_A           86 IALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAEN  164 (434)
T ss_dssp             EEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCS
T ss_pred             EEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCc
Confidence            9999996 59999997654332       23456799999999999999999999999999999642          245


Q ss_pred             CceEEeecccccccCCCCc-----eecccCCccccchhhhh--------ccCCCcchHHHHHHHHHHHhh-CCCCCCCCC
Q 043828          222 SQLKAIDFGLSIFFKPGEQ-----FCEIVGSPYYMAPEVLR--------RNYGPEIDVWSAGVIIYILLC-GVPPFWAET  287 (586)
Q Consensus       222 ~~vkl~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~l~--------~~~~~~~DiwslG~il~~ll~-g~~pf~~~~  287 (586)
                      ..+||+|||++........     ....+||+.|+|||++.        ..++.++|||||||++|+|++ |..||....
T Consensus       165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~  244 (434)
T 2rio_A          165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY  244 (434)
T ss_dssp             CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred             eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence            6899999999987654321     23457999999999985        357889999999999999999 999997654


Q ss_pred             HHHHHHHHHhCccCCCCCC---CCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          288 EEGIAHAIIRGKIDFERDP---WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       288 ~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      ...  ..+..+...++...   ...++.++.+||.+||+.||.+|||+.++++||||+.
T Consensus       245 ~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          245 SRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             THH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             hhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence            433  34455544443321   1234578999999999999999999999999999974

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=1.1e-42  Score=345.49  Aligned_cols=248  Identities=21%  Similarity=0.353  Sum_probs=215.3

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ...+|++.+.||+|+||.||+|.+..++..||+|++....    ...+.+.+|+.+++++ +||||+++++++.+...+|
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~   85 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFY   85 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS----THHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSEE
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH----HHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCEE
Confidence            3468999999999999999999999999999999986542    2356789999999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          159 LVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +||||++|++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++....
T Consensus        86 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~~l~Dfg~~~~~~  162 (288)
T 3kfa_A           86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMT  162 (288)
T ss_dssp             EEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEE---CGGGCEEECCCCGGGTSC
T ss_pred             EEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEE---cCCCCEEEccCccceecc
Confidence            999999999999999863  458999999999999999999999999999999999999   567899999999998765


Q ss_pred             CCCc--eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCH
Q 043828          237 PGEQ--FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       237 ~~~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      ....  .....+|+.|+|||++. ..++.++|||||||++|+|++ |..||...+.......+..... .  .....+++
T Consensus       163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~  239 (288)
T 3kfa_A          163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR-M--ERPEGCPE  239 (288)
T ss_dssp             SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC-C--CCCTTCCH
T ss_pred             CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCC-C--CCCCCCCH
Confidence            4332  23345788999999986 568999999999999999999 9999988877776666655432 1  22356899


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .+.+||.+||..||.+|||+.++++
T Consensus       240 ~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          240 KVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHhCCChhhCcCHHHHHH
Confidence            9999999999999999999999976

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=4.3e-43  Score=349.81  Aligned_cols=249  Identities=24%  Similarity=0.357  Sum_probs=201.6

Q ss_pred             cccCeeecceeccCCceEEEEEE----EccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe-
Q 043828           79 ILDKYTFGKELGRGEFGITHQCF----EIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED-  153 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~----~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~-  153 (586)
                      ..++|++++.||+|+||+||+|+    +..+++.||+|++...   .....+.+.+|+.+++++ +||||+++++++.. 
T Consensus         8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~   83 (295)
T 3ugc_A            8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSA   83 (295)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC---CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECHH
T ss_pred             CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC---CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecC
Confidence            34689999999999999999998    5678999999998654   233456789999999999 89999999999854 


Q ss_pred             -CCeEEEEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          154 -KDAIYLVMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       154 -~~~~~iv~E~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                       ...+++||||+++|+|.+++.... .+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||+
T Consensus        84 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg~  160 (295)
T 3ugc_A           84 GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGL  160 (295)
T ss_dssp             HHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECCCCS
T ss_pred             CCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEE---cCCCeEEEccCcc
Confidence             356899999999999999998754 49999999999999999999999999999999999999   4567899999999


Q ss_pred             ccccCCCCc----eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHH----------------H
Q 043828          232 SIFFKPGEQ----FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEE----------------G  290 (586)
Q Consensus       232 a~~~~~~~~----~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----------------~  290 (586)
                      +........    .....+++.|+|||++. ..++.++|||||||++|+|++|..||......                .
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (295)
T 3ugc_A          161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH  240 (295)
T ss_dssp             CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred             cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence            987643321    22345778899999986 46899999999999999999999998653221                1


Q ss_pred             HHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          291 IAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       291 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ....+... ...+  ....+++.+.+||.+||+.||.+|||+.++++
T Consensus       241 ~~~~~~~~-~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          241 LIELLKNN-GRLP--RPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHHHHHTT-CCCC--CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHhcc-CcCC--CCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            11222222 2222  23468999999999999999999999999986

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1e-42  Score=341.73  Aligned_cols=247  Identities=25%  Similarity=0.407  Sum_probs=214.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.+.||+|+||.||+|.+. +++.||+|++.....    ..+.+.+|+.+++++ +||||+++++++.+.+.+|+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l   80 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICL   80 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB----CHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSSCEE
T ss_pred             hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC----CHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCeEE
Confidence            368999999999999999999875 678899999976542    236789999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||++......
T Consensus        81 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili---~~~~~~kl~dfg~~~~~~~~  157 (267)
T 3t9t_A           81 VTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDD  157 (267)
T ss_dssp             EECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE---CGGGCEEECCTTGGGGBCCH
T ss_pred             EEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEE---CCCCCEEEcccccccccccc
Confidence            99999999999999765 568999999999999999999999999999999999999   56789999999999865432


Q ss_pred             C--ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          239 E--QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       239 ~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      .  ......|++.|+|||++. ..++.++||||||+++|+|++ |..||...+.......+..+.....   ...++..+
T Consensus       158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~~l  234 (267)
T 3t9t_A          158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK---PRLASTHV  234 (267)
T ss_dssp             HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC---CTTSCHHH
T ss_pred             cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCC---CccCcHHH
Confidence            1  112345778899999987 568899999999999999999 8999999888888887776643222   23578999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .++|.+||+.||.+|||+.+++++
T Consensus       235 ~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          235 YQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHccCChhhCcCHHHHHHH
Confidence            999999999999999999999874

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=3.2e-43  Score=348.57  Aligned_cols=247  Identities=26%  Similarity=0.425  Sum_probs=211.4

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe----
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED----  153 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~----  153 (586)
                      .+..+|++++.||+|+||.||+|.+..+|+.||+|++....       +.+.+|+.+++++ +||||+++++++..    
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~   79 (284)
T 2a19_B            8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKL-DHVNIVHYNGCWDGFDYD   79 (284)
T ss_dssp             HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHC-CCTTBCCEEEEEEEEEEC
T ss_pred             hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhC-CCCCEEEEeeeEeccccC
Confidence            34568999999999999999999999999999999997543       3467899999999 89999999999864    


Q ss_pred             ------------CCeEEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCC
Q 043828          154 ------------KDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS  219 (586)
Q Consensus       154 ------------~~~~~iv~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~  219 (586)
                                  ...+|+||||+++++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||++   +
T Consensus        80 ~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~---~  156 (284)
T 2a19_B           80 PETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL---V  156 (284)
T ss_dssp             ---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---E
T ss_pred             cccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEE---c
Confidence                        45689999999999999999754  579999999999999999999999999999999999999   4


Q ss_pred             CCCceEEeecccccccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhC
Q 043828          220 ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRG  298 (586)
Q Consensus       220 ~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~  298 (586)
                      .++.+||+|||++.............||+.|+|||++.+ .++.++|||||||++|+|++|..||...  ......+...
T Consensus       157 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~~~~  234 (284)
T 2a19_B          157 DTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--SKFFTDLRDG  234 (284)
T ss_dssp             ETTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHHHHHTT
T ss_pred             CCCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--HHHHHHhhcc
Confidence            567899999999988766555556679999999999874 6899999999999999999999988532  2233333333


Q ss_pred             ccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          299 KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      .+      ...++..+.+||.+||..||.+|||+.++++|+|...
T Consensus       235 ~~------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~  273 (284)
T 2a19_B          235 II------SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK  273 (284)
T ss_dssp             CC------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred             cc------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence            22      1357899999999999999999999999999988654

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.5e-43  Score=369.29  Aligned_cols=253  Identities=25%  Similarity=0.378  Sum_probs=198.6

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      .+|.+.+.||+|+||+|+. ....+|+.||||++......      .+.+|+.+|+.+.+|||||++++++.+...+|||
T Consensus        24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~~------~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv   96 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECFS------FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIA   96 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTEE------ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEE
T ss_pred             EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHHH------HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEE
Confidence            3699999999999998764 34678999999999654322      3467999999997899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecC--CCCCceEEeecccccccCC
Q 043828          161 MELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADG--SENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~--~~~~~vkl~Dfg~a~~~~~  237 (586)
                      ||||. |+|.+++.... .+.+..+..++.||+.||.|||++||+||||||+|||+...  +....+||+|||+|.....
T Consensus        97 ~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~  175 (432)
T 3p23_A           97 IELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV  175 (432)
T ss_dssp             EECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred             EECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence            99996 59999987653 45666678999999999999999999999999999999532  2334688999999987653


Q ss_pred             CC----ceecccCCccccchhhhh----ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCC-CCC
Q 043828          238 GE----QFCEIVGSPYYMAPEVLR----RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFER-DPW  307 (586)
Q Consensus       238 ~~----~~~~~~gt~~y~aPE~l~----~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~  307 (586)
                      ..    .....+||+.|+|||++.    ..++.++|||||||++|+|++ |..||...........  ........ .+.
T Consensus       176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~--~~~~~~~~~~~~  253 (432)
T 3p23_A          176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL--LGACSLDCLHPE  253 (432)
T ss_dssp             ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHH--TTCCCCTTSCTT
T ss_pred             CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHH--hccCCccccCcc
Confidence            32    234567999999999985    356789999999999999999 9999976554433222  22222111 112


Q ss_pred             CCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       308 ~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      ...+..+.+||.+||+.||.+|||+.++++||||+.
T Consensus       254 ~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~  289 (432)
T 3p23_A          254 KHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS  289 (432)
T ss_dssp             CHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCC
T ss_pred             ccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccC
Confidence            234566899999999999999999999999999975

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=1.8e-42  Score=344.58  Aligned_cols=249  Identities=23%  Similarity=0.322  Sum_probs=210.5

Q ss_pred             ccCeeecc-eeccCCceEEEEEEE--ccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           80 LDKYTFGK-ELGRGEFGITHQCFE--IETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        80 ~~~y~~~~-~lG~G~~g~V~~~~~--~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      ..+|++.+ .||+|+||.||+|.+  ..+++.||+|++..... .....+.+.+|+.+++.+ +||||+++++++ ..+.
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~-~~~~   91 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQL-DNPYIVRMIGIC-EAES   91 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTC-CCTTBCCEEEEE-ESSS
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc-CHHHHHHHHHHHHHHHhC-CCCCEEEEEEEE-CCCC
Confidence            35899998 999999999999954  56678999999976532 233357789999999999 899999999999 5677


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|+||||+++++|.+++.....+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++....
T Consensus        92 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~~~~~  168 (291)
T 1xbb_A           92 WMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFGLSKALR  168 (291)
T ss_dssp             EEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEECCCTTCEECC
T ss_pred             cEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEe---CCCcEEEccCCcceeec
Confidence            899999999999999999888899999999999999999999999999999999999994   56789999999998765


Q ss_pred             CCCce----ecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          237 PGEQF----CEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       237 ~~~~~----~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      .....    ....+++.|+|||++.+ .++.++|||||||++|+|++ |..||...+.......+..+....   ....+
T Consensus       169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~  245 (291)
T 1xbb_A          169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG---CPAGC  245 (291)
T ss_dssp             TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC---CCTTC
T ss_pred             cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC---CCCCC
Confidence            43322    22346788999999864 67889999999999999999 999999988888777776654321   22468


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +..+.++|.+||+.||.+|||+.++++
T Consensus       246 ~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          246 PREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            999999999999999999999999986

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=1.6e-42  Score=341.01  Aligned_cols=246  Identities=16%  Similarity=0.228  Sum_probs=211.4

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC--Ce
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK--DA  156 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~--~~  156 (586)
                      ..++|++.+.||+|+||.||+|++  +|+.+|+|++..... .....+.+.+|+.+++++ +||||+++++++.+.  ..
T Consensus         8 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~   83 (271)
T 3kmu_A            8 DFKQLNFLTKLNENHSGELWKGRW--QGNDIVVKVLKVRDW-STRKSRDFNEECPRLRIF-SHPNVLPVLGACQSPPAPH   83 (271)
T ss_dssp             CGGGCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECCTTC-CHHHHHHHHHHGGGGCCC-SCTTEECEEEEECTTTSSS
T ss_pred             CHHHhHHHHHhcCCCcceEEEEEE--CCeeEEEEEeccccc-CHHHHHHHHHHHHHHHhc-CCCchhheEEEEccCCCCC
Confidence            457899999999999999999987  488999999976543 233456789999999999 899999999999877  78


Q ss_pred             EEEEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          157 IYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENG--VMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~--ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                      +++||||+++|+|.+++....  .+++..+..++.||+.||.|||+++  |+||||||+||++   +.++.++|+|||++
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~---~~~~~~~l~~~~~~  160 (271)
T 3kmu_A           84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMI---DEDMTARISMADVK  160 (271)
T ss_dssp             CEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEE---CTTSCEEEEGGGSC
T ss_pred             eEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEE---cCCcceeEEeccce
Confidence            999999999999999998755  4899999999999999999999999  9999999999999   56788999998887


Q ss_pred             cccCCCCceecccCCccccchhhhhc-cC---CCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCC
Q 043828          233 IFFKPGEQFCEIVGSPYYMAPEVLRR-NY---GPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP  308 (586)
Q Consensus       233 ~~~~~~~~~~~~~gt~~y~aPE~l~~-~~---~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  308 (586)
                      .....    ....||+.|+|||++.+ .+   +.++|||||||++|+|++|..||...+.......+.........  ..
T Consensus       161 ~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~  234 (271)
T 3kmu_A          161 FSFQS----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTI--PP  234 (271)
T ss_dssp             CTTSC----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCC--CT
T ss_pred             eeecc----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCC--CC
Confidence            65332    24578999999999864 23   33799999999999999999999998888877777665544332  34


Q ss_pred             CCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          309 KVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .+++.+.+||.+||+.||.+|||+.++++
T Consensus       235 ~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          235 GISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            68999999999999999999999999986

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=4e-43  Score=354.50  Aligned_cols=246  Identities=24%  Similarity=0.295  Sum_probs=197.7

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC----e
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD----A  156 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~----~  156 (586)
                      .+|++++.||+|+||+||+|++  .++.||+|++....    .......+|+.+++++ +||||+++++++....    .
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~   96 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQL--LNEYVAVKIFPIQD----KQSWQNEYEVYSLPGM-KHENILQFIGAEKRGTSVDVD   96 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSEE
T ss_pred             hhchhhheecccCceEEEEEEE--CCCEEEEEEeecCc----hHHHHHHHHHHHHhcC-CCCCchhhcceeccCCCCCce
Confidence            5899999999999999999976  48899999986542    2234556789999999 8999999999998743    4


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc----------CceeccCCCCceEeecCCCCCceEE
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN----------GVMHRDLKPENFLFADGSENSQLKA  226 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~----------~ivHrDlkp~Nill~~~~~~~~vkl  226 (586)
                      +|+|||||++|+|.+++... .+++..+..++.|++.||.|||+.          ||+||||||+|||+   +..+.+||
T Consensus        97 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill---~~~~~~kL  172 (322)
T 3soc_A           97 LWLITAFHEKGSLSDFLKAN-VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL---KNNLTACI  172 (322)
T ss_dssp             EEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEE---CTTCCEEE
T ss_pred             EEEEEecCCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEE---CCCCeEEE
Confidence            79999999999999998764 599999999999999999999999          99999999999999   56789999


Q ss_pred             eecccccccCCCCc---eecccCCccccchhhhhc------cCCCcchHHHHHHHHHHHhhCCCCCCCCC----------
Q 043828          227 IDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLRR------NYGPEIDVWSAGVIIYILLCGVPPFWAET----------  287 (586)
Q Consensus       227 ~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~~------~~~~~~DiwslG~il~~ll~g~~pf~~~~----------  287 (586)
                      +|||++........   .....||+.|+|||++.+      .++.++|||||||++|+|++|..||.+..          
T Consensus       173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~  252 (322)
T 3soc_A          173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE  252 (322)
T ss_dssp             CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH
T ss_pred             ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh
Confidence            99999977654322   234679999999999864      45668899999999999999999996532          


Q ss_pred             ------HHHHHHHHHhCccCCCCCC-CC--CCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          288 ------EEGIAHAIIRGKIDFERDP-WP--KVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       288 ------~~~~~~~i~~~~~~~~~~~-~~--~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                            .......+........... +.  ..++.+.+||.+||+.||.+|||+.++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          253 IGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             HCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                  2223333322222111110 11  12345999999999999999999999986

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=4.8e-43  Score=353.00  Aligned_cols=251  Identities=24%  Similarity=0.364  Sum_probs=209.1

Q ss_pred             ccCeeecceeccCCceEEEEEEE-----ccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFE-----IETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~-----~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      .++|++.+.||+|+||.||+|.+     ..+++.||+|++....  .......+.+|+.+++++.+||||+++++++...
T Consensus        26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  103 (316)
T 2xir_A           26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKP  103 (316)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred             hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC
Confidence            46899999999999999999985     3567899999997543  2334467889999999997899999999998765


Q ss_pred             C-eEEEEEeccCCCChHHHHHhCCC----------------CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeec
Q 043828          155 D-AIYLVMELCEGGELFDRIVNKGH----------------YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFAD  217 (586)
Q Consensus       155 ~-~~~iv~E~~~gg~L~~~l~~~~~----------------~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~  217 (586)
                      + .+|+||||+++++|.+++.....                +++..+..++.||+.||.|||++||+||||||+||++  
T Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~--  181 (316)
T 2xir_A          104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL--  181 (316)
T ss_dssp             TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE--
T ss_pred             CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEE--
Confidence            4 59999999999999999987543                8899999999999999999999999999999999999  


Q ss_pred             CCCCCceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHH-HH
Q 043828          218 GSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEE-GI  291 (586)
Q Consensus       218 ~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~-~~  291 (586)
                       +..+.+||+|||++........   .....||+.|+|||++. ..++.++|||||||++|+|++ |..||.+.... ..
T Consensus       182 -~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~  260 (316)
T 2xir_A          182 -SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF  260 (316)
T ss_dssp             -CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHH
T ss_pred             -CCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHH
Confidence             5678999999999986543322   23456789999999986 468999999999999999998 99999876533 33


Q ss_pred             HHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          292 AHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       292 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ...+..+.. ..  ....+++.+.++|.+||+.||.+|||+.++++|
T Consensus       261 ~~~~~~~~~-~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          261 CRRLKEGTR-MR--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             HHHHHHTCC-CC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhccCcc-CC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            344444332 11  123578999999999999999999999999986

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=2.9e-43  Score=361.84  Aligned_cols=255  Identities=15%  Similarity=0.147  Sum_probs=195.9

Q ss_pred             ccCeeecceeccCCceEEEEEEEccC-----CcEEEEEEeeccccCCh--------hcHHHHHHHHHHHHhCCCCCCeeE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIET-----GETYACKKIAKEKLKTE--------IDIDDVRREVEIMRHLPKHPNIVT  146 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~-----~~~~avK~i~~~~~~~~--------~~~~~~~~Ei~~l~~l~~hpnIv~  146 (586)
                      .++|++++.||+|+||.||+|.+..+     ++.||+|++........        ........|+..++.+ +||||++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~~iv~  112 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKL-KYLGVPK  112 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTC-SCCCSCC
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhc-cCCCCCe
Confidence            45899999999999999999988664     58899999875431100        0011233455556666 7999999


Q ss_pred             EEEEEEeC----CeEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCC
Q 043828          147 YKEAYEDK----DAIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSEN  221 (586)
Q Consensus       147 l~~~~~~~----~~~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~  221 (586)
                      +++++...    ..+||||||| |++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++. +..
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~-~~~  190 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY-KNP  190 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEES-SCT
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEec-CCC
Confidence            99998764    5589999999 99999999875 67999999999999999999999999999999999999953 256


Q ss_pred             CceEEeecccccccCCCC--------ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHH
Q 043828          222 SQLKAIDFGLSIFFKPGE--------QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIA  292 (586)
Q Consensus       222 ~~vkl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~  292 (586)
                      +.+||+|||++.......        ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.......
T Consensus       191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~  270 (364)
T 3op5_A          191 DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKY  270 (364)
T ss_dssp             TCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHH
T ss_pred             CeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHH
Confidence            899999999997654321        1133569999999999875 5899999999999999999999999853222111


Q ss_pred             HHHHh-----CccCCC--CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          293 HAIIR-----GKIDFE--RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       293 ~~i~~-----~~~~~~--~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .....     ....+.  ......++..+.+||..||..||.+||++.++++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          271 VRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            11110     000000  0011467899999999999999999999999886

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.2e-42  Score=348.64  Aligned_cols=251  Identities=22%  Similarity=0.305  Sum_probs=207.8

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCC----cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETG----ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~----~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      ...+|++.+.||+|+||.||+|.+..++    ..||+|++....  .......+.+|+.+++.+ +||||+++++++...
T Consensus        42 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~  118 (333)
T 1mqb_A           42 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISKY  118 (333)
T ss_dssp             CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSS
T ss_pred             ChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEecC
Confidence            3468999999999999999999876553    359999986543  233456788999999999 899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          155 DAIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                      +.+|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.
T Consensus       119 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~~~  195 (333)
T 1mqb_A          119 KPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSR  195 (333)
T ss_dssp             SSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCCCC--
T ss_pred             CCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEE---CCCCcEEECCCCcch
Confidence            9999999999999999999764 579999999999999999999999999999999999999   567899999999998


Q ss_pred             ccCCCCc----eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCC
Q 043828          234 FFKPGEQ----FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPW  307 (586)
Q Consensus       234 ~~~~~~~----~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  307 (586)
                      .......    .....+|+.|+|||++. ..++.++|||||||++|+|++ |..||...+...+...+..+.. .+  ..
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~-~~--~~  272 (333)
T 1mqb_A          196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFR-LP--TP  272 (333)
T ss_dssp             ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC-CC--CC
T ss_pred             hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCc-CC--Cc
Confidence            7643221    12235678999999986 468899999999999999998 9999999888888777766532 11  22


Q ss_pred             CCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       308 ~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ..++..+.+||.+||+.||.+|||+.+++++
T Consensus       273 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          273 MDCPSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             ccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            4688999999999999999999999999875

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=2.5e-42  Score=364.50  Aligned_cols=243  Identities=23%  Similarity=0.343  Sum_probs=207.8

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC-eE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD-AI  157 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~-~~  157 (586)
                      ..++|++.+.||+|+||.||+|.+  .|+.||||++....     ..+.+.+|+.+|+++ +||||+++++++.... .+
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~--~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~  262 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGL  262 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEESSCT-----TSHHHHHHHHHHHTC-CCTTBCCEEEEEECTTSCE
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEe--cCCeEEEEEeCCch-----HHHHHHHHHHHHHhc-cCCCEEEEEEEEEcCCCce
Confidence            357899999999999999999976  47899999986543     236789999999999 8999999999987665 79


Q ss_pred             EEEEeccCCCChHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          158 YLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      |||||||++|+|.+++...+.  +++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++...
T Consensus       263 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~  339 (450)
T 1k9a_A          263 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEA  339 (450)
T ss_dssp             EEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTSCEEECCCTTCEEC
T ss_pred             EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE---CCCCCEEEeeCCCcccc
Confidence            999999999999999987543  7999999999999999999999999999999999999   56789999999999864


Q ss_pred             CCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          236 KPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       236 ~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ...  .....+++.|+|||++. ..++.++|||||||++|+|++ |..||...+..++...+..+.. .  .....+++.
T Consensus       340 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~-~--~~p~~~~~~  414 (450)
T 1k9a_A          340 SST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK-M--DAPDGCPPA  414 (450)
T ss_dssp             C--------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCC-C--CCCTTCCHH
T ss_pred             ccc--ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-C--CCCCcCCHH
Confidence            322  22336788999999986 468999999999999999998 9999998877777777766532 2  223468999


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhc
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +.+||.+||+.||.+|||+.++++
T Consensus       415 l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          415 VYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHH
Confidence            999999999999999999999975

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=8.5e-43  Score=353.97  Aligned_cols=252  Identities=21%  Similarity=0.332  Sum_probs=210.4

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCc-----EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGE-----TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      .++|++.+.||+|+||.||+|.+..++.     .||+|++....  .....+.+.+|+.+++.+.+||||+++++++...
T Consensus        45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~  122 (333)
T 2i1m_A           45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGACTHG  122 (333)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC
Confidence            4689999999999999999999876664     79999986543  2334567899999999997899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhC--------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCC
Q 043828          155 DAIYLVMELCEGGELFDRIVNK--------------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSE  220 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~--------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~  220 (586)
                      +.+|+||||+++|+|.+++...              ..+++..+..++.||+.||.|||++||+||||||+|||+   +.
T Consensus       123 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~---~~  199 (333)
T 2i1m_A          123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL---TN  199 (333)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEE---EG
T ss_pred             CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEE---CC
Confidence            9999999999999999998652              357999999999999999999999999999999999999   45


Q ss_pred             CCceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHH
Q 043828          221 NSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAI  295 (586)
Q Consensus       221 ~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i  295 (586)
                      ++.+||+|||++........   .....||+.|+|||++. ..++.++|||||||++|+|++ |..||.+.........+
T Consensus       200 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~  279 (333)
T 2i1m_A          200 GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL  279 (333)
T ss_dssp             GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHH
T ss_pred             CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHH
Confidence            67999999999986543221   22345788999999986 468999999999999999998 99999876654444444


Q ss_pred             HhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          296 IRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .........  ...++..+.+||.+||+.||.+|||+.+++++
T Consensus       280 ~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          280 VKDGYQMAQ--PAFAPKNIYSIMQACWALEPTHRPTFQQICSF  320 (333)
T ss_dssp             HHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhcCCCCCC--CCCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            443333222  24578999999999999999999999999873

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.7e-42  Score=342.64  Aligned_cols=251  Identities=26%  Similarity=0.333  Sum_probs=212.3

Q ss_pred             ccCeeecc-eeccCCceEEEEEEEc--cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           80 LDKYTFGK-ELGRGEFGITHQCFEI--ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        80 ~~~y~~~~-~lG~G~~g~V~~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      .++|.+.+ .||+|+||.||+|.+.  .++..||+|++....  .....+.+.+|+.+++.+ +||||+++++++ ..+.
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~-~~~~   83 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQL-DNPYIVRLIGVC-QAEA   83 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEE-ESSS
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc--chhHHHHHHHHHHHHHhC-CCCCEeEEEEEe-cCCC
Confidence            35788887 9999999999999853  467889999997642  334457789999999999 899999999999 4567


Q ss_pred             EEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      +++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++...
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~Dfg~~~~~  160 (287)
T 1u59_A           84 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL---VNRHYAKISDFGLSKAL  160 (287)
T ss_dssp             EEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---EETTEEEECCCTTCEEC
T ss_pred             cEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEE---cCCCCEEECcccceeee
Confidence            99999999999999998653 569999999999999999999999999999999999999   45679999999999876


Q ss_pred             CCCCce----ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCC
Q 043828          236 KPGEQF----CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPK  309 (586)
Q Consensus       236 ~~~~~~----~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  309 (586)
                      ......    ....||+.|+|||++. ..++.++|||||||++|+|++ |..||...........+..+....   ..+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~---~~~~  237 (287)
T 1u59_A          161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRME---CPPE  237 (287)
T ss_dssp             TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCC---CCTT
T ss_pred             ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCC---CCCC
Confidence            543322    2345688999999986 468899999999999999998 999999888877777776654321   2246


Q ss_pred             CCHHHHHHHHHccCCCCCCCCCHHHHhcCCC
Q 043828          310 VSKEAKELVKNMLDPNPYNRLTLEEVLENPW  340 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps~~eil~hp~  340 (586)
                      +++.+.+||.+||..||.+|||+.++++|.+
T Consensus       238 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          238 CPPELYALMSDCWIYKWEDRPDFLTVEQRMR  268 (287)
T ss_dssp             CCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             cCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            8999999999999999999999999998743

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.3e-42  Score=351.34  Aligned_cols=249  Identities=21%  Similarity=0.280  Sum_probs=203.7

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEE----EEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETY----ACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~----avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      .++|++++.||+|+||.||+|.+..+++.+    |+|.+....  .......+.+|+.+++.+ +||||+++++++....
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~   90 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGICLTST   90 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS--SCCCHHHHHHHHHHHTTC-CBTTBCCCCEEEESSS
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc--CHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEecCC
Confidence            368999999999999999999998888766    555543322  233457889999999999 8999999999998755


Q ss_pred             eEEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          156 AIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                       .++|+||+.+|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+   +..+.+||+|||++..
T Consensus        91 -~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---~~~~~~kL~DfG~a~~  166 (327)
T 3lzb_A           91 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKL  166 (327)
T ss_dssp             -EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---EETTEEEECCTTC---
T ss_pred             -ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEE---cCCCCEEEccCcceeE
Confidence             8899999999999999976 4569999999999999999999999999999999999999   4567899999999987


Q ss_pred             cCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCC
Q 043828          235 FKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPK  309 (586)
Q Consensus       235 ~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  309 (586)
                      ......   .....||+.|+|||++. ..|+.++|||||||++|+|++ |..||.+.........+..+....   ..+.
T Consensus       167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~  243 (327)
T 3lzb_A          167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP---QPPI  243 (327)
T ss_dssp             -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC---CCTT
T ss_pred             ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC---CCcc
Confidence            643322   23345688999999986 468999999999999999999 999999888777777666554322   2246


Q ss_pred             CCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          310 VSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ++..+.+||.+||..||.+|||+.|+++.
T Consensus       244 ~~~~l~~li~~~l~~dp~~Rps~~ell~~  272 (327)
T 3lzb_A          244 CTIDVYMIMRKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             BCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            88999999999999999999999999973

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=3.7e-42  Score=376.72  Aligned_cols=246  Identities=24%  Similarity=0.324  Sum_probs=207.0

Q ss_pred             eeec-ceeccCCceEEEEEEE--ccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           83 YTFG-KELGRGEFGITHQCFE--IETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        83 y~~~-~~lG~G~~g~V~~~~~--~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +.+. +.||+|+||+||+|.+  ..+++.||||++..... .....+.+.+|+.+|++| +|||||++++++.. +.++|
T Consensus       370 ~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l-~hpnIv~l~~~~~~-~~~~l  446 (635)
T 4fl3_A          370 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQL-DNPYIVRMIGICEA-ESWML  446 (635)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG-CGGGHHHHHHHHHHHHHC-CCTTBCCEEEEEES-SSEEE
T ss_pred             ccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC-CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEec-CCEEE
Confidence            4443 4799999999999965  45678899999876532 334467899999999999 89999999999975 56899


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||||++|+|.+++.....+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.......
T Consensus       447 v~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl---~~~~~~kL~DFGla~~~~~~~  523 (635)
T 4fl3_A          447 VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADE  523 (635)
T ss_dssp             EEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECCTTHHHHTTC--
T ss_pred             EEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEE---eCCCCEEEEEcCCccccccCc
Confidence            99999999999999988889999999999999999999999999999999999999   456789999999998765432


Q ss_pred             c----eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          240 Q----FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       240 ~----~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      .    .....||+.|+|||++.. .++.++|||||||++|+|++ |..||.+.+..++...+..+....   ....++.+
T Consensus       524 ~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~---~p~~~~~~  600 (635)
T 4fl3_A          524 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG---CPAGCPRE  600 (635)
T ss_dssp             -----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC---CCTTCCHH
T ss_pred             cccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC---CCCCCCHH
Confidence            1    223456789999999974 78999999999999999998 999999999988888887765322   22468999


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhc
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +.+||.+||+.||.+|||+.++++
T Consensus       601 l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          601 MYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHcCCCHhHCcCHHHHHH
Confidence            999999999999999999999975

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=4.8e-42  Score=343.41  Aligned_cols=248  Identities=26%  Similarity=0.385  Sum_probs=203.0

Q ss_pred             cCeeecceeccCCceEEEEEE----EccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC--
Q 043828           81 DKYTFGKELGRGEFGITHQCF----EIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK--  154 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~----~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~--  154 (586)
                      ..|++++.||+|+||.||+|+    +..+++.||+|++....  .......+.+|+.+++.+ +||||+++++++...  
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~   97 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGG   97 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTC-CCTTBCCEEEEEEC---
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc--cchhHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCC
Confidence            579999999999999999998    56789999999997654  233457889999999999 899999999999876  


Q ss_pred             CeEEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          155 DAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                      ..+++||||+++++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||++.
T Consensus        98 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~~  174 (302)
T 4e5w_A           98 NGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV---ESEHQVKIGDFGLTK  174 (302)
T ss_dssp             CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEEEECCCTTCE
T ss_pred             ceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEE---cCCCCEEECcccccc
Confidence            679999999999999999954 5679999999999999999999999999999999999999   456799999999998


Q ss_pred             ccCCCCc----eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCC--------------CH-HHHHH
Q 043828          234 FFKPGEQ----FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAE--------------TE-EGIAH  293 (586)
Q Consensus       234 ~~~~~~~----~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~--------------~~-~~~~~  293 (586)
                      .......    .....||+.|+|||++. ..++.++|||||||++|+|++|..|+...              .. .....
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (302)
T 4e5w_A          175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVN  254 (302)
T ss_dssp             ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHH
T ss_pred             cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHH
Confidence            7654432    23456888899999986 46888999999999999999999876322              11 12222


Q ss_pred             HHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          294 AIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       294 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .+..+ ...  +..+.+++.+.+||.+||+.||.+|||+.++++
T Consensus       255 ~~~~~-~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          255 TLKEG-KRL--PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHHTT-CCC--CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHhcc-CCC--CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            22222 222  223568999999999999999999999999986

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=1.9e-42  Score=345.21  Aligned_cols=254  Identities=19%  Similarity=0.248  Sum_probs=206.0

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .+.++|++.+.||+|+||.||+|++..+|+.||+|++......     ..+.+|+.+++.+..|++|..+..++......
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (296)
T 3uzp_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN   80 (296)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC-----CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEE
T ss_pred             eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch-----hHHHHHHHHHHHhhcCCCCCccccccCCCCce
Confidence            3457899999999999999999999999999999998765422     35789999999994344455565566788899


Q ss_pred             EEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      ++||||+ +++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+...+..+.+||+|||++....
T Consensus        81 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  159 (296)
T 3uzp_A           81 VMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             EEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence            9999999 8999999974 5579999999999999999999999999999999999999533456789999999998765


Q ss_pred             CCCc--------eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCC---HHHHHHHHHhCccCCCC
Q 043828          237 PGEQ--------FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAET---EEGIAHAIIRGKIDFER  304 (586)
Q Consensus       237 ~~~~--------~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~---~~~~~~~i~~~~~~~~~  304 (586)
                      ....        .....||+.|+|||++.+ .++.++|||||||++|+|++|..||....   .......+.......+.
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  239 (296)
T 3uzp_A          160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI  239 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred             ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch
Confidence            4322        245679999999999874 68899999999999999999999997632   22233333332222221


Q ss_pred             -CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          305 -DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       305 -~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                       .....+++.+.+||.+||+.||.+|||+.++++
T Consensus       240 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence             112467899999999999999999999999986

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=3.3e-43  Score=355.13  Aligned_cols=255  Identities=20%  Similarity=0.303  Sum_probs=206.8

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      ....++|++.+.||+|+||.||+|++ .+|+.||+|++....   ....+.+.+|+.+++.+ +||||+++++++...+.
T Consensus        35 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~  109 (321)
T 2qkw_B           35 EEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPES---SQGIEEFETEIETLSFC-RHPHLVSLIGFCDERNE  109 (321)
T ss_dssp             CCCCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCC---SSHHHHHHHHHHGGGSC-CCTTBCCEEEECCCTTC
T ss_pred             HHHHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEecccC---hHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCe
Confidence            34567999999999999999999985 468999999886543   23357789999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          157 IYLVMELCEGGELFDRIVNKG----HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                      +|+||||+++|+|.+++....    .+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||++
T Consensus       110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~---~~~~~~kl~Dfg~~  186 (321)
T 2qkw_B          110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL---DENFVPKITDFGIS  186 (321)
T ss_dssp             CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEE---CTTCCEEECCCTTC
T ss_pred             EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEE---CCCCCEEEeecccc
Confidence            999999999999999886543    58999999999999999999999999999999999999   67789999999999


Q ss_pred             cccCCC---CceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHH-------HHHHhCccC
Q 043828          233 IFFKPG---EQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIA-------HAIIRGKID  301 (586)
Q Consensus       233 ~~~~~~---~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-------~~i~~~~~~  301 (586)
                      ......   .......||+.|+|||++. ..++.++|||||||++|+|++|..||.........       .....+.+.
T Consensus       187 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (321)
T 2qkw_B          187 KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE  266 (321)
T ss_dssp             EECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCC
T ss_pred             cccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHH
Confidence            764322   1223456899999999985 57899999999999999999999999764432111       111111111


Q ss_pred             C------CCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCC
Q 043828          302 F------ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENP  339 (586)
Q Consensus       302 ~------~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp  339 (586)
                      .      .....+..+..+.+++.+||+.||.+|||+.++++|.
T Consensus       267 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          267 QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             SSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence            0      0111123456789999999999999999999999863

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=6.1e-42  Score=374.07  Aligned_cols=247  Identities=26%  Similarity=0.338  Sum_probs=205.4

Q ss_pred             cCeeecc-eeccCCceEEEEEEEcc--CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           81 DKYTFGK-ELGRGEFGITHQCFEIE--TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        81 ~~y~~~~-~lG~G~~g~V~~~~~~~--~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      +++.+.+ .||+|+||.||+|.+..  ++..||||++....  .....+.+.+|+.+|+++ +|||||++++++.. +.+
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l-~hpniv~l~~~~~~-~~~  410 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-EAL  410 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC--SSTTHHHHHHHHHHHTTC-CCTTBCCEEEEEES-SSE
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhC-CCCCEeeEEEEecc-CCe
Confidence            4566666 89999999999998753  45679999997653  223457899999999999 89999999999976 569


Q ss_pred             EEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      |||||||++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++....
T Consensus       411 ~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl---~~~~~vkL~DFGla~~~~  487 (613)
T 2ozo_A          411 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLL---VNRHYAKISDFGLSKALG  487 (613)
T ss_dssp             EEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECCCSTTTTCC
T ss_pred             EEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEE---cCCCcEEEeeccCccccc
Confidence            9999999999999998754 459999999999999999999999999999999999999   456799999999998764


Q ss_pred             CCCc----eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          237 PGEQ----FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       237 ~~~~----~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      ....    .....+++.|+|||++. +.++.++|||||||++|+|++ |..||.+.+..++...+..+...   ...+.+
T Consensus       488 ~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~---~~p~~~  564 (613)
T 2ozo_A          488 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM---ECPPEC  564 (613)
T ss_dssp             --------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCC---CCCTTC
T ss_pred             CCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC---CCCCcC
Confidence            3321    11234568999999986 578999999999999999998 99999998888888887776432   122468


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ++.+.+||.+||..||.+|||+.++++
T Consensus       565 ~~~l~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          565 PPELYALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             CHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            999999999999999999999999853

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=3.3e-42  Score=342.38  Aligned_cols=250  Identities=24%  Similarity=0.422  Sum_probs=197.6

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++.+.||+|+||+||+|++   ...+|+|++..... .....+.+.+|+.+++++ +||||++++++. ....++
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~~~~---~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~-~~~~~~   95 (289)
T 3og7_A           22 PDGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKT-RHVNILLFMGYS-TAPQLA   95 (289)
T ss_dssp             CTTSCEEEEEEEECSSEEEEEEES---SSEEEEEEESCSSC-CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEE-CSSSCE
T ss_pred             CccceeeeeEecCCCCeEEEEEEE---cCceEEEEEeccCC-CHHHHHHHHHHHHHHHhC-CCCcEEEEEeec-cCCccE
Confidence            346899999999999999999964   34699999865532 344457789999999999 899999999964 556789


Q ss_pred             EEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          159 LVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      +||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.....
T Consensus        96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~---~~~~~~kl~Dfg~~~~~~~  172 (289)
T 3og7_A           96 IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSR  172 (289)
T ss_dssp             EEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---ETTTEEEECCCC-------
T ss_pred             EEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEE---CCCCCEEEccceecccccc
Confidence            99999999999998864 4569999999999999999999999999999999999999   4567999999999976542


Q ss_pred             ---CCceecccCCccccchhhhh----ccCCCcchHHHHHHHHHHHhhCCCCCCCCC-HHHHHHHHHhCccCCCCC-CCC
Q 043828          238 ---GEQFCEIVGSPYYMAPEVLR----RNYGPEIDVWSAGVIIYILLCGVPPFWAET-EEGIAHAIIRGKIDFERD-PWP  308 (586)
Q Consensus       238 ---~~~~~~~~gt~~y~aPE~l~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~~i~~~~~~~~~~-~~~  308 (586)
                         ........||+.|+|||++.    ..++.++|||||||++|+|++|..||.... .......+..+....... ...
T Consensus       173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (289)
T 3og7_A          173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRS  252 (289)
T ss_dssp             -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCT
T ss_pred             ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccc
Confidence               22234467999999999984    357889999999999999999999998754 444555555554433322 234


Q ss_pred             CCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          309 KVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .+++.+.+||.+||+.||.+|||+.++++
T Consensus       253 ~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          253 NCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            68899999999999999999999999986

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=3.3e-42  Score=340.90  Aligned_cols=251  Identities=22%  Similarity=0.288  Sum_probs=208.1

Q ss_pred             CcccCeeecceeccCCceEEEEEEEcc---CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIE---TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      ...++|++.+.||+|+||.||+|++..   ++..||+|++....  .....+.+.+|+.+++.+ +||||+++++++.+ 
T Consensus         9 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-   84 (281)
T 3cc6_A            9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNL-DHPHIVKLIGIIEE-   84 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHH-CCTTBCCEEEEECS-
T ss_pred             ecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhC-CCCCcceEEEEEcC-
Confidence            345789999999999999999998654   33469999987653  233457789999999999 89999999999875 


Q ss_pred             CeEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          155 DAIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                      +..|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        85 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~  161 (281)
T 3cc6_A           85 EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA---SPECVKLGDFGLSR  161 (281)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEE---ETTEEEECCCCGGG
T ss_pred             CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEC---CCCcEEeCccCCCc
Confidence            4568999999999999999764 4599999999999999999999999999999999999994   56789999999998


Q ss_pred             ccCCCCc--eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCC
Q 043828          234 FFKPGEQ--FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPK  309 (586)
Q Consensus       234 ~~~~~~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  309 (586)
                      .......  .....+|+.|+|||++. ..++.++|||||||++|+|++ |..||...........+..+....   ....
T Consensus       162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~  238 (281)
T 3cc6_A          162 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLP---KPDL  238 (281)
T ss_dssp             CC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCC---CCTT
T ss_pred             ccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCC---CCCC
Confidence            7644321  23345788999999986 468999999999999999998 999998777766666666553321   2245


Q ss_pred             CCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          310 VSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +++.+.+||.+||..||.+|||+.+++++
T Consensus       239 ~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          239 CPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence            78999999999999999999999999875

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=2.1e-42  Score=369.20  Aligned_cols=247  Identities=21%  Similarity=0.354  Sum_probs=214.3

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      ..+|++.+.||+|+||.||+|.+..++..||+|++....    ...+.+.+|+.+|+++ +||||+++++++.....+||
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l  293 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYI  293 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS----SCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEE
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc----cchHHHHHHHHHHHhc-CCCCEeeEEEEEecCCcEEE
Confidence            468999999999999999999999999999999986543    2357899999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          160 VMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |||||++|+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.....
T Consensus       294 v~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~  370 (495)
T 1opk_A          294 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLV---GENHLVKVADFGLSRLMTG  370 (495)
T ss_dssp             EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CGGGCEEECCTTCEECCTT
T ss_pred             EEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEE---CCCCcEEEeecccceeccC
Confidence            99999999999999863  458999999999999999999999999999999999999   5678999999999987643


Q ss_pred             CCce--ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          238 GEQF--CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       238 ~~~~--~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ....  ....+++.|+|||++. +.++.++|||||||++|+|++ |..||.+.+...+...+..+. ..  .....++..
T Consensus       371 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~  447 (495)
T 1opk_A          371 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDY-RM--ERPEGCPEK  447 (495)
T ss_dssp             CCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-CC--CCCTTCCHH
T ss_pred             CceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CC--CCCCCCCHH
Confidence            3221  2344678899999986 568999999999999999999 999999888777666665542 22  223468999


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhc
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +.+||.+||+.||.+|||+.++++
T Consensus       448 l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          448 VYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCcChhHCcCHHHHHH
Confidence            999999999999999999999986

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=6.4e-42  Score=361.93  Aligned_cols=246  Identities=21%  Similarity=0.325  Sum_probs=211.7

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++.+.||+|+||.||+|.+. ++..||||++....    ...+.+.+|+.+|+++ +||||+++++++. ...+|
T Consensus       186 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~~iv~l~~~~~-~~~~~  258 (454)
T 1qcf_A          186 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS----MSVEAFLAEANVMKTL-QHDKLVKLHAVVT-KEPIY  258 (454)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS----BCHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCE
T ss_pred             chHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC----ccHHHHHHHHHHHhhC-CCCCEeeEEEEEe-CCccE
Confidence            4568999999999999999999874 46789999997543    2357899999999999 8999999999986 56789


Q ss_pred             EEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          159 LVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      ||||||++|+|.+++...  ..+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||++....
T Consensus       259 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DFG~a~~~~  335 (454)
T 1qcf_A          259 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIE  335 (454)
T ss_dssp             EEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE---CTTCCEEECSTTGGGGBC
T ss_pred             EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEE---CCCCcEEEeeCCCceEcC
Confidence            999999999999999753  368999999999999999999999999999999999999   567899999999998764


Q ss_pred             CCCc--eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCH
Q 043828          237 PGEQ--FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       237 ~~~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      ....  .....+++.|+|||++. +.++.++|||||||++|+|++ |..||.+.+..++...+..+.. .+  ....+++
T Consensus       336 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~-~~--~~~~~~~  412 (454)
T 1qcf_A          336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR-MP--RPENCPE  412 (454)
T ss_dssp             CHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCC-CC--CCTTSCH
T ss_pred             CCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-CC--CCCCCCH
Confidence            3211  12344678899999997 578999999999999999999 9999999998888888776532 22  2246899


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .+.+||.+||..||.+|||++++++
T Consensus       413 ~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          413 ELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHH
Confidence            9999999999999999999999986

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=1.3e-42  Score=345.51  Aligned_cols=252  Identities=22%  Similarity=0.327  Sum_probs=204.6

Q ss_pred             ccCeeecceeccCCceEEEEEEEcc-CCc--EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIE-TGE--TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~-~~~--~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      .++|++.+.||+|+||+||+|.+.. ++.  .||+|++...........+.+.+|+.+++++ +||||+++++++.... 
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~-   94 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLTPP-   94 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSS-
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEccCC-
Confidence            3589999999999999999998643 333  6899998766544445567899999999999 8999999999998765 


Q ss_pred             EEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      .++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++...
T Consensus        95 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili---~~~~~~kl~Dfg~~~~~  171 (291)
T 1u46_A           95 MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL---ATRDLVKIGDFGLMRAL  171 (291)
T ss_dssp             CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---EETTEEEECCCTTCEEC
T ss_pred             ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEE---cCCCCEEEccccccccc
Confidence            89999999999999998764 569999999999999999999999999999999999999   45678999999999876


Q ss_pred             CCCCc----eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCC
Q 043828          236 KPGEQ----FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPK  309 (586)
Q Consensus       236 ~~~~~----~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  309 (586)
                      .....    .....+|+.|+|||++. ..++.++|||||||++|+|++ |..||...+.......+......++.  ...
T Consensus       172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~  249 (291)
T 1u46_A          172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR--PED  249 (291)
T ss_dssp             CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCC--CTT
T ss_pred             cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCC--CcC
Confidence            54332    12346788999999986 457889999999999999999 99999999988888888776554433  246


Q ss_pred             CCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          310 VSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ++..+.++|.+||..||.+|||+.+++++
T Consensus       250 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~  278 (291)
T 1u46_A          250 CPQDIYNVMVQCWAHKPEDRPTFVALRDF  278 (291)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            89999999999999999999999999973

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=3.5e-42  Score=346.30  Aligned_cols=251  Identities=20%  Similarity=0.291  Sum_probs=202.4

Q ss_pred             ccCeeecceeccCCceEEEEEEEcc---CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC-
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIE---TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD-  155 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~-  155 (586)
                      .++|.+++.||+|+||.||+|....   ++..||+|++..... .....+.+.+|+.+++++ +||||+++++++.... 
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~  110 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-SQREIEEFLSEAACMKDF-SHPNVIRLLGVCIEMSS  110 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC-CHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEC---
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc-chhHHHHHHHHHHHHhcC-CCCCeeeeeEEEeeccc
Confidence            4689999999999999999998765   456899999876532 233456789999999999 8999999999998654 


Q ss_pred             ----eEEEEEeccCCCChHHHHHh------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceE
Q 043828          156 ----AIYLVMELCEGGELFDRIVN------KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLK  225 (586)
Q Consensus       156 ----~~~iv~E~~~gg~L~~~l~~------~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vk  225 (586)
                          ..|+||||+++++|.+++..      ...+++..++.++.||+.||.|||++||+||||||+||++   +.++.+|
T Consensus       111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli---~~~~~~k  187 (313)
T 3brb_A          111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCML---RDDMTVC  187 (313)
T ss_dssp             ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEE---CTTSCEE
T ss_pred             cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCcEE
Confidence                35999999999999999843      3569999999999999999999999999999999999999   5678999


Q ss_pred             EeecccccccCCCC---ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCcc
Q 043828          226 AIDFGLSIFFKPGE---QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKI  300 (586)
Q Consensus       226 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~  300 (586)
                      |+|||++.......   ......+++.|+|||++.+ .++.++|||||||++|+|++ |..||...........+..+..
T Consensus       188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~  267 (313)
T 3brb_A          188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHR  267 (313)
T ss_dssp             ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC
T ss_pred             EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCC
Confidence            99999998654332   1233467889999999864 68899999999999999999 9999988887777777666543


Q ss_pred             CCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       301 ~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .   .....++..+.+||.+||..||.+|||+.+++++
T Consensus       268 ~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          268 L---KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             C---CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             C---CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            2   2224688999999999999999999999999875

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=1e-41  Score=337.00  Aligned_cols=246  Identities=22%  Similarity=0.324  Sum_probs=210.3

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++++.||+|+||.||+|.+. ++..||+|++....    ...+.+.+|+.+++.+ +||||+++++++.. +.+|
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~-~~~~   83 (279)
T 1qpc_A           11 PRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS----MSPDAFLAEANLMKQL-QHQRLVRLYAVVTQ-EPIY   83 (279)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS----SCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCE
T ss_pred             CHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCc----ccHHHHHHHHHHHHhC-CCcCcceEEEEEcC-CCcE
Confidence            3468999999999999999999864 56789999986543    2346789999999999 89999999999864 5689


Q ss_pred             EEEeccCCCChHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          159 LVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +||||+++++|.+++....  .+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||++....
T Consensus        84 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~~~~~~  160 (279)
T 1qpc_A           84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIE  160 (279)
T ss_dssp             EEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECS
T ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEE---cCCCCEEECCCccccccc
Confidence            9999999999999886532  69999999999999999999999999999999999999   567899999999998765


Q ss_pred             CCCce--ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCH
Q 043828          237 PGEQF--CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       237 ~~~~~--~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      .....  ....+++.|+|||++. ..++.++|||||||++|+|++ |..||.+.+..+....+..+...   .....++.
T Consensus       161 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~  237 (279)
T 1qpc_A          161 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM---VRPDNCPE  237 (279)
T ss_dssp             SSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTCCH
T ss_pred             CcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCC---CCcccccH
Confidence            43322  2345678999999986 568899999999999999999 99999998888887777665322   12246889


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .+.+||.+||..||.+|||+.++++
T Consensus       238 ~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          238 ELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHhccChhhCCCHHHHHH
Confidence            9999999999999999999999986

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=3.4e-42  Score=348.56  Aligned_cols=248  Identities=24%  Similarity=0.372  Sum_probs=206.5

Q ss_pred             cCeeecceeccCCceEEEEEE----EccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEE--eC
Q 043828           81 DKYTFGKELGRGEFGITHQCF----EIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYE--DK  154 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~----~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~--~~  154 (586)
                      ++|++++.||+|+||.||+|+    +..+++.||+|++....   ....+.+.+|+.+++++ +||||+++++++.  ..
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~   98 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKAL-HSDFIVKYRGVSYGPGR   98 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC---HHHHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSS
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC---HHHHHHHHHHHHHHHhc-CCCceeEEEEEEecCCC
Confidence            589999999999999999998    46788999999986542   33456789999999999 9999999999987  45


Q ss_pred             CeEEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          155 DAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                      ..+|+||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~---~~~~~~kl~Dfg~~~  175 (327)
T 3lxl_A           99 QSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIADFGLAK  175 (327)
T ss_dssp             CEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEEEECCGGGCE
T ss_pred             ceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEE---CCCCCEEEcccccce
Confidence            679999999999999999976 4569999999999999999999999999999999999999   456789999999998


Q ss_pred             ccCCCCc----eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHH---------------HHHH
Q 043828          234 FFKPGEQ----FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEE---------------GIAH  293 (586)
Q Consensus       234 ~~~~~~~----~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---------------~~~~  293 (586)
                      .......    .....||+.|+|||++.+ .++.++|||||||++|+|++|..||......               ....
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (327)
T 3lxl_A          176 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLE  255 (327)
T ss_dssp             ECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHH
T ss_pred             ecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHH
Confidence            7654332    123468888999999864 5788999999999999999999998654332               1222


Q ss_pred             HHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          294 AIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       294 ~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .+..+ ...  ...+.+++.+.+||.+||..||.+|||+.+++++
T Consensus       256 ~~~~~-~~~--~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          256 LLEEG-QRL--PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             HHHTT-CCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             Hhhcc-cCC--CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            22222 222  2235689999999999999999999999999765

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=1e-42  Score=350.88  Aligned_cols=248  Identities=25%  Similarity=0.406  Sum_probs=202.8

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe----CCe
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED----KDA  156 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~----~~~  156 (586)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|++...   .....+.+.+|+.+++.+ +||||+++++++..    ...
T Consensus        29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~  104 (317)
T 2buj_A           29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLF-NHPNILRLVAYCLRERGAKHE  104 (317)
T ss_dssp             EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEEEETTEEE
T ss_pred             eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhc-CCCCeeeEEEEEEeccCCCce
Confidence            5899999999999999999999999999999998653   234457789999999999 89999999999873    357


Q ss_pred             EEEEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          157 IYLVMELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                      +|+||||+++|+|.+++..    ...+++..++.++.||+.||.|||++||+||||||+||++   +.++.+||+|||++
T Consensus       105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~---~~~~~~kl~dfg~~  181 (317)
T 2buj_A          105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL---GDEGQPVLMDLGSM  181 (317)
T ss_dssp             EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCSSC
T ss_pred             eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE---cCCCCEEEEecCcc
Confidence            8999999999999998875    4679999999999999999999999999999999999999   56789999999988


Q ss_pred             cccCCCC----------ceecccCCccccchhhhhc----cCCCcchHHHHHHHHHHHhhCCCCCCCCCH--HHHHHHHH
Q 043828          233 IFFKPGE----------QFCEIVGSPYYMAPEVLRR----NYGPEIDVWSAGVIIYILLCGVPPFWAETE--EGIAHAII  296 (586)
Q Consensus       233 ~~~~~~~----------~~~~~~gt~~y~aPE~l~~----~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~  296 (586)
                      .......          ......||+.|+|||++..    .++.++|||||||++|+|++|..||.....  ...... .
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~-~  260 (317)
T 2buj_A          182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA-V  260 (317)
T ss_dssp             EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHH-H
T ss_pred             hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHH-h
Confidence            7543211          1123467999999999853    368899999999999999999999953111  111222 2


Q ss_pred             hCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          297 RGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .....+  +..+.++..+.+||.+||+.||.+|||+.+++++
T Consensus       261 ~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          261 QNQLSI--PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             HCC--C--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hccCCC--CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            222222  2235689999999999999999999999999986

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=4.4e-43  Score=357.78  Aligned_cols=256  Identities=18%  Similarity=0.223  Sum_probs=198.4

Q ss_pred             ccCeeecceeccCCceEEEEEEEcc---CCcEEEEEEeeccccCC--------hhcHHHHHHHHHHHHhCCCCCCeeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIE---TGETYACKKIAKEKLKT--------EIDIDDVRREVEIMRHLPKHPNIVTYK  148 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~~avK~i~~~~~~~--------~~~~~~~~~Ei~~l~~l~~hpnIv~l~  148 (586)
                      .++|++++.||+|+||.||+|.+..   ++..+|+|++.......        ......+.+|+.+++.+ +||||++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-~h~ni~~~~  114 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-DYLGIPLFY  114 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-SCCCCCCEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-cccCcceee
Confidence            4689999999999999999999987   78899999987653210        01123456788889998 899999999


Q ss_pred             EEEEe----CCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCce
Q 043828          149 EAYED----KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQL  224 (586)
Q Consensus       149 ~~~~~----~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~v  224 (586)
                      +++..    ...+|+||||| +++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.+ ..+.+
T Consensus       115 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~-~~~~~  192 (345)
T 2v62_A          115 GSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYK-NPDQV  192 (345)
T ss_dssp             EEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESS-STTSE
T ss_pred             cccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccC-CCCcE
Confidence            99988    78899999999 99999999877789999999999999999999999999999999999999532 22389


Q ss_pred             EEeecccccccCCCC--------ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCC--CHHHHHH
Q 043828          225 KAIDFGLSIFFKPGE--------QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAE--TEEGIAH  293 (586)
Q Consensus       225 kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~  293 (586)
                      ||+|||++.......        ......||+.|+|||++.+ .++.++|||||||++|+|++|..||...  .......
T Consensus       193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~  272 (345)
T 2v62_A          193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT  272 (345)
T ss_dssp             EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH
T ss_pred             EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHH
Confidence            999999997653221        1134579999999999875 5899999999999999999999999652  3322222


Q ss_pred             HHHhCccCCCC-----CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          294 AIIRGKIDFER-----DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       294 ~i~~~~~~~~~-----~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .........+.     .+...++..+.+||.+||..||.+|||+.++++.
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  322 (345)
T 2v62_A          273 AKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKI  322 (345)
T ss_dssp             HHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred             HHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence            21111111111     0112688999999999999999999999999874

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=8.4e-44  Score=384.29  Aligned_cols=264  Identities=27%  Similarity=0.424  Sum_probs=211.0

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe---
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED---  153 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~---  153 (586)
                      +...++|++.+.||+|+||.||+|.+..+|+.||+|++....  .....+.+.+|+.+++++ +||||+++++++..   
T Consensus        10 g~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~--~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~v~~~~~~   86 (676)
T 3qa8_A           10 TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--SPKNRERWCLEIQIMKKL-NHPNVVSAREVPDGLQK   86 (676)
T ss_dssp             -------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC--CHHHHHHHHHHHHHHHHC-CBTTBCCEEECCTTTCC
T ss_pred             CCCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC--CHHHHHHHHHHHHHHHhC-CCCCCCceeeeeccccc
Confidence            345579999999999999999999999999999999986542  334457789999999999 89999999998765   


Q ss_pred             ---CCeEEEEEeccCCCChHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEe
Q 043828          154 ---KDAIYLVMELCEGGELFDRIVNKG---HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI  227 (586)
Q Consensus       154 ---~~~~~iv~E~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~  227 (586)
                         .+..|+|||||+||+|.+++....   .+++..++.++.|++.||.|||+.||+||||||+||+++.+.....+||+
T Consensus        87 ~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~  166 (676)
T 3qa8_A           87 LAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKII  166 (676)
T ss_dssp             CCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred             ccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEc
Confidence               677899999999999999998644   58999999999999999999999999999999999999754445569999


Q ss_pred             ecccccccCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHH------------
Q 043828          228 DFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHA------------  294 (586)
Q Consensus       228 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~------------  294 (586)
                      |||++.............||+.|+|||++. ..++.++|||||||++|+|++|..||...........            
T Consensus       167 DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~  246 (676)
T 3qa8_A          167 DLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV  246 (676)
T ss_dssp             SCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCS
T ss_pred             ccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhh
Confidence            999998876665556678999999999986 5689999999999999999999999976543321100            


Q ss_pred             --HHhCccCCC------CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          295 --IIRGKIDFE------RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       295 --i~~~~~~~~------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                        ...+...+.      ....+.+++.+.+||.+||..||.+|||+.++++||||+.
T Consensus       247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~  303 (676)
T 3qa8_A          247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQA  303 (676)
T ss_dssp             CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHH
T ss_pred             hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHH
Confidence              001111111      1112235688999999999999999999999999999974

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=2.8e-42  Score=343.99  Aligned_cols=254  Identities=19%  Similarity=0.246  Sum_probs=201.0

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .+.++|++.+.||+|+||.||+|++..+++.||+|++......     ..+.+|+.+++.+.+|++|..+..++......
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYN   80 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C-----CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEE
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc-----hHHHHHHHHHHHhcCCCCCCeeeeecCCCCce
Confidence            3457899999999999999999999999999999987655432     24788999999994444555566666788999


Q ss_pred             EEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      ++||||+ +++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+...+..+.+||+|||++....
T Consensus        81 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~  159 (296)
T 4hgt_A           81 VMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             EEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             EEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence            9999999 9999999874 5679999999999999999999999999999999999999543466789999999998765


Q ss_pred             CCCc--------eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHH---HHHHHHHhCccCCCC
Q 043828          237 PGEQ--------FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEE---GIAHAIIRGKIDFER  304 (586)
Q Consensus       237 ~~~~--------~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~~i~~~~~~~~~  304 (586)
                      ....        .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..   .....+.......+.
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  239 (296)
T 4hgt_A          160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI  239 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred             CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchh
Confidence            4322        235679999999999874 6889999999999999999999999764321   222222222222221


Q ss_pred             -CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          305 -DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       305 -~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                       .....+++.+.+||.+||+.||.+|||+.++++
T Consensus       240 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          240 EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence             112457899999999999999999999999987

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=4.8e-42  Score=343.15  Aligned_cols=247  Identities=23%  Similarity=0.337  Sum_probs=195.8

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHh--CCCCCCeeEEEEEEEe--
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH--LPKHPNIVTYKEAYED--  153 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~--l~~hpnIv~l~~~~~~--  153 (586)
                      .+.++|++.+.||+|+||+||+|.+  +|+.||+|++....      ...+.+|.+++..  + +||||+++++++..  
T Consensus         5 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~l-~h~niv~~~~~~~~~~   75 (301)
T 3q4u_A            5 TVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRD------EKSWFRETELYNTVML-RHENILGFIASDMTSR   75 (301)
T ss_dssp             CCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGG------HHHHHHHHHHHHHTCC-CCTTBCCEEEEEEEEE
T ss_pred             cccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecccc------chhhHHHHHHHHHhhc-cCcCeeeEEEeecccc
Confidence            4567999999999999999999976  78999999986532      3456667777776  6 89999999998654  


Q ss_pred             --CCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH--------HcCceeccCCCCceEeecCCCCCc
Q 043828          154 --KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH--------ENGVMHRDLKPENFLFADGSENSQ  223 (586)
Q Consensus       154 --~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH--------~~~ivHrDlkp~Nill~~~~~~~~  223 (586)
                        ...+|+||||+++|+|.+++.. ..+++..+..++.||+.||.|||        +++|+||||||+|||+   +.++.
T Consensus        76 ~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill---~~~~~  151 (301)
T 3q4u_A           76 HSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV---KKNGQ  151 (301)
T ss_dssp             TTEEEEEEEECCCTTCBHHHHHTT-CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEE---CTTSC
T ss_pred             CCCceeEEehhhccCCCHHHHHhh-cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEE---cCCCC
Confidence              3568999999999999999854 57999999999999999999999        9999999999999999   56789


Q ss_pred             eEEeecccccccCCCCce-----ecccCCccccchhhhhcc-------CCCcchHHHHHHHHHHHhhC----------CC
Q 043828          224 LKAIDFGLSIFFKPGEQF-----CEIVGSPYYMAPEVLRRN-------YGPEIDVWSAGVIIYILLCG----------VP  281 (586)
Q Consensus       224 vkl~Dfg~a~~~~~~~~~-----~~~~gt~~y~aPE~l~~~-------~~~~~DiwslG~il~~ll~g----------~~  281 (586)
                      +||+|||++.........     ....||+.|+|||++.+.       ++.++|||||||++|+|++|          ..
T Consensus       152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~  231 (301)
T 3q4u_A          152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP  231 (301)
T ss_dssp             EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred             EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccc
Confidence            999999999765443322     234799999999998643       44689999999999999999          88


Q ss_pred             CCCCCCH----HHHHHHHHhCccCCCCCC----CCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          282 PFWAETE----EGIAHAIIRGKIDFERDP----WPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       282 pf~~~~~----~~~~~~i~~~~~~~~~~~----~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ||.....    ..............+..+    ....+..+.+||.+||+.||.+|||+.++++
T Consensus       232 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          232 PFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             cccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            9865321    122222222221111111    0124577999999999999999999999986

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=5.1e-42  Score=342.58  Aligned_cols=251  Identities=22%  Similarity=0.318  Sum_probs=206.3

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCC---cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEE-Ee
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETG---ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAY-ED  153 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~---~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~-~~  153 (586)
                      ....+|++.+.||+|+||.||+|.+..++   ..+|+|.+....  .....+.+.+|+.+++++ +||||+++++++ ..
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~   98 (298)
T 3f66_A           22 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRS   98 (298)
T ss_dssp             GGGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC--SHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCS
T ss_pred             ccceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC--CHHHHHHHHHHHHHHHhC-CCCCEeeeeeEEEcC
Confidence            33457999999999999999999865433   358888886532  334457789999999999 899999999985 45


Q ss_pred             CCeEEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          154 KDAIYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       154 ~~~~~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                      ++..|+||||+++|+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||++
T Consensus        99 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~---~~~~~~kl~Dfg~a  175 (298)
T 3f66_A           99 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML---DEKFTVKVADFGLA  175 (298)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECSCGGG
T ss_pred             CCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE---CCCCCEEECccccc
Confidence            6788999999999999999976 4568999999999999999999999999999999999999   67789999999999


Q ss_pred             cccCCCC-----ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCC
Q 043828          233 IFFKPGE-----QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERD  305 (586)
Q Consensus       233 ~~~~~~~-----~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~  305 (586)
                      .......     ......||+.|+|||++. ..++.++|||||||++|+|++ |.+||...........+..+...... 
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  254 (298)
T 3f66_A          176 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP-  254 (298)
T ss_dssp             CCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCC-
T ss_pred             ccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCC-
Confidence            8654322     223456788999999986 468999999999999999999 67777777666666666665543322 


Q ss_pred             CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       306 ~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                        ..++..+.++|.+||..||.+|||+.++++
T Consensus       255 --~~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          255 --EYCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             --TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence              357899999999999999999999999986

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=6.4e-42  Score=338.30  Aligned_cols=242  Identities=23%  Similarity=0.339  Sum_probs=200.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC-CeEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK-DAIY  158 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~-~~~~  158 (586)
                      .++|++.+.||+|+||.||+|.+  +|+.||+|++....     ..+.+.+|+.+++++ +||||+++++++... +.+|
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~   91 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLY   91 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC-------HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CCE
T ss_pred             hhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchh-----HHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCCceE
Confidence            47899999999999999999976  58899999986542     346789999999999 899999999987544 5789


Q ss_pred             EEEeccCCCChHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          159 LVMELCEGGELFDRIVNKGH--YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~--~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +||||+++++|.+++.....  +++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||++....
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~---~~~~~~~l~Dfg~~~~~~  168 (278)
T 1byg_A           92 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEAS  168 (278)
T ss_dssp             EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTSCEEECCCCC-----
T ss_pred             EEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEE---eCCCcEEEeecccccccc
Confidence            99999999999999976543  8999999999999999999999999999999999999   567899999999987654


Q ss_pred             CCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          237 PGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      ..  .....+++.|+|||++. ..++.++|||||||++|+|++ |..||...+.......+..+..   ......+++.+
T Consensus       169 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l  243 (278)
T 1byg_A          169 ST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---MDAPDGCPPAV  243 (278)
T ss_dssp             ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCC---CCCCTTCCHHH
T ss_pred             cc--ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---CCCcccCCHHH
Confidence            32  22346789999999986 468899999999999999998 9999988877766666554422   22235689999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhc
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .++|.+||+.||.+|||+.++++
T Consensus       244 ~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          244 YEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHhcCChhhCCCHHHHHH
Confidence            99999999999999999999986

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=8.4e-42  Score=344.24  Aligned_cols=249  Identities=26%  Similarity=0.362  Sum_probs=203.6

Q ss_pred             cccCe-eecceeccCCceEEEEEEE----ccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe
Q 043828           79 ILDKY-TFGKELGRGEFGITHQCFE----IETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED  153 (586)
Q Consensus        79 ~~~~y-~~~~~lG~G~~g~V~~~~~----~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~  153 (586)
                      +.++| ++++.||+|+||+||+|..    ..+|+.||+|++....  .......+.+|+.+++++ +||||+++++++.+
T Consensus        28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~  104 (318)
T 3lxp_A           28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA--GPQHRSGWKQEIDILRTL-YHEHIIKYKGCCED  104 (318)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEEE
T ss_pred             ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc--ChHHHHHHHHHHHHHHhC-CCcchhhEEEEEec
Confidence            44556 9999999999999988753    4578899999997653  334457789999999999 89999999999987


Q ss_pred             --CCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          154 --KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       154 --~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                        ...+|+||||+++++|.+++... .+++..++.++.||+.||.|||+.||+||||||+||++   +.++.+||+|||+
T Consensus       105 ~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~---~~~~~~kl~Dfg~  180 (318)
T 3lxp_A          105 AGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL---DNDRLVKIGDFGL  180 (318)
T ss_dssp             TTTTEEEEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCGGG
T ss_pred             CCCceEEEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE---cCCCCEEECCccc
Confidence              46899999999999999988664 59999999999999999999999999999999999999   5678999999999


Q ss_pred             ccccCCCCc----eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHH---------------HH
Q 043828          232 SIFFKPGEQ----FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEE---------------GI  291 (586)
Q Consensus       232 a~~~~~~~~----~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---------------~~  291 (586)
                      +........    .....||+.|+|||++.+ .++.++|||||||++|+|++|..||......               ..
T Consensus       181 a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  260 (318)
T 3lxp_A          181 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRL  260 (318)
T ss_dssp             CEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHH
T ss_pred             cccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHH
Confidence            987754432    233568889999999864 6888999999999999999999999654322               11


Q ss_pred             HHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          292 AHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       292 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ...+..+ ...  +....++..+.+||.+||+.||.+|||+.++++
T Consensus       261 ~~~~~~~-~~~--~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          261 TELLERG-ERL--PRPDKCPAEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHHHHTT-CCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHhcc-cCC--CCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            1222222 222  223568999999999999999999999999985

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=3e-42  Score=345.76  Aligned_cols=251  Identities=26%  Similarity=0.351  Sum_probs=204.1

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeecccc-CChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKL-KTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~-~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      .|..++.||+|+||.||+|.+  +++.||+|++..... ......+.+.+|+.+++.+ +||||+++++++.+.+.+|+|
T Consensus        32 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv  108 (307)
T 2nru_A           32 ISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-QHENLVELLGFSSDGDDLCLV  108 (307)
T ss_dssp             TTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEE
T ss_pred             ccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-CCCCeEEEEEEEecCCceEEE
Confidence            466678999999999999975  788999999875432 2233457789999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          161 MELCEGGELFDRIVN---KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |||+++++|.+++..   ...+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++.....
T Consensus       109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili---~~~~~~kl~Dfg~~~~~~~  185 (307)
T 2nru_A          109 YVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLARASEK  185 (307)
T ss_dssp             EECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECCS
T ss_pred             EEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEE---cCCCcEEEeeccccccccc
Confidence            999999999999874   3469999999999999999999999999999999999999   5678999999999986543


Q ss_pred             CCc---eecccCCccccchhhhhccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHH----HHHHHHhCccCC-------C
Q 043828          238 GEQ---FCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEG----IAHAIIRGKIDF-------E  303 (586)
Q Consensus       238 ~~~---~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~----~~~~i~~~~~~~-------~  303 (586)
                      ...   .....||+.|+|||++.+.++.++|||||||++|+|++|..||.......    +...+......+       .
T Consensus       186 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (307)
T 2nru_A          186 FAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM  265 (307)
T ss_dssp             CSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSC
T ss_pred             ccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccc
Confidence            221   23457999999999998889999999999999999999999997644322    222222211100       0


Q ss_pred             CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       304 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .......+..+.++|.+||+.||.+|||+.+++++
T Consensus       266 ~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          266 NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            01112345678999999999999999999999874

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=3.1e-42  Score=352.58  Aligned_cols=246  Identities=16%  Similarity=0.195  Sum_probs=201.8

Q ss_pred             ccCeeecceeccCCceEEEEEEEcc--------CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeE-----
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIE--------TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVT-----  146 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~--------~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~-----  146 (586)
                      .++|++.+.||+|+||.||+|++..        .++.||+|++...        ..+.+|+.+++++ +||||++     
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l-~h~niv~~~~~~  111 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRA-AKPLQVNKWKKL  111 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHH-CCHHHHHHHHHH
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHh-cccchhhhhhhh
Confidence            3689999999999999999999887        4889999998754        2578899999999 8998887     


Q ss_pred             ----------EEEEEEe-CCeEEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCce
Q 043828          147 ----------YKEAYED-KDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENF  213 (586)
Q Consensus       147 ----------l~~~~~~-~~~~~iv~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Ni  213 (586)
                                +++++.. ...+|+||||+ +++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||
T Consensus       112 ~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NI  190 (352)
T 2jii_A          112 YSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENI  190 (352)
T ss_dssp             TTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGE
T ss_pred             ccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHE
Confidence                      6777776 78899999999 99999999876  7899999999999999999999999999999999999


Q ss_pred             EeecCCCCC--ceEEeecccccccCCCC--------ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCC
Q 043828          214 LFADGSENS--QLKAIDFGLSIFFKPGE--------QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPP  282 (586)
Q Consensus       214 ll~~~~~~~--~vkl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~p  282 (586)
                      |++   .++  .+||+|||++.......        ......||+.|+|||++.+ .++.++|||||||++|+|++|..|
T Consensus       191 l~~---~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p  267 (352)
T 2jii_A          191 FVD---PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLP  267 (352)
T ss_dssp             EEE---TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCT
T ss_pred             EEc---CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            994   455  89999999997654321        1234579999999999875 688999999999999999999999


Q ss_pred             CCCCC--HHHHHHHHH---hCccCC--CCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          283 FWAET--EEGIAHAII---RGKIDF--ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       283 f~~~~--~~~~~~~i~---~~~~~~--~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      |....  ...+.....   .....+  ....+..+++.+.+||.+||..||.+|||+.++++.
T Consensus       268 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  330 (352)
T 2jii_A          268 WTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNN  330 (352)
T ss_dssp             TGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred             cccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHH
Confidence            98753  333332222   222211  122234679999999999999999999999999863

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=7.2e-42  Score=347.48  Aligned_cols=247  Identities=27%  Similarity=0.458  Sum_probs=187.6

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEE--------
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYE--------  152 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~--------  152 (586)
                      .+|++.+.||+|+||.||+|.+..+|+.||+|++....   ......+.+|+.+++++.+||||+++++++.        
T Consensus        28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~  104 (337)
T 3ll6_A           28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE---EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT  104 (337)
T ss_dssp             EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS---HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred             ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc---hHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence            48999999999999999999999999999999985542   3345678899999999966999999999994        


Q ss_pred             eCCeEEEEEeccCCCChHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCceEeecCCCCCceEEe
Q 043828          153 DKDAIYLVMELCEGGELFDRIVN---KGHYTERAAAAVGKTILRIVKVCHENG--VMHRDLKPENFLFADGSENSQLKAI  227 (586)
Q Consensus       153 ~~~~~~iv~E~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivHrDlkp~Nill~~~~~~~~vkl~  227 (586)
                      ....+++||||+. |+|.+++..   .+.+++..++.++.||+.||.|||++|  |+||||||+|||+   +.++.+||+
T Consensus       105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~---~~~~~~kl~  180 (337)
T 3ll6_A          105 GQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL---SNQGTIKLC  180 (337)
T ss_dssp             SSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEE---CTTSCEEBC
T ss_pred             CCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEE---CCCCCEEEe
Confidence            3445899999996 689888764   567999999999999999999999999  9999999999999   567899999


Q ss_pred             ecccccccCCCCc-------------eecccCCccccchhhhh----ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHH
Q 043828          228 DFGLSIFFKPGEQ-------------FCEIVGSPYYMAPEVLR----RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEG  290 (586)
Q Consensus       228 Dfg~a~~~~~~~~-------------~~~~~gt~~y~aPE~l~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~  290 (586)
                      |||++........             .....||+.|+|||++.    ..++.++|||||||++|+|++|..||.......
T Consensus       181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~  260 (337)
T 3ll6_A          181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR  260 (337)
T ss_dssp             CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred             cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH
Confidence            9999987643221             11456899999999983    357889999999999999999999997654432


Q ss_pred             HHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCC
Q 043828          291 IAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW  340 (586)
Q Consensus       291 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~  340 (586)
                      .    .......  +.....+..+.+||.+||+.||.+|||+.|+++|.+
T Consensus       261 ~----~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  304 (337)
T 3ll6_A          261 I----VNGKYSI--PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ  304 (337)
T ss_dssp             ---------CCC--CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred             h----hcCcccC--CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            2    2222222  223457788999999999999999999999999844

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.5e-41  Score=337.44  Aligned_cols=249  Identities=21%  Similarity=0.324  Sum_probs=206.3

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCc---EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGE---TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      -.|.+.+.||+|+||+||+|.+..++.   .+|+|++....  .....+.+.+|+.+++.+ +||||+++++++.+.+..
T Consensus        21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~   97 (298)
T 3pls_A           21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT--EMQQVEAFLREGLLMRGL-NHPNVLALIGIMLPPEGL   97 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC--SHHHHHHHHHHHHHHHTC-CCTTBCCCCEEECCSSSC
T ss_pred             eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc--cHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEecCCCC
Confidence            368888999999999999998765554   79999986432  334457788999999999 899999999999876655


Q ss_pred             -EEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          158 -YLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       158 -~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                       ++||||+.+|+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++   +.++.+||+|||++...
T Consensus        98 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili---~~~~~~kl~Dfg~~~~~  174 (298)
T 3pls_A           98 PHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML---DESFTVKVADFGLARDI  174 (298)
T ss_dssp             CEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECCTTSSCTT
T ss_pred             cEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---cCCCcEEeCcCCCcccc
Confidence             999999999999999976 4568999999999999999999999999999999999999   56789999999999765


Q ss_pred             CCC-----CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCC
Q 043828          236 KPG-----EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWP  308 (586)
Q Consensus       236 ~~~-----~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  308 (586)
                      ...     .......+|+.|+|||.+.+ .++.++|||||||++|+|++ |.+||...+.......+.......   ...
T Consensus       175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~  251 (298)
T 3pls_A          175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLP---QPE  251 (298)
T ss_dssp             TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCC---CCT
T ss_pred             cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCC---CCc
Confidence            332     22234567899999999974 68899999999999999999 455566666666666655554322   224


Q ss_pred             CCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          309 KVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .++..+.+||.+||+.||.+|||+.++++.
T Consensus       252 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  281 (298)
T 3pls_A          252 YCPDSLYQVMQQCWEADPAVRPTFRVLVGE  281 (298)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cchHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            678999999999999999999999999873

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=1.7e-41  Score=358.93  Aligned_cols=254  Identities=20%  Similarity=0.247  Sum_probs=209.9

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .+.++|++++.||+|+||.||+|++..+++.||||++......     ..+.+|+.+++.|..|++|+.+..++......
T Consensus         4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~   78 (483)
T 3sv0_A            4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH-----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYN   78 (483)
T ss_dssp             EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS-----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEE
T ss_pred             CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc-----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEE
Confidence            3557999999999999999999999999999999988755432     24788999999996668888888888889999


Q ss_pred             EEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|||||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+..++..+.+||+|||++....
T Consensus        79 ~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~  157 (483)
T 3sv0_A           79 VLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR  157 (483)
T ss_dssp             EEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             EEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence            9999999 9999999975 5679999999999999999999999999999999999999544467899999999998765


Q ss_pred             CCCc--------eecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCC---HHHHHHHHHhCccCCCC
Q 043828          237 PGEQ--------FCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAET---EEGIAHAIIRGKIDFER  304 (586)
Q Consensus       237 ~~~~--------~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~---~~~~~~~i~~~~~~~~~  304 (586)
                      ....        .....||+.|+|||++.+ .++.++|||||||++|+|++|..||.+..   .......+.........
T Consensus       158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~  237 (483)
T 3sv0_A          158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI  237 (483)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH
T ss_pred             CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH
Confidence            4322        125679999999999874 68999999999999999999999997643   33333333332221111


Q ss_pred             -CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          305 -DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       305 -~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                       .....++.++.+||.+||..||.+||++.+|++
T Consensus       238 ~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          238 EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence             111357899999999999999999999998875

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=1.3e-41  Score=359.26  Aligned_cols=252  Identities=21%  Similarity=0.289  Sum_probs=209.1

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++.+.||+|+||.||+|.+.. +..||+|++.....    ..+.+.+|+.+|+++ +||||+++++++.. +.+|
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~-~~~~  254 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIY  254 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCE
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCC----CHHHHHHHHHHHHhC-CCCCEeeEEEEEcC-CceE
Confidence            34689999999999999999998754 46799999875432    346789999999999 89999999999876 6789


Q ss_pred             EEEeccCCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          159 LVMELCEGGELFDRIVN--KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      ||||||++|+|.+++..  ...+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++....
T Consensus       255 iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill---~~~~~~kl~DfG~a~~~~  331 (452)
T 1fmk_A          255 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIE  331 (452)
T ss_dssp             EEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCCTTC---
T ss_pred             EEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEE---CCCCCEEECCCccceecC
Confidence            99999999999999974  3569999999999999999999999999999999999999   567899999999998764


Q ss_pred             CCC--ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCH
Q 043828          237 PGE--QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       237 ~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      ...  ......+++.|+|||++. +.++.++|||||||++|+|++ |..||.+....++...+..+.. .+  ..+.+++
T Consensus       332 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~-~~--~~~~~~~  408 (452)
T 1fmk_A          332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-MP--CPPECPE  408 (452)
T ss_dssp             -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC-CC--CCTTSCH
T ss_pred             CCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-CC--CCCCCCH
Confidence            332  122345678999999986 568999999999999999999 9999999988888887766532 22  2246899


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhcC--CCccC
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLEN--PWIKN  343 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~h--p~~~~  343 (586)
                      .+.+||.+||..||.+|||++++++.  .++..
T Consensus       409 ~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          409 SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence            99999999999999999999999873  55543

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.7e-42  Score=351.86  Aligned_cols=249  Identities=22%  Similarity=0.321  Sum_probs=198.9

Q ss_pred             cCeeecceeccCCceEEEEEEEccCC---cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEE-eCCe
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETG---ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYE-DKDA  156 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~---~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~-~~~~  156 (586)
                      ..|++.+.||+|+||+||+|.+..++   ..+|+|.+....  .....+.+.+|+.+++++ +||||+++++++. .++.
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~  165 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT--DIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGS  165 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS--CSHHHHHHHHHHTTSTTC-CCTTBCCCCEEECCCSSC
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC--CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCCC
Confidence            46899999999999999999876443   358888886432  334467889999999999 8999999999864 4568


Q ss_pred             EEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      .|+||||+++|+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++...
T Consensus       166 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll---~~~~~~kL~DFG~a~~~  242 (373)
T 3c1x_A          166 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDM  242 (373)
T ss_dssp             CEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC------
T ss_pred             eEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEE---CCCCCEEEeeccccccc
Confidence            89999999999999999764 458899999999999999999999999999999999999   56789999999999865


Q ss_pred             CCCC-----ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCC
Q 043828          236 KPGE-----QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWP  308 (586)
Q Consensus       236 ~~~~-----~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  308 (586)
                      ....     ......+|+.|+|||++. ..++.++|||||||++|+|++ |.+||...+..+....+..+.....   ..
T Consensus       243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~---p~  319 (373)
T 3c1x_A          243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ---PE  319 (373)
T ss_dssp             ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCC---CT
T ss_pred             cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCC---CC
Confidence            4322     123346788999999986 468999999999999999999 7888877766666666666543222   24


Q ss_pred             CCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          309 KVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .++..+.++|.+||..||.+|||+.+++++
T Consensus       320 ~~~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          320 YCPDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            678999999999999999999999999975

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=5.5e-42  Score=346.95  Aligned_cols=255  Identities=19%  Similarity=0.250  Sum_probs=202.6

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++.+.||+|+||.||+|.+ .+|+.||+|++........  ...+.+|+.+++.+ +||||+++++++......+
T Consensus        28 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~  103 (326)
T 3uim_A           28 ASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGG--ELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERL  103 (326)
T ss_dssp             TTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-----C--CCHHHHHHHGGGTC-CCTTBCCCCEEECCSSCCE
T ss_pred             HhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCchH--HHHHHHHHHHHHhc-cCCCccceEEEEecCCceE
Confidence            346899999999999999999974 4689999999976543222  23688999999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          159 LVMELCEGGELFDRIVNKG----HYTERAAAAVGKTILRIVKVCHEN---GVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                      +||||+++|+|.+++....    .+++..+..++.|++.||.|||++   ||+||||||+|||+   +.++.+||+|||+
T Consensus       104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~---~~~~~~kl~Dfg~  180 (326)
T 3uim_A          104 LVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL---DEEFEAVVGDFGL  180 (326)
T ss_dssp             EEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE---CTTCCEEECCCSS
T ss_pred             EEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE---CCCCCEEeccCcc
Confidence            9999999999999997643    489999999999999999999999   99999999999999   5678999999999


Q ss_pred             ccccCCC--CceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCC----HHHHHHHHHhCccCC--
Q 043828          232 SIFFKPG--EQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAET----EEGIAHAIIRGKIDF--  302 (586)
Q Consensus       232 a~~~~~~--~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~----~~~~~~~i~~~~~~~--  302 (586)
                      +......  .......||+.|+|||++. ..++.++|||||||++|+|++|..||....    ...............  
T Consensus       181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  260 (326)
T 3uim_A          181 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK  260 (326)
T ss_dssp             CEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCC
T ss_pred             ccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchh
Confidence            9876433  2234456999999999985 568999999999999999999999995210    000011111111100  


Q ss_pred             ---------CCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCC
Q 043828          303 ---------ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPW  340 (586)
Q Consensus       303 ---------~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~  340 (586)
                               .....+..+..+.+|+.+||+.||.+|||+.++++|-+
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          261 LEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             STTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             hhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence                     00011123467999999999999999999999999854

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=5.6e-41  Score=336.45  Aligned_cols=241  Identities=28%  Similarity=0.412  Sum_probs=194.5

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.+.||+|+||+||+|.+  .++.||+|++...     ...+.+.+|+.+++++ +||||+++++++.  +..|+
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~--~~~~l   76 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESE-----SERKAFIVELRQLSRV-NHPNIVKLYGACL--NPVCL   76 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSST-----THHHHHHHHHHHHHHC-CCTTBCCEEEBCT--TTTEE
T ss_pred             HhHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecCh-----hHHHHHHHHHHHHhcC-CCCCcCeEEEEEc--CCcEE
Confidence            36899999999999999999976  5788999998533     2346789999999999 8999999999876  34789


Q ss_pred             EEeccCCCChHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCceEeecCCCCC-ceEEeecccc
Q 043828          160 VMELCEGGELFDRIVNKG---HYTERAAAAVGKTILRIVKVCHE---NGVMHRDLKPENFLFADGSENS-QLKAIDFGLS  232 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~---~~ivHrDlkp~Nill~~~~~~~-~vkl~Dfg~a  232 (586)
                      ||||++||+|.+++....   .+++..+..++.|++.||.|||+   +||+||||||+||+++   .++ .+||+|||++
T Consensus        77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~---~~~~~~kl~Dfg~~  153 (307)
T 2eva_A           77 VMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV---AGGTVLKICDFGTA  153 (307)
T ss_dssp             EEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEE---TTTTEEEECCCCC-
T ss_pred             EEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEe---CCCCEEEEcccccc
Confidence            999999999999998654   37899999999999999999999   8999999999999995   344 4899999999


Q ss_pred             cccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCC--HHHHHHHHHhCccCCCCCCCCC
Q 043828          233 IFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAET--EEGIAHAIIRGKIDFERDPWPK  309 (586)
Q Consensus       233 ~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~  309 (586)
                      ......  .....||+.|+|||++.+ .++.++|||||||++|+|++|..||....  .......+..+..   ......
T Consensus       154 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~  228 (307)
T 2eva_A          154 CDIQTH--MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR---PPLIKN  228 (307)
T ss_dssp             -------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCC---CCCBTT
T ss_pred             cccccc--cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCC---CCcccc
Confidence            765432  234569999999999874 68999999999999999999999997543  3333333333322   122356


Q ss_pred             CCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          310 VSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ++..+.+||.+||+.||.+|||+.+++++
T Consensus       229 ~~~~l~~li~~~l~~dp~~Rps~~ell~~  257 (307)
T 2eva_A          229 LPKPIESLMTRCWSKDPSQRPSMEEIVKI  257 (307)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            89999999999999999999999999974

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=2.1e-41  Score=348.18  Aligned_cols=245  Identities=19%  Similarity=0.247  Sum_probs=195.8

Q ss_pred             ccCeeecceeccCCceEEEEE-----EEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCC--CCCeeEEEEEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQC-----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK--HPNIVTYKEAYE  152 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~-----~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~--hpnIv~l~~~~~  152 (586)
                      .++|.+.+.||+|+||+||+|     .+..+++.||+|++...      ....+..|+.+++.+..  |+||+++++++.
T Consensus        64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~  137 (365)
T 3e7e_A           64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA------NPWEFYIGTQLMERLKPSMQHMFMKFYSAHL  137 (365)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred             CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC------ChhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence            467999999999999999999     46778999999998643      23567888999988832  899999999999


Q ss_pred             eCCeEEEEEeccCCCChHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeec--------CC
Q 043828          153 DKDAIYLVMELCEGGELFDRIVN-----KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFAD--------GS  219 (586)
Q Consensus       153 ~~~~~~iv~E~~~gg~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~--------~~  219 (586)
                      ..+..|||||||+||+|.+++..     ...+++..+..++.||+.||.|||++||+||||||+|||++.        ..
T Consensus       138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~  217 (365)
T 3e7e_A          138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDD  217 (365)
T ss_dssp             CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC-----
T ss_pred             cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcccccc
Confidence            99999999999999999999974     456999999999999999999999999999999999999953        12


Q ss_pred             CCCceEEeecccccccC---CCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHH
Q 043828          220 ENSQLKAIDFGLSIFFK---PGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAI  295 (586)
Q Consensus       220 ~~~~vkl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i  295 (586)
                      ..+.+||+|||+|....   ........+||+.|+|||++.+ .|+.++|||||||++|+|++|..||.......     
T Consensus       218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-----  292 (365)
T 3e7e_A          218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-----  292 (365)
T ss_dssp             -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-----
T ss_pred             ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-----
Confidence            27899999999996543   3334456789999999999974 58999999999999999999999996543210     


Q ss_pred             HhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          296 IRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ......+..   ...+..+.+++.+||+.+|.+|++..+.+.+
T Consensus       293 ~~~~~~~~~---~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~  332 (365)
T 3e7e_A          293 CKPEGLFRR---LPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQ  332 (365)
T ss_dssp             EEECSCCTT---CSSHHHHHHHHHHHHCCCCTTCCCCHHHHHH
T ss_pred             eeechhccc---cCcHHHHHHHHHHHcCCCCCCcchHHHHHHH
Confidence            000001111   1246788999999999999999655444443

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=2.6e-41  Score=343.45  Aligned_cols=255  Identities=22%  Similarity=0.324  Sum_probs=191.9

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHH--HHhCCCCCCeeEEEEEEEe---
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI--MRHLPKHPNIVTYKEAYED---  153 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~--l~~l~~hpnIv~l~~~~~~---  153 (586)
                      ..++|++++.||+|+||.||+|+.  +++.||+|++....      ...+..|..+  +..+ +||||+++++.+..   
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~-~h~~i~~~~~~~~~~~~   81 (336)
T 3g2f_A           11 DLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN------RQNFINEKNIYRVPLM-EHDNIARFIVGDERVTA   81 (336)
T ss_dssp             CTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG------HHHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECT
T ss_pred             ChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc------hhhHHHHHHHHHHHhc-cCcchhhheeccccccc
Confidence            457999999999999999999965  78999999996543      2334444444  4446 89999999986643   


Q ss_pred             --CCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc---------CceeccCCCCceEeecCCCCC
Q 043828          154 --KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN---------GVMHRDLKPENFLFADGSENS  222 (586)
Q Consensus       154 --~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---------~ivHrDlkp~Nill~~~~~~~  222 (586)
                        ...+|+|||||++|+|.+++... ..++..+..++.||+.||.|||+.         ||+||||||+|||+   +..+
T Consensus        82 ~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill---~~~~  157 (336)
T 3g2f_A           82 DGRMEYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV---KNDG  157 (336)
T ss_dssp             TSCEEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEE---CTTS
T ss_pred             CCCceEEEEEecCCCCcHHHHHhhc-ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEE---cCCC
Confidence              23689999999999999998765 458999999999999999999999         99999999999999   5678


Q ss_pred             ceEEeecccccccCCCC---------ceecccCCccccchhhhhc--------cCCCcchHHHHHHHHHHHhhCCCCCCC
Q 043828          223 QLKAIDFGLSIFFKPGE---------QFCEIVGSPYYMAPEVLRR--------NYGPEIDVWSAGVIIYILLCGVPPFWA  285 (586)
Q Consensus       223 ~vkl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~l~~--------~~~~~~DiwslG~il~~ll~g~~pf~~  285 (586)
                      .+||+|||++.......         ......||+.|+|||++.+        .++.++|||||||++|+|++|..||..
T Consensus       158 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~  237 (336)
T 3g2f_A          158 TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP  237 (336)
T ss_dssp             CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred             cEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence            99999999998654321         1234579999999999864        456789999999999999999777643


Q ss_pred             CC------------------HHHHHHHHHhCccCCCC-CCC---CCCCHHHHHHHHHccCCCCCCCCCHHHHh------c
Q 043828          286 ET------------------EEGIAHAIIRGKIDFER-DPW---PKVSKEAKELVKNMLDPNPYNRLTLEEVL------E  337 (586)
Q Consensus       286 ~~------------------~~~~~~~i~~~~~~~~~-~~~---~~~~~~~~~li~~~L~~dp~~Rps~~eil------~  337 (586)
                      ..                  .......+......... ..+   ..+++.+.+||.+||..||.+|||+.|++      -
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll  317 (336)
T 3g2f_A          238 GESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM  317 (336)
T ss_dssp             TSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence            21                  11111111111111111 111   12445799999999999999999999994      5


Q ss_pred             CCCccCCCC
Q 043828          338 NPWIKNDNH  346 (586)
Q Consensus       338 hp~~~~~~~  346 (586)
                      ++|-++...
T Consensus       318 ~~~~~~~~~  326 (336)
T 3g2f_A          318 MIWERNKSV  326 (336)
T ss_dssp             HCCCC----
T ss_pred             HHHHhcccC
Confidence            688876543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=2.3e-42  Score=351.14  Aligned_cols=251  Identities=17%  Similarity=0.225  Sum_probs=198.7

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccC-----ChhcHHHHHHHHHHHHhCC--------CCCCeeE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK-----TEIDIDDVRREVEIMRHLP--------KHPNIVT  146 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~-----~~~~~~~~~~Ei~~l~~l~--------~hpnIv~  146 (586)
                      .++|++++.||+|+||+||+|++  +|+.||+|++......     .....+.+.+|+.+++.+.        .||||++
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            46899999999999999999987  7899999999876432     2334578899999999984        4888888


Q ss_pred             EEEEEE------------------------------eCCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHH
Q 043828          147 YKEAYE------------------------------DKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK  196 (586)
Q Consensus       147 l~~~~~------------------------------~~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~  196 (586)
                      +.+++.                              ....+|||||||++|++.+.+.. ..+++..++.++.||+.||.
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~  175 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSILHQLTASLA  175 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHHHHHHHHHH
Confidence            888753                              26889999999999987776644 56899999999999999999


Q ss_pred             HHH-HcCceeccCCCCceEeecCC-----------------CCCceEEeecccccccCCCCceecccCCccccchhhhhc
Q 043828          197 VCH-ENGVMHRDLKPENFLFADGS-----------------ENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR  258 (586)
Q Consensus       197 ~lH-~~~ivHrDlkp~Nill~~~~-----------------~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~  258 (586)
                      ||| ++||+||||||+|||++...                 ....+||+|||+|+.....    ..+||+.|+|||++.+
T Consensus       176 ~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~----~~~gt~~y~aPE~~~g  251 (336)
T 2vuw_A          176 VAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG----IVVFCDVSMDEDLFTG  251 (336)
T ss_dssp             HHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT----EEECCCCTTCSGGGCC
T ss_pred             HHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC----cEEEeecccChhhhcC
Confidence            999 99999999999999996432                 1238999999999876533    3479999999999987


Q ss_pred             cCCCcchHHHHHHH-HHHHhhCCCCCCCCCH-HHHHHHHHhCc-cCC--CCCCCCCCCHHHHHHHHHccCCCCCCCCCHH
Q 043828          259 NYGPEIDVWSAGVI-IYILLCGVPPFWAETE-EGIAHAIIRGK-IDF--ERDPWPKVSKEAKELVKNMLDPNPYNRLTLE  333 (586)
Q Consensus       259 ~~~~~~DiwslG~i-l~~ll~g~~pf~~~~~-~~~~~~i~~~~-~~~--~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~  333 (586)
                      ..+.++||||+|++ .+++++|..||..... ......+.... ...  ....++.+++++++||.+||+.|     |+.
T Consensus       252 ~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~  326 (336)
T 2vuw_A          252 DGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SAT  326 (336)
T ss_dssp             CSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHH
T ss_pred             CCccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHH
Confidence            67889999998777 7789999999943211 12223333221 111  11113357889999999999976     999


Q ss_pred             HHh-cCCCcc
Q 043828          334 EVL-ENPWIK  342 (586)
Q Consensus       334 eil-~hp~~~  342 (586)
                      |+| +||||+
T Consensus       327 e~l~~Hp~f~  336 (336)
T 2vuw_A          327 DLLCQHSLFK  336 (336)
T ss_dssp             HHHHHCGGGC
T ss_pred             HHHhcCCCcC
Confidence            999 999995

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=6.3e-41  Score=360.98  Aligned_cols=250  Identities=21%  Similarity=0.292  Sum_probs=212.3

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.+.||+|+||.||+|.+.. +..||||++.....    ..+.+.+|+.+|++| +||||+++++++.. ..+||
T Consensus       266 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l-~hpniv~~~~~~~~-~~~~l  338 (535)
T 2h8h_A          266 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYI  338 (535)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEE
T ss_pred             hhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCC----CHHHHHHHHHHHHhC-CCCCEeeEEEEEee-ccceE
Confidence            4679999999999999999998754 46799999875432    346789999999999 89999999999876 67899


Q ss_pred             EEeccCCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          160 VMELCEGGELFDRIVN--KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |||||++|+|.+++..  ...+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||++.....
T Consensus       339 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll---~~~~~~kl~DFG~a~~~~~  415 (535)
T 2h8h_A          339 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIED  415 (535)
T ss_dssp             EECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCTTSTTTCCC
T ss_pred             eeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE---cCCCcEEEcccccceecCC
Confidence            9999999999999974  3569999999999999999999999999999999999999   5678999999999987543


Q ss_pred             CCc--eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          238 GEQ--FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       238 ~~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ...  .....++..|+|||++. +.++.++|||||||++|+|++ |..||.+....++...+..+.. .+  ....++..
T Consensus       416 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~-~~--~~~~~~~~  492 (535)
T 2h8h_A          416 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-MP--CPPECPES  492 (535)
T ss_dssp             HHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCC-CC--CCTTCCHH
T ss_pred             CceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-CC--CCCCCCHH
Confidence            211  12345678899999986 568999999999999999999 9999999888888887766532 22  22468999


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhcC--CCcc
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLEN--PWIK  342 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~h--p~~~  342 (586)
                      +.+||.+||..||.+|||+.+|++.  .++.
T Consensus       493 l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          493 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence            9999999999999999999999874  4554

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.5e-40  Score=337.86  Aligned_cols=250  Identities=23%  Similarity=0.328  Sum_probs=195.0

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhC-CCCCCeeEEEEEEEeC-
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL-PKHPNIVTYKEAYEDK-  154 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~~hpnIv~l~~~~~~~-  154 (586)
                      ..+.++|++.+.||+|+||.||+|.+  +|+.||+|++....      .....+|.+++..+ .+||||+++++++... 
T Consensus        33 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~  104 (337)
T 3mdy_A           33 RTIAKQIQMVKQIGKGRYGEVWMGKW--RGEKVAVKVFFTTE------EASWFRETEIYQTVLMRHENILGFIAADIKGT  104 (337)
T ss_dssp             TTHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEEEGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred             cccccceEEEeEeecCCCeEEEEEEE--CCceEEEEEEeccc------cchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence            34567999999999999999999976  48999999986442      23445555555543 2899999999999887 


Q ss_pred             ---CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHc--------CceeccCCCCceEeecCCCCCc
Q 043828          155 ---DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN--------GVMHRDLKPENFLFADGSENSQ  223 (586)
Q Consensus       155 ---~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------~ivHrDlkp~Nill~~~~~~~~  223 (586)
                         ..+|+|||||++|+|.+++... .+++..+..++.|++.||.|||++        ||+||||||+|||+   +.++.
T Consensus       105 ~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill---~~~~~  180 (337)
T 3mdy_A          105 GSWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV---KKNGT  180 (337)
T ss_dssp             GGGCEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEE---CTTSC
T ss_pred             CCCCceEEEEeccCCCcHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEE---CCCCC
Confidence               7899999999999999998664 699999999999999999999999        99999999999999   56789


Q ss_pred             eEEeecccccccCCCCce-----ecccCCccccchhhhhcc-CCCc------chHHHHHHHHHHHhhC----------CC
Q 043828          224 LKAIDFGLSIFFKPGEQF-----CEIVGSPYYMAPEVLRRN-YGPE------IDVWSAGVIIYILLCG----------VP  281 (586)
Q Consensus       224 vkl~Dfg~a~~~~~~~~~-----~~~~gt~~y~aPE~l~~~-~~~~------~DiwslG~il~~ll~g----------~~  281 (586)
                      +||+|||++.........     ....||+.|+|||++.+. ++..      +|||||||++|+|++|          ..
T Consensus       181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~  260 (337)
T 3mdy_A          181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL  260 (337)
T ss_dssp             EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred             EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc
Confidence            999999999765433221     245799999999999753 3333      8999999999999999          77


Q ss_pred             CCCCC-----CHHHHHHHHHhCccCCCCCC---CCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          282 PFWAE-----TEEGIAHAIIRGKIDFERDP---WPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       282 pf~~~-----~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ||...     ........+.........+.   ...++..+.+||.+||+.||.+|||+.++++|
T Consensus       261 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          261 PYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             cHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            77542     22222222222222111110   11355779999999999999999999999986

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=2.6e-41  Score=340.77  Aligned_cols=248  Identities=22%  Similarity=0.342  Sum_probs=206.6

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.+.||+|+||.||+|.+..   .+|+|++...... ....+.+.+|+.+++++ +||||+++++++.+...+++
T Consensus        32 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~i  106 (319)
T 2y4i_B           32 FEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDN-EDQLKAFKREVMAYRQT-RHENVVLFMGACMSPPHLAI  106 (319)
T ss_dssp             CSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCC-CCCCCCCCTTGGGGTTC-CCTTBCCCCEEEECSSCEEE
T ss_pred             HHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCC-HHHHHHHHHHHHHHhcC-CCCCEeEEEEEEecCCceEE
Confidence            4689999999999999999998643   5999998765322 22234567899999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC-
Q 043828          160 VMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP-  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~-  237 (586)
                      ||||++|++|.+++.... .+++..+..++.||+.||.|||++||+||||||+||+++    ++.+||+|||++..... 
T Consensus       107 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~----~~~~~l~Dfg~~~~~~~~  182 (319)
T 2y4i_B          107 ITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD----NGKVVITDFGLFSISGVL  182 (319)
T ss_dssp             ECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC------CCEECCCSCCC-----
T ss_pred             EeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe----CCCEEEeecCCccccccc
Confidence            999999999999987654 699999999999999999999999999999999999993    46899999999875431 


Q ss_pred             -----CCceecccCCccccchhhhhc----------cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCC
Q 043828          238 -----GEQFCEIVGSPYYMAPEVLRR----------NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDF  302 (586)
Q Consensus       238 -----~~~~~~~~gt~~y~aPE~l~~----------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~  302 (586)
                           ........||+.|+|||++..          .++.++|||||||++|+|++|..||...........+..+....
T Consensus       183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~  262 (319)
T 2y4i_B          183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPN  262 (319)
T ss_dssp             -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCC
T ss_pred             cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCC
Confidence                 122234568999999999853          36789999999999999999999999988888877776664332


Q ss_pred             CCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          303 ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       303 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .  ....++..+.+||.+||..||.+|||+.++++.
T Consensus       263 ~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~  296 (319)
T 2y4i_B          263 L--SQIGMGKEISDILLFCWAFEQEERPTFTKLMDM  296 (319)
T ss_dssp             C--CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHH
T ss_pred             C--CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            2  223578899999999999999999999999974

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=1e-40  Score=337.54  Aligned_cols=248  Identities=25%  Similarity=0.371  Sum_probs=203.0

Q ss_pred             ccCeeecceeccCCceEEEEEE----EccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC-
Q 043828           80 LDKYTFGKELGRGEFGITHQCF----EIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK-  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~----~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~-  154 (586)
                      .++|++++.||+|+||.||+|+    +..+|+.||+|++...   .......+.+|+.+++++ +||||+++++++... 
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~  115 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAG  115 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTC-CCTTBCCEEEEECC--
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEecC
Confidence            4689999999999999999998    4568999999998653   233456789999999999 899999999998654 


Q ss_pred             -CeEEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          155 -DAIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       155 -~~~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                       ..+++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++   +.++.+||+|||++
T Consensus       116 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli---~~~~~~kL~Dfg~~  192 (326)
T 2w1i_A          116 RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDFGLT  192 (326)
T ss_dssp             --CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---EETTEEEECCCTTC
T ss_pred             CCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEE---cCCCcEEEecCcch
Confidence             3789999999999999999875 459999999999999999999999999999999999999   45678999999999


Q ss_pred             cccCCCCce----ecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHH----------------HH
Q 043828          233 IFFKPGEQF----CEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEE----------------GI  291 (586)
Q Consensus       233 ~~~~~~~~~----~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----------------~~  291 (586)
                      .........    ....+++.|+|||++.+ .++.++|||||||++|+|++|..||......                .+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (326)
T 2w1i_A          193 KVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL  272 (326)
T ss_dssp             EECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred             hhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHH
Confidence            876543321    23457788999999864 5888999999999999999999998643111                11


Q ss_pred             HHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          292 AHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       292 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ...+.. ....+  ....++..+.+||.+||..||.+|||+.++++
T Consensus       273 ~~~~~~-~~~~~--~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          273 IELLKN-NGRLP--RPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HHHHHT-TCCCC--CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHhhc-CCCCC--CCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            122222 22222  23468999999999999999999999999986

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=6.9e-41  Score=341.16  Aligned_cols=248  Identities=23%  Similarity=0.342  Sum_probs=201.7

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhC-CCCCCeeEEEEEEEeCC--
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL-PKHPNIVTYKEAYEDKD--  155 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l-~~hpnIv~l~~~~~~~~--  155 (586)
                      +.++|++.+.||+|+||.||+|.+  +|+.||+|++...      ....+.+|+.++..+ .+||||+++++++....  
T Consensus        40 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~  111 (342)
T 1b6c_B           40 IARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGT  111 (342)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSS
T ss_pred             ccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCc
Confidence            447899999999999999999986  6899999998543      235678899998873 28999999999998876  


Q ss_pred             --eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH--------HcCceeccCCCCceEeecCCCCCceE
Q 043828          156 --AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH--------ENGVMHRDLKPENFLFADGSENSQLK  225 (586)
Q Consensus       156 --~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH--------~~~ivHrDlkp~Nill~~~~~~~~vk  225 (586)
                        .+|+||||+++|+|.+++.. ..+++..++.++.|++.||.|||        +.||+||||||+|||+   +.++.+|
T Consensus       112 ~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll---~~~~~~k  187 (342)
T 1b6c_B          112 WTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCC  187 (342)
T ss_dssp             CCCEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEE---CTTSCEE
T ss_pred             cceeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEE---CCCCCEE
Confidence              89999999999999999876 46999999999999999999999        8999999999999999   5678999


Q ss_pred             EeecccccccCCCCc-----eecccCCccccchhhhhcc-------CCCcchHHHHHHHHHHHhhC----------CCCC
Q 043828          226 AIDFGLSIFFKPGEQ-----FCEIVGSPYYMAPEVLRRN-------YGPEIDVWSAGVIIYILLCG----------VPPF  283 (586)
Q Consensus       226 l~Dfg~a~~~~~~~~-----~~~~~gt~~y~aPE~l~~~-------~~~~~DiwslG~il~~ll~g----------~~pf  283 (586)
                      |+|||++........     .....||+.|+|||++.+.       ++.++|||||||++|+|++|          ..||
T Consensus       188 L~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~  267 (342)
T 1b6c_B          188 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY  267 (342)
T ss_dssp             ECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred             EEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCc
Confidence            999999987654432     2345799999999998653       23679999999999999999          7898


Q ss_pred             CCC-----CHHHHHHHHHhCccCCCCCC-C--CCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          284 WAE-----TEEGIAHAIIRGKIDFERDP-W--PKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       284 ~~~-----~~~~~~~~i~~~~~~~~~~~-~--~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ...     ........+.........+. +  ...+..+.+||.+||+.||.+|||+.++++|
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          268 YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             TTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             cccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            654     23344444433332221111 0  1234578999999999999999999999986

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=5.3e-40  Score=360.99  Aligned_cols=249  Identities=23%  Similarity=0.348  Sum_probs=208.8

Q ss_pred             cccCeeecceeccCCceEEEEEEEccC---CcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIET---GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      ..++|++++.||+|+||.||+|.+..+   +..+|+|++....  .....+.+.+|+.+++++ +||||+++++++. ++
T Consensus       388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~-~~  463 (656)
T 2j0j_A          388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT--SDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-EN  463 (656)
T ss_dssp             CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEC-SS
T ss_pred             ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEe-cC
Confidence            346899999999999999999988654   4578999875432  333456789999999999 8999999999985 46


Q ss_pred             eEEEEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      .+|+||||+++|+|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++..
T Consensus       464 ~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl---~~~~~vkL~DFG~a~~  540 (656)
T 2j0j_A          464 PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRY  540 (656)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECCCCCCCS
T ss_pred             ceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEE---eCCCCEEEEecCCCee
Confidence            7899999999999999998654 68999999999999999999999999999999999999   4567999999999987


Q ss_pred             cCCCCc--eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          235 FKPGEQ--FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       235 ~~~~~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      ......  .....+|+.|+|||++. ..++.++|||||||++|+|++ |..||.+....+....+..+....   ..+.+
T Consensus       541 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~---~~~~~  617 (656)
T 2j0j_A          541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP---MPPNC  617 (656)
T ss_dssp             CCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCC---CCTTC
T ss_pred             cCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCC---CCccc
Confidence            644322  22345778999999986 468999999999999999997 999999998888888877664322   22468


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ++.+.+||.+||..||.+|||+.++++
T Consensus       618 ~~~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          618 PPTLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            899999999999999999999999986

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=3.9e-41  Score=351.28  Aligned_cols=249  Identities=16%  Similarity=0.196  Sum_probs=193.1

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCC-CC--------------
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH-PN--------------  143 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~h-pn--------------  143 (586)
                      ....|++.+.||+|+||+||+|.+..+|+.||||++...........+.+.+|+.+++.+ .| +|              
T Consensus        76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l-~~~~~~~~~~~~~~~~~~~  154 (413)
T 3dzo_A           76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLL-RGIKNQKQAKVHLRFIFPF  154 (413)
T ss_dssp             CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGS-TTCCSHHHHHHHTCBCCCC
T ss_pred             CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhh-ccCCCHHHHHHhcccccch
Confidence            345699999999999999999999999999999998755444444467899999999998 55 21              


Q ss_pred             -------eeEEEEEEEe-----CCeEEEEEeccCCCChHHHHHh-------CCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 043828          144 -------IVTYKEAYED-----KDAIYLVMELCEGGELFDRIVN-------KGHYTERAAAAVGKTILRIVKVCHENGVM  204 (586)
Q Consensus       144 -------Iv~l~~~~~~-----~~~~~iv~E~~~gg~L~~~l~~-------~~~~~~~~~~~i~~qi~~~l~~lH~~~iv  204 (586)
                             ...+..++..     ...++++|+++ +++|.+++..       ...+++..+..++.||+.||.|||++||+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ii  233 (413)
T 3dzo_A          155 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLV  233 (413)
T ss_dssp             EEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence                   1112222222     23577888876 6799888741       23477888999999999999999999999


Q ss_pred             eccCCCCceEeecCCCCCceEEeecccccccCCCCceecccCCccccchhhhh----------c-cCCCcchHHHHHHHH
Q 043828          205 HRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR----------R-NYGPEIDVWSAGVII  273 (586)
Q Consensus       205 HrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~----------~-~~~~~~DiwslG~il  273 (586)
                      ||||||+|||+   +.++.+||+|||++.....  .....+| +.|+|||++.          . .|+.++|||||||++
T Consensus       234 HrDiKp~NILl---~~~~~~kL~DFG~a~~~~~--~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil  307 (413)
T 3dzo_A          234 HTYLRPVDIVL---DQRGGVFLTGFEHLVRDGA--SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI  307 (413)
T ss_dssp             CSCCCGGGEEE---CTTCCEEECCGGGCEETTE--EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred             cCCcccceEEE---ecCCeEEEEeccceeecCC--ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence            99999999999   5677899999999876432  2455678 9999999983          1 377799999999999


Q ss_pred             HHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          274 YILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       274 ~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      |+|++|..||...+.......+        ...+..+++.+.+||.+||..||.+|||+.++++||||+.
T Consensus       308 ~elltg~~Pf~~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~  369 (413)
T 3dzo_A          308 YWIWCADLPNTDDAALGGSEWI--------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ  369 (413)
T ss_dssp             HHHHHSSCCCCTTGGGSCSGGG--------GSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             HHHHHCCCCCCCcchhhhHHHH--------HhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence            9999999999776543222211        1223468899999999999999999999999999999974

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=1.9e-40  Score=328.67  Aligned_cols=228  Identities=12%  Similarity=0.064  Sum_probs=188.3

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      +.++|++.+.||+|+||.||+|++..+|+.||+|++.............+.+|+.++.++ +||||+++++++.+.+.+|
T Consensus        29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~iv~~~~~~~~~~~~~  107 (286)
T 3uqc_A           29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-DKPGVARVLDVVHTRAGGL  107 (286)
T ss_dssp             TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEETTEEE
T ss_pred             ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcC-CCCCcceeeEEEEECCcEE
Confidence            446899999999999999999999999999999999876655555567889999999999 9999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      +||||++|++|.+++...  .....+..++.||+.||.|||++||+||||||+|||+   +.++.+||+++|        
T Consensus       108 lv~e~~~g~~L~~~l~~~--~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll---~~~g~~kl~~~~--------  174 (286)
T 3uqc_A          108 VVAEWIRGGSLQEVADTS--PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRV---SIDGDVVLAYPA--------  174 (286)
T ss_dssp             EEEECCCEEEHHHHHTTC--CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE---ETTSCEEECSCC--------
T ss_pred             EEEEecCCCCHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEE---cCCCCEEEEecc--------
Confidence            999999999999998543  4666788999999999999999999999999999999   466788987443        


Q ss_pred             CceecccCCccccchhhhhccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHH---HHHhCccCCCCCCCCCCCHHHH
Q 043828          239 EQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAH---AIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                                 |++|      ++.++|||||||++|+|++|..||.+.+......   ....+....+....+.+++.+.
T Consensus       175 -----------~~~~------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  237 (286)
T 3uqc_A          175 -----------TMPD------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQIS  237 (286)
T ss_dssp             -----------CCTT------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHH
T ss_pred             -----------ccCC------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHH
Confidence                       4443      6889999999999999999999998754321110   0011111111112356899999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcC
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +||.+||+.||.+| |+.|+++.
T Consensus       238 ~li~~~l~~dP~~R-s~~el~~~  259 (286)
T 3uqc_A          238 AVAARSVQGDGGIR-SASTLLNL  259 (286)
T ss_dssp             HHHHHHHCTTSSCC-CHHHHHHH
T ss_pred             HHHHHHcccCCccC-CHHHHHHH
Confidence            99999999999999 99999874

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.4e-40  Score=365.97  Aligned_cols=243  Identities=24%  Similarity=0.323  Sum_probs=201.2

Q ss_pred             CcccCeeecceeccCCceEEEEEEEcc-CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIE-TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      .+.++|++.+.||+|+||+||+|.+.. +|+.||+|++....  .......+.+|+.+++++ +||||+++++++...+.
T Consensus        77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~  153 (681)
T 2pzi_A           77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG--DAEAQAMAMAERQFLAEV-VHPSIVQIFNFVEHTDR  153 (681)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC--CHHHHHHHHHHHGGGGGC-CCTTBCCEEEEEEEECT
T ss_pred             EeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC--CHHHHHHHHHHHHHHHhc-CCCCcCeEeeeEeecCC
Confidence            345899999999999999999999976 78999999986532  233456788999999999 89999999999987655


Q ss_pred             -----EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          157 -----IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       157 -----~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                           +||||||++|++|.+++..  .+++..+..++.||+.||.|||++||+||||||+|||++   . +.+||+|||+
T Consensus       154 ~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~---~-~~~kl~DFG~  227 (681)
T 2pzi_A          154 HGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT---E-EQLKLIDLGA  227 (681)
T ss_dssp             TSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---S-SCEEECCCTT
T ss_pred             CCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEe---C-CcEEEEeccc
Confidence                 7999999999999887654  799999999999999999999999999999999999994   3 3899999999


Q ss_pred             ccccCCCCceecccCCccccchhhhhccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCC
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS  311 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  311 (586)
                      +......   ....||+.|+|||++.+.++.++|||||||++|+|++|.+||.+....         ... ...+....+
T Consensus       228 a~~~~~~---~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~---------~~~-~~~~~~~~~  294 (681)
T 2pzi_A          228 VSRINSF---GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVD---------GLP-EDDPVLKTY  294 (681)
T ss_dssp             CEETTCC---SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECS---------SCC-TTCHHHHHC
T ss_pred             chhcccC---CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccc---------ccc-ccccccccC
Confidence            9876443   456799999999999887888999999999999999999988642110         000 111112246


Q ss_pred             HHHHHHHHHccCCCCCCCCCHHHHhcCCCcc
Q 043828          312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIK  342 (586)
Q Consensus       312 ~~~~~li~~~L~~dp~~Rps~~eil~hp~~~  342 (586)
                      +.+.+||.+||.+||.+||+..+.+.|+|+.
T Consensus       295 ~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          295 DSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             HHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence            7899999999999999999999999998874

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=100.00  E-value=4.1e-35  Score=316.31  Aligned_cols=231  Identities=17%  Similarity=0.149  Sum_probs=160.7

Q ss_pred             eeccCCceEEEEEEEccCCcEEEEEEeeccccCC-------hhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           88 ELGRGEFGITHQCFEIETGETYACKKIAKEKLKT-------EIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        88 ~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~-------~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      .++.|+.|.+..++....|+.||+|++.+.....       +...+.+.+|+++|+++..|+||+++++++++++.+|||
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV  320 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV  320 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence            4677888888888888899999999998653221       334567999999999998899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC-C
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-E  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~  239 (586)
                      ||||+|++|.++|...+++++.   .|+.||+.||.|||++|||||||||+|||+   +.++.+||+|||+|+..... .
T Consensus       321 MEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL---~~dg~vKL~DFGlAr~~~~~~~  394 (569)
T 4azs_A          321 MEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMV---DARQHARLIDFGSIVTTPQDCS  394 (569)
T ss_dssp             EECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEE---CTTSCEEECCCTTEESCC---C
T ss_pred             EecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEE---CCCCCEEEeecccCeeCCCCCc
Confidence            9999999999999998888775   478999999999999999999999999999   56789999999999876433 3


Q ss_pred             ceecccCCccccchhhhhccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHH
Q 043828          240 QFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVK  319 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~  319 (586)
                      ...+.+||+.|||||++.+.+..++|+||+|++++.|.++..|+.        ..+...    +...     ..+..+..
T Consensus       395 ~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~~~~~--------~~l~~~----~~~~-----~~~~~l~~  457 (569)
T 4azs_A          395 WPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSNWL--------YAVWQE----PVER-----WNFVLLLA  457 (569)
T ss_dssp             CSHHHHHHHHHHHHHHC-----------------CCCCTTHHHHH--------HHHHTS----CGGG-----CSHHHHHH
T ss_pred             cccCceechhhccHHHhCCCCCCcccccccccchhhhccccchhH--------HHhhcC----CCCC-----CcHHHHHH
Confidence            345678999999999999888889999999999998877755431        111111    1111     12455666


Q ss_pred             HccCCCCCCCCCHHHHhcCCCc
Q 043828          320 NMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       320 ~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      .++..+|..||.......|+|.
T Consensus       458 ~l~~~~~~~~~~~~~~~~~~~~  479 (569)
T 4azs_A          458 LFEKKAKLPSAEQQRGATEQWI  479 (569)
T ss_dssp             HHHTGGGSCCGGGSSCCHHHHH
T ss_pred             HHhCCCCCCCCChhhhccchhH
Confidence            6777777777766655555554

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=99.97  E-value=5.1e-33  Score=278.43  Aligned_cols=262  Identities=17%  Similarity=0.201  Sum_probs=210.9

Q ss_pred             CCCCCHHHHHHHHHcc---CCCCCCCCCHHHHhcC------CCccCCCCCC------------------Cc-----cCCC
Q 043828          307 WPKVSKEAKELVKNML---DPNPYNRLTLEEVLEN------PWIKNDNHAP------------------NV-----SLGG  354 (586)
Q Consensus       307 ~~~~~~~~~~li~~~L---~~dp~~Rps~~eil~h------p~~~~~~~~~------------------~~-----~~~~  354 (586)
                      |.+++.++.+|.++++   ..+|..|.+.++.+.|      +|+.......                  ..     ....
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~g~~~~e~q~~~   93 (323)
T 1ij5_A           14 VKKVHENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAARGDAAAEKQRLA   93 (323)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhhhHHHHHHHHhhcCCCCCcchhhH
Confidence            3456778899999998   8899999999999988      8886531100                  00     0001


Q ss_pred             ccccchh-hhhhhhhhhhhhhhhcccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhc
Q 043828          355 NVTSRIK-QFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAAD  433 (586)
Q Consensus       355 ~~~~~~~-~~~~~~~l~~~~l~~~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D  433 (586)
                      .+..+++ +|...+.+++     ++..++.+++..+..+|..+|.|++|.|+.+||..+|..+|..++..++..+|..+|
T Consensus        94 ~vl~~l~~~f~~~~~lkk-----~~~~Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~lg~~~~~~~i~~l~~~~D  168 (323)
T 1ij5_A           94 SLLKDLEDDASGYNRLRP-----SKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVE  168 (323)
T ss_dssp             HHHHHC------------------CCCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhHHH-----HHHhCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhc
Confidence            1122222 3333333322     456788999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHH-HHHHhcCCCCCc
Q 043828          434 VDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRD-ILRDVDLDRDGR  512 (586)
Q Consensus       434 ~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~-~~~~~d~~~dg~  512 (586)
                      .|++|.|+|.+|+.+..      ....++.+|..||.|++|+|+.+||..+|  +|..++ ..++.. ++..+|.|+||.
T Consensus       169 ~d~~G~I~f~ef~~l~~------~~~~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~-~~ei~~~l~~~~D~d~dG~  239 (323)
T 1ij5_A          169 NDTKGRMSYITLVAVAN------DLAALVADFRKIDTNSNGTLSRKEFREHF--VRLGFD-KKSVQDALFRYADEDESDD  239 (323)
T ss_dssp             HCCSSTHHHHHHTTSHH------HHHTSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCC-CHHHHHHHHHHHCTTCSSC
T ss_pred             CCCCCcCcHHHHHhhhh------HHHHHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCC-HHHHHHHHHHHhcCCCCCE
Confidence            99999999999987542      23447778999999999999999999999  677666 777999 999999999999


Q ss_pred             eeHHHHHHHHhcchHHHHHHHhhhhhccCcccHHHHHHHH-HhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          513 ISFEEFKAMMTSGADWKMASRQYSRAMMSALSIKLFKDKS-MELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       513 i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~~-~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      |+|+||+.++.....+..+|+.||.|++|+|+.+||+.++ ..+|..++++++..|+..+|.|+||.|++.
T Consensus       240 Is~~EF~~~l~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~ls~~e~~~l~~~~D~d~dG~Is~~  310 (323)
T 1ij5_A          240 VGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQ  310 (323)
T ss_dssp             EEHHHHHHHHHHHHHHHHHHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHH
T ss_pred             EeHHHHHHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHH
Confidence            9999999999877789999999999999999999999999 999999999999999999999999999974

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=99.97  E-value=4.8e-30  Score=250.80  Aligned_cols=203  Identities=20%  Similarity=0.340  Sum_probs=180.6

Q ss_pred             CCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCH------HHHHHHHHHhcCCCCCcccHhHHHhhhhhh-
Q 043828          380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSD------PDVKMLMEAADVDGNGLLSCDEFVTMSVHL-  452 (586)
Q Consensus       380 ~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~------~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-  452 (586)
                      .+.+.+.++++++|..+|.|++|.|+.+||..+|+.+|..++.      .++..+|..+|.|++|.|+|+||+.++... 
T Consensus         9 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~~   88 (263)
T 2f33_A            9 QSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEE   88 (263)
T ss_dssp             TTSCCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSCT
T ss_pred             hcCcccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhhh
Confidence            4566778899999999999999999999999999988755554      789999999999999999999999876432 


Q ss_pred             --------ccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhc----CCCCCCHHHHHH----HHHHhcCCCCCceeHH
Q 043828          453 --------KRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLED----NAGPNGDQTIRD----ILRDVDLDRDGRISFE  516 (586)
Q Consensus       453 --------~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~----~~~~~~~~~~~~----~~~~~d~~~dg~i~~~  516 (586)
                              ......++++.+|+.+|.|++|+|+.+||..+|..+    |...+ ..++..    ++..+|.|++|.|+|+
T Consensus        89 ~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~-~~~~~~~~~~~~~~~d~~~dg~i~~~  167 (263)
T 2f33_A           89 NFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVD-DTKLAEYTDLMLKLFDSNNDGKLELT  167 (263)
T ss_dssp             THHHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHTCSSSSSCBCHH
T ss_pred             hHHHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCC-HHHHHHHHHHHHHhcCCCCCCeEcHH
Confidence                    345567889999999999999999999999999987    77666 777766    9999999999999999


Q ss_pred             HHHHHHhc--------------chHHHHHHHhhhhhccCcccHHHHHHHHHhhcc----cCChhhHHHHHHh-hccCCCc
Q 043828          517 EFKAMMTS--------------GADWKMASRQYSRAMMSALSIKLFKDKSMELTK----SMELNKSMELKKS-VELKKSG  577 (586)
Q Consensus       517 eF~~~~~~--------------~~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~----~~~~~~~~~~~~~-~d~~~dg  577 (586)
                      ||+.++..              ...++.+|+.||+|++|+|+.+||+.++..+|.    .+++++++.+++. +|.|+||
T Consensus       168 ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~~~~~~~~e~~~~~~~~~D~d~dG  247 (263)
T 2f33_A          168 EMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGG  247 (263)
T ss_dssp             HHHHHSCTTTCSHHHHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHCTTTCCTTTHHHHHHHHHTTSBTT
T ss_pred             HHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhccCCCC
Confidence            99998764              267899999999999999999999999999988    8999999999998 7999999


Q ss_pred             eEecCC
Q 043828          578 QLRIPH  583 (586)
Q Consensus       578 ~i~~~~  583 (586)
                      .|++.+
T Consensus       248 ~i~~~E  253 (263)
T 2f33_A          248 KLYRTD  253 (263)
T ss_dssp             EECGGG
T ss_pred             eEcHHH
Confidence            999864

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=99.96  E-value=8.6e-29  Score=243.11  Aligned_cols=202  Identities=20%  Similarity=0.315  Sum_probs=176.6

Q ss_pred             CCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHH----hcCC--CCCHHHHHHH----HHHhcCCCCCcccHhHHHhhh
Q 043828          380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLN----MIGQ--KVSDPDVKML----MEAADVDGNGLLSCDEFVTMS  449 (586)
Q Consensus       380 ~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~----~~~~--~~~~~~~~~~----~~~~D~d~dg~i~~~eF~~~~  449 (586)
                      .+...+.++++++|..+|.|++|.|+.+||..+|+    .+|.  .++..++..+    |..+|.|++|.|+|+||+.++
T Consensus         4 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~   83 (272)
T 2be4_A            4 AFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMI   83 (272)
T ss_dssp             CCCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHH
T ss_pred             HHHhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHH
Confidence            34556677899999999999999999999999999    8898  8999888764    478899999999999999873


Q ss_pred             -----------hhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhc----CCCCCCHHHHH----HHHHHhcCCCC
Q 043828          450 -----------VHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLED----NAGPNGDQTIR----DILRDVDLDRD  510 (586)
Q Consensus       450 -----------~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~----~~~~~~~~~~~----~~~~~~d~~~d  510 (586)
                                 .........++++.+|+.+|.|++|.|+.+||..++..+    |...+ ..++.    .++..+|.|++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~-~~~~~~~~~~~~~~~D~~~d  162 (272)
T 2be4_A           84 LPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIP-PNKLDEYTDAMMKIFDKNKD  162 (272)
T ss_dssp             SCHHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHHHHCSSCS
T ss_pred             hhhhHHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCC-HHHHHHHHHHHHHHhccCCC
Confidence                       233335667889999999999999999999999999987    66665 66654    49999999999


Q ss_pred             CceeHHHHHHHHhc------------------chHHHHHHHhhhhhccCcccHHHHHHHHHhhcc----cCChhhHHH--
Q 043828          511 GRISFEEFKAMMTS------------------GADWKMASRQYSRAMMSALSIKLFKDKSMELTK----SMELNKSME--  566 (586)
Q Consensus       511 g~i~~~eF~~~~~~------------------~~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~----~~~~~~~~~--  566 (586)
                      |.|+|+||+.++..                  ...++.+|+.||+|++|+|+.+||+.++..++.    .+++++++.  
T Consensus       163 g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~  242 (272)
T 2be4_A          163 GRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFR  242 (272)
T ss_dssp             SEEEHHHHGGGSCCSSCSSTTSCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHHHHSSSCCHHHHHHHH
T ss_pred             CcCcHHHHHHHHhhhHHHHhhhhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHHHcCCCCCHHHHHHHH
Confidence            99999999998753                  156899999999999999999999999998887    799999887  


Q ss_pred             --HHHhhccCCCceEecC
Q 043828          567 --LKKSVELKKSGQLRIP  582 (586)
Q Consensus       567 --~~~~~d~~~dg~i~~~  582 (586)
                        +++.+|.|+||+|++.
T Consensus       243 ~~l~~~~D~d~dG~is~~  260 (272)
T 2be4_A          243 ECLLTHCDMNKDGKIQKS  260 (272)
T ss_dssp             HHHHHHHCCSTTCEEEHH
T ss_pred             HHHHHHhCCCCCCcCcHH
Confidence              9999999999999974

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=99.95  E-value=5.5e-27  Score=222.24  Aligned_cols=187  Identities=21%  Similarity=0.212  Sum_probs=169.2

Q ss_pred             hhhhhhhhhhhhhhhcccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCccc
Q 043828          362 QFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLS  441 (586)
Q Consensus       362 ~~~~~~~l~~~~l~~~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~  441 (586)
                      .+.....+++.....+...++.++.++++++|..+|.|++|.|+.+||..+++.+|..++.++++.+|+.+|.|++|.|+
T Consensus        26 ~~~~~~~~~~~~~~~~~~~l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~  105 (220)
T 3sjs_A           26 IYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHIS  105 (220)
T ss_dssp             HHHSCHHHHTSTTGGGGGGCCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBC
T ss_pred             ccCCChhHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCC
Confidence            34445566777777788889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHH
Q 043828          442 CDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAM  521 (586)
Q Consensus       442 ~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~  521 (586)
                      |+||+.++...      +.++.+|+.+|+|++|+|+.+||..++..+|...+ +++++.+++.+| |+||.|+|+||+.+
T Consensus       106 ~~EF~~~~~~~------~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~-~~~~~~l~~~~d-d~dg~I~~~eF~~~  177 (220)
T 3sjs_A          106 FYEFMAMYKFM------ELAYNLFVMNARARSGTLEPHEILPALQQLGFYIN-QRTSLLLHRLFA-RGMAFCDLNCWIAI  177 (220)
T ss_dssp             HHHHHHHHHHH------HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCC-HHHHHHHHHHHC---CCSEEHHHHHHH
T ss_pred             HHHHHHHHHHH------HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCC-HHHHHHHHHHhc-CCCCcCcHHHHHHH
Confidence            99999977653      56999999999999999999999999999998776 889999999999 99999999999999


Q ss_pred             HhcchHHHHHHHhh-hhhccC------cccHHHHHHHHHhhc
Q 043828          522 MTSGADWKMASRQY-SRAMMS------ALSIKLFKDKSMELT  556 (586)
Q Consensus       522 ~~~~~~~~~~F~~~-D~d~~G------~i~~~el~~~~~~~g  556 (586)
                      +.....++.+|+.+ |++++|      .|+.+|+..++..+.
T Consensus       178 ~~~l~~~~~~F~~~~D~~~~G~i~~~~~i~~~ef~~~~~~~~  219 (220)
T 3sjs_A          178 CAFAAQTRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVTSLL  219 (220)
T ss_dssp             HHHHHHHHHHHHHHHTSGGGCSCCCCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHhcccCCCCCcccccceeHHHHHHHHHHhc
Confidence            99888999999999 999999      789999998877654

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=99.94  E-value=1.4e-27  Score=222.55  Aligned_cols=186  Identities=27%  Similarity=0.499  Sum_probs=151.5

Q ss_pred             cCCCccCCCCCCCccCCCccccchhhhhhhhhhhhhhhhhcccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhc
Q 043828          337 ENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI  416 (586)
Q Consensus       337 ~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~  416 (586)
                      .|||.+.. ..+.+++...+..++++|...+++++..+..++..++.+++..++++|..+|.|++|.|+.+||..+|..+
T Consensus         8 ~~~~~~~~-~~~~~~l~~~~~~~l~~f~~~~~lk~~~l~~i~~~l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~   86 (197)
T 3pm8_A            8 SSGRENLY-FQGHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKI   86 (197)
T ss_dssp             ----------CCSCCCCTTHHHHHHHTTTSCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             cchHhhhc-cCCCCCCCHHHHHHHHHHHHccHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHh
Confidence            58999865 35677788889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhc--CCCCCC
Q 043828          417 GQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLED--NAGPNG  494 (586)
Q Consensus       417 ~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~--~~~~~~  494 (586)
                      |..++..++..+|+.+|.|++|.|+|+||+.++........++.++.+|+.||.|++|+|+.+||..++...  +...+ 
T Consensus        87 g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~-  165 (197)
T 3pm8_A           87 GYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLI-  165 (197)
T ss_dssp             C----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHH-
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCC-
Confidence            999999999999999999999999999999977666666778899999999999999999999999999887  44444 


Q ss_pred             HHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          495 DQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       495 ~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ++++..+|..+|.|+||.|+|+||+.+|..
T Consensus       166 ~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~  195 (197)
T 3pm8_A          166 DKAIDSLLQEVDLNGDGEIDFHEFMLMMSK  195 (197)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHC
T ss_pred             HHHHHHHHHHHcCCCCCcCcHHHHHHHHHc
Confidence            788999999999999999999999999875

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.94  E-value=8.8e-28  Score=257.65  Aligned_cols=184  Identities=21%  Similarity=0.205  Sum_probs=144.1

Q ss_pred             eecceeccCCceEEEEEEEccCCcEEEEEEeeccccCCh-----hcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           84 TFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE-----IDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        84 ~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~-----~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ...+.||+|+||.||+|  ...+..+++|+.........     ...+.+.+|+.+++++ +||||+++..++...+..|
T Consensus       339 ~~~~~LG~G~fg~Vy~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~~~~~  415 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRD--SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-KDFGIPAPYIFDVDLDNKR  415 (540)
T ss_dssp             ---------CCEEEEEE--ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-GGGTCCCCCEEEEETTTTE
T ss_pred             CCCCEEeeCCCEEEEEE--EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-CCCCcCceEEEEEeCCccE
Confidence            44568999999999999  45688999998765433322     1234579999999999 8999995555555777789


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||||+|++|.+++..        +..++.|++.||.|||++||+||||||+|||++   .  .+||+|||+++.....
T Consensus       416 lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~---~--~~kL~DFGla~~~~~~  482 (540)
T 3en9_A          416 IMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFD---K--DLYIIDFGLGKISNLD  482 (540)
T ss_dssp             EEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEES---S--SEEECCCTTCEECCCH
T ss_pred             EEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEEC---C--eEEEEECccCEECCCc
Confidence            99999999999998865        668999999999999999999999999999994   3  9999999999887543


Q ss_pred             Cc--------eecccCCccccchhhhh---ccCCCcchHHHHHHHHHHHhhCCCCC
Q 043828          239 EQ--------FCEIVGSPYYMAPEVLR---RNYGPEIDVWSAGVIIYILLCGVPPF  283 (586)
Q Consensus       239 ~~--------~~~~~gt~~y~aPE~l~---~~~~~~~DiwslG~il~~ll~g~~pf  283 (586)
                      ..        ....+||+.|||||++.   ..|+..+|+||..+-..+.+.++.+|
T Consensus       483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            22        13568999999999986   35888899999999888887777665

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=99.94  E-value=5.1e-26  Score=207.16  Aligned_cols=162  Identities=19%  Similarity=0.265  Sum_probs=147.1

Q ss_pred             hhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcC-CCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHH
Q 043828          384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIG-QKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILS  462 (586)
Q Consensus       384 ~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~-~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~  462 (586)
                      .+.++++++|..+|.|++|.|+.+||..+++.+| ..++..++..+|+.+|.|++|.|+|+||+.++...      ..++
T Consensus         4 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~~------~~~~   77 (172)
T 2znd_A            4 PDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI------TDWQ   77 (172)
T ss_dssp             --CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHHH------HHHH
T ss_pred             cchhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHH
Confidence            3557899999999999999999999999999988 78899999999999999999999999999876543      5699


Q ss_pred             HHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhhhhhccCc
Q 043828          463 QAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSA  542 (586)
Q Consensus       463 ~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~  542 (586)
                      .+|+.+|.|++|+|+.+||..++..+|...+ ++++..++..+|.|+||.|+|+||+.++.....++.+|+.+|+|++|+
T Consensus        78 ~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~-~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~dG~  156 (172)
T 2znd_A           78 NVFRTYDRDNSGMIDKNELKQALSGFGYRLS-DQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGW  156 (172)
T ss_dssp             HHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHCTTSSSC
T ss_pred             HHHHHHCCCCCCccCHHHHHHHHHHcCCCCC-HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCe
Confidence            9999999999999999999999999987766 889999999999999999999999999998889999999999999999


Q ss_pred             ccHHHHHHHHH
Q 043828          543 LSIKLFKDKSM  553 (586)
Q Consensus       543 i~~~el~~~~~  553 (586)
                      |+.+ +.+++.
T Consensus       157 i~~~-~~ef~~  166 (172)
T 2znd_A          157 IQVS-YEQYLS  166 (172)
T ss_dssp             CCCC-HHHHHH
T ss_pred             Eeee-HHHHHH
Confidence            9875 555543

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=99.93  E-value=4.4e-26  Score=207.80  Aligned_cols=161  Identities=17%  Similarity=0.270  Sum_probs=148.9

Q ss_pred             hhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhc-C-------CCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccC
Q 043828          384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI-G-------QKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRI  455 (586)
Q Consensus       384 ~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~-~-------~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~  455 (586)
                      +++++++++|..+| |++|.|+.+||..+++.+ |       ..++.+++..+|+.+|.|++|.|+|+||+.++...   
T Consensus         1 e~~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~---   76 (173)
T 1alv_A            1 EEVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI---   76 (173)
T ss_dssp             CHHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH---
T ss_pred             CchhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHHH---
Confidence            36788999999999 999999999999999987 6       77889999999999999999999999999876542   


Q ss_pred             CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhh
Q 043828          456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQY  535 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~  535 (586)
                         +.++.+|+.+|+|++|+|+.+||..+|..+|...+ ++++..++..+| |++|.|+|+||+.++.....+..+|+.+
T Consensus        77 ---~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~-~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~~~~~~~~F~~~  151 (173)
T 1alv_A           77 ---KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLN-EHLYSMIIRRYS-DEGGNMDFDNFISCLVRLDAMFRAFKSL  151 (173)
T ss_dssp             ---HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCC-HHHHHHHHHHHT-CSSSCBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCC-HHHHHHHHHHhc-CCCCcCcHHHHHHHHHHHHHHHHHHHHh
Confidence               56999999999999999999999999999998776 889999999999 9999999999999999888999999999


Q ss_pred             hhhccCcccHHHHHHHHHh
Q 043828          536 SRAMMSALSIKLFKDKSME  554 (586)
Q Consensus       536 D~d~~G~i~~~el~~~~~~  554 (586)
                      |+|++|+|+.+ +++++..
T Consensus       152 D~d~~G~i~~~-~~~~l~~  169 (173)
T 1alv_A          152 DKDGTGQIQVN-IQEWLQL  169 (173)
T ss_dssp             SSSCCSEEEEE-HHHHHHH
T ss_pred             CCCCCCeecHh-HHHHHHH
Confidence            99999999999 8888754

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=99.93  E-value=2.3e-25  Score=206.52  Aligned_cols=162  Identities=21%  Similarity=0.358  Sum_probs=149.3

Q ss_pred             HhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHH
Q 043828          386 MAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAF  465 (586)
Q Consensus       386 ~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F  465 (586)
                      .++++++|..+|.|++|.|+.+||..++..+|..++.+++..+|+.+|.|++|.|+|+||+.++...      +.++.+|
T Consensus        26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~------~~~~~~F   99 (191)
T 1y1x_A           26 NQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI------LSMREGF   99 (191)
T ss_dssp             TSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH------HHHHHHH
Confidence            4678999999999999999999999999888889999999999999999999999999999876542      5699999


Q ss_pred             hhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhhhhhccCc--c
Q 043828          466 RFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSA--L  543 (586)
Q Consensus       466 ~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~--i  543 (586)
                      +.+|.|++|+|+.+||..++..+|...+ ++++..++..+|.|+||.|+|+||+.++.....++.+|+.+|+|++|.  +
T Consensus       100 ~~~D~d~~G~i~~~e~~~~l~~~g~~~~-~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~dG~i~~  178 (191)
T 1y1x_A          100 RKRDSSGDGRLDSNEVRAALLSSGYQVS-EQTFQALMRKFDRQRRGSLGFDDYVELSIFVCRVRNVFAFYDRERTGQVTF  178 (191)
T ss_dssp             HHHCTTSSSCBCHHHHHHHHHTTSCCCC-HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEE
T ss_pred             HHhCCCCCCeEcHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHHHHHHHHHHHhCcCCCceEEe
Confidence            9999999999999999999999988666 899999999999999999999999999998889999999999999999  6


Q ss_pred             cHHHHHHHHHh
Q 043828          544 SIKLFKDKSME  554 (586)
Q Consensus       544 ~~~el~~~~~~  554 (586)
                      +.+|+..++..
T Consensus       179 ~~~eF~~~~~~  189 (191)
T 1y1x_A          179 TFDTFIGGSVS  189 (191)
T ss_dssp             EHHHHHHHHHH
T ss_pred             eHHHHHHHHHh
Confidence            68888877643

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=99.93  E-value=6.8e-26  Score=209.98  Aligned_cols=184  Identities=28%  Similarity=0.484  Sum_probs=154.1

Q ss_pred             cCCCccCCCCCCCccCCCccccchhhhhhhhhhhhhhhhhcccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhc
Q 043828          337 ENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI  416 (586)
Q Consensus       337 ~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~  416 (586)
                      .|||+-.. ..+...+...+..++++|...+++++..+..++..++.+++.+++++|..+|.|++|.|+.+||..+++.+
T Consensus         3 ~~~~~~~~-~~~~~~l~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~   81 (191)
T 3k21_A            3 HHHHHSSG-RENLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKD   81 (191)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHT
T ss_pred             CCccccCC-ccccccccHHHHHHHHHHHhhHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHc
Confidence            46666532 23444556678889999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcC--CCCCC
Q 043828          417 GQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDN--AGPNG  494 (586)
Q Consensus       417 ~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~--~~~~~  494 (586)
                      |..++ .++..+|+.+|.|++|.|+|+||+.++.... ....+.++.+|+.+|.|++|+|+.+||..++...+  ...+.
T Consensus        82 g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~-~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~  159 (191)
T 3k21_A           82 GLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRK-QLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQ  159 (191)
T ss_dssp             TCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGG-GCCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCH
T ss_pred             CCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhh-hccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCH
Confidence            99888 8999999999999999999999998764433 35677899999999999999999999999998743  33331


Q ss_pred             --HHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          495 --DQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       495 --~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                        .+++..+|..+|.|+||.|+|+||+.++.
T Consensus       160 ~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~  190 (191)
T 3k21_A          160 RDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK  190 (191)
T ss_dssp             HHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred             hHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence              24689999999999999999999999875

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=99.93  E-value=2.7e-25  Score=197.00  Aligned_cols=144  Identities=28%  Similarity=0.569  Sum_probs=133.7

Q ss_pred             CCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh-hccCCch
Q 043828          380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH-LKRIGND  458 (586)
Q Consensus       380 ~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~-~~~~~~~  458 (586)
                      .++++++++++++|..+|.|++|.|+.+||..+++.+|.+++..++..++..+|.+++|.|+|.||+..+.. ......+
T Consensus         3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~   82 (148)
T 2lmt_A            3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTE   82 (148)
T ss_dssp             SCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTH
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcH
Confidence            477899999999999999999999999999999999999999999999999999999999999999985543 3444567


Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      +.++.+|+.||+|++|+|+.+||+.+|..+|...+ ..++..+++.+|.|+||.|+|+||+++|..
T Consensus        83 ~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~-~~e~~~l~~~~D~d~dG~I~~~EF~~~m~~  147 (148)
T 2lmt_A           83 EEMREAFKIFDRDGDGFISPAELRFVMINLGEKVT-DEEIDEMIREADFDGDGMINYEEFVWMISQ  147 (148)
T ss_dssp             HHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCC-HHHHHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred             HHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCcccc-HHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            88999999999999999999999999999998776 899999999999999999999999999875

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=99.93  E-value=3.1e-25  Score=202.21  Aligned_cols=145  Identities=34%  Similarity=0.585  Sum_probs=133.3

Q ss_pred             cCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhcc-CCc
Q 043828          379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKR-IGN  457 (586)
Q Consensus       379 ~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~~~  457 (586)
                      ..++++++++++++|..||.|++|.|+.+||..+|+.+|.+++..++..++..+|.|++|.|+|.||+.++..... ...
T Consensus         3 ~~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~   82 (176)
T 2lhi_A            3 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS   82 (176)
T ss_dssp             CCCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHH
T ss_pred             CcCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCc
Confidence            5678999999999999999999999999999999999999999999999999999999999999999986654333 334


Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      +++++.+|+.||+|++|+|+.+||+.+|..+|...+ +++++++++.+| |+||.|+|+||+++|...
T Consensus        83 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~-~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k~  148 (176)
T 2lhi_A           83 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLT-DAEVDDMLREVS-DGSGEINIQQFAALLSKG  148 (176)
T ss_dssp             HHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCC-HHHHHHHHHHHH-TTSSCBCTTHHHHHHTCC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccc-hHHHHHHHHhhc-CCCCeEeHHHHHHHHHhc
Confidence            678999999999999999999999999999988776 899999999999 999999999999999753

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=99.92  E-value=3.9e-25  Score=206.23  Aligned_cols=163  Identities=18%  Similarity=0.303  Sum_probs=148.7

Q ss_pred             CchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCC-----CCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccC
Q 043828          381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQ-----KVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRI  455 (586)
Q Consensus       381 l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~-----~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~  455 (586)
                      .+.++++++++ |..+|.|++|.|+.+||..+|+.+|.     .++.+++..+|+.+|.|++|.|+|+||+.++...   
T Consensus        27 ~~~~~~~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~---  102 (198)
T 1juo_A           27 FPGQTQDPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL---  102 (198)
T ss_dssp             CTTCCCCTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH---
T ss_pred             CCccccHHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH---
Confidence            44557788999 99999999999999999999999886     6789999999999999999999999999876543   


Q ss_pred             CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhh
Q 043828          456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQY  535 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~  535 (586)
                         +.++.+|+.+|.|++|+|+.+||..+|..+|...+ +++++.++..+  |+||.|+|+||+.++.....+..+|+.+
T Consensus       103 ---~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~-~~~~~~l~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~~~  176 (198)
T 1juo_A          103 ---NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLS-PQAVNSIAKRY--STNGKITFDDYIACCVKLRALTDSFRRR  176 (198)
T ss_dssp             ---HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCC-HHHHHHHHHHT--CSSSSEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ---HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCC-HHHHHHHHHHh--CCCCeEcHHHHHHHHHHHHHHHHHHHHh
Confidence               57999999999999999999999999999987766 88999999999  8999999999999999888999999999


Q ss_pred             hhhccCcccHHHHHHHHHh
Q 043828          536 SRAMMSALSIKLFKDKSME  554 (586)
Q Consensus       536 D~d~~G~i~~~el~~~~~~  554 (586)
                      |+|++|+|+.+ +.+++..
T Consensus       177 D~d~~G~is~~-~~~~l~~  194 (198)
T 1juo_A          177 DTAQQGVVNFP-YDDFIQC  194 (198)
T ss_dssp             CTTCCSEEEEE-HHHHHHH
T ss_pred             CCCCCCeEeec-HHHHHHH
Confidence            99999999998 7777643

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=99.92  E-value=9.4e-25  Score=197.70  Aligned_cols=154  Identities=20%  Similarity=0.298  Sum_probs=142.2

Q ss_pred             HhhhhccCCCCCCcCHHHHHHHHHhcCC-----CCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHH
Q 043828          391 QMFYMMDTDKNGDLTFEELKDGLNMIGQ-----KVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAF  465 (586)
Q Consensus       391 ~~F~~~D~~~~G~i~~~el~~~l~~~~~-----~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F  465 (586)
                      +.|..+|.|++|.|+.+||..++..+|.     .++.+++..+|+.+|.|++|.|+|+||+.++...      +.++.+|
T Consensus         5 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F   78 (167)
T 1gjy_A            5 YGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHF   78 (167)
T ss_dssp             HHHHHHHCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH------HHHHHHH
T ss_pred             HHHHHHHcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHH
Confidence            4599999999999999999999999987     6789999999999999999999999999876543      5799999


Q ss_pred             hhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhhhhhccCcccH
Q 043828          466 RFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSALSI  545 (586)
Q Consensus       466 ~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~  545 (586)
                      +.+|.|++|+|+.+||..+|..+|...+ ++++..++..+  |++|.|+|+||+.++.....++.+|+.+|+|++|+|+.
T Consensus        79 ~~~D~d~~G~i~~~el~~~l~~~g~~~~-~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~  155 (167)
T 1gjy_A           79 ISFDSDRSGTVDPQELQKALTTMGFRLN-PQTVNSIAKRY--STSGKITFDDYIACCVKLRALTDSFRRRDSAQQGMVNF  155 (167)
T ss_dssp             HHHCTTCCSEECHHHHHHHHHTTTCCCC-HHHHHHHHHHT--CBTTBEEHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEE
T ss_pred             HHhCCCCCCcCCHHHHHHHHHHcCCCCC-HHHHHHHHHHh--CcCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCeeEEe
Confidence            9999999999999999999999987766 88999999999  89999999999999998889999999999999999999


Q ss_pred             HHHHHHHHh
Q 043828          546 KLFKDKSME  554 (586)
Q Consensus       546 ~el~~~~~~  554 (586)
                      + +.+++..
T Consensus       156 ~-~~~~l~~  163 (167)
T 1gjy_A          156 S-YDDFIQC  163 (167)
T ss_dssp             E-HHHHHHH
T ss_pred             e-HHHHHHH
Confidence            9 8887754

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=99.92  E-value=7.8e-25  Score=197.83  Aligned_cols=154  Identities=19%  Similarity=0.277  Sum_probs=142.8

Q ss_pred             HhhhhccCCCCCCcCHHHHHHHHHhcCC-----CCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHH
Q 043828          391 QMFYMMDTDKNGDLTFEELKDGLNMIGQ-----KVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAF  465 (586)
Q Consensus       391 ~~F~~~D~~~~G~i~~~el~~~l~~~~~-----~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F  465 (586)
                      +.|..+|.|++|.|+.+||..+++.+|.     .++..++..+|+.+|.|++|.|+|+||+.++...      +.++.+|
T Consensus         3 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F   76 (165)
T 1k94_A            3 YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENF   76 (165)
T ss_dssp             HHHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHH
T ss_pred             HHHHHHhCCCCCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHH
Confidence            4699999999999999999999999987     6789999999999999999999999999876543      5799999


Q ss_pred             hhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhhhhhccCcccH
Q 043828          466 RFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSALSI  545 (586)
Q Consensus       466 ~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~  545 (586)
                      +.+|+|++|+|+.+||..+|..+|...+ ++++..++..+  |++|.|+|+||+.++.....+..+|+.+|+|++|+|+.
T Consensus        77 ~~~D~d~~G~i~~~el~~~l~~~g~~~~-~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~  153 (165)
T 1k94_A           77 MTVDQDGSGTVEHHELRQAIGLMGYRLS-PQTLTTIVKRY--SKNGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANF  153 (165)
T ss_dssp             HHHCTTCCSBCCHHHHHHHHHHTTCCCC-HHHHHHHHHHH--CBTTBCBHHHHHHHHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred             HHhCCCCCceECHHHHHHHHHHhCCCCC-HHHHHHHHHHh--CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEee
Confidence            9999999999999999999999987766 88999999999  89999999999999998889999999999999999999


Q ss_pred             HHHHHHHHh
Q 043828          546 KLFKDKSME  554 (586)
Q Consensus       546 ~el~~~~~~  554 (586)
                      + +++++..
T Consensus       154 ~-~~~~l~~  161 (165)
T 1k94_A          154 I-YDDFLQG  161 (165)
T ss_dssp             E-HHHHHHH
T ss_pred             e-HHHHHHH
Confidence            9 9998754

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=99.92  E-value=8.2e-25  Score=217.78  Aligned_cols=153  Identities=30%  Similarity=0.609  Sum_probs=136.3

Q ss_pred             hhhhhhcccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhh
Q 043828          371 KKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSV  450 (586)
Q Consensus       371 ~~~l~~~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  450 (586)
                      ...+.-...+++++|+++++++|+.||.|++|.|+.+||..+|+.+|..+++++++.+|+.+|.|++|.|+|+||+.++.
T Consensus       286 Tl~wePs~E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms  365 (440)
T 3u0k_A          286 TKGWEPTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMA  365 (440)
T ss_dssp             EEEECCBCBCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHH
T ss_pred             hhhhHhhHhhhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            33455567789999999999999999999999999999999999999999999999999999999999999999998664


Q ss_pred             h-hccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          451 H-LKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       451 ~-~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      . ......+++++++|+.||+|++|+|+.+||+.+|..+|...+ +++++++|+.+|.|+||.|+|+||+++|..
T Consensus       366 ~~lk~~d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LS-deEIdeLfke~D~DgDGkIsyeEFvkmMtS  439 (440)
T 3u0k_A          366 RKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT-DEEVDEMIREADIDGDGQVNYEEFVQMMTA  439 (440)
T ss_dssp             TC------CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCC-HHHHHHHHHHHCTTCSSSEEHHHHHHHHC-
T ss_pred             HHhcCCChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCcEeHHHHHHHhCC
Confidence            4 344456788999999999999999999999999999998776 899999999999999999999999999864

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=99.92  E-value=2.3e-24  Score=195.67  Aligned_cols=146  Identities=16%  Similarity=0.178  Sum_probs=131.2

Q ss_pred             ccCCCCCCcCHHHHHHHHHhc------CCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhc
Q 043828          396 MDTDKNGDLTFEELKDGLNMI------GQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFD  469 (586)
Q Consensus       396 ~D~~~~G~i~~~el~~~l~~~------~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D  469 (586)
                      =+.|++|+|+.+||+.+|+.+      |..++.++++.+|+.+|.|++|.|+|+||+.++...      ..++.+|+.||
T Consensus        13 ~~~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~l~~aF~~fD   86 (174)
T 2i7a_A           13 GLVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRL------VHYQHVFQKVQ   86 (174)
T ss_dssp             CSCC-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHH------HHHHHHHHHHC
T ss_pred             ccCCCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhc
Confidence            357899999999999999998      678899999999999999999999999999876543      46999999999


Q ss_pred             CCCCCcccHHHHHHHHHhc----CCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhhhhhccCcc--
Q 043828          470 KNQSGFIEVDELKEVLLED----NAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSAL--  543 (586)
Q Consensus       470 ~d~~G~i~~~el~~~l~~~----~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i--  543 (586)
                       |++|+|+.+||+.+|..+    |...+ +++++.++..+| |+||.|+|+||+.++...+.+..+|+.||+|++| |  
T Consensus        87 -d~~G~I~~~El~~~l~~l~~~~G~~~~-~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~~~~~~~F~~~D~d~~G-I~~  162 (174)
T 2i7a_A           87 -TSPGVLLSSDLWKAIENTDFLRGIFIS-RELLHLVTLRYS-DSVGRVSFPSLVCFLMRLEAMAKTFRNLSKDGKG-LYL  162 (174)
T ss_dssp             -SBTTBEEGGGHHHHHHTCGGGTTCCCC-HHHHHHHHHHHS-CTTSEECHHHHHHHHHHHHHHHHHHHHHCSSSSC-CCC
T ss_pred             -CCCCcCCHHHHHHHHHHhHhccCCCCC-HHHHHHHHHHHc-CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCC-cee
Confidence             999999999999999999    87766 889999999999 9999999999999999888999999999999999 6  


Q ss_pred             cHHHHHHH
Q 043828          544 SIKLFKDK  551 (586)
Q Consensus       544 ~~~el~~~  551 (586)
                      +.+|+..+
T Consensus       163 ~~~Ef~~~  170 (174)
T 2i7a_A          163 TEMEWMSL  170 (174)
T ss_dssp             CHHHHHHH
T ss_pred             cHHHHHHH
Confidence            66666554

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=99.91  E-value=1.9e-24  Score=190.35  Aligned_cols=140  Identities=25%  Similarity=0.503  Sum_probs=127.4

Q ss_pred             hhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhc-cCCchhHH
Q 043828          383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLK-RIGNDDIL  461 (586)
Q Consensus       383 ~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-~~~~~~~~  461 (586)
                      ++++.+++++|..||.|++|.|+.+||..+|+.+|.+++..++..++..+|.|++|.|+|+||+.++.... .....+.+
T Consensus         2 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l   81 (143)
T 2obh_A            2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEI   81 (143)
T ss_dssp             HHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHH
Confidence            46788999999999999999999999999999999999999999999999999999999999998654322 22335679


Q ss_pred             HHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          462 SQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       462 ~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      +.+|+.||+|++|+|+.+||+.++..+|...+ ++++..+|..+|.|+||.|+|+||+.++.
T Consensus        82 ~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~-~~~~~~~~~~~D~d~dG~I~~~eF~~~~~  142 (143)
T 2obh_A           82 LKAFKLFDDDETGKISFKNLKRVAKELGENLT-DEELQEMIDEADRDGDGEVSEQEFLRIMK  142 (143)
T ss_dssp             HHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCC-HHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            99999999999999999999999999987766 89999999999999999999999999875

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=99.91  E-value=2.7e-24  Score=192.48  Aligned_cols=143  Identities=21%  Similarity=0.389  Sum_probs=128.3

Q ss_pred             CCchhhHhHHHHhhhhccC--CCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhcc---
Q 043828          380 NLPQDQMAQIKQMFYMMDT--DKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKR---  454 (586)
Q Consensus       380 ~l~~~~~~~~~~~F~~~D~--~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~---  454 (586)
                      +++++|+++++++|..||.  |++|+|+..||..+|+.+|.+++..++..++. .|.+++|.|+|+||+.++.....   
T Consensus         2 qLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~~   80 (159)
T 3i5g_C            2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKDT   80 (159)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTCCT
T ss_pred             CCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhcccc
Confidence            5788999999999999996  89999999999999999999999999998865 57888999999999987654432   


Q ss_pred             CCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcC--CCCCceeHHHHHHHHhc
Q 043828          455 IGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDL--DRDGRISFEEFKAMMTS  524 (586)
Q Consensus       455 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~--~~dg~i~~~eF~~~~~~  524 (586)
                      ....++++++|+.||+|++|+|+.+||+.+|..+|...+ ++++..+++.+|.  |+||.|+|+||+++|..
T Consensus        81 ~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls-~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~  151 (159)
T 3i5g_C           81 GTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERIT-EDQCNDIFTFCDIREDIDGNIKYEDLMKKVMA  151 (159)
T ss_dssp             TCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCC-HHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCC-HHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHC
Confidence            345678999999999999999999999999999998776 9999999999985  88999999999998764

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.91  E-value=1.7e-24  Score=212.87  Aligned_cols=157  Identities=25%  Similarity=0.300  Sum_probs=121.2

Q ss_pred             eeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCCh---------------hcHHHHHHHHHHHHhCCCCCCeeEE
Q 043828           83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---------------IDIDDVRREVEIMRHLPKHPNIVTY  147 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~---------------~~~~~~~~Ei~~l~~l~~hpnIv~l  147 (586)
                      |.+++.||+|+||.||+|.+ .+|+.||+|++........               .....+.+|+.+|+++. |++++. 
T Consensus        92 ~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-~~~v~~-  168 (282)
T 1zar_A           92 DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-GLAVPK-  168 (282)
T ss_dssp             SEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-TSSSCC-
T ss_pred             EEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-CCCcCe-
Confidence            44559999999999999998 8899999999865322111               12456889999999994 555555 


Q ss_pred             EEEEEeCCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEe
Q 043828          148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI  227 (586)
Q Consensus       148 ~~~~~~~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~  227 (586)
                        ++.. +..|+|||||+|++|.+ +.      ......++.|++.||.|||++||+||||||+|||+   + ++.+||+
T Consensus       169 --~~~~-~~~~lvmE~~~g~~L~~-l~------~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl---~-~~~vkl~  234 (282)
T 1zar_A          169 --VYAW-EGNAVLMELIDAKELYR-VR------VENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV---S-EEGIWII  234 (282)
T ss_dssp             --EEEE-ETTEEEEECCCCEEGGG-CC------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE---E-TTEEEEC
T ss_pred             --EEec-cceEEEEEecCCCcHHH-cc------hhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEE---E-CCcEEEE
Confidence              4433 45699999999999987 32      12345799999999999999999999999999999   4 6799999


Q ss_pred             ecccccccCCCCceecccCCccccchhhhhc-----------cCCCcchHHH
Q 043828          228 DFGLSIFFKPGEQFCEIVGSPYYMAPEVLRR-----------NYGPEIDVWS  268 (586)
Q Consensus       228 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~~-----------~~~~~~Diws  268 (586)
                      |||+|..            +..++|||++.+           .|+..+|+|.
T Consensus       235 DFG~a~~------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~  274 (282)
T 1zar_A          235 DFPQSVE------------VGEEGWREILERDVRNIITYFSRTYRTEKDINS  274 (282)
T ss_dssp             CCTTCEE------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred             ECCCCeE------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence            9999864            446899998742           3566667665

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=99.91  E-value=1.3e-23  Score=186.07  Aligned_cols=145  Identities=30%  Similarity=0.617  Sum_probs=131.3

Q ss_pred             cCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh-ccCCc
Q 043828          379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL-KRIGN  457 (586)
Q Consensus       379 ~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-~~~~~  457 (586)
                      ..++++++.+++++|..+|.|++|.|+.+||..+|+.+|..++..++..+|..+|.|++|.|+|+||+.++... .....
T Consensus         2 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~   81 (148)
T 1exr_A            2 EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDS   81 (148)
T ss_dssp             CCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCc
Confidence            35678889999999999999999999999999999999999999999999999999999999999999866443 22334


Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      .+.++.+|+.||+|++|+|+.+||..+|..+|...+ ++++..++..+|.|+||.|+|+||+.+|..
T Consensus        82 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~-~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~  147 (148)
T 1exr_A           82 EEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLT-DDEVDEMIREADIDGDGHINYEEFVRMMVS  147 (148)
T ss_dssp             HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCC-HHHHHHHHHHHCSSSSSSBCHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCcEeHHHHHHHHcc
Confidence            567999999999999999999999999999987666 899999999999999999999999998864

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=99.90  E-value=2.9e-23  Score=184.44  Aligned_cols=141  Identities=26%  Similarity=0.480  Sum_probs=127.0

Q ss_pred             cCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh-ccCCc
Q 043828          379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL-KRIGN  457 (586)
Q Consensus       379 ~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-~~~~~  457 (586)
                      ..++++|+++++++|..||.|++|.|+.+||..+|+.+|..++..++..++.    +.+|.|+|.||+.++... .....
T Consensus         8 ~~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~----~~~~~i~f~ef~~~~~~~~~~~~~   83 (153)
T 3i5g_B            8 VKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLK----ECPGQLNFTAFLTLFGEKVSGTDP   83 (153)
T ss_dssp             TTCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHHH----TSSSCCCSHHHHHTTTTTTTTCCC
T ss_pred             cCCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHHH----hccCCccHHHHHHHHHhhhccccc
Confidence            3578999999999999999999999999999999999999999999888776    457889999999966544 34456


Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      ++.++.+|+.||+|++|+|+.+||+.+|..+|...+ +++++.|++.+|.| ||.|+|+||+.+|...
T Consensus        84 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls-~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~~  149 (153)
T 3i5g_B           84 EDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFS-KEEIKNVWKDAPLK-NKQFNYNKMVDIKGKA  149 (153)
T ss_dssp             HHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCC-HHHHHHHHTTCCEE-TTEECHHHHHHHHHCS
T ss_pred             HHHHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCC-HHHHHHHHHHhCCC-cCEEcHHHHHHHhcCC
Confidence            788999999999999999999999999999998776 89999999999988 9999999999999764

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=99.89  E-value=6.7e-23  Score=182.20  Aligned_cols=146  Identities=28%  Similarity=0.473  Sum_probs=132.5

Q ss_pred             cccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCC
Q 043828          377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIG  456 (586)
Q Consensus       377 ~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~  456 (586)
                      |...++++++++++++|..+|.|++|.|+.+||..++..+|..++..++..+|..+|.|++|.|+|+||+.++.......
T Consensus         1 m~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~   80 (153)
T 3ox6_A            1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAE   80 (153)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTC
T ss_pred             CcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhcc
Confidence            35678899999999999999999999999999999999999999999999999999999999999999998765443332


Q ss_pred             c-----hhHHHHHHhhhcCCCCCcccHHHHHHHHHh-cCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          457 N-----DDILSQAFRFFDKNQSGFIEVDELKEVLLE-DNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       457 ~-----~~~~~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      .     .+.++.+|+.+|.|++|+|+.+||..+|.. +|...+ ++++..++..+|.|++|.|+|+||+.++.
T Consensus        81 ~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~-~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  152 (153)
T 3ox6_A           81 TADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVG-HRDIEEIIRDVDLNGDGRVDFEEFVRMMS  152 (153)
T ss_dssp             CHHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCC-HHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred             ccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCC-HHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            2     567999999999999999999999999998 787766 88999999999999999999999999875

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=99.89  E-value=5.4e-24  Score=197.10  Aligned_cols=168  Identities=26%  Similarity=0.470  Sum_probs=151.9

Q ss_pred             CccccchhhhhhhhhhhhhhhhhcccCC-chhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhc-----------CCCCC
Q 043828          354 GNVTSRIKQFSIMNKFKKKVLRVVADNL-PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI-----------GQKVS  421 (586)
Q Consensus       354 ~~~~~~~~~~~~~~~l~~~~l~~~~~~l-~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~-----------~~~~~  421 (586)
                      ..++.++++|...+.+++.++..+...+ +.+++..++++|..+|.|++|.|+.+||..++..+           +..++
T Consensus         6 ~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~   85 (191)
T 3khe_A            6 TGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQI   85 (191)
T ss_dssp             HHHHHHHHHCCCCCHHHHHHHHHHHHHSSCTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhh
Confidence            4556788889999999999999998887 88999999999999999999999999999999987           66677


Q ss_pred             HHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHH
Q 043828          422 DPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDI  501 (586)
Q Consensus       422 ~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~  501 (586)
                      ..++..+|+.+|.|++|.|+|+||+.++.........+.++.+|+.+|.|++|+|+.+||..++.  +...+ ++++..+
T Consensus        86 ~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~~~~~-~~~~~~~  162 (191)
T 3khe_A           86 EAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG--VTEVD-DETWHQV  162 (191)
T ss_dssp             HHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT--SSCCC-HHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc--cCCCC-HHHHHHH
Confidence            88999999999999999999999999776665666778899999999999999999999999998  55555 8899999


Q ss_pred             HHHhcCCCCCceeHHHHHHHHhc
Q 043828          502 LRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       502 ~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      +..+|.|+||.|+|+||+.++..
T Consensus       163 ~~~~D~~~dg~i~~~eF~~~~~~  185 (191)
T 3khe_A          163 LQECDKNNDGEVDFEEFVEMMQK  185 (191)
T ss_dssp             HHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHH
Confidence            99999999999999999999864

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=99.89  E-value=6.7e-24  Score=241.36  Aligned_cols=189  Identities=17%  Similarity=0.197  Sum_probs=157.6

Q ss_pred             hHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCC--------CCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCC
Q 043828          385 QMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQ--------KVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIG  456 (586)
Q Consensus       385 ~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~--------~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~  456 (586)
                      +.++++++|..+| +++|.|+.+||..+|..++.        .++.++++.+|+.+|.|++|.|+|+||+.++...    
T Consensus       532 ~~~~l~~~F~~~D-~~dG~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~~----  606 (900)
T 1qxp_A          532 IDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRI----  606 (900)
T ss_dssp             ---------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHHH----
T ss_pred             HHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH----
Confidence            3789999999999 99999999999999998875        7899999999999999999999999999877554    


Q ss_pred             chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhhh
Q 043828          457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYS  536 (586)
Q Consensus       457 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D  536 (586)
                        +.++.+|+.||.|++|+|+.+||..+|..+|.... +++++.++..+| |++|.|+|+||+.++...+.+..+|+.+|
T Consensus       607 --~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~-~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~~~l~~~F~~~D  682 (900)
T 1qxp_A          607 --RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLP-CQLHQVIVARFA-DDELIIDFDNFVRCLVRLEILFKIFKQLD  682 (900)
T ss_dssp             --HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECC-HHHHHHHHHHTS-CSSSBCCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             --HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCC-HHHHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHHHHHhhC
Confidence              67999999999999999999999999999987766 889999999999 99999999999999987778888888888


Q ss_pred             hhccCcc----------------------------------------------------------cHHHHHHHHHhhc--
Q 043828          537 RAMMSAL----------------------------------------------------------SIKLFKDKSMELT--  556 (586)
Q Consensus       537 ~d~~G~i----------------------------------------------------------~~~el~~~~~~~g--  556 (586)
                      +|++|.|                                                          +.+||+.++..++  
T Consensus       683 ~d~~G~It~~~~efl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~G~Is~~El~~~L~~~~~~  762 (900)
T 1qxp_A          683 PENTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGDDMEVSATELMNILNKVVTR  762 (900)
T ss_dssp             SSCCSCEEEEHHHHHHHTCC--------------CCCCCC--------------CCCCTTCSSCBCHHHHTTTSCC----
T ss_pred             CCCCceEEecHHHHHHHhhhccccccccccccccccccCCCCCChHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHhccc
Confidence            8888766                                                          7788888887776  


Q ss_pred             ------ccCChhhHHHHHHhhccCCCceEecC
Q 043828          557 ------KSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       557 ------~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                            ..++.++++.|++.+|.|+||+|++.
T Consensus       763 ~~~~~~~~~s~~~~~~l~~~~D~d~dG~Is~~  794 (900)
T 1qxp_A          763 HPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFE  794 (900)
T ss_dssp             CCSCC--CCCHHHHHHHHHHHCCSSSSSBCSH
T ss_pred             ccccccCCCCHHHHHHHHHHHCCCCCCeECHH
Confidence                  36788999999999999999999874

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=99.89  E-value=2.8e-23  Score=190.42  Aligned_cols=165  Identities=25%  Similarity=0.474  Sum_probs=144.3

Q ss_pred             CccccchhhhhhhhhhhhhhhhhcccCCc--hhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHH
Q 043828          354 GNVTSRIKQFSIMNKFKKKVLRVVADNLP--QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEA  431 (586)
Q Consensus       354 ~~~~~~~~~~~~~~~l~~~~l~~~~~~l~--~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~  431 (586)
                      ..++.++++|...+++++.++..+...+.  ++++..++++|..+|.|++|.|+.+||..+|+.+|..  ..++..+|..
T Consensus         4 ~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~--~~~~~~~~~~   81 (180)
T 3mse_B            4 PNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVGIK--KWDINRILQA   81 (180)
T ss_dssp             HHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCC--HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC--HHHHHHHHHH
Confidence            45677899999999999999999998887  8899999999999999999999999999999998854  6889999999


Q ss_pred             hcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCC-
Q 043828          432 ADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRD-  510 (586)
Q Consensus       432 ~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~d-  510 (586)
                      +|.|++|.|+|+||+.++..... ...+.++.+|+.+|+|++|+|+.+||..++.  +...+ ++++..+|..+|.|+| 
T Consensus        82 ~D~d~~g~i~~~Ef~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~--~~~~~-~~~~~~~~~~~d~~~d~  157 (180)
T 3mse_B           82 LDINDRGNITYTEFMAGCYRWKN-IESTFLKAAFNKIDKDEDGYISKSDIVSLVH--DKVLD-NNDIDNFFLSVHSIKKG  157 (180)
T ss_dssp             HCTTCCSEECHHHHHHHHSCCTT-C--CHHHHHHHHHCTTCSSCBCHHHHHHHTT--TSSCC-HHHHHHHHHHHHTC---
T ss_pred             hCCCCCCcCcHHHHHHHHHhccc-CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHc--CCCCC-HHHHHHHHHHhhhccCc
Confidence            99999999999999987654433 2347899999999999999999999999998  44444 8899999999999988 


Q ss_pred             -------CceeHHHHHHHHhc
Q 043828          511 -------GRISFEEFKAMMTS  524 (586)
Q Consensus       511 -------g~i~~~eF~~~~~~  524 (586)
                             |.|+|+||+.+|..
T Consensus       158 ~~~~~~~G~i~~~eF~~~l~~  178 (180)
T 3mse_B          158 IPREHIINKISFQEFKDYMLS  178 (180)
T ss_dssp             ------CCCBCHHHHHHHHHT
T ss_pred             ccccccCCeeeHHHHHHHHHh
Confidence                   99999999998864

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=99.89  E-value=1.1e-22  Score=182.02  Aligned_cols=146  Identities=24%  Similarity=0.486  Sum_probs=133.0

Q ss_pred             cCCchhhHhHHHHhhhhcc-CCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccC--
Q 043828          379 DNLPQDQMAQIKQMFYMMD-TDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRI--  455 (586)
Q Consensus       379 ~~l~~~~~~~~~~~F~~~D-~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~--  455 (586)
                      ..++++++.+++++|..+| .|++|.|+.+||..+|+.+|..++..++..+|+.+|.|++|.|+|+||+.++......  
T Consensus         5 ~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~   84 (158)
T 2jnf_A            5 SKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEV   84 (158)
T ss_dssp             TTSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCC
T ss_pred             hhCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccc
Confidence            4567888999999999999 9999999999999999999999999999999999999999999999999876544322  


Q ss_pred             ---CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          456 ---GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       456 ---~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                         .....++.+|+.+|+|++|+|+.+||..++..+|...+ ++++..++..+|.|+||.|+|+||+.++...
T Consensus        85 ~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~-~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~  156 (158)
T 2jnf_A           85 NPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLS-SEDLDAMIDEIDADGSGTVDFEEFMGVMTGG  156 (158)
T ss_dssp             CTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCC-HHHHHHHHHHHCSSCCSEECSHHHHHHTSSC
T ss_pred             chhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCC-HHHHHHHHHHhCCCCCCcEeHHHHHHHHhcc
Confidence               45667999999999999999999999999999987766 8899999999999999999999999998753

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=99.89  E-value=2.2e-22  Score=180.60  Aligned_cols=146  Identities=27%  Similarity=0.479  Sum_probs=134.2

Q ss_pred             cccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh-ccC
Q 043828          377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL-KRI  455 (586)
Q Consensus       377 ~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-~~~  455 (586)
                      ....++++++.+++++|..+|.|++|.|+.+||..+++.+|..++..++..+|..+|.|++|.|+|+||+.++... ...
T Consensus        13 ~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~   92 (161)
T 3fwb_A           13 LNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKR   92 (161)
T ss_dssp             TTTTSCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTC
T ss_pred             CCCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcC
Confidence            3456788999999999999999999999999999999999999999999999999999999999999999866543 344


Q ss_pred             CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      ...+.++.+|+.+|.|++|+|+.+||..+|..+|...+ ++++..++..+|.|++|.|+|+||+.++.
T Consensus        93 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~-~~~~~~~~~~~d~~~~g~i~~~eF~~~~~  159 (161)
T 3fwb_A           93 DPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLT-DEELRAMIEEFDLDGDGEINENEFIAICT  159 (161)
T ss_dssp             CHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-HHHHHHHHHTTCSSSSSSEEHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            55778999999999999999999999999999998776 89999999999999999999999999886

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.89  E-value=9.2e-23  Score=179.08  Aligned_cols=139  Identities=29%  Similarity=0.510  Sum_probs=128.0

Q ss_pred             hhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh-hccCCchhHH
Q 043828          383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH-LKRIGNDDIL  461 (586)
Q Consensus       383 ~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~-~~~~~~~~~~  461 (586)
                      ++++.+++++|..+|.|++|.|+.+||..++..+|..++..++..+|+.+|.|++|.|+|+||+.++.. .......+.+
T Consensus         2 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~   81 (142)
T 2bl0_C            2 DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDIL   81 (142)
T ss_dssp             CHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHH
Confidence            567889999999999999999999999999999999999999999999999999999999999997654 3444567889


Q ss_pred             HHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          462 SQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       462 ~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      +.+|+.+|+|++|+|+.+||..++..+|...+ ++++..++..+| |++|.|+|+||+.++.
T Consensus        82 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~-~~~~~~~~~~~d-~~dg~i~~~eF~~~~~  141 (142)
T 2bl0_C           82 RQAFRTFDPEGTGYIPKAALQDALLNLGDRLK-PHEFAEFLGITE-TEKGQIRYDNFINTMF  141 (142)
T ss_dssp             HHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCC-HHHHHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred             HHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCC-HHHHHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence            99999999999999999999999999987766 889999999999 9999999999998764

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=99.89  E-value=1.1e-22  Score=182.70  Aligned_cols=149  Identities=29%  Similarity=0.569  Sum_probs=132.8

Q ss_pred             hhcccCCchhhHhHHHHhhhhccCCC-CCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhc
Q 043828          375 RVVADNLPQDQMAQIKQMFYMMDTDK-NGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLK  453 (586)
Q Consensus       375 ~~~~~~l~~~~~~~~~~~F~~~D~~~-~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~  453 (586)
                      ..+...++++++.+++++|..+|.|+ +|.|+.+||..++..+|..++..++..+|+.+|.|++|.|+|+||+.++....
T Consensus         6 ~~~~~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~   85 (161)
T 1dtl_A            6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSM   85 (161)
T ss_dssp             TTGGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred             HHHHhhCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHh
Confidence            34556678889999999999999999 99999999999999999999999999999999999999999999998765543


Q ss_pred             ----cCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          454 ----RIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       454 ----~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                          .....+.++.+|+.+|+|++|+|+.+||..++..+|...+ ++++..++..+|.|+||.|+|+||+.++..
T Consensus        86 ~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  159 (161)
T 1dtl_A           86 KDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETIT-EDDIEELMKDGDKNNDGRIDYDEFLEFMKG  159 (161)
T ss_dssp             C-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCC-HHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred             cccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence                3445678999999999999999999999999998887665 889999999999999999999999998864

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=99.89  E-value=1.4e-22  Score=185.54  Aligned_cols=147  Identities=33%  Similarity=0.643  Sum_probs=128.7

Q ss_pred             ccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh-ccCC
Q 043828          378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL-KRIG  456 (586)
Q Consensus       378 ~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-~~~~  456 (586)
                      +..++++++..++++|..+|.|++|.|+.+||..++..+|..++..++..+|+.+|.|++|.|+|+||+.++... ....
T Consensus         2 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~   81 (179)
T 2f2o_A            2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD   81 (179)
T ss_dssp             ----CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHH
T ss_pred             cccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcc
Confidence            345778889999999999999999999999999999999999999999999999999999999999999866543 2223


Q ss_pred             chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       457 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      ..+.++.+|+.+|.|++|+|+.+||..++..+|...+ ++++..+|..+|.|+||.|+|+||+.++...
T Consensus        82 ~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~-~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~  149 (179)
T 2f2o_A           82 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT-DEEVDEMIREADIDGDGQVNYEEFVQMMTAK  149 (179)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCC-HHHHHHHHHHHCTTCSSSEEHHHHHHHSCC-
T ss_pred             cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCC-HHHHHHHHHHcCCCCCCcCcHHHHHHHHHHc
Confidence            4567999999999999999999999999999987766 8899999999999999999999999998754

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=99.89  E-value=3.9e-23  Score=182.84  Aligned_cols=139  Identities=21%  Similarity=0.368  Sum_probs=125.2

Q ss_pred             hHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHh-cCCCCCcccHhHHHhhhhhh------ccCCc
Q 043828          385 QMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAA-DVDGNGLLSCDEFVTMSVHL------KRIGN  457 (586)
Q Consensus       385 ~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~-D~d~dg~i~~~eF~~~~~~~------~~~~~  457 (586)
                      ++++++++|..+|.|++|.|+.+||..+|..+|..++..++..+|..+ |.|++|.|+|+||+.++...      .....
T Consensus         2 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~   81 (148)
T 1m45_A            2 ATRANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAK   81 (148)
T ss_dssp             -CCCCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCC
T ss_pred             hHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhcccccccc
Confidence            456789999999999999999999999999999999999999999999 99999999999999977655      44566


Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      .+.++.+|+.+|+|++|+|+.+||..++..+|...+ ++++..++..+|.|+||.|+|+||+.++..
T Consensus        82 ~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~-~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~  147 (148)
T 1m45_A           82 TEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLT-DAEVDELLKGVEVDSNGEIDYKKFIEDVLR  147 (148)
T ss_dssp             THHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCC-HHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCC-HHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            788999999999999999999999999999987766 889999999999999999999999998864

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=99.89  E-value=3.3e-23  Score=187.12  Aligned_cols=160  Identities=47%  Similarity=0.806  Sum_probs=136.4

Q ss_pred             hhhhhhhhhhhhhhhcccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCccc
Q 043828          362 QFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLS  441 (586)
Q Consensus       362 ~~~~~~~l~~~~l~~~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~  441 (586)
                      +|...+.+++.++..+...++++++..++++|..+|.|++|.|+.+||..++..+|..++..++..+|..+|.|++|.|+
T Consensus         2 ~f~~~~~~~~~~~~~~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~   81 (166)
T 2aao_A            2 QFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTID   81 (166)
T ss_dssp             ----CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBC
T ss_pred             chhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEc
Confidence            46666778888888888899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHH
Q 043828          442 CDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAM  521 (586)
Q Consensus       442 ~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~  521 (586)
                      |+||+.++.........+.++.+|+.+|.|++|.|+.+||..++..+|.  + ++++..++..+|.|++|.|+|+||+.+
T Consensus        82 ~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~--~-~~~~~~~~~~~d~~~dg~i~~~eF~~~  158 (166)
T 2aao_A           82 YKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFGV--E-DVRIEELMRDVDQDNDGRIDYNEFVAM  158 (166)
T ss_dssp             HHHHHHHHTTCHHHHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC-----------CCHHHHHCTTCSSSBCHHHHHHH
T ss_pred             HHHHHHHHHHHhhcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCC--C-HHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence            9999987655444445678999999999999999999999999987763  3 677999999999999999999999999


Q ss_pred             Hhc
Q 043828          522 MTS  524 (586)
Q Consensus       522 ~~~  524 (586)
                      +..
T Consensus       159 ~~~  161 (166)
T 2aao_A          159 MQK  161 (166)
T ss_dssp             HC-
T ss_pred             HHh
Confidence            874

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=99.89  E-value=9.2e-24  Score=240.23  Aligned_cols=194  Identities=16%  Similarity=0.247  Sum_probs=144.1

Q ss_pred             HhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhcc-----------
Q 043828          386 MAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKR-----------  454 (586)
Q Consensus       386 ~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-----------  454 (586)
                      +..++.+|+.||.|++|+|+.+||..+|+.+|..++.++++.++..+| |++|.|+|+||+.++.....           
T Consensus       606 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~~~l~~~F~~~D~d  684 (900)
T 1qxp_A          606 IRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRLEILFKIFKQLDPE  684 (900)
T ss_dssp             HHHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHHHHHHHHHHHSCSS
T ss_pred             HHHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHHHHHhhCCC
Confidence            367899999999999999999999999999999999999999999999 99999999999876532100           


Q ss_pred             ------------------------------------------CCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCC--
Q 043828          455 ------------------------------------------IGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNA--  490 (586)
Q Consensus       455 ------------------------------------------~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~--  490 (586)
                                                                ....+.++++|+.+|.+ +|.|+.+||..+|..++.  
T Consensus       685 ~~G~It~~~~efl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~-~G~Is~~El~~~L~~~~~~~  763 (900)
T 1qxp_A          685 NTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGD-DMEVSATELMNILNKVVTRH  763 (900)
T ss_dssp             CCSCEEEEHHHHHHHTCC--------------CCCCCC--------------CCCCTTC-SSCBCHHHHTTTSCC----C
T ss_pred             CCceEEecHHHHHHHhhhccccccccccccccccccCCCCCChHHHHHHHHHHHHhcCC-CCccCHHHHHHHHHHhcccc
Confidence                                                      00123466777777776 788899999999887663  


Q ss_pred             -----CCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHH
Q 043828          491 -----GPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSM  565 (586)
Q Consensus       491 -----~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~  565 (586)
                           .....++++.+++.+|.|+||.|+|+||..++.....++.+|+.||+|++|+|+.+||+.++..+|..+++++++
T Consensus       764 ~~~~~~~~s~~~~~~l~~~~D~d~dG~Is~~EF~~l~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~~ls~~~~~  843 (900)
T 1qxp_A          764 PDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQGIYKRFETDRSGTIGSNELPGAFEAAGFHLNQHIYS  843 (900)
T ss_dssp             CSCC--CCCHHHHHHHHHHHCCSSSSSBCSHHHHHHHHHHHHHSSCC----CCSCC-------CCTTGGGTCCCCSCCCC
T ss_pred             cccccCCCCHHHHHHHHHHHCCCCCCeECHHHHHHHHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHhcCCCCCHHHHH
Confidence                 223478899999999999999999999999998878899999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCceEecC
Q 043828          566 ELKKSVELKKSGQLRIP  582 (586)
Q Consensus       566 ~~~~~~d~~~dg~i~~~  582 (586)
                      .|++.+| |+||+|++.
T Consensus       844 ~l~~~~d-d~dg~Is~~  859 (900)
T 1qxp_A          844 MIIRRYS-DETGNMDFD  859 (900)
T ss_dssp             ---------CCSCCCHH
T ss_pred             HHHHHhc-CCCCeECHH
Confidence            9999999 999998874

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=99.89  E-value=1.5e-22  Score=178.58  Aligned_cols=145  Identities=32%  Similarity=0.565  Sum_probs=130.6

Q ss_pred             cccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh-ccC
Q 043828          377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL-KRI  455 (586)
Q Consensus       377 ~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-~~~  455 (586)
                      |+..++++++..++++|..+|.|++|.|+.+||..++..+|..++..++..+|..+|.|++|.|+|+||+.++... ...
T Consensus         1 m~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~   80 (147)
T 4ds7_A            1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCN   80 (147)
T ss_dssp             ---CCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTH
T ss_pred             CCCcCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCC
Confidence            3567888999999999999999999999999999999999999999999999999999999999999999866543 223


Q ss_pred             CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      ...+.++.+|+.+|.|++|.|+.+||..++..+|...+ ++++..++..+| |++|.|+|+||+.++.
T Consensus        81 ~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~-~~~~~~~~~~~d-~~dg~i~~~eF~~~l~  146 (147)
T 4ds7_A           81 DSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLT-DAEVDEMLREVS-DGSGEINIKQFAALLS  146 (147)
T ss_dssp             HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-HHHHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred             CcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCC-HHHHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence            44578999999999999999999999999999987766 889999999999 9999999999999875

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=99.88  E-value=8.9e-23  Score=224.95  Aligned_cols=172  Identities=17%  Similarity=0.231  Sum_probs=158.6

Q ss_pred             CCchhh-HhHHHHhhhhccCCCCCCcCHHHHHHHHHhc--------CCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhh
Q 043828          380 NLPQDQ-MAQIKQMFYMMDTDKNGDLTFEELKDGLNMI--------GQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSV  450 (586)
Q Consensus       380 ~l~~~~-~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~--------~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  450 (586)
                      .+++++ .++++++|..+| |++|.|+.+||..+|..+        +..++.++++.+|..+|.|++|.|+|+||+.++.
T Consensus       524 ~ls~~e~~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~  602 (714)
T 3bow_A          524 EANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWT  602 (714)
T ss_dssp             CCSGGGCCHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHH
T ss_pred             CCChhhHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            366777 889999999999 999999999999999987        7889999999999999999999999999999776


Q ss_pred             hhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHH
Q 043828          451 HLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKM  530 (586)
Q Consensus       451 ~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~  530 (586)
                      ..      +.++.+|+.||+|++|+|+.+||..+|..+|.... +++++.++..+| |+||.|+|+||+.++...+.+..
T Consensus       603 ~~------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls-~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~~~~l~~  674 (714)
T 3bow_A          603 KI------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLP-CQLHQVIVARFA-DDELIIDFDNFVRCLVRLEILFK  674 (714)
T ss_dssp             HH------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECC-HHHHHHHHHHHS-CTTCEECHHHHHHHHHHHHHHHH
T ss_pred             HH------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCC-HHHHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHH
Confidence            54      67999999999999999999999999999987766 889999999999 99999999999999998889999


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHhhcccCC
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSMELTKSME  560 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~~g~~~~  560 (586)
                      +|+.||+|++|+|+.+|++.++..+...+.
T Consensus       675 ~F~~~D~d~dG~Is~~el~~l~~~~~~~~~  704 (714)
T 3bow_A          675 IFKQLDPENTGTIQLDLISWLSFSVLGKLA  704 (714)
T ss_dssp             HHSSSCSSCCSEEEEEHHHHHHHHHHCCCC
T ss_pred             HHHHhCCCCCCcEEHHHHHHHHHHHHHHHH
Confidence            999999999999999999998877765444

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=99.88  E-value=2.4e-22  Score=182.01  Aligned_cols=145  Identities=26%  Similarity=0.496  Sum_probs=131.4

Q ss_pred             cCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhc-cCCc
Q 043828          379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLK-RIGN  457 (586)
Q Consensus       379 ~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-~~~~  457 (586)
                      ..++++++.+++++|..+|.|++|.|+.+||..++..+|..++..++..+|..+|.|++|.|+|+||+.++.... ....
T Consensus        20 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~   99 (169)
T 3qrx_A           20 VGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDS   99 (169)
T ss_dssp             CCCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCc
Confidence            456788899999999999999999999999999999999999999999999999999999999999998665432 2234


Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      .+.++.+|+.+|+|++|+|+.+||..++..+|...+ ++++..++..+|.|+||.|+|+||+.++..
T Consensus       100 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~-~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  165 (169)
T 3qrx_A          100 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLT-EEELQEMIAEADRNDDNEIDEDEFIRIMKK  165 (169)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCC-HHHHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCC-HHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence            567999999999999999999999999999987666 889999999999999999999999999875

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=99.88  E-value=1.3e-22  Score=178.47  Aligned_cols=124  Identities=21%  Similarity=0.383  Sum_probs=116.1

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKM  530 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~  530 (586)
                      ..+++++|+.||+|++|+|+.+||..+|+.+|..++ +.++..++..+|.|++|.|+|+||+.++...       ..++.
T Consensus         5 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~-~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~   83 (143)
T 2obh_A            5 KQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPK-KEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILK   83 (143)
T ss_dssp             HHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCC-HHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCC-HHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHHHH
Confidence            356899999999999999999999999999998877 8899999999999999999999999987642       56889


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +|+.||+|++|+|+.+||+.++..+|..+++++++++|+.+|.|+||.|++.
T Consensus        84 ~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~  135 (143)
T 2obh_A           84 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQ  135 (143)
T ss_dssp             HHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHH
T ss_pred             HHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHH
Confidence            9999999999999999999999999999999999999999999999999874

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=99.88  E-value=1.8e-22  Score=183.94  Aligned_cols=124  Identities=22%  Similarity=0.381  Sum_probs=117.3

Q ss_pred             chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHH
Q 043828          457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWK  529 (586)
Q Consensus       457 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~  529 (586)
                      ..++++++|..||+|++|+|+.+||..+|+.+|..++ +.++..++..+|.|++|.|+|+||+.++...       +.++
T Consensus         9 qi~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~-~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~~~~l~   87 (176)
T 2lhi_A            9 QIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPS-EAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELL   87 (176)
T ss_dssp             GGGHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCC-HHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChh-HHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCcHHHHH
Confidence            3467999999999999999999999999999999987 8999999999999999999999999988654       5699


Q ss_pred             HHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          530 MASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       530 ~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      .+|+.||+|++|+|+.+||+.+|..+|..++++++++||+++| |+||+|+|.
T Consensus        88 ~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~  139 (176)
T 2lhi_A           88 EAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQ  139 (176)
T ss_dssp             HHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTT
T ss_pred             HHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHH
Confidence            9999999999999999999999999999999999999999999 999999986

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=99.87  E-value=3e-22  Score=178.90  Aligned_cols=143  Identities=24%  Similarity=0.404  Sum_probs=131.2

Q ss_pred             CCchhhHhHHHHhhhhccC--CCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhcc--C
Q 043828          380 NLPQDQMAQIKQMFYMMDT--DKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKR--I  455 (586)
Q Consensus       380 ~l~~~~~~~~~~~F~~~D~--~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~--~  455 (586)
                      .++++++.+++++|..+|.  |++|.|+.+||..+|..+|..++..++..+ ..+|.|++|.|+|+||+.++.....  .
T Consensus         2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~   80 (156)
T 1wdc_C            2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQ   80 (156)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCC
T ss_pred             CCCHHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccC
Confidence            3677889999999999999  999999999999999999999999999999 9999999999999999987765543  4


Q ss_pred             CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHH--hcCCCCCceeHHHHHHHHhc
Q 043828          456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRD--VDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~--~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ...+.++.+|+.+|.|++|+|+.+||..+|..+|...+ ++++..++..  +|.|++|.|+|+||+.++..
T Consensus        81 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~-~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  150 (156)
T 1wdc_C           81 GTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLS-DEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA  150 (156)
T ss_dssp             CCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCC-HHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCC-HHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhc
Confidence            56788999999999999999999999999999987766 8899999999  99999999999999998864

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=99.87  E-value=2.5e-22  Score=177.77  Aligned_cols=124  Identities=18%  Similarity=0.317  Sum_probs=116.9

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKM  530 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~  530 (586)
                      .++++++|+.||+|++|+|+.+||..+++.+|..+. +.++..++..+|.+++|.|+|.||+..+...       +.++.
T Consensus         9 i~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~-~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~   87 (148)
T 2lmt_A            9 IAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPT-EAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMRE   87 (148)
T ss_dssp             HHHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCC-HHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCch-HHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHH
Confidence            356899999999999999999999999999999887 8899999999999999999999999988643       66999


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +|+.||+|++|+|+.+||+.++..+|..+++++++.|++.+|.|+||+|++.
T Consensus        88 aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~  139 (148)
T 2lmt_A           88 AFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYE  139 (148)
T ss_dssp             HHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHH
T ss_pred             HHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHH
Confidence            9999999999999999999999999999999999999999999999999975

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=99.87  E-value=9.6e-22  Score=182.53  Aligned_cols=160  Identities=19%  Similarity=0.256  Sum_probs=131.0

Q ss_pred             hcccCCchhhHhHHHHhhhhccCCCCCCcCHHHHH-----HHHHhcCCCCCHH-----HHHHHHHHhcCCCCCcccHhHH
Q 043828          376 VVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELK-----DGLNMIGQKVSDP-----DVKMLMEAADVDGNGLLSCDEF  445 (586)
Q Consensus       376 ~~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~-----~~l~~~~~~~~~~-----~~~~~~~~~D~d~dg~i~~~eF  445 (586)
                      .+...++++++++++++|..+|.|++|.|+.+||.     .+++.+|..++..     ++..+|..+|.|++|.|+|+||
T Consensus         9 ~~~~~~s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF   88 (195)
T 1qv0_A            9 LKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQF   88 (195)
T ss_dssp             CSCCTTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHH
T ss_pred             cCcccCCHHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHH
Confidence            34455688999999999999999999999999999     6788889888776     6899999999999999999999


Q ss_pred             Hhhhhhhcc-------CCchhHHH----HHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCcee
Q 043828          446 VTMSVHLKR-------IGNDDILS----QAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRIS  514 (586)
Q Consensus       446 ~~~~~~~~~-------~~~~~~~~----~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~  514 (586)
                      +.++.....       ....+.++    .+|+.||+|++|+|+.+||..++..+|...+ ++++..+|..+|.|+||.|+
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~-~~~~~~~~~~~D~d~dg~i~  167 (195)
T 1qv0_A           89 LDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPS-QEDCEATFRHCDLDNAGDLD  167 (195)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCC-HHHHHHHHHHSCCCTTSCEE
T ss_pred             HHHHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCcCC
Confidence            986543321       12223344    9999999999999999999999999987766 88999999999999999999


Q ss_pred             HHHHHHHHhcchHHHHHHHhhhhhccCc
Q 043828          515 FEEFKAMMTSGADWKMASRQYSRAMMSA  542 (586)
Q Consensus       515 ~~eF~~~~~~~~~~~~~F~~~D~d~~G~  542 (586)
                      |+||+.++.      ..|...|.+..|.
T Consensus       168 ~~eF~~~~~------~~~~s~d~~~~g~  189 (195)
T 1qv0_A          168 VDEMTRQHL------GFWYTLDPEADGL  189 (195)
T ss_dssp             HHHHHHHHH------HHHTTCCGGGTTT
T ss_pred             HHHHHHHHH------HHccCCCccCccc
Confidence            999999875      3455567676663

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=99.87  E-value=1.9e-21  Score=171.99  Aligned_cols=141  Identities=19%  Similarity=0.401  Sum_probs=128.8

Q ss_pred             CchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHh---cCCCCCcccHhHHHhhhhhh---cc
Q 043828          381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAA---DVDGNGLLSCDEFVTMSVHL---KR  454 (586)
Q Consensus       381 l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~---D~d~dg~i~~~eF~~~~~~~---~~  454 (586)
                      ++++++.+++++|..+|.|++|.|+.+||..++..+|..++..++..+|+.+   |.|+ |.|+|+||+.++...   ..
T Consensus         2 l~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~   80 (149)
T 2mys_C            2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKD   80 (149)
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCC
Confidence            5678899999999999999999999999999999999999999999999999   9999 999999999876554   23


Q ss_pred             CCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          455 IGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       455 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ......++.+|+.+|+|++|+|+.+||..+|..+|...+ ++++..++.. |.|++|.|+|+||+.++..
T Consensus        81 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~-~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~  148 (149)
T 2mys_C           81 QGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMT-EEEVEELMKG-QEDSNGCINYEAFVKHIMS  148 (149)
T ss_pred             cchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCC-HHHHHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence            345678999999999999999999999999999987666 8899999999 9999999999999998863

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.87  E-value=1.5e-22  Score=186.84  Aligned_cols=143  Identities=38%  Similarity=0.771  Sum_probs=130.2

Q ss_pred             cCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCch
Q 043828          379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGND  458 (586)
Q Consensus       379 ~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~  458 (586)
                      ..++++++++++++|..+|.|++|.|+.+||..+|..+|..++..++..+|..+|.|++|.|+|+||+.++.........
T Consensus         2 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~   81 (188)
T 1s6i_A            2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLERE   81 (188)
T ss_dssp             CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCC
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHH
Confidence            45677888999999999999999999999999999999999999999999999999999999999999977655544556


Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      +.++.+|+.+|+|++|+|+.+||..+|..+|.  + ++++..+|..+|.|+||.|+|+||+.++..
T Consensus        82 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~--~-~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~  144 (188)
T 1s6i_A           82 ENLVSAFSYFDKDGSGYITLDEIQQACKDFGL--D-DIHIDDMIKEIDQDNDGQIDYGEFAAMMRK  144 (188)
T ss_dssp             CSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTC--C-TTHHHHHHHHHCSSSSSEEETTHHHHTTSC
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCC--C-HHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence            77999999999999999999999999998773  3 667999999999999999999999999874

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=99.87  E-value=5.7e-22  Score=178.09  Aligned_cols=147  Identities=34%  Similarity=0.644  Sum_probs=132.5

Q ss_pred             cccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhcc-C
Q 043828          377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKR-I  455 (586)
Q Consensus       377 ~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~  455 (586)
                      +...++++++.+++++|..+|.|++|.|+..||..++..+|..++.+++..+|+.+|.|++|.|+|+||+.++..... .
T Consensus        10 ~~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~   89 (162)
T 1top_A           10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKED   89 (162)
T ss_dssp             HHHHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHH
T ss_pred             hhhhcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccc
Confidence            445688899999999999999999999999999999999999999999999999999999999999999986644321 1


Q ss_pred             C---chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          456 G---NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       456 ~---~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      .   ..+.++.+|+.+|.|++|+|+.+||..++..+|...+ ++++..++..+|.|+||.|+|+||+.++..
T Consensus        90 ~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~-~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  160 (162)
T 1top_A           90 AKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVT-EEDIEDLMKDSDKNNDGRIDFDEFLKMMEG  160 (162)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCC-HHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred             cccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence            1   4567899999999999999999999999999887666 889999999999999999999999998864

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=99.87  E-value=7.4e-22  Score=173.47  Aligned_cols=139  Identities=27%  Similarity=0.510  Sum_probs=126.8

Q ss_pred             CchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh-ccCCchh
Q 043828          381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL-KRIGNDD  459 (586)
Q Consensus       381 l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-~~~~~~~  459 (586)
                      ++++++++++++|..+|.|++|.|+.+||..+|+.+|..++..++..++..    ++|.|+|+||+.++... ......+
T Consensus         1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~~~~   76 (143)
T 3j04_B            1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTDPED   76 (143)
T ss_dssp             CCHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSCCHH
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCCcHH
Confidence            457789999999999999999999999999999999999999999998876    89999999999976643 4445678


Q ss_pred             HHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          460 ILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       460 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      .++.+|+.+|+|++|+|+.+||..+|..+|...+ ++++..++..+|.|+||.|+|+||+.++..
T Consensus        77 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~-~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  140 (143)
T 3j04_B           77 VIRNAFACFDEEASGFIHEDHLRELLTTMGDRFT-DEEVDEMYREAPIDKKGNFNYVEFTRILKH  140 (143)
T ss_dssp             HHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSCCC-HHHHHHHHHHTTCCSSSCCCSTHHHHHHHS
T ss_pred             HHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCC-HHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence            8999999999999999999999999999987766 889999999999999999999999999875

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=99.87  E-value=1.4e-21  Score=180.71  Aligned_cols=156  Identities=18%  Similarity=0.248  Sum_probs=133.1

Q ss_pred             cCCchhhHhHHHHhhhhccCCCCCCcCHHHHH-----HHHHhcCCCCCHH-----HHHHHHHHhcCCCCCcccHhHHHhh
Q 043828          379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELK-----DGLNMIGQKVSDP-----DVKMLMEAADVDGNGLLSCDEFVTM  448 (586)
Q Consensus       379 ~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~-----~~l~~~~~~~~~~-----~~~~~~~~~D~d~dg~i~~~eF~~~  448 (586)
                      ...+++++++++++|..+|.|++|.|+.+||.     .+++.+|..++..     ++..+|+.+|.|++|.|+|+||+.+
T Consensus         8 ~~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~   87 (191)
T 1uhk_A            8 DFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEG   87 (191)
T ss_dssp             CTTCHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHH
Confidence            34467889999999999999999999999999     8899999888887     6899999999999999999999986


Q ss_pred             hhhhcc-------CCchhHHH----HHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHH
Q 043828          449 SVHLKR-------IGNDDILS----QAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEE  517 (586)
Q Consensus       449 ~~~~~~-------~~~~~~~~----~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~e  517 (586)
                      +.....       ....+.++    .+|+.+|+|++|+|+.+||..++..+|...+ .+++..++..+|.|+||.|+|+|
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~-~~~~~~~~~~~D~d~dG~i~~~e  166 (191)
T 1uhk_A           88 WKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQS-SEDCEETFRVCDIDESGQLDVDE  166 (191)
T ss_dssp             HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCS-HHHHHHHHHHSCCCTTSCEEHHH
T ss_pred             HHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCcCcHHH
Confidence            544321       12223344    9999999999999999999999999987766 88999999999999999999999


Q ss_pred             HHHHHhcchHHHHHHHhhhhhccC
Q 043828          518 FKAMMTSGADWKMASRQYSRAMMS  541 (586)
Q Consensus       518 F~~~~~~~~~~~~~F~~~D~d~~G  541 (586)
                      |+.++.      ..|...|.+..|
T Consensus       167 F~~~~~------~~~~s~d~~~~g  184 (191)
T 1uhk_A          167 MTRQHL------GFWYTMDPACEK  184 (191)
T ss_dssp             HHHHHH------HHHTTCCGGGTT
T ss_pred             HHHHHH------HHhcCCCCCCcc
Confidence            999876      345566777666

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=99.86  E-value=9.7e-22  Score=195.75  Aligned_cols=123  Identities=24%  Similarity=0.415  Sum_probs=116.9

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHHH
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKMA  531 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~~  531 (586)
                      ++++++|+.||+|++|+|+.+||..+|+.+|..++ +++++.+|..+|.|++|.|+|+||+.++...       +.++.+
T Consensus       302 ~ELREaF~~fDkDgdG~IS~eELk~aLrsLG~~~T-eeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreA  380 (440)
T 3u0k_A          302 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREA  380 (440)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-HHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC------CHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCC-HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHH
Confidence            46899999999999999999999999999999887 8999999999999999999999999988643       679999


Q ss_pred             HHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          532 SRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       532 F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      |+.||+|++|+|+.+||+.+|..+|..++++++++||+++|.|+||+|++.
T Consensus       381 Fk~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D~DgDGkIsye  431 (440)
T 3u0k_A          381 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE  431 (440)
T ss_dssp             HHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHH
T ss_pred             HHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHH
Confidence            999999999999999999999999999999999999999999999999975

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=99.86  E-value=3.9e-21  Score=173.51  Aligned_cols=141  Identities=18%  Similarity=0.393  Sum_probs=127.8

Q ss_pred             cCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCC-CCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh-ccCC
Q 043828          379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQ-KVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL-KRIG  456 (586)
Q Consensus       379 ~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~-~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-~~~~  456 (586)
                      ..++++++..++++|..+|.|++|.|+.+||..+|..+|. .++..++..++...    +|.|+|+||+.++... ....
T Consensus        17 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~~~   92 (166)
T 2mys_B           17 SMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGAD   92 (166)
T ss_pred             hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhccCC
Confidence            3677889999999999999999999999999999999999 99999999999875    7999999999876543 3334


Q ss_pred             chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       457 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ..+.++.+|+.||.|++|+|+.+||..+|..+|...+ ++++..+|..+|.|+||.|+|+||+.++..
T Consensus        93 ~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~-~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~  159 (166)
T 2mys_B           93 PEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFT-PEEIKNMWAAFPPDVAGNVDYKNICYVITH  159 (166)
T ss_pred             cHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCC-HHHHHHHHHhcCCCCCCeEeHHHHHHHHHh
Confidence            6778999999999999999999999999999887665 889999999999999999999999999875

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=99.86  E-value=2.9e-22  Score=179.18  Aligned_cols=122  Identities=11%  Similarity=0.195  Sum_probs=111.1

Q ss_pred             hHHHHHHhhhcC--CCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc---------hH
Q 043828          459 DILSQAFRFFDK--NQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG---------AD  527 (586)
Q Consensus       459 ~~~~~~F~~~D~--d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~---------~~  527 (586)
                      ++++++|..||.  |++|+|+..||..+|+.+|..++ +.++..++. .|.+++|.|+|+||+.++...         +.
T Consensus         9 ~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t-~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~~~~~~~~   86 (159)
T 3i5g_C            9 EEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPT-EAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKDTGTAADE   86 (159)
T ss_dssp             HHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCC-HHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTCCTTCCHHH
T ss_pred             HHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCC-HHHHHHHHc-ccccCCCcccHHHHHHHHHHhhcccccchHHH
Confidence            568999999995  89999999999999999999988 888888764 578889999999999987532         56


Q ss_pred             HHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhcc--CCCceEecC
Q 043828          528 WKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVEL--KKSGQLRIP  582 (586)
Q Consensus       528 ~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~--~~dg~i~~~  582 (586)
                      ++.+|+.||+|++|+|+.+||+++|..+|.++++++++.||+.+|.  |+||+|+|.
T Consensus        87 l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~  143 (159)
T 3i5g_C           87 FMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYE  143 (159)
T ss_dssp             HHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHH
T ss_pred             HHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHH
Confidence            9999999999999999999999999999999999999999999995  899999974

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=99.86  E-value=3.9e-21  Score=175.16  Aligned_cols=140  Identities=21%  Similarity=0.322  Sum_probs=125.5

Q ss_pred             chhhHhHHHHhhhhccCCCCCCcCHHHHHH----HHHhcCCCCCHHHHH-----------HHHHHhcCCCCCcccHhHHH
Q 043828          382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKD----GLNMIGQKVSDPDVK-----------MLMEAADVDGNGLLSCDEFV  446 (586)
Q Consensus       382 ~~~~~~~~~~~F~~~D~~~~G~i~~~el~~----~l~~~~~~~~~~~~~-----------~~~~~~D~d~dg~i~~~eF~  446 (586)
                      +++++++++++|..+|.|++|.|+.+||..    +++.+|..++..++.           .+|..+|.|++|.|+|+||+
T Consensus         2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~   81 (176)
T 1nya_A            2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFI   81 (176)
T ss_dssp             CSHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHH
T ss_pred             cHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence            567889999999999999999999999999    688889999998887           89999999999999999999


Q ss_pred             hhhhhhccCCc--------hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHH
Q 043828          447 TMSVHLKRIGN--------DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEF  518 (586)
Q Consensus       447 ~~~~~~~~~~~--------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF  518 (586)
                      .++........        ...++.+|+.+|.|++|+|+.+||..++..+|  . +++++..+|..+|.|+||.|+|+||
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g--~-~~~~~~~~~~~~D~d~dg~i~~~ef  158 (176)
T 1nya_A           82 RVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--M-SKAEAAEAFNQVDTNGNGELSLDEL  158 (176)
T ss_dssp             HHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--C-CHHHHHHHHHHHCTTCSSEEEHHHH
T ss_pred             HHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC--C-CHHHHHHHHHHhCCCCCCCCcHHHH
Confidence            87665443333        35689999999999999999999999999987  3 4889999999999999999999999


Q ss_pred             HHHHhc
Q 043828          519 KAMMTS  524 (586)
Q Consensus       519 ~~~~~~  524 (586)
                      +.++..
T Consensus       159 ~~~~~~  164 (176)
T 1nya_A          159 LTAVRD  164 (176)
T ss_dssp             HHHHSC
T ss_pred             HHHHHH
Confidence            999875

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=99.86  E-value=2e-22  Score=178.96  Aligned_cols=143  Identities=22%  Similarity=0.407  Sum_probs=120.7

Q ss_pred             CCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCC--CCCcccHhHHHhhhhhhcc---
Q 043828          380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVD--GNGLLSCDEFVTMSVHLKR---  454 (586)
Q Consensus       380 ~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d--~dg~i~~~eF~~~~~~~~~---  454 (586)
                      .++++++.+++++|..+|.|++|.|+.+||..+|..+|..++..++..+|..+|.|  ++|.|+|+||+.++.....   
T Consensus         3 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~   82 (151)
T 1w7j_B            3 EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRG   82 (151)
T ss_dssp             --------CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC---
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCC
Confidence            35677889999999999999999999999999999999999999999999999999  9999999999987655432   


Q ss_pred             CCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          455 IGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       455 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ....+.++.+|+.+|.|++|+|+.+||..++..+|...+ ++++..++..+| |+||.|+|+||+.++..
T Consensus        83 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~-~~~~~~~~~~~d-~~dg~i~~~eF~~~~~~  150 (151)
T 1w7j_B           83 QGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMT-EEEVETVLAGHE-DSNGCINYEAFLKHILS  150 (151)
T ss_dssp             -----CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCC-HHHHHHHHTTCC-CTTSEEEHHHHHHHTC-
T ss_pred             CCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCC-HHHHHHHHHhcc-CCCCeEeHHHHHHHHhc
Confidence            123456888999999999999999999999999987766 889999999999 99999999999998753

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=99.86  E-value=1.1e-21  Score=181.82  Aligned_cols=155  Identities=21%  Similarity=0.301  Sum_probs=112.8

Q ss_pred             HHHHhhhhccCC-CCCCcCHHHHHHHHHhcCCCC-CHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHH
Q 043828          388 QIKQMFYMMDTD-KNGDLTFEELKDGLNMIGQKV-SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAF  465 (586)
Q Consensus       388 ~~~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~-~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F  465 (586)
                      +++++|..||.+ ++|.|+.+||..++..++... ....+..+|..+|.|++|.|+|+||+.++.........+.++.+|
T Consensus        26 ~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f  105 (193)
T 1bjf_A           26 EIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAF  105 (193)
T ss_dssp             HHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCHHHHHHHHH
Confidence            456677788877 788899999988888877654 356688888888888889999999888776655555667788888


Q ss_pred             hhhcCCCCCcccHHHHHHHHHhc----CC--CCC-----CHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHh
Q 043828          466 RFFDKNQSGFIEVDELKEVLLED----NA--GPN-----GDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQ  534 (586)
Q Consensus       466 ~~~D~d~~G~i~~~el~~~l~~~----~~--~~~-----~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~  534 (586)
                      +.+|.|++|+|+.+||..++..+    |.  ..+     ....+..+|..+|.|+||.|+++||+.++...+.+..+| .
T Consensus       106 ~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~-~  184 (193)
T 1bjf_A          106 SMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRLL-Q  184 (193)
T ss_dssp             HHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHCTHHHHTT-C
T ss_pred             hhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHhcCHHHHHHh-c
Confidence            88888888999988888888653    31  111     134577888888888888888888888877666677777 7


Q ss_pred             hhhhccCcc
Q 043828          535 YSRAMMSAL  543 (586)
Q Consensus       535 ~D~d~~G~i  543 (586)
                      +|+|++|.|
T Consensus       185 ~D~~~dG~i  193 (193)
T 1bjf_A          185 CDPSSAGQF  193 (193)
T ss_dssp             C--------
T ss_pred             cCCCCCCCC
Confidence            777777764

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=99.86  E-value=3e-21  Score=178.94  Aligned_cols=171  Identities=22%  Similarity=0.245  Sum_probs=140.1

Q ss_pred             CCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCC-CCCcccHhHHHhhhhhhccC-CchhHHHHHHhhhcCCCCCcc
Q 043828          399 DKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVD-GNGLLSCDEFVTMSVHLKRI-GNDDILSQAFRFFDKNQSGFI  476 (586)
Q Consensus       399 ~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d-~dg~i~~~eF~~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~i  476 (586)
                      +..+.|+..+|..+....  .++.+++..+|..+|.+ ++|.|+++||..++...... .....++.+|+.+|.|++|.|
T Consensus         3 ~~~s~l~~~~l~~l~~~~--~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i   80 (193)
T 1bjf_A            3 KQNSKLRPEVMQDLLEST--DFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTI   80 (193)
T ss_dssp             --CCCCCHHHHHHHHHHS--SCCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEE
T ss_pred             cccccCCHHHHHHHHHHc--CCCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcC
Confidence            456789999999977664  57899999999999998 89999999999987665432 345678999999999999999


Q ss_pred             cHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc------------------hHHHHHHHhhhhh
Q 043828          477 EVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG------------------ADWKMASRQYSRA  538 (586)
Q Consensus       477 ~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------------------~~~~~~F~~~D~d  538 (586)
                      +..||..++..++.... .+++..+|..+|.|++|.|+++||..++...                  ..+..+|+.+|+|
T Consensus        81 ~~~Ef~~~~~~~~~~~~-~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d  159 (193)
T 1bjf_A           81 DFREFIIALSVTSRGKL-EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTN  159 (193)
T ss_dssp             EHHHHHHHHHHHTSSCH-HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTT
T ss_pred             cHHHHHHHHHHHcCCCH-HHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCC
Confidence            99999999998876655 7889999999999999999999999988531                  2388999999999


Q ss_pred             ccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceE
Q 043828          539 MMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQL  579 (586)
Q Consensus       539 ~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i  579 (586)
                      ++|+|+.+||..++.      +.+++..++ .+|+|+||+|
T Consensus       160 ~dG~I~~~Ef~~~~~------~~~~~~~~~-~~D~~~dG~i  193 (193)
T 1bjf_A          160 RDGKLSLEEFIRGAK------SDPSIVRLL-QCDPSSAGQF  193 (193)
T ss_dssp             CSSEECHHHHHHHHH------HCTHHHHTT-CC--------
T ss_pred             CCCeEeHHHHHHHHh------cCHHHHHHh-ccCCCCCCCC
Confidence            999999999999985      456899999 9999999986

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=99.86  E-value=3.6e-21  Score=180.61  Aligned_cols=176  Identities=18%  Similarity=0.202  Sum_probs=136.2

Q ss_pred             ccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCC-CCCcccHhHHHhhhhhhccC-CchhHHHHHHhhhcCCCC
Q 043828          396 MDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVD-GNGLLSCDEFVTMSVHLKRI-GNDDILSQAFRFFDKNQS  473 (586)
Q Consensus       396 ~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d-~dg~i~~~eF~~~~~~~~~~-~~~~~~~~~F~~~D~d~~  473 (586)
                      ++.+++|.|+.+||..+++.++  ++.+++..+|..+|.+ ++|.|+++||..++...... .....+..+|+.+|.|++
T Consensus         8 mg~~~~g~l~~~el~~~~~~~~--~~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~   85 (207)
T 2d8n_A            8 MGNSKSGALSKEILEELQLNTK--FSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLD   85 (207)
T ss_dssp             CTTCCTTCCCHHHHHHHHHHSS--CCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCC
T ss_pred             hccccCCCCCHHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCC
Confidence            6778888888888888888776  5788888888888888 68888888888876655332 456678888888888888


Q ss_pred             CcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc--------------------hHHHHHHH
Q 043828          474 GFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG--------------------ADWKMASR  533 (586)
Q Consensus       474 G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~--------------------~~~~~~F~  533 (586)
                      |.|+.+||..++..++.... .+++..+|..+|.|++|.|+++||..++...                    +.+..+|+
T Consensus        86 G~i~~~Ef~~~~~~~~~~~~-~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~  164 (207)
T 2d8n_A           86 GTLDFKEYVIALHMTTAGKT-NQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWK  164 (207)
T ss_dssp             SEEEHHHHHHHHHHHSCSSS-STTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHH
T ss_pred             CeEeHHHHHHHHHHHcCCCH-HHHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHH
Confidence            88888888888887765544 5668888888888888888888888877542                    34778888


Q ss_pred             hhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEe
Q 043828          534 QYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLR  580 (586)
Q Consensus       534 ~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~  580 (586)
                      .+|.|++|.|+.+||..++..      .+.+..++..+|....++++
T Consensus       165 ~~D~d~dG~I~~~Ef~~~~~~------~~~~~~~~~~~~~~~~~~~~  205 (207)
T 2d8n_A          165 YFGKNDDDKLTEKEFIEGTLA------NKEILRLIQFEPQKVKEKMK  205 (207)
T ss_dssp             HTTCCTTCCEEHHHHHHHHHH------CHHHHHHHSCCCSSCCCCC-
T ss_pred             HcCCCCCCcCcHHHHHHHHHh------ChHHHHHHhhhhHHHHHHhc
Confidence            888888888888888888753      34567777777766655543

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=99.85  E-value=3.5e-21  Score=170.30  Aligned_cols=123  Identities=22%  Similarity=0.403  Sum_probs=115.4

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHHH
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKMA  531 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~~  531 (586)
                      .+++.+|..||.|++|.|+.+||..+|+.+|..++ ..++..++..+|.|++|.|+|+||+.++...       ..++.+
T Consensus        10 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~-~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~   88 (148)
T 1exr_A           10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEA   88 (148)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCC-HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCC-HHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcHHHHHHH
Confidence            46889999999999999999999999999998877 8889999999999999999999999988643       568899


Q ss_pred             HHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          532 SRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       532 F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      |+.||+|++|+|+.+||+.++..+|..+++++++.+++.+|.|+||.|++.
T Consensus        89 F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~  139 (148)
T 1exr_A           89 FKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYE  139 (148)
T ss_dssp             HHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHH
T ss_pred             HHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHH
Confidence            999999999999999999999999999999999999999999999999874

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=99.85  E-value=1e-20  Score=168.83  Aligned_cols=143  Identities=21%  Similarity=0.469  Sum_probs=126.2

Q ss_pred             cccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh-ccC
Q 043828          377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL-KRI  455 (586)
Q Consensus       377 ~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-~~~  455 (586)
                      +...++++++..++++|..+|.|++|.|+.+||..+|..+|..++..++..++.    +++|.|+|+||+.++... ...
T Consensus         8 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~   83 (156)
T 1wdc_B            8 VLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGT   83 (156)
T ss_dssp             ----CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSC
T ss_pred             hhccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcCC
Confidence            345677889999999999999999999999999999999999999999999986    578999999999876543 344


Q ss_pred             CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      ...+.++.+|+.||+|++|+|+.+||..+|..+|...+ ++++..++..+|.| ||.|+|+||+.++...
T Consensus        84 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~-~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~~  151 (156)
T 1wdc_B           84 DSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFN-KDEMRMTFKEAPVE-GGKFDYVKFTAMIKGS  151 (156)
T ss_dssp             CCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCC-HHHHHHHHHHCCEE-TTEECHHHHHHHHHTS
T ss_pred             ChHHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCC-HHHHHHHHHhcCCC-CCEEeHHHHHHHHhcC
Confidence            56788999999999999999999999999999987665 89999999999999 9999999999998753

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.85  E-value=4.7e-21  Score=168.63  Aligned_cols=132  Identities=23%  Similarity=0.447  Sum_probs=121.2

Q ss_pred             HHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh--ccCCchhHHHHHHh
Q 043828          389 IKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL--KRIGNDDILSQAFR  466 (586)
Q Consensus       389 ~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~--~~~~~~~~~~~~F~  466 (586)
                      ++++|..+|.|++|.|+.+||..+|+.+|..++..++..+|..   |++|.|+|+||+.++...  ........++.+|+
T Consensus         7 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~   83 (145)
T 2bl0_B            7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKEMLDAFR   83 (145)
T ss_dssp             HHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHHHHHHHH
T ss_pred             HHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHHHHHHHH
Confidence            9999999999999999999999999999999999999999998   889999999999977554  33445678999999


Q ss_pred             hhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          467 FFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       467 ~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      .+|+|++|+|+.+||..+|..+|...+ ++++..++..+|.|+||.|+|+||+.++..
T Consensus        84 ~~D~d~~G~i~~~e~~~~l~~~g~~~~-~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  140 (145)
T 2bl0_B           84 ALDKEGNGTIQEAELRQLLLNLGDALT-SSEVEELMKEVSVSGDGAINYESFVDMLVT  140 (145)
T ss_dssp             HHCSSSSSEEEHHHHHHHHHHSSSCCC-HHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred             HhCCCCCCeEcHHHHHHHHHHcCCCCC-HHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence            999999999999999999999987766 899999999999999999999999998863

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=99.85  E-value=9.1e-21  Score=175.36  Aligned_cols=143  Identities=14%  Similarity=0.179  Sum_probs=126.7

Q ss_pred             ccCCchhhHhHHHHhhhhc-cCCCCCCcCHHHHHHHHHhc----CCCCCHHHHHHHH-----------HHhcCCCCCccc
Q 043828          378 ADNLPQDQMAQIKQMFYMM-DTDKNGDLTFEELKDGLNMI----GQKVSDPDVKMLM-----------EAADVDGNGLLS  441 (586)
Q Consensus       378 ~~~l~~~~~~~~~~~F~~~-D~~~~G~i~~~el~~~l~~~----~~~~~~~~~~~~~-----------~~~D~d~dg~i~  441 (586)
                      +..++.++.++++++|..+ |.|++|.|+.+||..++..+    |..++..++..++           ..+|.|++|.|+
T Consensus         3 ~~~ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~   82 (191)
T 2ccm_A            3 AHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVT   82 (191)
T ss_dssp             CCCCCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEE
T ss_pred             hhhccHHHHHHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeEC
Confidence            3456778889999999999 99999999999999999998    9899999999998           999999999999


Q ss_pred             HhHHHhhhhhhcc---------CCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCc
Q 043828          442 CDEFVTMSVHLKR---------IGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGR  512 (586)
Q Consensus       442 ~~eF~~~~~~~~~---------~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~  512 (586)
                      ++||+.++.....         ......++.+|+.+|+|++|+|+.+||..++..+|  . +++++..+|..+|.|+||.
T Consensus        83 ~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g--~-~~~~~~~~~~~~D~d~dG~  159 (191)
T 2ccm_A           83 KEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG--I-PKSDCDAAFDTLSDGGKTM  159 (191)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT--C-CHHHHHHHHHHHTTTTTSC
T ss_pred             HHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC--C-CHHHHHHHHHHhCCCCCCC
Confidence            9999986654321         12245789999999999999999999999999887  3 3888999999999999999


Q ss_pred             eeHHHHHHHHh
Q 043828          513 ISFEEFKAMMT  523 (586)
Q Consensus       513 i~~~eF~~~~~  523 (586)
                      |+|+||+.++.
T Consensus       160 i~~~Ef~~~~~  170 (191)
T 2ccm_A          160 VTREIFARLWT  170 (191)
T ss_dssp             CBHHHHHHHHH
T ss_pred             cCHHHHHHHHH
Confidence            99999999876

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=99.85  E-value=7.7e-21  Score=176.64  Aligned_cols=144  Identities=19%  Similarity=0.379  Sum_probs=130.2

Q ss_pred             hcccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh-cc
Q 043828          376 VVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL-KR  454 (586)
Q Consensus       376 ~~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-~~  454 (586)
                      .....++.+++..++++|..||.|++|.|+..||..+|..+|..++..++..++..+    +|.|+|+||+.++... ..
T Consensus        46 ~~~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~  121 (196)
T 3dtp_E           46 NVFAMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAG  121 (196)
T ss_dssp             CSSCSSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCS
T ss_pred             hhhhhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcC
Confidence            344567888999999999999999999999999999999999999999999999987    8999999999976543 34


Q ss_pred             CCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          455 IGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       455 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      ....+.+..+|+.||.|++|+|+.+||..+| .+|...+ .+++..+|..+|.|+||.|+|+||+.+|...
T Consensus       122 ~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~-~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~  190 (196)
T 3dtp_E          122 TDEEDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFS-QDEVDQALSEAPIDGNGLIDIKKFAQILTKG  190 (196)
T ss_dssp             SCCHHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCC-HHHHHHHHHSSCEETTEECHHHHHHHHHSSC
T ss_pred             CCcHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCC-HHHHHHHHHHcCCCCCCEEeHHHHHHHHHcC
Confidence            4567889999999999999999999999999 9987766 8899999999999999999999999998753

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=99.85  E-value=1.7e-20  Score=172.20  Aligned_cols=156  Identities=17%  Similarity=0.258  Sum_probs=133.6

Q ss_pred             CCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCC-CCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCch
Q 043828          380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQK-VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGND  458 (586)
Q Consensus       380 ~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~  458 (586)
                      .++.+++..+.+.|..+  |++|.|+.+||..++..++.. .+..++..+|+.+|.|++|.|+++||+.++.........
T Consensus        14 ~~s~~~i~~l~~~fd~~--d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~   91 (183)
T 1s6c_A           14 NFTKRELQVLYRGFKNE--XPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVH   91 (183)
T ss_dssp             SCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHH
T ss_pred             CCCHHHHHHHHHHHHHh--CCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcCCCHH
Confidence            45666666666666654  789999999999999998765 788999999999999999999999999987766556677


Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhc----CCC----CC---CHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchH
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLED----NAG----PN---GDQTIRDILRDVDLDRDGRISFEEFKAMMTSGAD  527 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~----~~~----~~---~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~  527 (586)
                      +.++.+|+.+|.|++|+|+.+||..++..+    |..    ..   ..+++..+|..+|.|+||.|+|+||+.++...+.
T Consensus        92 ~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~~~~  171 (183)
T 1s6c_A           92 EKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQEDDN  171 (183)
T ss_dssp             HHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSCCH
T ss_pred             HHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHhcChH
Confidence            889999999999999999999999999876    532    11   1478999999999999999999999999998889


Q ss_pred             HHHHHHhhhh
Q 043828          528 WKMASRQYSR  537 (586)
Q Consensus       528 ~~~~F~~~D~  537 (586)
                      +...|..||.
T Consensus       172 ~~~~l~~~d~  181 (183)
T 1s6c_A          172 IMRSLQLFQN  181 (183)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHhhc
Confidence            9999999884

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=99.84  E-value=6.4e-21  Score=178.15  Aligned_cols=141  Identities=22%  Similarity=0.337  Sum_probs=125.1

Q ss_pred             CCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhc------
Q 043828          380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLK------  453 (586)
Q Consensus       380 ~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~------  453 (586)
                      .++.+++++++++|..+|.|++|.|+.+||..+ ..+|..++   +..+|..+|.|++|.|+|+||+.++....      
T Consensus        22 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~   97 (202)
T 2bec_A           22 GFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDED   97 (202)
T ss_dssp             CCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhc
Confidence            467888999999999999999999999999999 77776665   99999999999999999999999765544      


Q ss_pred             -----------cCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhc-CCCCCCHHHHHHHHHH----hcCCCCCceeHHH
Q 043828          454 -----------RIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLED-NAGPNGDQTIRDILRD----VDLDRDGRISFEE  517 (586)
Q Consensus       454 -----------~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-~~~~~~~~~~~~~~~~----~d~~~dg~i~~~e  517 (586)
                                 .....+.++.+|+.||.|++|+|+.+||..++..+ |...+ ++++..++..    +|.|+||.|+|+|
T Consensus        98 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~-~~~~~~~~~~~~~~~D~d~dG~Is~~E  176 (202)
T 2bec_A           98 TETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVT-EEQLENIADRTVQEADEDGDGAVSFVE  176 (202)
T ss_dssp             HC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCC-HHHHHHHHHHHHHHHCSSCSSSEEHHH
T ss_pred             ccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCC-HHHHHHHHHHHHHHcCCCCCCcCcHHH
Confidence                       23446789999999999999999999999999998 76665 8889888888    9999999999999


Q ss_pred             HHHHHhcc
Q 043828          518 FKAMMTSG  525 (586)
Q Consensus       518 F~~~~~~~  525 (586)
                      |+.++...
T Consensus       177 F~~~~~~~  184 (202)
T 2bec_A          177 FTKSLEKM  184 (202)
T ss_dssp             HHHTTTTS
T ss_pred             HHHHHHHh
Confidence            99988753

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=99.84  E-value=1.4e-20  Score=176.01  Aligned_cols=152  Identities=19%  Similarity=0.257  Sum_probs=133.7

Q ss_pred             hhhHhHHHHhhhhccCC-CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHH
Q 043828          383 QDQMAQIKQMFYMMDTD-KNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDIL  461 (586)
Q Consensus       383 ~~~~~~~~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~  461 (586)
                      .-+.++++++|..||.+ ++|.|+.+||..++..+|...+.++++.+|+.+|.|++|.|+|+||+.++.........+.+
T Consensus        18 ~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~   97 (204)
T 1jba_A           18 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKL   97 (204)
T ss_dssp             HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHH
T ss_pred             CCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHH
Confidence            34567889999999999 89999999999999999998899999999999999999999999999988776666678889


Q ss_pred             HHHHhhhcCCCCCcccHHHHHHHHHhc----C------------CCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          462 SQAFRFFDKNQSGFIEVDELKEVLLED----N------------AGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       462 ~~~F~~~D~d~~G~i~~~el~~~l~~~----~------------~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      +.+|+.+|.|++|+|+.+||..++..+    |            .....++++..+|..+|.|+||.|+|+||+.++...
T Consensus        98 ~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~  177 (204)
T 1jba_A           98 KWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRD  177 (204)
T ss_dssp             HHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTTT
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHcC
Confidence            999999999999999999999999876    3            111336789999999999999999999999999877


Q ss_pred             hHHHHHHHh
Q 043828          526 ADWKMASRQ  534 (586)
Q Consensus       526 ~~~~~~F~~  534 (586)
                      +.+...+..
T Consensus       178 ~~~~~~~~~  186 (204)
T 1jba_A          178 KWVMKMLQM  186 (204)
T ss_dssp             TTHHHHHHS
T ss_pred             hHHHHHHHh
Confidence            777666653

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=99.84  E-value=5.8e-21  Score=178.63  Aligned_cols=142  Identities=21%  Similarity=0.430  Sum_probs=120.1

Q ss_pred             chhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHH
Q 043828          382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDIL  461 (586)
Q Consensus       382 ~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~  461 (586)
                      ...++..++++|..+|.|++|.|+.+||..+|..+|..++..++..+|+.+|.|++|.|+|+||+.++.........+.+
T Consensus        32 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~  111 (204)
T 3e3r_A           32 GASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVI  111 (204)
T ss_dssp             --------CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHH
T ss_pred             CchhHHHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHH
Confidence            45677899999999999999999999999999999999999999999999999999999999999977654444456789


Q ss_pred             HHHHhhhcCCCCCcccHHHHHHHHHhc-------CCCCCCHHHHHHHHHHhcC-CCCCceeHHHHHHHHhc
Q 043828          462 SQAFRFFDKNQSGFIEVDELKEVLLED-------NAGPNGDQTIRDILRDVDL-DRDGRISFEEFKAMMTS  524 (586)
Q Consensus       462 ~~~F~~~D~d~~G~i~~~el~~~l~~~-------~~~~~~~~~~~~~~~~~d~-~~dg~i~~~eF~~~~~~  524 (586)
                      +.+|+.+|.|++|+|+.+||..++..+       |... .++++..+|..+|. |+||.|+|+||+.++..
T Consensus       112 ~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~  181 (204)
T 3e3r_A          112 AAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWT-EDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSG  181 (204)
T ss_dssp             HHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSC-HHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHH
T ss_pred             HHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCC-hHHHHHHHHHHhhccCCCCcCcHHHHHHHHHH
Confidence            999999999999999999999999743       3333 36779999999998 99999999999998874

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=99.84  E-value=5e-21  Score=179.74  Aligned_cols=144  Identities=16%  Similarity=0.284  Sum_probs=120.4

Q ss_pred             ccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCC--CCCHHHHHHHH-------HHhcCCCCCcccHhHHHhh
Q 043828          378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQ--KVSDPDVKMLM-------EAADVDGNGLLSCDEFVTM  448 (586)
Q Consensus       378 ~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~--~~~~~~~~~~~-------~~~D~d~dg~i~~~eF~~~  448 (586)
                      ...++++++.+++++|..+|.|++|.|+.+||..++..+|.  .++.+++..++       +.+|.|++|.|+|+||+.+
T Consensus        27 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~  106 (208)
T 2hpk_A           27 VEDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEA  106 (208)
T ss_dssp             ---------CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHH
T ss_pred             HHHcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHH
Confidence            36677888999999999999999999999999999999987  89999999999       9999999999999999987


Q ss_pred             hh---------hhc-cCCchhH-HHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHH
Q 043828          449 SV---------HLK-RIGNDDI-LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEE  517 (586)
Q Consensus       449 ~~---------~~~-~~~~~~~-~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~e  517 (586)
                      +.         ... .....+. ++.+|+.+|+|++|+|+.+||..++..+|  .+ ++++..+|..+|.|+||.|+|+|
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g--~~-~~~~~~~~~~~D~d~dG~I~~~E  183 (208)
T 2hpk_A          107 NRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD--VP-QEAAYTFFEKADTDKSGKLERTE  183 (208)
T ss_dssp             HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT--SC-TTHHHHHHHHHCTTCCSSBCHHH
T ss_pred             HHHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--cC-HHHHHHHHHHhCCCCCCcCcHHH
Confidence            64         222 2222334 79999999999999999999999999988  33 67899999999999999999999


Q ss_pred             HHHHHhc
Q 043828          518 FKAMMTS  524 (586)
Q Consensus       518 F~~~~~~  524 (586)
                      |+.++..
T Consensus       184 F~~~~~~  190 (208)
T 2hpk_A          184 LVHLFRK  190 (208)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998863

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=99.84  E-value=5.4e-21  Score=169.72  Aligned_cols=119  Identities=18%  Similarity=0.334  Sum_probs=108.5

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKM  530 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~  530 (586)
                      .++++++|+.||+|++|+|+.+||..+|+.+|..++ +.++..++.    +++|.|+|+||+.++...       +.++.
T Consensus        15 i~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~-~~~~~~~~~----~~~~~i~f~ef~~~~~~~~~~~~~~~~l~~   89 (153)
T 3i5g_B           15 MQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPP-DDELNAMLK----ECPGQLNFTAFLTLFGEKVSGTDPEDALRN   89 (153)
T ss_dssp             HHHHHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCC-HHHHHHHHH----TSSSCCCSHHHHHTTTTTTTTCCCHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCcc-HHHHHHHHH----hccCCccHHHHHHHHHhhhcccccHHHHHH
Confidence            357899999999999999999999999999999988 777777665    457889999999998754       57999


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +|+.||+|++|+|+.+||+.+|..+|.++|++++++||+.+|.| ||+|+|.
T Consensus        90 aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~  140 (153)
T 3i5g_B           90 AFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYN  140 (153)
T ss_dssp             HHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHH
T ss_pred             HHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHH
Confidence            99999999999999999999999999999999999999999998 9999874

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=99.84  E-value=1.6e-20  Score=167.17  Aligned_cols=138  Identities=31%  Similarity=0.481  Sum_probs=121.0

Q ss_pred             hhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhcc-CCchhHH
Q 043828          383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKR-IGNDDIL  461 (586)
Q Consensus       383 ~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~~~~~~~  461 (586)
                      ++++++++++|..+|.|++|.|+.+|| ..+..++..+   ++..+|+.+|.|++|.|+|+||+.++..... ....+.+
T Consensus         2 ~~~~~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~~---~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~   77 (155)
T 3ll8_B            2 ADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNP---LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKL   77 (155)
T ss_dssp             CHHHHHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTCT---THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHH
T ss_pred             HHHHHHHHHHHHHhCcCCCCeEcHHHH-HHhhccccch---HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHH
Confidence            578899999999999999999999999 6677766544   7899999999999999999999997765433 3556789


Q ss_pred             HHHHhhhcCCCCCcccHHHHHHHHHh-cCCCCCCHHHHHHHHHH----hcCCCCCceeHHHHHHHHhcc
Q 043828          462 SQAFRFFDKNQSGFIEVDELKEVLLE-DNAGPNGDQTIRDILRD----VDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       462 ~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~~~~~~----~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      +.+|+.+|.|++|+|+.+||..++.. +|...+ ..++..++..    +|.|+||.|+|+||+.++...
T Consensus        78 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~  145 (155)
T 3ll8_B           78 RFAFRIYDMDKDGYISNGELFQVLKMMVGNNLK-DTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL  145 (155)
T ss_dssp             HHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSC-HHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGG
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCC-HHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhcc
Confidence            99999999999999999999999998 576665 8889998888    999999999999999998753

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=99.84  E-value=4.9e-21  Score=180.21  Aligned_cols=163  Identities=16%  Similarity=0.267  Sum_probs=134.6

Q ss_pred             HhHHHHhhhhccCC-CCCCcCHHHHHHHHHhcCCCCCH-HHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHH
Q 043828          386 MAQIKQMFYMMDTD-KNGDLTFEELKDGLNMIGQKVSD-PDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQ  463 (586)
Q Consensus       386 ~~~~~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~-~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~  463 (586)
                      .++++++|+.||.+ ++|.|+.+||..+|..++..+.. +++..+|+.+|.|++|.|+|+||+.++.........+.++.
T Consensus        18 ~~ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~   97 (211)
T 2ggz_A           18 TQETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKW   97 (211)
T ss_dssp             ------CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHH
Confidence            34578899999998 89999999999999998876554 55999999999999999999999998776655566788999


Q ss_pred             HHhhhcCCCCCcccHHHHHHHHHhcC-----CCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhhhhh
Q 043828          464 AFRFFDKNQSGFIEVDELKEVLLEDN-----AGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRA  538 (586)
Q Consensus       464 ~F~~~D~d~~G~i~~~el~~~l~~~~-----~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d  538 (586)
                      +|+.||.|++|+|+.+||..++..++     .....++.+..+|..+|.|+||.|+|+||+.++...+.+..+|..    
T Consensus        98 ~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~----  173 (211)
T 2ggz_A           98 YFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAKDQDLLEIVYK----  173 (211)
T ss_dssp             HHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHTTTTTHHHHHH----
T ss_pred             HHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHhCHHHHHHHhc----
Confidence            99999999999999999999999876     344434568999999999999999999999999988888888873    


Q ss_pred             ccCcccHHHHHHHHHhh
Q 043828          539 MMSALSIKLFKDKSMEL  555 (586)
Q Consensus       539 ~~G~i~~~el~~~~~~~  555 (586)
                         .++.+|+..++..-
T Consensus       174 ---~~d~~~f~~~~~~~  187 (211)
T 2ggz_A          174 ---SFDFSNVLRVICNG  187 (211)
T ss_dssp             ---HSCTTHHHHHHHHH
T ss_pred             ---cCCHHHHHHHHhcC
Confidence               23366777776553

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=99.84  E-value=1.9e-20  Score=178.48  Aligned_cols=154  Identities=19%  Similarity=0.316  Sum_probs=133.4

Q ss_pred             CchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhc-CCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchh
Q 043828          381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI-GQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDD  459 (586)
Q Consensus       381 l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~-~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~  459 (586)
                      ++.++++.+.+.|..  .+++|.|+.+||..++..+ +...+...++.+|+.+|.|++|.|+|+||+.++.........+
T Consensus        61 ~s~~ei~~l~~~F~~--~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~  138 (229)
T 3dd4_A           61 FTKKELQILYRGFKN--ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQE  138 (229)
T ss_dssp             HHHHHHHHHHHHHHT--TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHHH
T ss_pred             CCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChHH
Confidence            456777788888876  5788999999999999985 4556677899999999999999999999999777665566678


Q ss_pred             HHHHHHhhhcCCCCCcccHHHHHHHHHhc------------CCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchH
Q 043828          460 ILSQAFRFFDKNQSGFIEVDELKEVLLED------------NAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGAD  527 (586)
Q Consensus       460 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~------------~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~  527 (586)
                      .++.+|+.||.|++|+|+.+||..++..+            +.... +++++.+|..+|.|+||.|+|+||+.++...+.
T Consensus       139 ~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~~~  217 (229)
T 3dd4_A          139 KLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAP-RQHVETFFQKMDKNKDGVVTIDEFIESCQKDEN  217 (229)
T ss_dssp             HHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------C-CTHHHHHHHHHCSSCSSBCCHHHHHHHHHTCHH
T ss_pred             HHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhH-HHHHHHHHHHhcCCCCCcEeHHHHHHHHHhCHH
Confidence            89999999999999999999999999876            23333 678999999999999999999999999999999


Q ss_pred             HHHHHHhhhh
Q 043828          528 WKMASRQYSR  537 (586)
Q Consensus       528 ~~~~F~~~D~  537 (586)
                      +.++|..||.
T Consensus       218 ~~~~~~~~D~  227 (229)
T 3dd4_A          218 IMRSMQLFEN  227 (229)
T ss_dssp             HHHHHHHHTT
T ss_pred             HHHHHHhccc
Confidence            9999999985

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=99.84  E-value=1e-20  Score=165.55  Aligned_cols=134  Identities=21%  Similarity=0.404  Sum_probs=120.4

Q ss_pred             hHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccC---CchhHH
Q 043828          385 QMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRI---GNDDIL  461 (586)
Q Consensus       385 ~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~---~~~~~~  461 (586)
                      ++++++++|..+|.|++|.|+.+||..+|+.+|..++..++..++.    |++|.|+|+||+.++......   ...+.+
T Consensus         3 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~   78 (140)
T 1ggw_A            3 DDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGDPEEF   78 (140)
T ss_dssp             CCTTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCCHHHH
T ss_pred             hHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCcccHHHH
Confidence            4567899999999999999999999999999999999999999987    899999999999876554322   234789


Q ss_pred             HHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          462 SQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       462 ~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      +.+|+.+|+|++|+|+.+||..+|..+|...+ ++++..++..+|. +||.|+|+||+.++..
T Consensus        79 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~-~~~~~~~~~~~d~-~dg~i~~~eF~~~~~~  139 (140)
T 1ggw_A           79 VKGFQVFDKDATGMIGVGELRYVLTSLGEKLS-NEEMDELLKGVPV-KDGMVNYHDFVQMILA  139 (140)
T ss_dssp             HHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSC-HHHHHHHHHHTTC-SSCCSTTTHHHHHHHC
T ss_pred             HHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCC-HHHHHHHHHhccC-CCCcEeHHHHHHHHhc
Confidence            99999999999999999999999999987766 8899999999999 9999999999998863

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=99.84  E-value=3.4e-20  Score=171.31  Aligned_cols=151  Identities=20%  Similarity=0.282  Sum_probs=124.8

Q ss_pred             hHHHHhhhhccCC-CCCCcCHHHHHHHHHhcCCC-CCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHH
Q 043828          387 AQIKQMFYMMDTD-KNGDLTFEELKDGLNMIGQK-VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQA  464 (586)
Q Consensus       387 ~~~~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~  464 (586)
                      .+++++|..+|.+ ++|.|+.+||..++..++.. .+.+++..+|+.+|.|++|.|+++||+.++.........+.++.+
T Consensus        25 ~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~  104 (190)
T 2l2e_A           25 KELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWA  104 (190)
T ss_dssp             HHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSCSCSHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHH
Confidence            3567788899998 79999999999999888544 456678999999999999999999999877666656667889999


Q ss_pred             HhhhcCCCCCcccHHHHHHHHHhc----CC-------CCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHH
Q 043828          465 FRFFDKNQSGFIEVDELKEVLLED----NA-------GPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASR  533 (586)
Q Consensus       465 F~~~D~d~~G~i~~~el~~~l~~~----~~-------~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~  533 (586)
                      |+.+|.|++|+|+.+||..++..+    |.       .....+++..+|..+|.|+||.|+|+||+.++...+.+...|.
T Consensus       105 f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~l~  184 (190)
T 2l2e_A          105 FQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDPTIVSALS  184 (190)
T ss_dssp             HHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHTCTHHHHHHH
T ss_pred             HhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCcHHHHHHH
Confidence            999999999999999999988762    21       1234778899999999999999999999999988888888888


Q ss_pred             hhhh
Q 043828          534 QYSR  537 (586)
Q Consensus       534 ~~D~  537 (586)
                      .||.
T Consensus       185 ~~d~  188 (190)
T 2l2e_A          185 LYDG  188 (190)
T ss_dssp             TTCS
T ss_pred             HHhc
Confidence            8774

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=99.83  E-value=1.7e-20  Score=169.85  Aligned_cols=123  Identities=24%  Similarity=0.403  Sum_probs=116.1

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc-------chHHHHH
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS-------GADWKMA  531 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~-------~~~~~~~  531 (586)
                      ..++++|..+|.|++|.|+.+||..+|..+|..++ ..++..++..+|.|++|.|+|+||+.++..       ...+..+
T Consensus        28 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~-~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~  106 (169)
T 3qrx_A           28 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPK-KEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKA  106 (169)
T ss_dssp             HHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCC-HHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCC-HHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHH
Confidence            56899999999999999999999999999998877 889999999999999999999999999874       3678899


Q ss_pred             HHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          532 SRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       532 F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      |+.||+|++|+|+.+||+.++..+|..+++++++.+++.+|.|+||.|++.
T Consensus       107 F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~  157 (169)
T 3qrx_A          107 FRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDED  157 (169)
T ss_dssp             HHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHH
T ss_pred             HHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHH
Confidence            999999999999999999999999999999999999999999999999874

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=99.83  E-value=1.4e-20  Score=175.22  Aligned_cols=149  Identities=19%  Similarity=0.285  Sum_probs=129.1

Q ss_pred             HhHHHHhhhhccCC-CCCCcCHHHHHHHHHhcCCCCCH-HHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHH
Q 043828          386 MAQIKQMFYMMDTD-KNGDLTFEELKDGLNMIGQKVSD-PDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQ  463 (586)
Q Consensus       386 ~~~~~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~-~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~  463 (586)
                      .++++++|..||.+ ++|.|+.+||..+|+.++..+.. +++..+|..+|.|++|.|+|+||+.++.........+.++.
T Consensus        13 ~~el~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~   92 (198)
T 2r2i_A           13 ATECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRW   92 (198)
T ss_dssp             TSCHHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHH
Confidence            34578899999998 89999999999999998877665 45999999999999999999999998877666667788999


Q ss_pred             HHhhhcCCCCCcccHHHHHHHHHhcC------CCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHh
Q 043828          464 AFRFFDKNQSGFIEVDELKEVLLEDN------AGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQ  534 (586)
Q Consensus       464 ~F~~~D~d~~G~i~~~el~~~l~~~~------~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~  534 (586)
                      +|+.+|.|++|+|+.+||..++..++      .....++.+..+|..+|.|+||.|+|+||+.++...+.+..++..
T Consensus        93 ~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~  169 (198)
T 2r2i_A           93 YFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQKDEVLLDILTR  169 (198)
T ss_dssp             HHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHTTCHHHHHHHHS
T ss_pred             HHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCHHHHHHHhc
Confidence            99999999999999999999998875      333434558999999999999999999999999987777776653

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.83  E-value=2.5e-20  Score=163.39  Aligned_cols=123  Identities=22%  Similarity=0.370  Sum_probs=115.7

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc-------chHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS-------GADWKM  530 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~-------~~~~~~  530 (586)
                      ...++.+|..+|.|++|.|+.+||..+|+.+|..++ ..++..++..+|.|++|.|+|+||+.++..       ...++.
T Consensus         5 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~-~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~   83 (142)
T 2bl0_C            5 VSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVE-PAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQ   83 (142)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCC-HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCC-HHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHH
Confidence            356899999999999999999999999999998877 889999999999999999999999999874       267999


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +|+.||+|++|+|+.+||+.++..+|..+++++++.+++.+| |+||.|++.
T Consensus        84 ~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~  134 (142)
T 2bl0_C           84 AFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITE-TEKGQIRYD  134 (142)
T ss_dssp             HHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC-CSSSEECSH
T ss_pred             HHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCcEeHH
Confidence            999999999999999999999999999999999999999999 999999974

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=99.83  E-value=3e-20  Score=190.21  Aligned_cols=145  Identities=32%  Similarity=0.649  Sum_probs=130.2

Q ss_pred             cCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh-ccCCc
Q 043828          379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL-KRIGN  457 (586)
Q Consensus       379 ~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-~~~~~  457 (586)
                      ..+..+++++++++|..+|.|++|.|+.+||..+|..++..++.++++.+|+.+|.|++|.|+|+||+.++... .....
T Consensus       304 ~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~  383 (450)
T 3sg6_A          304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS  383 (450)
T ss_dssp             -CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------C
T ss_pred             ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccch
Confidence            45677888999999999999999999999999999999999999999999999999999999999999876543 33445


Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      .+.++.+|+.+|.|++|+|+.+||..+|..+|.... +++++.++..+|.|+||.|+|+||+.++..
T Consensus       384 ~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls-~eei~~Lf~~~D~D~DG~IsfdEFv~~L~~  449 (450)
T 3sg6_A          384 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT-DEEVDEMIREADIDGDGQVNYEEFVQMMTA  449 (450)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCC-HHHHHHHHHHHCTTSSSSEEHHHHHHHHC-
T ss_pred             hhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence            678999999999999999999999999999998776 899999999999999999999999998864

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=99.83  E-value=2.1e-20  Score=175.40  Aligned_cols=158  Identities=13%  Similarity=0.153  Sum_probs=138.0

Q ss_pred             hHHHHhhhhccCC-CCCCcCHHHHHHHHHhcCCC-CCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHH
Q 043828          387 AQIKQMFYMMDTD-KNGDLTFEELKDGLNMIGQK-VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQA  464 (586)
Q Consensus       387 ~~~~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~  464 (586)
                      .++.++|..||.+ ++|.|+.+||..++..++.. .+..++..+|+.+|.|++|.|+++||+.++.........+.++.+
T Consensus        33 ~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~  112 (207)
T 2d8n_A           33 EELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWA  112 (207)
T ss_dssp             HHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSSSTTHHHH
T ss_pred             HHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHH
Confidence            4677788888888 79999999999999998765 788899999999999999999999999987766655677889999


Q ss_pred             HhhhcCCCCCcccHHHHHHHHHhc----C----CCCC-----CHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHH
Q 043828          465 FRFFDKNQSGFIEVDELKEVLLED----N----AGPN-----GDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMA  531 (586)
Q Consensus       465 F~~~D~d~~G~i~~~el~~~l~~~----~----~~~~-----~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~  531 (586)
                      |+.+|.|++|+|+.+||..++..+    |    ...+     .++++..+|..+|.|+||.|+|+||+.++...+.+...
T Consensus       113 f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~  192 (207)
T 2d8n_A          113 FSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTLANKEILRL  192 (207)
T ss_dssp             HHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHTTCCTTCCEEHHHHHHHHHHCHHHHHH
T ss_pred             HHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHhChHHHHH
Confidence            999999999999999999999875    5    2222     24679999999999999999999999999988899999


Q ss_pred             HHhhhhhccCccc
Q 043828          532 SRQYSRAMMSALS  544 (586)
Q Consensus       532 F~~~D~d~~G~i~  544 (586)
                      |..||..-.+.++
T Consensus       193 ~~~~~~~~~~~~~  205 (207)
T 2d8n_A          193 IQFEPQKVKEKMK  205 (207)
T ss_dssp             HSCCCSSCCCCC-
T ss_pred             HhhhhHHHHHHhc
Confidence            9999977766654

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=99.83  E-value=3.6e-20  Score=166.95  Aligned_cols=136  Identities=22%  Similarity=0.278  Sum_probs=117.8

Q ss_pred             hHhHHHHhhhhccCCCCCCcCHHHHHHHH----HhcCCCCCHHHHHHH-----------HHHhcCCCCCcccHhHHHhhh
Q 043828          385 QMAQIKQMFYMMDTDKNGDLTFEELKDGL----NMIGQKVSDPDVKML-----------MEAADVDGNGLLSCDEFVTMS  449 (586)
Q Consensus       385 ~~~~~~~~F~~~D~~~~G~i~~~el~~~l----~~~~~~~~~~~~~~~-----------~~~~D~d~dg~i~~~eF~~~~  449 (586)
                      ++++++++|..+|.|++|.|+.+||..++    ..+|..++..++..+           |..+|.|++|.|+|+||+.++
T Consensus         2 ~~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~   81 (166)
T 3akb_A            2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGA   81 (166)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTH
T ss_pred             HHHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            46789999999999999999999999975    456989998888755           799999999999999999866


Q ss_pred             hhhccCCc-------hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 043828          450 VHLKRIGN-------DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM  522 (586)
Q Consensus       450 ~~~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~  522 (586)
                      ........       .+.++.+|+.+|.|++|+|+.+||..++..+|  . +++++..++..+|.|+||.|+|+||+.++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--~-~~~~~~~~~~~~D~d~dg~i~~~ef~~~~  158 (166)
T 3akb_A           82 VKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--V-PEDLARQAAAALDTDGDGKVGETEIVPAF  158 (166)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT--C-CHHHHHHHHHHHCTTCSSBCCHHHHHHHH
T ss_pred             HHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--C-CHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            54332221       34589999999999999999999999999987  3 48899999999999999999999999987


Q ss_pred             h
Q 043828          523 T  523 (586)
Q Consensus       523 ~  523 (586)
                      .
T Consensus       159 ~  159 (166)
T 3akb_A          159 A  159 (166)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=99.83  E-value=7.8e-21  Score=180.72  Aligned_cols=148  Identities=21%  Similarity=0.313  Sum_probs=127.0

Q ss_pred             hhhcccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHH-HHHhcCCCCCHHHHHHHHHHh---------cCCCCCcccHh
Q 043828          374 LRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKD-GLNMIGQKVSDPDVKMLMEAA---------DVDGNGLLSCD  443 (586)
Q Consensus       374 l~~~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~-~l~~~~~~~~~~~~~~~~~~~---------D~d~dg~i~~~  443 (586)
                      ...+...++.+++.+++++|..+|.|++|.|+.+||.. +++.+|..++..++..++..+         |.|++|.|+|+
T Consensus        38 ~~~l~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~  117 (226)
T 2lvv_A           38 RCAIPRDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLV  117 (226)
T ss_dssp             HHHSCSSCCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCB
T ss_pred             HHHhchhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHH
Confidence            33456678899999999999999999999999999998 556778888887887787777         99999999999


Q ss_pred             HHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhc---CCCCCCHHHHHHHHHHhcCCCCCceeHHHHHH
Q 043828          444 EFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLED---NAGPNGDQTIRDILRDVDLDRDGRISFEEFKA  520 (586)
Q Consensus       444 eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~---~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~  520 (586)
                      ||+.++.........+.++.+|+.||+|++|+|+.+||..+|..+   |....   ++..+|..+|.|+||.|+|+||+.
T Consensus       118 EF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~---e~~~~~~~~D~d~dG~Is~~EF~~  194 (226)
T 2lvv_A          118 EFLEFRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDIT---DATTVFNEIDTNGSGVVTFDEFSC  194 (226)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCC---SCHHHHHHHCCSCSSCEEHHHHHH
T ss_pred             HHHHHHHHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHH---HHHHHHHHhCCCCCCcEeHHHHHH
Confidence            999854433333445789999999999999999999999999887   65543   489999999999999999999999


Q ss_pred             HHhc
Q 043828          521 MMTS  524 (586)
Q Consensus       521 ~~~~  524 (586)
                      ++..
T Consensus       195 ~~~~  198 (226)
T 2lvv_A          195 WAVT  198 (226)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            9875

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=99.83  E-value=4.7e-20  Score=164.82  Aligned_cols=124  Identities=21%  Similarity=0.333  Sum_probs=116.0

Q ss_pred             hhHHHHHHhhhc-CCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh-----------cc
Q 043828          458 DDILSQAFRFFD-KNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT-----------SG  525 (586)
Q Consensus       458 ~~~~~~~F~~~D-~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~-----------~~  525 (586)
                      ...++.+|..+| .|++|+|+.+||..+|+.+|..++ ..++..++..+|.|++|.|+|+||+.++.           ..
T Consensus        12 ~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~-~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~   90 (158)
T 2jnf_A           12 VKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQT-KSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQ   90 (158)
T ss_dssp             HHHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCS-HHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTTTTS
T ss_pred             HHHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchhhHH
Confidence            346899999999 999999999999999999998876 88999999999999999999999999984           33


Q ss_pred             hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          526 ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       526 ~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      ..++.+|+.||+|++|+|+.+||+.++..+|..++++++..+++.+|.|+||+|++.
T Consensus        91 ~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~  147 (158)
T 2jnf_A           91 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFE  147 (158)
T ss_dssp             STHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSEECSH
T ss_pred             HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCcEeHH
Confidence            679999999999999999999999999999999999999999999999999999974

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=99.83  E-value=4.3e-21  Score=181.68  Aligned_cols=151  Identities=17%  Similarity=0.301  Sum_probs=127.6

Q ss_pred             hhhhcccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHh-cCCCCCHHHHHHHHHHh---------cCCCCCcccH
Q 043828          373 VLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNM-IGQKVSDPDVKMLMEAA---------DVDGNGLLSC  442 (586)
Q Consensus       373 ~l~~~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~-~~~~~~~~~~~~~~~~~---------D~d~dg~i~~  442 (586)
                      +...+...++.+++.+++++|..+|.|++|.|+.+||..+|.. +|..++..++..++..+         |.|++|.|+|
T Consensus        34 l~~~~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~  113 (219)
T 3cs1_A           34 IRQAIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDF  113 (219)
T ss_dssp             HHHHSCCSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSS
T ss_pred             HHHHhcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCH
Confidence            3445567788999999999999999999999999999999987 78888777777665533         4589999999


Q ss_pred             hHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCC-CCCCHHHHHHHHHHhcCCCCCceeHHHHHHH
Q 043828          443 DEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNA-GPNGDQTIRDILRDVDLDRDGRISFEEFKAM  521 (586)
Q Consensus       443 ~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~-~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~  521 (586)
                      .||+.++.........+.++.+|+.||.|++|+|+.+||..+|..+|. ..+ .+++..+|..+|.|+||.|+|+||+.+
T Consensus       114 ~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~-~~e~~~l~~~~D~d~dG~I~~~EF~~~  192 (219)
T 3cs1_A          114 VEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAK-VEDPAALFKELDKNGTGSVTFDEFAAW  192 (219)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCC-CSCHHHHHHHHCTTSSSEEEHHHHHHH
T ss_pred             HHHHHHHHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCC-HHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence            999986544333334678999999999999999999999999998876 444 567999999999999999999999999


Q ss_pred             Hhc
Q 043828          522 MTS  524 (586)
Q Consensus       522 ~~~  524 (586)
                      +..
T Consensus       193 ~~~  195 (219)
T 3cs1_A          193 ASA  195 (219)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            874

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=99.82  E-value=7e-21  Score=168.24  Aligned_cols=122  Identities=20%  Similarity=0.321  Sum_probs=111.7

Q ss_pred             HHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHh-cCCCCCceeHHHHHHHHhcc------------h
Q 043828          460 ILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDV-DLDRDGRISFEEFKAMMTSG------------A  526 (586)
Q Consensus       460 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~~------------~  526 (586)
                      +++++|..+|.|++|.|+.+||..+|+.+|..++ ..++..++..+ |.|++|.|+|+||+.++...            .
T Consensus         5 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~-~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~   83 (148)
T 1m45_A            5 ANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPT-NQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTE   83 (148)
T ss_dssp             CCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCC-HHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTH
T ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCC-HHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccHH
Confidence            3677899999999999999999999999998877 88999999999 99999999999999988654            6


Q ss_pred             HHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          527 DWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       527 ~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      .++.+|+.||+|++|+|+.+||+.++..+|..+++++++.+++.+|.|+||.|++.
T Consensus        84 ~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~  139 (148)
T 1m45_A           84 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYK  139 (148)
T ss_dssp             HHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHH
T ss_pred             HHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHH
Confidence            78999999999999999999999999999999999999999999999999999974

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=99.82  E-value=2.2e-20  Score=171.56  Aligned_cols=140  Identities=16%  Similarity=0.254  Sum_probs=122.9

Q ss_pred             CchhhHhHHHHhhhhc-cCCCCCCcCHHHHHHHHHhcC----CCCCHHHHHHH-----------HHHhcCCCCCcccHhH
Q 043828          381 LPQDQMAQIKQMFYMM-DTDKNGDLTFEELKDGLNMIG----QKVSDPDVKML-----------MEAADVDGNGLLSCDE  444 (586)
Q Consensus       381 l~~~~~~~~~~~F~~~-D~~~~G~i~~~el~~~l~~~~----~~~~~~~~~~~-----------~~~~D~d~dg~i~~~e  444 (586)
                      +++++.++++++|..+ |.|++|.|+.+||..++..++    ..++..++..+           |+.+|.|++|.|+++|
T Consensus         2 ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~E   81 (185)
T 2sas_A            2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE   81 (185)
T ss_dssp             CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred             cCHHHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHH
Confidence            4567889999999999 999999999999999999888    88888888765           9999999999999999


Q ss_pred             HHhhhhhhcc---------CCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeH
Q 043828          445 FVTMSVHLKR---------IGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISF  515 (586)
Q Consensus       445 F~~~~~~~~~---------~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~  515 (586)
                      |+.++.....         ......++.+|+.+|+|++|+|+.+||..++..+|.  + ++++..+|..+|.|+||.|+|
T Consensus        82 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~--~-~~~~~~~~~~~D~d~dG~i~~  158 (185)
T 2sas_A           82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQL--Q-CADVPAVYNVITDGGKVTFDL  158 (185)
T ss_dssp             HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCC--C-CSSHHHHHHHHHTTTTSCCSH
T ss_pred             HHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCC--C-HHHHHHHHHHhcCCCCCcCcH
Confidence            9986654322         123467999999999999999999999999988773  3 567999999999999999999


Q ss_pred             HHHHHHHh
Q 043828          516 EEFKAMMT  523 (586)
Q Consensus       516 ~eF~~~~~  523 (586)
                      +||+.++.
T Consensus       159 ~ef~~~~~  166 (185)
T 2sas_A          159 NRYKELYY  166 (185)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99999876

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=99.82  E-value=6.8e-20  Score=164.25  Aligned_cols=124  Identities=19%  Similarity=0.320  Sum_probs=116.7

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc-------chHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS-------GADWKM  530 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~-------~~~~~~  530 (586)
                      ...++++|..+|.|++|.|+.+||..+|+.+|..++ ..++..++..+|.|++|.|+|+||+.++..       ...++.
T Consensus        22 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~-~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~  100 (161)
T 3fwb_A           22 KQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELP-KREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKR  100 (161)
T ss_dssp             HHHHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCC-HHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCC-HHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHH
Confidence            356899999999999999999999999999998777 889999999999999999999999998875       267899


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +|+.||+|++|+|+.+||+.++..+|..+++++++.+++.+|.|+||.|++.
T Consensus       101 ~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~  152 (161)
T 3fwb_A          101 AFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINEN  152 (161)
T ss_dssp             HHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHH
T ss_pred             HHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHH
Confidence            9999999999999999999999999999999999999999999999999974

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=99.82  E-value=1.9e-20  Score=162.15  Aligned_cols=129  Identities=19%  Similarity=0.355  Sum_probs=114.6

Q ss_pred             HHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh---hccCCchhHHHHHH
Q 043828          389 IKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH---LKRIGNDDILSQAF  465 (586)
Q Consensus       389 ~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~---~~~~~~~~~~~~~F  465 (586)
                      ++++|..+|.|++|.|+.+||..++..++..++.+++..+|+.+|.|++|.|+++||+.++..   ........+++.+|
T Consensus         2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f   81 (134)
T 1jfj_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY   81 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHH
Confidence            678999999999999999999999999999999999999999999999999999999987742   22223345699999


Q ss_pred             hhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 043828          466 RFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM  522 (586)
Q Consensus       466 ~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~  522 (586)
                      +.+|.|++|+|+.+||..++..+|..    . +..+|..+|.|+||.|+|+||+.++
T Consensus        82 ~~~D~d~~G~i~~~e~~~~l~~~~~~----~-~~~~~~~~D~~~dg~i~~~ef~~~l  133 (134)
T 1jfj_A           82 KLMDVDGDGKLTKEEVTSFFKKHGIE----K-VAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHHCCSSSSEEEHHHHHHHHTTTTCH----H-HHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             HHHCCCCCCccCHHHHHHHHHHhCHH----H-HHHHHHHhCCCCCCcEeHHHHHHHh
Confidence            99999999999999999999876542    2 8899999999999999999999876

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.82  E-value=1.4e-20  Score=182.74  Aligned_cols=141  Identities=17%  Similarity=0.145  Sum_probs=108.0

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcE--EEEEEeeccccCC---------------------hhcHHHHHHHHHHHHhC
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGET--YACKKIAKEKLKT---------------------EIDIDDVRREVEIMRHL  138 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~--~avK~i~~~~~~~---------------------~~~~~~~~~Ei~~l~~l  138 (586)
                      -|.+.+.||+|+||.||+|.+..+|+.  ||||++.......                     ......+.+|+.+|.+|
T Consensus        48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  127 (258)
T 1zth_A           48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA  127 (258)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred             chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence            378899999999999999998788999  9999975432110                     01123678899999999


Q ss_pred             CCCCC--eeEEEEEEEeCCeEEEEEeccCC-C----ChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH-HcCceeccCCC
Q 043828          139 PKHPN--IVTYKEAYEDKDAIYLVMELCEG-G----ELFDRIVNKGHYTERAAAAVGKTILRIVKVCH-ENGVMHRDLKP  210 (586)
Q Consensus       139 ~~hpn--Iv~l~~~~~~~~~~~iv~E~~~g-g----~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH-~~~ivHrDlkp  210 (586)
                       .|++  ++.++..    ...+|||||+.+ |    +|.+....   .++..+..++.|++.+|.||| +.||+||||||
T Consensus       128 -~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp  199 (258)
T 1zth_A          128 -KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE---LKELDVEGIFNDVVENVKRLYQEAELVHADLSE  199 (258)
T ss_dssp             -HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCST
T ss_pred             -HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCH
Confidence             6765  3444443    246899999942 3    56554332   235567889999999999999 99999999999


Q ss_pred             CceEeecCCCCCceEEeeccccccc
Q 043828          211 ENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       211 ~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      +|||+.   .  .++|+|||+|...
T Consensus       200 ~NILl~---~--~~~liDFG~a~~~  219 (258)
T 1zth_A          200 YNIMYI---D--KVYFIDMGQAVTL  219 (258)
T ss_dssp             TSEEES---S--SEEECCCTTCEET
T ss_pred             HHEEEc---C--cEEEEECcccccC
Confidence            999994   3  8999999999764

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=99.82  E-value=2.4e-19  Score=170.15  Aligned_cols=156  Identities=17%  Similarity=0.245  Sum_probs=132.6

Q ss_pred             CchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCC-CCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchh
Q 043828          381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQK-VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDD  459 (586)
Q Consensus       381 l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~  459 (586)
                      ++.++++.+.+.|...  |++|.|+.+||..++..++.. .+..++..+|+.+|.|++|.|+|+||+.++.........+
T Consensus        48 ~s~~ei~~l~~~Fd~~--d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~  125 (224)
T 1s1e_A           48 FTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHE  125 (224)
T ss_dssp             CCHHHHHHHHHHHHHH--CTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCCHHH
T ss_pred             CCHHHHHHHHHHHHhh--CCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccCCHHH
Confidence            5666665555555543  489999999999999998754 7889999999999999999999999999877665566778


Q ss_pred             HHHHHHhhhcCCCCCcccHHHHHHHHHhc----CCC----CC---CHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHH
Q 043828          460 ILSQAFRFFDKNQSGFIEVDELKEVLLED----NAG----PN---GDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADW  528 (586)
Q Consensus       460 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~----~~~----~~---~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~  528 (586)
                      .++.+|+.+|.|++|+|+.+||..++..+    |..    ..   ..+++..+|+.+|.|+||.|+|+||+.++...+.+
T Consensus       126 ~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~~~l  205 (224)
T 1s1e_A          126 KLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNI  205 (224)
T ss_dssp             HHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHTCHHH
T ss_pred             HHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhCHHH
Confidence            89999999999999999999999999876    532    11   24789999999999999999999999999998888


Q ss_pred             HHHHHhhhhh
Q 043828          529 KMASRQYSRA  538 (586)
Q Consensus       529 ~~~F~~~D~d  538 (586)
                      .+.|..++..
T Consensus       206 ~~~l~~~~~~  215 (224)
T 1s1e_A          206 MRSLQLFQNV  215 (224)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHhcCCCCC
Confidence            8999887754

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=99.82  E-value=5.6e-20  Score=162.06  Aligned_cols=134  Identities=16%  Similarity=0.262  Sum_probs=121.6

Q ss_pred             hhhHhHHHHhhhhccCCC-CCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh-ccCCchhH
Q 043828          383 QDQMAQIKQMFYMMDTDK-NGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL-KRIGNDDI  460 (586)
Q Consensus       383 ~~~~~~~~~~F~~~D~~~-~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-~~~~~~~~  460 (586)
                      .+++.+++++|..+|.|+ +|.|+.+||..+|+.+|..++..++..++..+|.|    |+|+||+.++... ......+.
T Consensus        10 ~~~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~~   85 (146)
T 2qac_A           10 LEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNVEE   85 (146)
T ss_dssp             HHHHSCHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHHH
T ss_pred             HHHHHHHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHHH
Confidence            456778999999999999 99999999999999999999999999999999987    9999999876543 33455778


Q ss_pred             HHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       461 ~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      ++.+|+.+|+|++|+|+.+||..++..+|...+ ++++..++..+  |+||.|+|+||+.++.
T Consensus        86 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~-~~~~~~~~~~~--d~dg~i~~~eF~~~l~  145 (146)
T 2qac_A           86 LIKMFAHFDNNCTGYLTKSQMKNILTTWGDALT-DQEAIDALNAF--SSEDNIDYKLFCEDIL  145 (146)
T ss_dssp             HHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCC-HHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCC-HHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence            999999999999999999999999999987766 88999999999  9999999999999875

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=99.82  E-value=3.2e-20  Score=168.76  Aligned_cols=136  Identities=19%  Similarity=0.231  Sum_probs=119.4

Q ss_pred             hhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcC----CCCCHHH-H--------HHHHHHhcCCCCCcccHhHHHhhh
Q 043828          383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIG----QKVSDPD-V--------KMLMEAADVDGNGLLSCDEFVTMS  449 (586)
Q Consensus       383 ~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~----~~~~~~~-~--------~~~~~~~D~d~dg~i~~~eF~~~~  449 (586)
                      ++++++++++|..+|.|++|.|+.+||..++..++    ..++..+ +        +.+|+.+|  ++|.|+|+||+.++
T Consensus         2 ~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~   79 (174)
T 1q80_A            2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSM   79 (174)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHH
Confidence            56788999999999999999999999999999888    8888887 6        46788888  99999999999876


Q ss_pred             hhhccC-----CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          450 VHLKRI-----GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       450 ~~~~~~-----~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      ......     ...+.++.+|+.+|+|++|+|+.+||..++..+|  .+ ++++..++..+|.|+||.|+|+||+.++.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g--~~-~~~~~~~~~~~D~d~dg~i~~~ef~~~~~  155 (174)
T 1q80_A           80 KEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--LD-KTMAPASFDAIDTNNDGLLSLEEFVIAGS  155 (174)
T ss_dssp             HHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHT--CC-GGGHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcC--CC-HHHHHHHHHHhCCCCCceEeHHHHHHHHH
Confidence            554331     1246799999999999999999999999999886  33 77899999999999999999999999876

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=99.81  E-value=6.2e-20  Score=166.72  Aligned_cols=149  Identities=15%  Similarity=0.209  Sum_probs=115.5

Q ss_pred             CHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhc-cCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHH
Q 043828          421 SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLK-RIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIR  499 (586)
Q Consensus       421 ~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~  499 (586)
                      +..++.++|..+|.|++|.|+.+||..++.... ...+...+..+|+.+|.|++|.|+.+||..++..       ...+.
T Consensus         5 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~-------~~~~~   77 (172)
T 2znd_A            5 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY-------ITDWQ   77 (172)
T ss_dssp             -CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHH-------HHHHH
T ss_pred             chhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH-------HHHHH
Confidence            456788888888888888888888887766554 3456677888888888888888888888887764       35677


Q ss_pred             HHHHHhcCCCCCceeHHHHHHHHhcc------hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhcc
Q 043828          500 DILRDVDLDRDGRISFEEFKAMMTSG------ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVEL  573 (586)
Q Consensus       500 ~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~  573 (586)
                      .+|..+|.|++|.|+.+||..++...      ..+..+|+.+|.|++|.|+.+|+..++...      +.+..+++.+|+
T Consensus        78 ~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~  151 (172)
T 2znd_A           78 NVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL------QRLTDIFRRYDT  151 (172)
T ss_dssp             HHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH------HHHHHHHHHHCT
T ss_pred             HHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH------HHHHHHHHHhCC
Confidence            88888888888888888888877532      567788888888888888888888877654      567888888888


Q ss_pred             CCCceEecC
Q 043828          574 KKSGQLRIP  582 (586)
Q Consensus       574 ~~dg~i~~~  582 (586)
                      |+||.|++.
T Consensus       152 d~dG~i~~~  160 (172)
T 2znd_A          152 DQDGWIQVS  160 (172)
T ss_dssp             TSSSCCCCC
T ss_pred             CCCCeEeee
Confidence            888888754

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=99.81  E-value=1.3e-19  Score=167.38  Aligned_cols=150  Identities=23%  Similarity=0.327  Sum_probs=127.2

Q ss_pred             HHHHhhhhccCC-CCCCcCHHHHHHHHHhcCC-CCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHH
Q 043828          388 QIKQMFYMMDTD-KNGDLTFEELKDGLNMIGQ-KVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAF  465 (586)
Q Consensus       388 ~~~~~F~~~D~~-~~G~i~~~el~~~l~~~~~-~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F  465 (586)
                      ++.++|..||.+ ++|.|+.+||..++..++. ..+.+++..+|..+|.|++|.|+++||..++.........+.++.+|
T Consensus        26 ~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f  105 (190)
T 1fpw_A           26 EIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAF  105 (190)
T ss_dssp             HHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCcHHHHHHHH
Confidence            455666666665 8999999999999998853 35567799999999999999999999999877666666778899999


Q ss_pred             hhhcCCCCCcccHHHHHHHHHhc----CCC-------CCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHh
Q 043828          466 RFFDKNQSGFIEVDELKEVLLED----NAG-------PNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQ  534 (586)
Q Consensus       466 ~~~D~d~~G~i~~~el~~~l~~~----~~~-------~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~  534 (586)
                      +.+|.|++|+|+.+||..++..+    |..       ....+++..+|..+|.|+||.|+++||+.++...+.+...|..
T Consensus       106 ~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~  185 (190)
T 1fpw_A          106 ELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGALNL  185 (190)
T ss_dssp             HHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSSTTHHHHHHH
T ss_pred             HHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhChHHHHHHhh
Confidence            99999999999999999999873    421       2336789999999999999999999999999988889999998


Q ss_pred             hhh
Q 043828          535 YSR  537 (586)
Q Consensus       535 ~D~  537 (586)
                      ||.
T Consensus       186 ~d~  188 (190)
T 1fpw_A          186 YDG  188 (190)
T ss_dssp             HHC
T ss_pred             ccc
Confidence            884

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=99.81  E-value=6.2e-20  Score=169.53  Aligned_cols=151  Identities=17%  Similarity=0.270  Sum_probs=128.9

Q ss_pred             hHHHHhhhhccCC-CCCCcCHHHHHHHHHhc-CCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHH
Q 043828          387 AQIKQMFYMMDTD-KNGDLTFEELKDGLNMI-GQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQA  464 (586)
Q Consensus       387 ~~~~~~F~~~D~~-~~G~i~~~el~~~l~~~-~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~  464 (586)
                      ++++++|..||.+ ++|.|+.+||..++..+ +......++..+|+.+|.|++|.|+++||+.++.........+.++.+
T Consensus        25 ~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~  104 (190)
T 1g8i_A           25 KEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWA  104 (190)
T ss_dssp             HHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcCCCHHHHHHHH
Confidence            4567788888887 89999999999999987 334567789999999999999999999999987766555677889999


Q ss_pred             HhhhcCCCCCcccHHHHHHHHHhc----CCC-------CCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHH
Q 043828          465 FRFFDKNQSGFIEVDELKEVLLED----NAG-------PNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASR  533 (586)
Q Consensus       465 F~~~D~d~~G~i~~~el~~~l~~~----~~~-------~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~  533 (586)
                      |+.+|.|++|+|+.+||..++..+    |..       ...++++..+|..+|.|+||.|+++||+.++...+.+...|.
T Consensus       105 f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~~~~~~~~~~~~~~  184 (190)
T 1g8i_A          105 FKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIVQALS  184 (190)
T ss_dssp             HHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHCHHHHHHHC
T ss_pred             HHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhChHHHHHHh
Confidence            999999999999999999999873    321       233778999999999999999999999999998888888888


Q ss_pred             hhhh
Q 043828          534 QYSR  537 (586)
Q Consensus       534 ~~D~  537 (586)
                      .||.
T Consensus       185 ~~~~  188 (190)
T 1g8i_A          185 LYDG  188 (190)
T ss_dssp             CBTT
T ss_pred             hhcc
Confidence            8763

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=99.81  E-value=7e-20  Score=169.43  Aligned_cols=150  Identities=21%  Similarity=0.296  Sum_probs=130.0

Q ss_pred             CHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHH
Q 043828          421 SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRD  500 (586)
Q Consensus       421 ~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~  500 (586)
                      +.+++.++|..+|.|++|.|+++||..++.......+.+.+..+|+.+|.|++|.|+.+||..++..       ...+..
T Consensus        25 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~-------~~~~~~   97 (191)
T 1y1x_A           25 DNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHF-------ILSMRE   97 (191)
T ss_dssp             TTSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH-------HHHHHH
T ss_pred             CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH-------HHHHHH
Confidence            4567999999999999999999999987755444567788999999999999999999999998874       356888


Q ss_pred             HHHHhcCCCCCceeHHHHHHHHhcc------hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccC
Q 043828          501 ILRDVDLDRDGRISFEEFKAMMTSG------ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELK  574 (586)
Q Consensus       501 ~~~~~d~~~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~  574 (586)
                      +|..+|.|++|.|+.+||..++...      +.+..+|+.+|.|++|.|+.+|+..++...      +.+..+++.+|+|
T Consensus        98 ~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d  171 (191)
T 1y1x_A           98 GFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV------CRVRNVFAFYDRE  171 (191)
T ss_dssp             HHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTT
T ss_pred             HHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH------HHHHHHHHHhCcC
Confidence            9999999999999999999988743      678899999999999999999999988764      5788999999999


Q ss_pred             CCceEecCC
Q 043828          575 KSGQLRIPH  583 (586)
Q Consensus       575 ~dg~i~~~~  583 (586)
                      +||.|++.+
T Consensus       172 ~dG~i~~~~  180 (191)
T 1y1x_A          172 RTGQVTFTF  180 (191)
T ss_dssp             CCSEEEEEH
T ss_pred             CCceEEeeH
Confidence            999988754

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=99.81  E-value=2.3e-19  Score=170.70  Aligned_cols=151  Identities=23%  Similarity=0.382  Sum_probs=125.9

Q ss_pred             CCchhhHhHHHHhhhhccCC--CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhc-cCC
Q 043828          380 NLPQDQMAQIKQMFYMMDTD--KNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLK-RIG  456 (586)
Q Consensus       380 ~l~~~~~~~~~~~F~~~D~~--~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-~~~  456 (586)
                      .++.+++++++++|..+|.|  ++|.|+.+||..+|.. ........+..+|+.+|.|++|.|+|+||+.++.... ...
T Consensus        41 ~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~  119 (226)
T 2zfd_A           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAP  119 (226)
T ss_dssp             SCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSC
T ss_pred             CCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCC
Confidence            57889999999999999999  9999999999999987 3344455688899999999999999999998776554 334


Q ss_pred             chhHHHHHHhhhcCCCCCcccHHHHHHHHH----hcCCCCCCHHHHHHH----HHHhcCCCCCceeHHHHHHHHhcchHH
Q 043828          457 NDDILSQAFRFFDKNQSGFIEVDELKEVLL----EDNAGPNGDQTIRDI----LRDVDLDRDGRISFEEFKAMMTSGADW  528 (586)
Q Consensus       457 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~----~~~~~~~~~~~~~~~----~~~~d~~~dg~i~~~eF~~~~~~~~~~  528 (586)
                      ..+.++.+|+.+|.|++|+|+.+||..++.    ..|...+ +++++.+    |..+|.|+||.|+|+||+.++...+.+
T Consensus       120 ~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~-~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~~~~~~  198 (226)
T 2zfd_A          120 IDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLK-DTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSL  198 (226)
T ss_dssp             HHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCC-HHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhChHH
Confidence            567899999999999999999999999995    4565555 6666555    459999999999999999999866544


Q ss_pred             HHHH
Q 043828          529 KMAS  532 (586)
Q Consensus       529 ~~~F  532 (586)
                      ...|
T Consensus       199 ~~~~  202 (226)
T 2zfd_A          199 LKNM  202 (226)
T ss_dssp             GGGG
T ss_pred             HHHh
Confidence            4433

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=99.81  E-value=1.5e-19  Score=159.36  Aligned_cols=123  Identities=24%  Similarity=0.382  Sum_probs=115.2

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKM  530 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~  530 (586)
                      ...++.+|+.+|.|++|.|+.+||..++..+|..++ ..++..++..+|.|++|.|+|+||+.++...       ..++.
T Consensus        10 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~-~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~   88 (147)
T 4ds7_A           10 IAEFKEAFALFDKDNSGSISASELATVMRSLGLSPS-EAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLE   88 (147)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCC-HHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCC-HHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHH
Confidence            456889999999999999999999999999998876 8899999999999999999999999988643       67899


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +|+.+|+|++|+|+.+||+.++..+|..++++++..+++.+| |+||.|++.
T Consensus        89 ~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~  139 (147)
T 4ds7_A           89 AFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIK  139 (147)
T ss_dssp             HHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHH
T ss_pred             HHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHH
Confidence            999999999999999999999999999999999999999999 999999974

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=99.81  E-value=3.9e-19  Score=164.16  Aligned_cols=165  Identities=16%  Similarity=0.210  Sum_probs=142.1

Q ss_pred             CCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCC-CCCcccHhHHHhhhhhhcc-CCchhHHHHHHhhhcCCCCCcc
Q 043828          399 DKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVD-GNGLLSCDEFVTMSVHLKR-IGNDDILSQAFRFFDKNQSGFI  476 (586)
Q Consensus       399 ~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d-~dg~i~~~eF~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~i  476 (586)
                      +.+|.|+.+|+..+.+.++  ++..+++.+|..+|.| ++|.|+++||..++..... ....+.++.+|+.+|.|++|.|
T Consensus         3 ~~~~~l~~~el~~~~~~~~--~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i   80 (190)
T 2l2e_A            3 KSQSKLSQDQLQDLVRSTR--FDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYI   80 (190)
T ss_dssp             CSSCCSCHHHHHHHHHHHC--SCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCE
T ss_pred             cccccCCHHHHHHHHHhcC--CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeE
Confidence            4678999999999998864  5889999999999999 8999999999998776533 2456789999999999999999


Q ss_pred             cHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc------------------chHHHHHHHhhhhh
Q 043828          477 EVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS------------------GADWKMASRQYSRA  538 (586)
Q Consensus       477 ~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~------------------~~~~~~~F~~~D~d  538 (586)
                      +.+||..++..++.... .+++..+|..+|.|++|.|+++||..++..                  .+.+..+|+.+|.|
T Consensus        81 ~~~ef~~~~~~~~~~~~-~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d  159 (190)
T 2l2e_A           81 DFKEFICALSVTSRGEL-NDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKN  159 (190)
T ss_dssp             EHHHHHHHHTTSSCSCS-HHHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCC
T ss_pred             eHHHHHHHHHHHcCCCH-HHHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCC
Confidence            99999999998877655 888999999999999999999999998764                  15688999999999


Q ss_pred             ccCcccHHHHHHHHHhhcccCChhhHHHHHHhhc
Q 043828          539 MMSALSIKLFKDKSMELTKSMELNKSMELKKSVE  572 (586)
Q Consensus       539 ~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d  572 (586)
                      ++|.|+.+|+..++...      ..+..++..+|
T Consensus       160 ~dG~I~~~Ef~~~~~~~------~~~~~~l~~~d  187 (190)
T 2l2e_A          160 KDGQLTLEEFCEGSKRD------PTIVSALSLYD  187 (190)
T ss_dssp             SSCCBCHHHHHHHHHTC------THHHHHHHTTC
T ss_pred             CCCcCcHHHHHHHHHhC------cHHHHHHHHHh
Confidence            99999999999998653      34556666655

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=99.81  E-value=5.6e-20  Score=188.23  Aligned_cols=124  Identities=23%  Similarity=0.399  Sum_probs=116.3

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKM  530 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~  530 (586)
                      .++++++|+.+|.|++|.|+.+||..+|+.++.... .++++.++..+|.|++|.|+|+||+.++...       +.++.
T Consensus       311 i~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s-~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~  389 (450)
T 3sg6_A          311 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIRE  389 (450)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-HHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------CHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCC-HHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccchhhHHHH
Confidence            356899999999999999999999999999998877 8899999999999999999999999998754       56999


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +|+.||+|++|+|+.+||+.++..+|..+++++++.|++.+|.|+||.|++.
T Consensus       390 aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~Isfd  441 (450)
T 3sg6_A          390 AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE  441 (450)
T ss_dssp             HHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSSEEHH
T ss_pred             HHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHH
Confidence            9999999999999999999999999999999999999999999999999975

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=99.81  E-value=9e-20  Score=167.43  Aligned_cols=150  Identities=18%  Similarity=0.296  Sum_probs=126.2

Q ss_pred             cCCchhhHhHHHHhhhhccC-----CC-C--CCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCc-ccHhHHHhhh
Q 043828          379 DNLPQDQMAQIKQMFYMMDT-----DK-N--GDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGL-LSCDEFVTMS  449 (586)
Q Consensus       379 ~~l~~~~~~~~~~~F~~~D~-----~~-~--G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~-i~~~eF~~~~  449 (586)
                      ..++.+++..++++|..+|.     |+ +  |.|+.+||.. +..+|..++..   .+|..+|.|++|. |+|+||+.++
T Consensus        12 ~~ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~~~---~l~~~~D~d~~G~~I~~~EF~~~~   87 (183)
T 1dgu_A           12 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKE---RICRVFSTSPAKDSLSFEDFLDLL   87 (183)
T ss_dssp             CSCCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTTHH---HHHHHHSCSSSSCCCCHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcHHH---HHHHHhCCCCCCCEecHHHHHHHH
Confidence            34678889999999999999     68 8  9999999999 99899887764   5788899999999 9999999977


Q ss_pred             hhhccC-CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCC----CCCCHHHHHH----HHHHhcCCCCCceeHHHHHH
Q 043828          450 VHLKRI-GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNA----GPNGDQTIRD----ILRDVDLDRDGRISFEEFKA  520 (586)
Q Consensus       450 ~~~~~~-~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~----~~~~~~~~~~----~~~~~d~~~dg~i~~~eF~~  520 (586)
                      ...... ...+.++.+|+.||.|++|+|+.+||..++..++.    ...+++++..    +|..+|.|+||.|+|+||+.
T Consensus        88 ~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~  167 (183)
T 1dgu_A           88 SVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH  167 (183)
T ss_dssp             HHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHHHHHH
T ss_pred             HHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence            654433 33568999999999999999999999999998876    1223666765    99999999999999999999


Q ss_pred             HHhcchHHHHHH
Q 043828          521 MMTSGADWKMAS  532 (586)
Q Consensus       521 ~~~~~~~~~~~F  532 (586)
                      ++...+.+...|
T Consensus       168 ~~~~~~~~~~~~  179 (183)
T 1dgu_A          168 VISRSPDFASSF  179 (183)
T ss_dssp             HHCSSCHHHHCC
T ss_pred             HHHhChHHHHhc
Confidence            998765555443

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=99.81  E-value=5.6e-20  Score=173.93  Aligned_cols=122  Identities=22%  Similarity=0.150  Sum_probs=86.5

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhhhhh
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRA  538 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d  538 (586)
                      +.++++|+.+|+|++|.|+.+||..+|+.+|...+ ..+++.++..+|.|++|.|+|+||+.++.....++.+|+.||+|
T Consensus        51 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~-~~~~~~l~~~~D~d~dg~I~~~EF~~~~~~~~~l~~~F~~~D~d  129 (220)
T 3sjs_A           51 TRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLS-PQTALRMMRIFDTDFNGHISFYEFMAMYKFMELAYNLFVMNARA  129 (220)
T ss_dssp             HHHHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCC-HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCC-HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            34666777777777777777777777777666555 66677777777777777777777777776666677777777777


Q ss_pred             ccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          539 MMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       539 ~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      ++|+|+.+||+.++..+|..+++++++.+++.+| |+||+|++.
T Consensus       130 ~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~  172 (220)
T 3sjs_A          130 RSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLN  172 (220)
T ss_dssp             STTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHH
T ss_pred             CCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHH
Confidence            7777777777777777777777777777777777 777777653

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=99.81  E-value=5e-20  Score=172.93  Aligned_cols=142  Identities=23%  Similarity=0.374  Sum_probs=122.1

Q ss_pred             cCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccC---
Q 043828          379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRI---  455 (586)
Q Consensus       379 ~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~---  455 (586)
                      ..++++++++++++|..+|.|++|+|+.+||..++ .+|..++.   +++|+.+|.|++|.|+|+||+.++......   
T Consensus        21 ~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~-~lg~~~~~---~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~   96 (208)
T 2ct9_A           21 TGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-ELAINPLG---DRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDN   96 (208)
T ss_dssp             HCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCH-HHHTSTTH---HHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC--
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCcH---HHHHHHHcCCCCCcCcHHHHHHHHHhhccccch
Confidence            35678889999999999999999999999999865 56666654   568999999999999999999876544321   


Q ss_pred             -------------CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhc-CCCCCCHHHHHHH----HHHhcCCCCCceeHHH
Q 043828          456 -------------GNDDILSQAFRFFDKNQSGFIEVDELKEVLLED-NAGPNGDQTIRDI----LRDVDLDRDGRISFEE  517 (586)
Q Consensus       456 -------------~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-~~~~~~~~~~~~~----~~~~d~~~dg~i~~~e  517 (586)
                                   ...+.++.+|+.||+|++|+|+.+||..+|..+ |...+ ++++..+    |..+|.|+||.|+|+|
T Consensus        97 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s-~~~~~~l~~~~~~~~D~d~dG~Is~~E  175 (208)
T 2ct9_A           97 EKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNIS-DEQLGSIADRTIQEADQDGDSAISFTE  175 (208)
T ss_dssp             ---------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCC-HHHHHHHHHHHHHHHCSSSSSSEEHHH
T ss_pred             hhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCC-HHHHHHHHHHHHHHhCCCCCCcCcHHH
Confidence                         256789999999999999999999999999986 76665 8888887    9999999999999999


Q ss_pred             HHHHHhcc
Q 043828          518 FKAMMTSG  525 (586)
Q Consensus       518 F~~~~~~~  525 (586)
                      |+.++...
T Consensus       176 F~~~~~~~  183 (208)
T 2ct9_A          176 FVKVLEKV  183 (208)
T ss_dssp             HHHTTTTS
T ss_pred             HHHHHhcc
Confidence            99998764

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=99.81  E-value=1.8e-19  Score=164.73  Aligned_cols=125  Identities=23%  Similarity=0.398  Sum_probs=114.4

Q ss_pred             chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHH
Q 043828          457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWK  529 (586)
Q Consensus       457 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~  529 (586)
                      ....++.+|..+|.|++|.|+.+||..+|..+|..+. ..++..++..+|.|++|.|+|+||+.++...       ..++
T Consensus         9 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~-~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~   87 (179)
T 2f2o_A            9 QIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIR   87 (179)
T ss_dssp             HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCC-HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCC-HHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccHHHHH
Confidence            3467899999999999999999999999999998877 8889999999999999999999999988643       5688


Q ss_pred             HHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          530 MASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       530 ~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      .+|+.||+|++|+|+.+||+.++..+|..++++++..+++.+|.|+||.|++.
T Consensus        88 ~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~  140 (179)
T 2f2o_A           88 EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE  140 (179)
T ss_dssp             HHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHH
T ss_pred             HHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHH
Confidence            99999999999999999999999999999999999999999999999999974

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=99.81  E-value=9.7e-20  Score=161.61  Aligned_cols=124  Identities=19%  Similarity=0.381  Sum_probs=115.4

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc-----------ch
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS-----------GA  526 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~-----------~~  526 (586)
                      ...++++|..+|.|++|.|+.+||..+|+.+|..++ ..++..++..+|.|++|.|+|+||+.++..           ..
T Consensus        10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~-~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~   88 (153)
T 3ox6_A           10 IEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPT-EMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVK   88 (153)
T ss_dssp             HHHHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCC-HHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCC-HHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHH
Confidence            356899999999999999999999999999998777 889999999999999999999999998853           25


Q ss_pred             HHHHHHHhhhhhccCcccHHHHHHHHHh-hcccCChhhHHHHHHhhccCCCceEecC
Q 043828          527 DWKMASRQYSRAMMSALSIKLFKDKSME-LTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       527 ~~~~~F~~~D~d~~G~i~~~el~~~~~~-~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      .++.+|+.+|+|++|+|+.+||+.++.. +|..+++++++.+++.+|.|+||.|++.
T Consensus        89 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~  145 (153)
T 3ox6_A           89 ELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFE  145 (153)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHH
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHH
Confidence            6899999999999999999999999999 8999999999999999999999999874

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=99.80  E-value=3.8e-19  Score=166.70  Aligned_cols=151  Identities=21%  Similarity=0.361  Sum_probs=125.7

Q ss_pred             CCchhhHhHHHHhhhhccCC--CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhcc-CC
Q 043828          380 NLPQDQMAQIKQMFYMMDTD--KNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKR-IG  456 (586)
Q Consensus       380 ~l~~~~~~~~~~~F~~~D~~--~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~~  456 (586)
                      .++.+++..++++|..+|.|  ++|.|+.+||..+|.. ........+..+|+.+|.|++|.|+|+||+.++..... ..
T Consensus        30 ~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~  108 (207)
T 2ehb_A           30 PFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAP  108 (207)
T ss_dssp             SCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSC
T ss_pred             CCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCC
Confidence            57788999999999999999  9999999999999987 33444567889999999999999999999997765542 34


Q ss_pred             chhHHHHHHhhhcCCCCCcccHHHHHHHHH----hcCCCCCCHHHHHHH----HHHhcCCCCCceeHHHHHHHHhcchHH
Q 043828          457 NDDILSQAFRFFDKNQSGFIEVDELKEVLL----EDNAGPNGDQTIRDI----LRDVDLDRDGRISFEEFKAMMTSGADW  528 (586)
Q Consensus       457 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~----~~~~~~~~~~~~~~~----~~~~d~~~dg~i~~~eF~~~~~~~~~~  528 (586)
                      ..+.++.+|+.+|.|++|+|+.+||..++.    ..|...+ ++++..+    |..+|.|+||.|+|+||+.++...+.+
T Consensus       109 ~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~-~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~  187 (207)
T 2ehb_A          109 VHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLS-EDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSL  187 (207)
T ss_dssp             HHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCC-HHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCGGG
T ss_pred             HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccC-HHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhChHH
Confidence            567899999999999999999999999985    4465555 6666554    468999999999999999999876555


Q ss_pred             HHHH
Q 043828          529 KMAS  532 (586)
Q Consensus       529 ~~~F  532 (586)
                      ...|
T Consensus       188 ~~~~  191 (207)
T 2ehb_A          188 IKNM  191 (207)
T ss_dssp             GGGG
T ss_pred             HHHh
Confidence            4444

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=99.80  E-value=1.1e-19  Score=162.99  Aligned_cols=124  Identities=19%  Similarity=0.324  Sum_probs=113.6

Q ss_pred             hhHHHHHHhhhcCCC-CCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc----------h
Q 043828          458 DDILSQAFRFFDKNQ-SGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG----------A  526 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~-~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~----------~  526 (586)
                      ...++.+|..+|.|+ +|.|+.+||..+|+.+|..++ ..++..++..+|.|++|.|+|+||+.++...          .
T Consensus        17 ~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~-~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~   95 (161)
T 1dtl_A           17 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPT-PEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEE   95 (161)
T ss_dssp             HHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCC-HHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHH
T ss_pred             HHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCC-HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHH
Confidence            456899999999999 999999999999999998777 8899999999999999999999999987642          4


Q ss_pred             HHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          527 DWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       527 ~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      .++.+|+.||+|++|+|+.+||+.++..+|..+++++++.+++.+|.|+||.|++.
T Consensus        96 ~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~  151 (161)
T 1dtl_A           96 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD  151 (161)
T ss_dssp             HHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHH
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHH
Confidence            58899999999999999999999999999999999999999999999999999974

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=99.80  E-value=1.1e-19  Score=166.01  Aligned_cols=147  Identities=22%  Similarity=0.323  Sum_probs=123.0

Q ss_pred             hhhcccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhc---CCCCCcccHhHHHhhhh
Q 043828          374 LRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAAD---VDGNGLLSCDEFVTMSV  450 (586)
Q Consensus       374 l~~~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D---~d~dg~i~~~eF~~~~~  450 (586)
                      +.+++......+..++++.|..+|  ++|+|+.+||..++   |.+++...+..+|..+|   .+++|.|+|+||+.++.
T Consensus        15 l~~~~~~~~~~~~~~~~~~F~~~D--~dG~I~~~el~~~l---g~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~   89 (179)
T 3a8r_A           15 LQFVTAKVGNDGWAAVEKRFNQLQ--VDGVLLRSRFGKCI---GMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYE   89 (179)
T ss_dssp             HHHHHHHHCCCCHHHHHHHHHHHC--BTTBEEGGGHHHHH---TCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHH
T ss_pred             HHHHHhccchhhHHHHHHHHhccC--CCCCCcHHHHHHHH---CCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHH
Confidence            444554444466789999999999  89999999999865   67788888999999888   56789999999998766


Q ss_pred             hhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHH-hcCCC-C-----CCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          451 HLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLL-EDNAG-P-----NGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       451 ~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~-~~~~~-~-----~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      ........+.++.+|+.||+|++|+|+.+||..+|. .+|.. +     .+++++..+|..+|.|+||.|+|+||+.++.
T Consensus        90 ~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~  169 (179)
T 3a8r_A           90 QLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLL  169 (179)
T ss_dssp             HHHCCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC
T ss_pred             HHcCCCHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            554445677899999999999999999999999998 77765 3     0378899999999999999999999999987


Q ss_pred             cc
Q 043828          524 SG  525 (586)
Q Consensus       524 ~~  525 (586)
                      ..
T Consensus       170 ~~  171 (179)
T 3a8r_A          170 QS  171 (179)
T ss_dssp             --
T ss_pred             hC
Confidence            53

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=99.80  E-value=2.3e-19  Score=173.97  Aligned_cols=154  Identities=18%  Similarity=0.271  Sum_probs=131.5

Q ss_pred             CchhhHhHHHHhhhhccC-CCCCCcCHHHHHHHHHhcC-CCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCch
Q 043828          381 LPQDQMAQIKQMFYMMDT-DKNGDLTFEELKDGLNMIG-QKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGND  458 (586)
Q Consensus       381 l~~~~~~~~~~~F~~~D~-~~~G~i~~~el~~~l~~~~-~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~  458 (586)
                      +..+++..+   |..||. +++|.|+.+||..++..++ ...+..++..+|..+|.|++|.|+|+||+.++.........
T Consensus        88 ~s~~ei~~l---~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~  164 (256)
T 2jul_A           88 FTKKELQSL---YRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVH  164 (256)
T ss_dssp             SCHHHHHHH---HHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCHH
T ss_pred             CCHHHHHHH---HHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccChH
Confidence            555655555   444444 4899999999999999885 56778899999999999999999999999987766666678


Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhc----CC-------CCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchH
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLED----NA-------GPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGAD  527 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~----~~-------~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~  527 (586)
                      +.++.+|+.+|.|++|+|+.+||..++..+    |.       ....++++..+|..+|.|+||.|+|+||+.++...+.
T Consensus       165 ~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~~~  244 (256)
T 2jul_A          165 EKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDEN  244 (256)
T ss_dssp             HHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHHCSS
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhCHH
Confidence            899999999999999999999999999876    42       1223788999999999999999999999999998888


Q ss_pred             HHHHHHhhhh
Q 043828          528 WKMASRQYSR  537 (586)
Q Consensus       528 ~~~~F~~~D~  537 (586)
                      +.++|..||+
T Consensus       245 l~~~l~~~d~  254 (256)
T 2jul_A          245 IMNSMQLFEN  254 (256)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHhhcc
Confidence            9999999884

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=99.80  E-value=2.4e-19  Score=160.83  Aligned_cols=124  Identities=22%  Similarity=0.330  Sum_probs=115.4

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc----------chH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS----------GAD  527 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~----------~~~  527 (586)
                      ...++++|..+|.|++|.|+.+||..++..+|..++ ..++..++..+|.|++|.|+|+||+.++..          ...
T Consensus        19 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~-~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~   97 (162)
T 1top_A           19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPT-KEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEE   97 (162)
T ss_dssp             HHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCC-HHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCC-HHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccccccHHH
Confidence            457899999999999999999999999999998776 889999999999999999999999998753          256


Q ss_pred             HHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          528 WKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       528 ~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      ++.+|+.||+|++|+|+.+||+.++..+|..++++++..+++.+|.|+||.|++.
T Consensus        98 ~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  152 (162)
T 1top_A           98 LANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFD  152 (162)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHH
Confidence            8899999999999999999999999999999999999999999999999999874

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=99.80  E-value=1.1e-19  Score=159.62  Aligned_cols=120  Identities=17%  Similarity=0.325  Sum_probs=110.6

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKM  530 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~  530 (586)
                      ...++++|+.+|+|++|+|+.+||..+|+.+|..++ ..++..++..    ++|.|+|+||+.++...       ..++.
T Consensus         6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~-~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~~~~~l~~   80 (143)
T 3j04_B            6 IQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPT-DEYLEGMMSE----APGPINFTMFLTMFGEKLNGTDPEDVIRN   80 (143)
T ss_dssp             HHHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCC-HHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSCCHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCC-HHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCCcHHHHHH
Confidence            356899999999999999999999999999998877 7778777765    89999999999998743       67999


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +|+.||+|++|+|+.+||+.++..+|..+++++++.+++.+|.|+||+|++.
T Consensus        81 ~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~  132 (143)
T 3j04_B           81 AFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYV  132 (143)
T ss_dssp             HHTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCST
T ss_pred             HHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHH
Confidence            9999999999999999999999999999999999999999999999999985

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=99.79  E-value=1e-19  Score=162.30  Aligned_cols=123  Identities=18%  Similarity=0.224  Sum_probs=114.7

Q ss_pred             hhHHHHHHhhhcC--CCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc--------hH
Q 043828          458 DDILSQAFRFFDK--NQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG--------AD  527 (586)
Q Consensus       458 ~~~~~~~F~~~D~--d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~--------~~  527 (586)
                      ...++++|..+|.  |++|.|+.+||..+|+.+|..++ ..++..+ ..+|.|++|.|+|+||+.++...        ..
T Consensus         8 ~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~-~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~   85 (156)
T 1wdc_C            8 IDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPR-NEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFAD   85 (156)
T ss_dssp             HHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCC-HHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHH
T ss_pred             HHHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCC-HHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHH
Confidence            3468999999999  99999999999999999998877 8889999 99999999999999999988643        67


Q ss_pred             HHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHh--hccCCCceEecC
Q 043828          528 WKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKS--VELKKSGQLRIP  582 (586)
Q Consensus       528 ~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~--~d~~~dg~i~~~  582 (586)
                      ++.+|+.||+|++|+|+.+||+.++..+|..+++++++.+++.  +|.|+||+|++.
T Consensus        86 l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~  142 (156)
T 1wdc_C           86 YMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYE  142 (156)
T ss_dssp             HHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHH
Confidence            8999999999999999999999999999999999999999999  999999999974

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=99.79  E-value=7.8e-20  Score=169.91  Aligned_cols=124  Identities=18%  Similarity=0.210  Sum_probs=103.1

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc------hHHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG------ADWKMA  531 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~~~~  531 (586)
                      ...++++|+.+|.|++|.|+.+||..+|..+|...+ ..++..++..+|.|++|.|+|+||+.++...      +.++.+
T Consensus        56 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~-~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~  134 (197)
T 3pm8_A           56 INNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKI-PPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIP  134 (197)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHC-----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHH
Confidence            456899999999999999999999999999988766 7789999999999999999999999887643      578999


Q ss_pred             HHhhhhhccCcccHHHHHHHHHhh--cccCChhhHHHHHHhhccCCCceEecC
Q 043828          532 SRQYSRAMMSALSIKLFKDKSMEL--TKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       532 F~~~D~d~~G~i~~~el~~~~~~~--g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      |+.||+|++|+|+.+||+.++..+  |..+++++++.+++.+|.|+||.|++.
T Consensus       135 F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~  187 (197)
T 3pm8_A          135 FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFH  187 (197)
T ss_dssp             HHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHHHHCTTCSSSEEHH
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcCCCCCcCcHH
Confidence            999999999999999999999988  788999999999999999999999974

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.79  E-value=2.7e-19  Score=157.24  Aligned_cols=121  Identities=17%  Similarity=0.291  Sum_probs=112.3

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc--------hHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG--------ADWK  529 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~--------~~~~  529 (586)
                      .++++++|+.+|+|++|.|+.+||..+|+.+|..++ ..++..++..   |++|.|+|+||+.++...        ..++
T Consensus         4 ~~el~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~-~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~   79 (145)
T 2bl0_B            4 ADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPT-NAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTPTEQSKEML   79 (145)
T ss_dssp             HHHHHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCC-HHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCGGGGHHHHH
T ss_pred             HHHHHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCC-HHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcCcccHHHHH
Confidence            344999999999999999999999999999998877 8889999988   889999999999998753        5789


Q ss_pred             HHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          530 MASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       530 ~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      .+|+.||+|++|+|+.+||+.++..+|..+++++++.+++.+|.|+||.|++.
T Consensus        80 ~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  132 (145)
T 2bl0_B           80 DAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYE  132 (145)
T ss_dssp             HHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHH
T ss_pred             HHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHH
Confidence            99999999999999999999999999999999999999999999999999974

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=99.79  E-value=4.1e-19  Score=156.81  Aligned_cols=122  Identities=20%  Similarity=0.324  Sum_probs=114.2

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHh---cCCCCCceeHHHHHHHHhcc---------
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDV---DLDRDGRISFEEFKAMMTSG---------  525 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~---d~~~dg~i~~~eF~~~~~~~---------  525 (586)
                      ..+++.+|..+|+|++|+|+.+||..+|+.+|..++ ..++..++..+   |.|+ |.|+|+||+.++...         
T Consensus         7 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~-~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~   84 (149)
T 2mys_C            7 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPT-NAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTF   84 (149)
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCC-HHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchH
Confidence            356889999999999999999999999999998877 88899999999   9999 999999999988753         


Q ss_pred             hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          526 ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       526 ~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      ..++.+|+.||+|++|+|+.+||+.++..+|..++++++..+++. |.|+||.|++.
T Consensus        85 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~  140 (149)
T 2mys_C           85 EDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYE  140 (149)
T ss_pred             HHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHH
Confidence            678999999999999999999999999999999999999999999 99999999975

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=99.79  E-value=4.9e-19  Score=163.66  Aligned_cols=124  Identities=18%  Similarity=0.266  Sum_probs=111.9

Q ss_pred             chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-----hHHHHH
Q 043828          457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-----ADWKMA  531 (586)
Q Consensus       457 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-----~~~~~~  531 (586)
                      ....++++|..+|.|++|.|+.+||..+|+.+|....  .++..++..+|.|++|.|+|+||+.++...     +.++.+
T Consensus        50 ~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~--~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~l~~~  127 (191)
T 3k21_A           50 DVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP--YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQLSKKLIYCA  127 (191)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC--TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGGCCHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH--HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhhccHHHHHHH
Confidence            4467899999999999999999999999999988765  678999999999999999999999998654     678999


Q ss_pred             HHhhhhhccCcccHHHHHHHHHh--hcccCCh---hhHHHHHHhhccCCCceEecC
Q 043828          532 SRQYSRAMMSALSIKLFKDKSME--LTKSMEL---NKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       532 F~~~D~d~~G~i~~~el~~~~~~--~g~~~~~---~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      |+.||+|++|+|+.+||+.++..  .|..+++   +++..+++.+|.|+||+|++.
T Consensus       128 F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~  183 (191)
T 3k21_A          128 FRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFH  183 (191)
T ss_dssp             HHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHHHCSSSSSSBCHH
T ss_pred             HHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCHhHHHHHHHHHHHhcCCCCCeECHH
Confidence            99999999999999999999987  5667776   469999999999999999874

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=99.79  E-value=4.9e-20  Score=163.37  Aligned_cols=123  Identities=17%  Similarity=0.264  Sum_probs=112.9

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCC--CCCceeHHHHHHHHhcc---------h
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLD--RDGRISFEEFKAMMTSG---------A  526 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~--~dg~i~~~eF~~~~~~~---------~  526 (586)
                      ...++.+|..+|.|++|+|+.+||..+|+.+|..++ ..++..++..+|.|  ++|.|+|+||+.++...         .
T Consensus         9 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~-~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~~   87 (151)
T 1w7j_B            9 LEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPT-NAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYE   87 (151)
T ss_dssp             --CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCC-HHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCC-HHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCCCcHH
Confidence            345899999999999999999999999999998887 88899999999999  99999999999988642         4


Q ss_pred             HHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          527 DWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       527 ~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      .++.+|+.||+|++|+|+.+||+.++..+|..+++++++.+++.+| |+||.|++.
T Consensus        88 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~  142 (151)
T 1w7j_B           88 DYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYE  142 (151)
T ss_dssp             CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHH
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHH
Confidence            5788999999999999999999999999999999999999999999 999999974

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.79  E-value=2.4e-19  Score=165.33  Aligned_cols=122  Identities=20%  Similarity=0.320  Sum_probs=113.1

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc------hHHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG------ADWKMA  531 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~~~~  531 (586)
                      ...++++|..+|.|++|.|+.+||..+|..+|..++ +.++..++..+|.|++|.|+|+||+.++...      ..++.+
T Consensus         9 ~~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~-~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~l~~~   87 (188)
T 1s6i_A            9 IGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELM-ESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSA   87 (188)
T ss_dssp             TCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCC-HHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCC-HHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHHHHHHH
Confidence            456899999999999999999999999999988776 8899999999999999999999999988643      568999


Q ss_pred             HHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          532 SRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       532 F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      |+.||+|++|+|+.+||+.++..+|  +++++++.+++.+|.|+||.|++.
T Consensus        88 F~~~D~d~dG~Is~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dG~Is~~  136 (188)
T 1s6i_A           88 FSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDNDGQIDYG  136 (188)
T ss_dssp             HHHTTTTCSSEEEHHHHHHTTTTTT--CCTTHHHHHHHHHCSSSSSEEETT
T ss_pred             HHHHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcEeHH
Confidence            9999999999999999999999888  788999999999999999999985

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=99.79  E-value=3.2e-19  Score=155.94  Aligned_cols=119  Identities=18%  Similarity=0.292  Sum_probs=110.3

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc---------hHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG---------ADW  528 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~---------~~~  528 (586)
                      .++++++|..+|.|++|.|+.+||..+|+.+|..++ ..++..++.    +++|.|+|+||+.++...         ..+
T Consensus         4 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~-~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~   78 (140)
T 1ggw_A            4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPT-LAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGDPEEF   78 (140)
T ss_dssp             CTTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCC-HHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCCHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCC-HHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCcccHHHH
Confidence            346889999999999999999999999999998777 788888876    889999999999998754         679


Q ss_pred             HHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          529 KMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       529 ~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +.+|+.||+|++|+|+.+||+.++..+|..+++++++.+++.+|. +||.|++.
T Consensus        79 ~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~  131 (140)
T 1ggw_A           79 VKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYH  131 (140)
T ss_dssp             HHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTT
T ss_pred             HHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHH
Confidence            999999999999999999999999999999999999999999999 99999885

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=99.79  E-value=1.4e-18  Score=160.36  Aligned_cols=165  Identities=19%  Similarity=0.265  Sum_probs=141.2

Q ss_pred             CCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCC-CCCcccHhHHHhhhhhhcc-CCchhHHHHHHhhhcCCCCCcc
Q 043828          399 DKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVD-GNGLLSCDEFVTMSVHLKR-IGNDDILSQAFRFFDKNQSGFI  476 (586)
Q Consensus       399 ~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d-~dg~i~~~eF~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~i  476 (586)
                      ++.+.|+.+++..+.+..  .++.+++..+|+.+|.+ ++|.|+++||..++..... ....+.++.+|+.+|.|++|.|
T Consensus         3 ~~~~~l~~~~l~~l~~~~--~~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i   80 (190)
T 1fpw_A            3 AKTSKLSKDDLTCLKQST--YFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFI   80 (190)
T ss_dssp             CCSCCSTTHHHHHHTTTC--CSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEE
T ss_pred             cccCCCCHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcE
Confidence            456789999999988764  57899999999999987 8999999999998766532 2456679999999999999999


Q ss_pred             cHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc----------------c--hHHHHHHHhhhhh
Q 043828          477 EVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS----------------G--ADWKMASRQYSRA  538 (586)
Q Consensus       477 ~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~----------------~--~~~~~~F~~~D~d  538 (586)
                      +.+||..++..++.... .+++..+|..+|.|++|.|+++||..++..                .  +.+..+|+.+|.|
T Consensus        81 ~~~ef~~~~~~~~~~~~-~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d  159 (190)
T 1fpw_A           81 HFEEFITVLSTTSRGTL-EEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKN  159 (190)
T ss_dssp             CHHHHHHHHHHHSCCCS-THHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTT
T ss_pred             eHHHHHHHHHHHccCCc-HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCC
Confidence            99999999998887665 788999999999999999999999998864                1  5688999999999


Q ss_pred             ccCcccHHHHHHHHHhhcccCChhhHHHHHHhhc
Q 043828          539 MMSALSIKLFKDKSMELTKSMELNKSMELKKSVE  572 (586)
Q Consensus       539 ~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d  572 (586)
                      ++|.|+.+|+..++...      ..+..++..+|
T Consensus       160 ~dG~I~~~Ef~~~~~~~------~~~~~~~~~~d  187 (190)
T 1fpw_A          160 EDGYITLDEFREGSKVD------PSIIGALNLYD  187 (190)
T ss_dssp             CSSEEEHHHHHHHHHSS------TTHHHHHHHHH
T ss_pred             CCCcCcHHHHHHHHHhC------hHHHHHHhhcc
Confidence            99999999999998653      34666676665

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=99.79  E-value=1.4e-19  Score=170.49  Aligned_cols=150  Identities=18%  Similarity=0.314  Sum_probs=126.2

Q ss_pred             cCCchhhHhHHHHhhhhccC-----CC-C--CCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCc-ccHhHHHhhh
Q 043828          379 DNLPQDQMAQIKQMFYMMDT-----DK-N--GDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGL-LSCDEFVTMS  449 (586)
Q Consensus       379 ~~l~~~~~~~~~~~F~~~D~-----~~-~--G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~-i~~~eF~~~~  449 (586)
                      ..++.++++.+.++|..+|.     |+ +  |.|+.+||.. +..+|.++..   .++|+.+|.|++|. |+|+||+.++
T Consensus        43 t~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~lg~~~~~---~~lf~~~D~d~dG~~I~f~EF~~~~  118 (214)
T 2l4h_A           43 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFK---ERICRVFSTSPAKDSLSFEDFLDLL  118 (214)
T ss_dssp             CSCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHHHTSTTH---HHHHHHHCCSSSCCSEEHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhccCCChHH---HHHHHHhCcCCCCCEecHHHHHHHH
Confidence            46788999999999999998     66 6  9999999999 8888887765   46789999999999 9999999977


Q ss_pred             hhhccC-CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCC-----CCCCHHHHH----HHHHHhcCCCCCceeHHHHH
Q 043828          450 VHLKRI-GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNA-----GPNGDQTIR----DILRDVDLDRDGRISFEEFK  519 (586)
Q Consensus       450 ~~~~~~-~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~-----~~~~~~~~~----~~~~~~d~~~dg~i~~~eF~  519 (586)
                      ...... ..++.++.+|+.||.|++|+|+.+||..++..++.     ..+ ++++.    .+|..+|.|+||.|+|+||+
T Consensus       119 ~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s-~~e~~~~~~~~~~~~D~d~dG~Is~~EF~  197 (214)
T 2l4h_A          119 SVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLS-ASEMKQLIDNILEESDIDRDGTINLSEFQ  197 (214)
T ss_dssp             HHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCS-CTHHHHHHHHHHHHHCCSCCSSBCSHHHH
T ss_pred             HHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCC-HHHHHHHHHHHHHHhCCCCCCcCCHHHHH
Confidence            654433 34668999999999999999999999999998765     333 44455    49999999999999999999


Q ss_pred             HHHhcchHHHHHHH
Q 043828          520 AMMTSGADWKMASR  533 (586)
Q Consensus       520 ~~~~~~~~~~~~F~  533 (586)
                      .++...+.+...|.
T Consensus       198 ~~~~~~p~~~~~l~  211 (214)
T 2l4h_A          198 HVISRSPDFASSFK  211 (214)
T ss_dssp             HHHHTCHHHHHHTS
T ss_pred             HHHHhChHHHHhcc
Confidence            99988776666553

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=99.78  E-value=4e-19  Score=161.47  Aligned_cols=145  Identities=17%  Similarity=0.243  Sum_probs=106.7

Q ss_pred             HHHHHHHHHhcCCCCCcccHhHHHhhhhhh-c-------cCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCC
Q 043828          423 PDVKMLMEAADVDGNGLLSCDEFVTMSVHL-K-------RIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNG  494 (586)
Q Consensus       423 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-~-------~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~  494 (586)
                      .++..+|..+| |++|.|+.+||..++... .       ...+.+.+..+|+.+|.|++|.|+.+||..++..       
T Consensus         4 ~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~-------   75 (173)
T 1alv_A            4 RQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN-------   75 (173)
T ss_dssp             HHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH-------
T ss_pred             hHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHH-------
Confidence            46777788888 888888888887766554 2       3345667777888888888888888888777763       


Q ss_pred             HHHHHHHHHHhcCCCCCceeHHHHHHHHhcc------hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHH
Q 043828          495 DQTIRDILRDVDLDRDGRISFEEFKAMMTSG------ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELK  568 (586)
Q Consensus       495 ~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~  568 (586)
                      ...+..+|..+|.|++|.|+.+||..++...      ..+..+|+.+| |++|.|+.+|+..++...      +++..++
T Consensus        76 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~~------~~~~~~F  148 (173)
T 1alv_A           76 IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVRL------DAMFRAF  148 (173)
T ss_dssp             HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHHH------HHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHH------HHHHHHH
Confidence            3557777888888888888888887777532      56677777777 888888888887776553      4677778


Q ss_pred             HhhccCCCceEecC
Q 043828          569 KSVELKKSGQLRIP  582 (586)
Q Consensus       569 ~~~d~~~dg~i~~~  582 (586)
                      +.+|+|+||.|+..
T Consensus       149 ~~~D~d~~G~i~~~  162 (173)
T 1alv_A          149 KSLDKDGTGQIQVN  162 (173)
T ss_dssp             HHHSSSCCSEEEEE
T ss_pred             HHhCCCCCCeecHh
Confidence            88888888888754

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=99.78  E-value=6.9e-19  Score=162.53  Aligned_cols=124  Identities=15%  Similarity=0.174  Sum_probs=111.2

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHH-----HHHHhcCCCCCCHH-----HHHHHHHHhcCCCCCceeHHHHHHHHhcc--
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELK-----EVLLEDNAGPNGDQ-----TIRDILRDVDLDRDGRISFEEFKAMMTSG--  525 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~-----~~l~~~~~~~~~~~-----~~~~~~~~~d~~~dg~i~~~eF~~~~~~~--  525 (586)
                      ..+++.+|+.+|+|++|.|+.+||.     .+++.+|..++ ..     ++..++..+|.|++|.|+|+||+.++...  
T Consensus        15 ~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~-~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~   93 (191)
T 1uhk_A           15 IGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPE-QAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLAT   93 (191)
T ss_dssp             HHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHH-HHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCch-hHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHHHHhc
Confidence            4568999999999999999999999     88998888765 44     68899999999999999999999887542  


Q ss_pred             -----------hHHH----HHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          526 -----------ADWK----MASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       526 -----------~~~~----~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                                 +.++    .+|+.||+|++|+|+.+||+.++..+|..+++++++.+++.+|.|+||.|++.
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~  165 (191)
T 1uhk_A           94 DELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVD  165 (191)
T ss_dssp             HHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHH
T ss_pred             chhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHH
Confidence                       1133    89999999999999999999999999999999999999999999999999974

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=99.78  E-value=3.8e-20  Score=170.36  Aligned_cols=144  Identities=13%  Similarity=0.209  Sum_probs=121.2

Q ss_pred             ccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhc------CCCCCHHHHHHH---------HHHhcCCCCCcccH
Q 043828          378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI------GQKVSDPDVKML---------MEAADVDGNGLLSC  442 (586)
Q Consensus       378 ~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~------~~~~~~~~~~~~---------~~~~D~d~dg~i~~  442 (586)
                      ...++++++++++++|..+|.|++|.|+.+||..++..+      |..++.+++..+         |+.+|.|++|.|+|
T Consensus         5 ~~~l~~~~~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~   84 (186)
T 2hps_A            5 TESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVN   84 (186)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHH
T ss_pred             cccccHHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccH
Confidence            344567888999999999999999999999999999876      888888899988         59999999999999


Q ss_pred             hHHHhhhhhhc-cCCchhHHHHHH--hhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHH
Q 043828          443 DEFVTMSVHLK-RIGNDDILSQAF--RFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFK  519 (586)
Q Consensus       443 ~eF~~~~~~~~-~~~~~~~~~~~F--~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~  519 (586)
                      +|  .++.... .....+++..+|  ..||.|++|+|+.+||..++..+|...+ ++++..+|..+|.|+||.|+|+||+
T Consensus        85 ~E--~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~-~~~~~~~~~~~D~d~dG~i~~~ef~  161 (186)
T 2hps_A           85 AT--DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLT-DDKAITCFNTLDFNKNGQISRDEFL  161 (186)
T ss_dssp             HH--HHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCC-HHHHHHHHHHHCTTCSSEEEHHHHH
T ss_pred             HH--HHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCC-HHHHHHHHHHHcCCCCCcCcHHHHH
Confidence            99  3332221 111234566667  8889999999999999999999986655 8999999999999999999999999


Q ss_pred             HHHhc
Q 043828          520 AMMTS  524 (586)
Q Consensus       520 ~~~~~  524 (586)
                      .++..
T Consensus       162 ~~~~~  166 (186)
T 2hps_A          162 VTVND  166 (186)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98763

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=99.78  E-value=6e-19  Score=163.54  Aligned_cols=124  Identities=15%  Similarity=0.225  Sum_probs=106.5

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHH-----HHHHhcCCCCCCHH-----HHHHHHHHhcCCCCCceeHHHHHHHHhcc--
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELK-----EVLLEDNAGPNGDQ-----TIRDILRDVDLDRDGRISFEEFKAMMTSG--  525 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~-----~~l~~~~~~~~~~~-----~~~~~~~~~d~~~dg~i~~~eF~~~~~~~--  525 (586)
                      ...++++|+.+|.|++|+|+.+||.     .+++.+|..++ ..     ++..++..+|.|++|.|+|+||+.++...  
T Consensus        19 ~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~-~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~   97 (195)
T 1qv0_A           19 IKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPE-QTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLAT   97 (195)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHH-HHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCcc-HHHHHHHHHHHHHHHcCCCCCceEcHHHHHHHHHHHHh
Confidence            3568899999999999999999999     78888888765 44     58889999999999999999999987542  


Q ss_pred             -----------hHHH----HHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          526 -----------ADWK----MASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       526 -----------~~~~----~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                                 +.++    .+|+.||+|++|+|+.+||+.++..+|..+++++++.+++.+|.|+||.|++.
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~  169 (195)
T 1qv0_A           98 SELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVD  169 (195)
T ss_dssp             HHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHH
T ss_pred             hhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCCHH
Confidence                       1244    89999999999999999999999999999999999999999999999999974

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=99.77  E-value=1.7e-18  Score=156.08  Aligned_cols=120  Identities=13%  Similarity=0.215  Sum_probs=110.5

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCC-CCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNA-GPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWK  529 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~-~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~  529 (586)
                      ...++.+|..+|.|++|.|+.+||..+|+.+|. .++ ..++..++...    +|.|+|+||+.++...       ..++
T Consensus        24 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~-~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~~~~~~~l~   98 (166)
T 2mys_B           24 IEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVK-NEELDAMIKEA----SGPINFTVFLTMFGEKLKGADPEDVIM   98 (166)
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCC-HHHHHHHHHHC----CCCcCHHHHHHHHHHHhccCCcHHHHH
Confidence            456899999999999999999999999999998 776 88899988864    7999999999988743       6789


Q ss_pred             HHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          530 MASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       530 ~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      .+|+.||+|++|+|+.+||+.++..+|..+++++++.+++.+|.|+||.|++.
T Consensus        99 ~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~  151 (166)
T 2mys_B           99 GAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYK  151 (166)
T ss_pred             HHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHH
Confidence            99999999999999999999999999999999999999999999999999985

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=99.77  E-value=2.2e-18  Score=158.09  Aligned_cols=160  Identities=14%  Similarity=0.181  Sum_probs=126.8

Q ss_pred             cCHHHHHHHHHhcCCCCCHHHHHHHHHHhcC-CCCCcccHhHHHhhhhhhccC-CchhHHHHHHhhhcCCCCCcccHHHH
Q 043828          404 LTFEELKDGLNMIGQKVSDPDVKMLMEAADV-DGNGLLSCDEFVTMSVHLKRI-GNDDILSQAFRFFDKNQSGFIEVDEL  481 (586)
Q Consensus       404 i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~-d~dg~i~~~eF~~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~i~~~el  481 (586)
                      ++.+||..+++..  .++.+++..++..||. |++|.|+++||..++...... .....++.+|+.+|.|++|.|+.+||
T Consensus         1 l~~~el~~l~~~~--~~s~~~i~~l~~~fd~~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef   78 (183)
T 1s6c_A            1 HRPEGLEQLEAQT--NFTKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDF   78 (183)
T ss_dssp             -----CHHHHHHS--SCCHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHH
T ss_pred             CChHHHHHHHHhc--CCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHH
Confidence            4567888888765  4588899999999998 899999999999877665443 56778999999999999999999999


Q ss_pred             HHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc------------------hHHHHHHHhhhhhccCcc
Q 043828          482 KEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG------------------ADWKMASRQYSRAMMSAL  543 (586)
Q Consensus       482 ~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------------------~~~~~~F~~~D~d~~G~i  543 (586)
                      ..++..++.... .+++..+|..+|.|++|.|+++||..++...                  +.+..+|+.+|.|++|.|
T Consensus        79 ~~~~~~~~~~~~-~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i  157 (183)
T 1s6c_A           79 VTALSILLRGTV-HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIV  157 (183)
T ss_dssp             HHHHHHHHHCCH-HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEE
T ss_pred             HHHHHHHcCCCH-HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcE
Confidence            999987765544 7789999999999999999999999887542                  567889999999999999


Q ss_pred             cHHHHHHHHHhhcccCChhhHHHHHHhhc
Q 043828          544 SIKLFKDKSMELTKSMELNKSMELKKSVE  572 (586)
Q Consensus       544 ~~~el~~~~~~~g~~~~~~~~~~~~~~~d  572 (586)
                      +.+|+..++...      ..+...+..+|
T Consensus       158 ~~~Ef~~~~~~~------~~~~~~l~~~d  180 (183)
T 1s6c_A          158 TLDEFLESXQED------DNIMRSLQLFQ  180 (183)
T ss_dssp             CHHHHHHHTTSC------CHHHHHHHHHH
T ss_pred             eHHHHHHHHhcC------hHHHHHHHHhh
Confidence            999999987542      24445555444

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=99.77  E-value=1.1e-18  Score=161.29  Aligned_cols=126  Identities=18%  Similarity=0.275  Sum_probs=111.3

Q ss_pred             cCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhc-----------CCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 043828          454 RIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLED-----------NAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM  522 (586)
Q Consensus       454 ~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~-----------~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~  522 (586)
                      .......++++|+.+|.|++|.|+.+||..++..+           +..+. ..++..++..+|.|++|.|+|+||+.++
T Consensus        35 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~d~~g~i~~~ef~~~~  113 (191)
T 3khe_A           35 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQI-EAEVDHILQSVDFDRNGYIEYSEFVTVC  113 (191)
T ss_dssp             CTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHH-HHHHHHHHHHTCTTCSSSEEHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhh-HHHHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence            44556789999999999999999999999999876           44444 7789999999999999999999999988


Q ss_pred             hcc------hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          523 TSG------ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       523 ~~~------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      ...      +.++.+|+.+|.|++|+|+.+|++.++.  |..+++++++.+++.+|.|+||.|++.
T Consensus       114 ~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~~~~~~~~~~~~~~~~D~~~dg~i~~~  177 (191)
T 3khe_A          114 MDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRLFG--VTEVDDETWHQVLQECDKNNDGEVDFE  177 (191)
T ss_dssp             SCHHHHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT--SSCCCHHHHHHHHHHHCTTCSSSEEHH
T ss_pred             HHhcccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc--cCCCCHHHHHHHHHHhCCCCCCCCCHH
Confidence            543      6789999999999999999999999988  888999999999999999999999874

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=99.77  E-value=1.3e-18  Score=157.61  Aligned_cols=111  Identities=12%  Similarity=0.103  Sum_probs=96.6

Q ss_pred             cCCCCCcccHHHHHHHHHhc------CCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhhhhhccCc
Q 043828          469 DKNQSGFIEVDELKEVLLED------NAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSA  542 (586)
Q Consensus       469 D~d~~G~i~~~el~~~l~~~------~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~  542 (586)
                      +.|++|+|+.+||+.+|+.+      |..++ .++++.++..+|.|++|.|+|+||+.++.....++.+|+.|| |++|+
T Consensus        14 ~~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~-~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~~~l~~aF~~fD-d~~G~   91 (174)
T 2i7a_A           14 LVPRGSDIDATQLQGLLNQELLTGPPGDMFS-LDECRSLVALMELKVNGRLDQEEFARLWKRLVHYQHVFQKVQ-TSPGV   91 (174)
T ss_dssp             SCC-CCCEEHHHHHHHHHHHHC-----CCCC-HHHHHHHHHHHCSSCSSEECHHHHHHHHHHHHHHHHHHHHHC-SBTTB
T ss_pred             cCCCCCcCCHHHHHHHHHHHHhccCCCCCCC-HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHHHHHHHHhc-CCCCc
Confidence            57889999999999999887      44444 788999999999999999999999998887788999999999 99999


Q ss_pred             ccHHHHHHHHHhh----cccCChhhHHHHHHhhccCCCceEecC
Q 043828          543 LSIKLFKDKSMEL----TKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       543 i~~~el~~~~~~~----g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      |+.+||+.++..+    |..+++++++.|++.+| |+||.|++.
T Consensus        92 I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~  134 (174)
T 2i7a_A           92 LLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFP  134 (174)
T ss_dssp             EEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHH
T ss_pred             CCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHH
Confidence            9999999999988    88899999999999999 999998864

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=99.77  E-value=1.5e-18  Score=157.90  Aligned_cols=122  Identities=15%  Similarity=0.205  Sum_probs=102.6

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHH----HHHhcCCCCCCHHHHH-----------HHHHHhcCCCCCceeHHHHHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKE----VLLEDNAGPNGDQTIR-----------DILRDVDLDRDGRISFEEFKAMM  522 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~----~l~~~~~~~~~~~~~~-----------~~~~~~d~~~dg~i~~~eF~~~~  522 (586)
                      ...++++|+.+|.|++|+|+.+||..    +++.+|..+. ..++.           .++..+|.|++|.|+|+||+.++
T Consensus         6 ~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~-~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~~~~   84 (176)
T 1nya_A            6 SDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAG-AAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVT   84 (176)
T ss_dssp             HHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSS-SHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCC-cHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence            35688889999999999999999988    6777888776 45454           78888899999999999998887


Q ss_pred             hcc--------------hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          523 TSG--------------ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       523 ~~~--------------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      ...              ..++.+|+.||+|++|+|+.+||+.++..+|  +++++++.+++.+|.|+||.|++.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g--~~~~~~~~~~~~~D~d~dg~i~~~  156 (176)
T 1nya_A           85 ENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNGELSLD  156 (176)
T ss_dssp             HHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSEEEHH
T ss_pred             HHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC--CCHHHHHHHHHHhCCCCCCCCcHH
Confidence            542              3378899999999999999999999998888  889999999999999999999874

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=99.77  E-value=2e-18  Score=157.95  Aligned_cols=120  Identities=20%  Similarity=0.188  Sum_probs=109.2

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-----hHHHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-----ADWKMAS  532 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-----~~~~~~F  532 (586)
                      ...++++|+.+|+|++|.|+.+||..+|+.+|..   ..++..++..+|.|++|.|+|+||+.++...     +.++.+|
T Consensus        38 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~---~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~F  114 (180)
T 3mse_B           38 IKYINELFYKLDTNHNGSLSHREIYTVLASVGIK---KWDINRILQALDINDRGNITYTEFMAGCYRWKNIESTFLKAAF  114 (180)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCC---HHHHHHHHHHHCTTCCSEECHHHHHHHHSCCTTC--CHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC---HHHHHHHHHHhCCCCCCcCcHHHHHHHHHhcccCCHHHHHHHH
Confidence            4679999999999999999999999999998854   6789999999999999999999999998754     5799999


Q ss_pred             HhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCC--------ceEecC
Q 043828          533 RQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKS--------GQLRIP  582 (586)
Q Consensus       533 ~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~d--------g~i~~~  582 (586)
                      +.||+|++|+|+.+||+.++.  +..+++++++.+++.+|.|+|        |+|++.
T Consensus       115 ~~~D~d~~G~I~~~El~~~l~--~~~~~~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~  170 (180)
T 3mse_B          115 NKIDKDEDGYISKSDIVSLVH--DKVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQ  170 (180)
T ss_dssp             HHHCTTCSSCBCHHHHHHHTT--TSSCCHHHHHHHHHHHHTC---------CCCBCHH
T ss_pred             HHHCCCCCCCCCHHHHHHHHc--CCCCCHHHHHHHHHHhhhccCcccccccCCeeeHH
Confidence            999999999999999999998  678999999999999999999        999874

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=99.76  E-value=7.4e-19  Score=164.88  Aligned_cols=122  Identities=13%  Similarity=0.103  Sum_probs=109.8

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCC--CCCCHHHHHHHH-------HHhcCCCCCceeHHHHHHHHh-----
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNA--GPNGDQTIRDIL-------RDVDLDRDGRISFEEFKAMMT-----  523 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~--~~~~~~~~~~~~-------~~~d~~~dg~i~~~eF~~~~~-----  523 (586)
                      ..+++++|..+|.|++|.|+.+||..+++.+|.  .++ .+++..++       ..+|.|++|.|+|+||+.++.     
T Consensus        35 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~-~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~~~~~~  113 (208)
T 2hpk_A           35 LSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNAT-DEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEA  113 (208)
T ss_dssp             -CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCC-HHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCC-HHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhh
Confidence            356899999999999999999999999998887  666 88899999       999999999999999999875     


Q ss_pred             ----cc-------hH-HHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          524 ----SG-------AD-WKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       524 ----~~-------~~-~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                          ..       .+ ++.+|+.||+|++|+|+.+||+.++..+|  +++++++.+++.+|.|+||.|++.
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dG~I~~~  182 (208)
T 2hpk_A          114 ERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD--VPQEAAYTFFEKADTDKSGKLERT  182 (208)
T ss_dssp             HHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT--SCTTHHHHHHHHHCTTCCSSBCHH
T ss_pred             hhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--cCHHHHHHHHHHhCCCCCCcCcHH
Confidence                11       22 78899999999999999999999999998  899999999999999999999874

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=99.76  E-value=2.2e-18  Score=159.17  Aligned_cols=121  Identities=12%  Similarity=0.106  Sum_probs=87.2

Q ss_pred             hHHHHHHhhh-cCCCCCcccHHHHHHHHHhc----CCCCCCHHHHHHHH-----------HHhcCCCCCceeHHHHHHHH
Q 043828          459 DILSQAFRFF-DKNQSGFIEVDELKEVLLED----NAGPNGDQTIRDIL-----------RDVDLDRDGRISFEEFKAMM  522 (586)
Q Consensus       459 ~~~~~~F~~~-D~d~~G~i~~~el~~~l~~~----~~~~~~~~~~~~~~-----------~~~d~~~dg~i~~~eF~~~~  522 (586)
                      ++++.+|+.+ |.|++|+|+.+||..++..+    |..+. ..++..++           ..+|.|+||.|+|+||+.++
T Consensus        12 ~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~-~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~   90 (191)
T 2ccm_A           12 NKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTD-GKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMW   90 (191)
T ss_dssp             HHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTT-SHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred             HHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCC-CHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHHH
Confidence            4567777777 77777777777777777766    65555 45566666           77777777777777777665


Q ss_pred             hcc---------------hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          523 TSG---------------ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       523 ~~~---------------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      ...               ..++.+|+.+|+|++|+|+.+|++.++..+|  +++++++.+++.+|.|+||.|++.
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g--~~~~~~~~~~~~~D~d~dG~i~~~  163 (191)
T 2ccm_A           91 AECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG--IPKSDCDAAFDTLSDGGKTMVTRE  163 (191)
T ss_dssp             HHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT--CCHHHHHHHHHHHTTTTTSCCBHH
T ss_pred             HHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC--CCHHHHHHHHHHhCCCCCCCcCHH
Confidence            432               3466777777777777777777777777776  677777777777777777777753

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=99.76  E-value=2.4e-18  Score=155.35  Aligned_cols=139  Identities=15%  Similarity=0.196  Sum_probs=86.0

Q ss_pred             HHHhcCCCCCcccHhHHHhhhhhhcc-----CCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHH
Q 043828          429 MEAADVDGNGLLSCDEFVTMSVHLKR-----IGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILR  503 (586)
Q Consensus       429 ~~~~D~d~dg~i~~~eF~~~~~~~~~-----~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~  503 (586)
                      |..+|.|++|.|+.+||..++.....     ..+.+++..+|+.+|.|++|.|+.+||..++..       ...+..+|.
T Consensus         7 F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~-------~~~~~~~F~   79 (167)
T 1gjy_A            7 YFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV-------LNGWRQHFI   79 (167)
T ss_dssp             HHHHHCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHH-------HHHHHHHHH
T ss_pred             HHHHHcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-------HHHHHHHHH
Confidence            55666666666666666665554332     234556666666666666666666666666653       244666666


Q ss_pred             HhcCCCCCceeHHHHHHHHhcc------hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCc
Q 043828          504 DVDLDRDGRISFEEFKAMMTSG------ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSG  577 (586)
Q Consensus       504 ~~d~~~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg  577 (586)
                      .+|.|++|.|+.+||..++...      +.+..+|+.+  |++|.|+.+|+..++...      +++..+++.+|+|++|
T Consensus        80 ~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G  151 (167)
T 1gjy_A           80 SFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVKL------RALTDSFRRRDSAQQG  151 (167)
T ss_dssp             HHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHHH------HHHHHHHHHHCTTCCS
T ss_pred             HhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHHH------HHHHHHHHHhCCCCCe
Confidence            6666666666666666666532      4455666666  666666666666665543      4566666666777777


Q ss_pred             eEecC
Q 043828          578 QLRIP  582 (586)
Q Consensus       578 ~i~~~  582 (586)
                      .|++.
T Consensus       152 ~i~~~  156 (167)
T 1gjy_A          152 MVNFS  156 (167)
T ss_dssp             EEEEE
T ss_pred             eEEee
Confidence            76653

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=99.76  E-value=1.2e-18  Score=161.67  Aligned_cols=120  Identities=13%  Similarity=0.211  Sum_probs=111.3

Q ss_pred             chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHH
Q 043828          457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWK  529 (586)
Q Consensus       457 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~  529 (586)
                      ....++.+|..||.|++|+|+.+||..+|+.+|..++ ..++..++..+    +|.|+|+||+.++...       ..+.
T Consensus        55 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~-~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~~~~l~  129 (196)
T 3dtp_E           55 QVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCT-EQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDEEDVIV  129 (196)
T ss_dssp             THHHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCC-HHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSCCHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCC-HHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCCcHHHHH
Confidence            3467999999999999999999999999999998877 88899998877    8999999999998642       6799


Q ss_pred             HHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          530 MASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       530 ~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      .+|+.||+|++|+|+.+||+.++ .+|..++++++..|+..+|.|+||.|++.
T Consensus       130 ~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~  181 (196)
T 3dtp_E          130 NAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIK  181 (196)
T ss_dssp             HHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHH
T ss_pred             HHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHH
Confidence            99999999999999999999999 99999999999999999999999999874

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=99.76  E-value=1.5e-18  Score=162.09  Aligned_cols=124  Identities=17%  Similarity=0.194  Sum_probs=111.5

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc------hHHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG------ADWKMA  531 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~~~~  531 (586)
                      ...++++|+.+|+|++|.|+.+||..+|+.+|.... ..++..++..+|.|++|.|+|+||+.++...      ..++.+
T Consensus        36 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~-~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~~~~~  114 (204)
T 3e3r_A           36 IQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLD-QAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAA  114 (204)
T ss_dssp             ----CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCC-HHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCC-HHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHHHHHH
Confidence            456889999999999999999999999999998877 8899999999999999999999999998754      568999


Q ss_pred             HHhhhhhccCcccHHHHHHHHH-------hhcccCChhhHHHHHHhhcc-CCCceEecC
Q 043828          532 SRQYSRAMMSALSIKLFKDKSM-------ELTKSMELNKSMELKKSVEL-KKSGQLRIP  582 (586)
Q Consensus       532 F~~~D~d~~G~i~~~el~~~~~-------~~g~~~~~~~~~~~~~~~d~-~~dg~i~~~  582 (586)
                      |+.||+|++|+|+.+||+.++.       ..|...++++++.+++.+|. |+||.|++.
T Consensus       115 F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~  173 (204)
T 3e3r_A          115 FAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLA  173 (204)
T ss_dssp             HHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHH
T ss_pred             HHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHH
Confidence            9999999999999999999997       45677888999999999999 999999974

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=99.76  E-value=1.7e-18  Score=154.35  Aligned_cols=119  Identities=16%  Similarity=0.335  Sum_probs=109.1

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKM  530 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~  530 (586)
                      ...++.+|..+|.|++|.|+.+||..+|+.+|..++ ..++..++.    +++|.|+|+||+.++...       ..++.
T Consensus        17 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~-~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~   91 (156)
T 1wdc_B           17 IQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPD-DKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTDSEETIRN   91 (156)
T ss_dssp             HHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCC-HHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCCCHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCC-HHHHHHHHH----hCCCcCcHHHHHHHHHHHhcCCChHHHHHH
Confidence            356899999999999999999999999999998877 788888875    478999999999988642       67999


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +|+.||+|++|+|+.+||+.++..+|..+++++++.+++.+|.| ||.|++.
T Consensus        92 ~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~  142 (156)
T 1wdc_B           92 AFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYV  142 (156)
T ss_dssp             HHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHH
T ss_pred             HHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHH
Confidence            99999999999999999999999999999999999999999999 9999974

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=99.76  E-value=1.6e-18  Score=156.14  Aligned_cols=138  Identities=11%  Similarity=0.153  Sum_probs=67.8

Q ss_pred             HHHhcCCCCCcccHhHHHhhhhhhcc-----CCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHH
Q 043828          429 MEAADVDGNGLLSCDEFVTMSVHLKR-----IGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILR  503 (586)
Q Consensus       429 ~~~~D~d~dg~i~~~eF~~~~~~~~~-----~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~  503 (586)
                      |..+|.|++|.|+.+||..++.....     ..+..++..+|+.+|.|++|.|+.+||..++..       ...+..+|.
T Consensus         5 F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~-------~~~~~~~F~   77 (165)
T 1k94_A            5 YFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA-------LNAWKENFM   77 (165)
T ss_dssp             HHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH-------HHHHHHHHH
T ss_pred             HHHHhCCCCCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH-------HHHHHHHHH
Confidence            44455555555555555544433322     223444555555555555555555555554432       233445555


Q ss_pred             HhcCCCCCceeHHHHHHHHhcc------hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCc
Q 043828          504 DVDLDRDGRISFEEFKAMMTSG------ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSG  577 (586)
Q Consensus       504 ~~d~~~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg  577 (586)
                      .+|.|++|.|+.+||..++...      +.+..+|..+  |++|.|+.+|+..++...      +++..+++.+|+|++|
T Consensus        78 ~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G  149 (165)
T 1k94_A           78 TVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVKL------RALTDFFRKRDHLQQG  149 (165)
T ss_dssp             HHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHHH------HHHHHHHHTTCTTCCS
T ss_pred             HhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCCCCC
Confidence            5555555555555555544321      3344444444  455555555555544433      3445555555555555


Q ss_pred             eEec
Q 043828          578 QLRI  581 (586)
Q Consensus       578 ~i~~  581 (586)
                      .|+.
T Consensus       150 ~i~~  153 (165)
T 1k94_A          150 SANF  153 (165)
T ss_dssp             EEEE
T ss_pred             eEee
Confidence            5543

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=99.76  E-value=7e-20  Score=173.32  Aligned_cols=148  Identities=17%  Similarity=0.172  Sum_probs=118.2

Q ss_pred             CCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHh-cCCCCCCHHHHHHHHHHh-------
Q 043828          434 VDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLE-DNAGPNGDQTIRDILRDV-------  505 (586)
Q Consensus       434 ~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~~~~~~~-------  505 (586)
                      .++++.++++++...+...........++.+|+.+|.|++|+|+.+||..+|.. +|..+. ..++..++..+       
T Consensus        23 ~~~~~~~~~~~l~~~~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~-~~~~~~~~~~~~~~~~~~  101 (219)
T 3cs1_A           23 KAKDRKEAWERIRQAIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEF-TSRVRDITKRAFDKSRTL  101 (219)
T ss_dssp             CHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGT-CSCHHHHHHHHHHHHHHH
T ss_pred             hHHhHHHHHHHHHHHhcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCcc-HHHHHHHHHHHHHHHHhh
Confidence            345567777777654332222233457899999999999999999999999987 677655 34455544432       


Q ss_pred             --cCCCCCceeHHHHHHHHhcc------hHHHHHHHhhhhhccCcccHHHHHHHHHhhcc-cCChhhHHHHHHhhccCCC
Q 043828          506 --DLDRDGRISFEEFKAMMTSG------ADWKMASRQYSRAMMSALSIKLFKDKSMELTK-SMELNKSMELKKSVELKKS  576 (586)
Q Consensus       506 --d~~~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~-~~~~~~~~~~~~~~d~~~d  576 (586)
                        +.|++|.|+|+||+.++...      ..++.+|+.||+|++|+|+.+||+.++..+|. .+++++++.+|+.+|.|+|
T Consensus       102 ~~~~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~~~D~d~d  181 (219)
T 3cs1_A          102 GSKLENKGSEDFVEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGT  181 (219)
T ss_dssp             HHHHHTSCCCSSBCHHHHHHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHHHHHHCTTSS
T ss_pred             hhccCCCCcCCHHHHHHHHHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHHHHHhCCCCC
Confidence              34889999999999876432      56899999999999999999999999999998 8999999999999999999


Q ss_pred             ceEecC
Q 043828          577 GQLRIP  582 (586)
Q Consensus       577 g~i~~~  582 (586)
                      |.|++.
T Consensus       182 G~I~~~  187 (219)
T 3cs1_A          182 GSVTFD  187 (219)
T ss_dssp             SEEEHH
T ss_pred             CcEeHH
Confidence            999974

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=99.76  E-value=2.6e-18  Score=152.82  Aligned_cols=120  Identities=18%  Similarity=0.254  Sum_probs=108.6

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKM  530 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~  530 (586)
                      ...++++|+.+|.|++|.|+.+|| ..+..++..+    ++..++..+|.|++|.|+|+||+.++...       ..++.
T Consensus         5 ~~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~~----~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~   79 (155)
T 3ll8_B            5 IKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNP----LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRF   79 (155)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTCT----THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHH
T ss_pred             HHHHHHHHHHhCcCCCCeEcHHHH-HHhhccccch----HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHH
Confidence            356899999999999999999999 6677777554    58899999999999999999999998754       67999


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHh-hcccCChhhHHHHHHh----hccCCCceEecC
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSME-LTKSMELNKSMELKKS----VELKKSGQLRIP  582 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~-~g~~~~~~~~~~~~~~----~d~~~dg~i~~~  582 (586)
                      +|+.||+|++|+|+.+||+.++.. +|..++++++..+++.    +|.|+||+|++.
T Consensus        80 ~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~  136 (155)
T 3ll8_B           80 AFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFE  136 (155)
T ss_dssp             HHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHH
T ss_pred             HHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHH
Confidence            999999999999999999999999 6999999999999999    999999999874

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=99.76  E-value=5.8e-19  Score=164.77  Aligned_cols=120  Identities=14%  Similarity=0.156  Sum_probs=103.9

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc------------
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG------------  525 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------------  525 (586)
                      ...++++|..+|.|++|+|+.+||..+ ..+|..+.    +..++..+|.|++|.|+|+||+.++...            
T Consensus        28 ~~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~----~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~  102 (202)
T 2bec_A           28 LLRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL----GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQD  102 (202)
T ss_dssp             HHHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT----HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHHHC---
T ss_pred             HHHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc----HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhcccccc
Confidence            345778888888888888888888887 77776543    7788888888888889999988887532            


Q ss_pred             -----------hHHHHHHHhhhhhccCcccHHHHHHHHHhh-cccCChhhHHHHHHh----hccCCCceEecC
Q 043828          526 -----------ADWKMASRQYSRAMMSALSIKLFKDKSMEL-TKSMELNKSMELKKS----VELKKSGQLRIP  582 (586)
Q Consensus       526 -----------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~-g~~~~~~~~~~~~~~----~d~~~dg~i~~~  582 (586)
                                 ..++.+|+.||+|++|+|+.+||+.++..+ |..+++++++.+++.    +|.|+||.|++.
T Consensus       103 ~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~  175 (202)
T 2bec_A          103 PKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFV  175 (202)
T ss_dssp             --CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHH
T ss_pred             cccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHH
Confidence                       458999999999999999999999999999 999999999999999    999999999974

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=99.76  E-value=2.7e-18  Score=154.51  Aligned_cols=122  Identities=14%  Similarity=0.135  Sum_probs=105.2

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHH----HhcCCCCCCHHHHHH-----------HHHHhcCCCCCceeHHHHHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVL----LEDNAGPNGDQTIRD-----------ILRDVDLDRDGRISFEEFKAMM  522 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l----~~~~~~~~~~~~~~~-----------~~~~~d~~~dg~i~~~eF~~~~  522 (586)
                      .++++.+|+.+|.|++|.|+.+||..++    +.+|..++ ..++..           ++..+|.|++|.|+|+||+.++
T Consensus         3 ~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~-~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~   81 (166)
T 3akb_A            3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAAR-SDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGA   81 (166)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTT-SHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTH
T ss_pred             HHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCC-CHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            3568899999999999999999999874    45677776 455554           4799999999999999999887


Q ss_pred             hcc-------------hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          523 TSG-------------ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       523 ~~~-------------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      ...             ..++.+|+.+|+|++|+|+.+||+.++..+|  ++++++..+++.+|.|+||.|++.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--~~~~~~~~~~~~~D~d~dg~i~~~  152 (166)
T 3akb_A           82 VKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLARQAAAALDTDGDGKVGET  152 (166)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSBCCHH
T ss_pred             HHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--CCHHHHHHHHHHhCCCCCCcCcHH
Confidence            643             1288999999999999999999999999998  899999999999999999999874

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=99.76  E-value=1.8e-18  Score=168.31  Aligned_cols=139  Identities=19%  Similarity=0.330  Sum_probs=121.9

Q ss_pred             hHhHHHHhhhhccCCCCCCcCHHHHHHHHHhc----CCCCCHHHHHH----HHHHhcCCCCCcccHhHHHhhhhh-----
Q 043828          385 QMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI----GQKVSDPDVKM----LMEAADVDGNGLLSCDEFVTMSVH-----  451 (586)
Q Consensus       385 ~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~----~~~~~~~~~~~----~~~~~D~d~dg~i~~~eF~~~~~~-----  451 (586)
                      ....++.+|..+|.|++|+|+.+||..++..+    |..++.+++..    +|+.+|.|++|.|+|+||+.++..     
T Consensus       101 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~  180 (263)
T 2f33_A          101 SCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFL  180 (263)
T ss_dssp             CHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSH
T ss_pred             HHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999988    89999998877    999999999999999999986643     


Q ss_pred             --h-ccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCC----CCCCHHHHHHHHHH-hcCCCCCceeHHHHHHHHh
Q 043828          452 --L-KRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNA----GPNGDQTIRDILRD-VDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       452 --~-~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~----~~~~~~~~~~~~~~-~d~~~dg~i~~~eF~~~~~  523 (586)
                        . ......+.++.+|+.+|+|++|+|+.+||..++..++.    ..+ ++++..++.. +|.|+||.|+|+||+.++.
T Consensus       181 ~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~~~~~~-~~e~~~~~~~~~D~d~dG~i~~~EF~~~~~  259 (263)
T 2f33_A          181 LKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELD-INNISTYKKNIMALSDGGKLYRTDLALILS  259 (263)
T ss_dssp             HHHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHCTTTCC-TTTHHHHHHHHHTTSBTTEECGGGTHHHHC
T ss_pred             HHhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhcCCCCC-HHHHHHHHHHhhccCCCCeEcHHHHHHHHh
Confidence              1 23355678999999999999999999999999988776    444 6778889887 7999999999999999987


Q ss_pred             c
Q 043828          524 S  524 (586)
Q Consensus       524 ~  524 (586)
                      .
T Consensus       260 ~  260 (263)
T 2f33_A          260 A  260 (263)
T ss_dssp             C
T ss_pred             c
Confidence            5

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.75  E-value=6.9e-18  Score=180.35  Aligned_cols=185  Identities=16%  Similarity=0.225  Sum_probs=141.4

Q ss_pred             hccCCCCCCcCHHHHHH--HHHhcCCCCCH---HHHHHHHHHhc-CCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhh
Q 043828          395 MMDTDKNGDLTFEELKD--GLNMIGQKVSD---PDVKMLMEAAD-VDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFF  468 (586)
Q Consensus       395 ~~D~~~~G~i~~~el~~--~l~~~~~~~~~---~~~~~~~~~~D-~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~  468 (586)
                      .+..|...++|.+|+..  |++........   ..+...+..+- -....++.-..+..+..........++++++|+.|
T Consensus       285 ~L~~dp~~R~t~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~a~l~~i~~~~~~~~~~~~l~~~F~~~  364 (504)
T 3q5i_A          285 MLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKL  364 (504)
T ss_dssp             HTCSSTTTSCCHHHHHTSHHHHHTCCCCCGGGHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred             HcCCChhHCCCHHHHhcCHhhhhchhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHHHHHHHee
Confidence            35667788899998854  67665444332   22333333221 13334444333333333332334456799999999


Q ss_pred             cCCCCCcccHHHHHHHHHhc--------CCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc------hHHHHHHHh
Q 043828          469 DKNQSGFIEVDELKEVLLED--------NAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG------ADWKMASRQ  534 (586)
Q Consensus       469 D~d~~G~i~~~el~~~l~~~--------~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~~~~F~~  534 (586)
                      |+|+||.|+.+||..++..+        |.... +.+++.+|..+|.|+||.|+|+||+.++...      +.++.+|+.
T Consensus       365 D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~~~~F~~  443 (504)
T 3q5i_A          365 DKNGDGQLDKKELIEGYNVLRNFKNELGELKNV-EEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNL  443 (504)
T ss_dssp             CTTCSSEECHHHHHHHHHHHHHHC--CCSCCCH-HHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHH
T ss_pred             CCCCCCeEcHHHHHHHHHHhhhccccccccccc-HHHHHHHHHHhCCCCCCcEeHHHHHHHHHhhhcccCHHHHHHHHHH
Confidence            99999999999999999887        44454 7899999999999999999999999998753      678999999


Q ss_pred             hhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          535 YSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       535 ~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      ||+|++|+|+.+||+.++..  ..+++++++++|+.+|.|+||+|++.
T Consensus       444 ~D~d~dG~Is~~El~~~l~~--~~~~~~~~~~~~~~~D~d~dG~I~~~  489 (504)
T 3q5i_A          444 FDTDKSGKITKEELANLFGL--TSISEKTWNDVLGEADQNKDNMIDFD  489 (504)
T ss_dssp             HCTTCCSEECHHHHHHHTTC--SCCCHHHHHHHHHTTCSSCSSSEEHH
T ss_pred             hcCCCCCcCcHHHHHHHHhh--CCCCHHHHHHHHHHhCCCCCCcEeHH
Confidence            99999999999999999876  45899999999999999999999975

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=99.75  E-value=2.5e-18  Score=154.92  Aligned_cols=122  Identities=22%  Similarity=0.297  Sum_probs=105.1

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc------hHHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG------ADWKMA  531 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~~~~  531 (586)
                      ...++.+|..+|.|++|.|+.+||..++..+|..++ ..++..++..+|.|++|.|+|+||+.++...      ..++.+
T Consensus        26 ~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~-~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~  104 (166)
T 2aao_A           26 IAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLK-ESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAA  104 (166)
T ss_dssp             HHHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCC-HHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHHHHTTHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhcccHHHHHHH
Confidence            356889999999999999999999999999988776 8889999999999999999999999988643      678999


Q ss_pred             HHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          532 SRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       532 F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      |+.+|.|++|+|+.+||+.++..+|  +++++++.+++.+|.|+||.|++.
T Consensus       105 F~~~D~d~~G~i~~~e~~~~l~~~~--~~~~~~~~~~~~~d~~~dg~i~~~  153 (166)
T 2aao_A          105 FTYFDKDGSGYITPDELQQACEEFG--VEDVRIEELMRDVDQDNDGRIDYN  153 (166)
T ss_dssp             HHHHCTTCSSSBCHHHHHHHTCC----------CCHHHHHCTTCSSSBCHH
T ss_pred             HHHhCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHhCCCCCCcEeHH
Confidence            9999999999999999999998887  678899999999999999999874

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=99.75  E-value=2.8e-18  Score=159.56  Aligned_cols=117  Identities=18%  Similarity=0.271  Sum_probs=55.2

Q ss_pred             HHHHHhhhcCCCCCcccHHHHHHHHHhcCCC----CCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhhh
Q 043828          461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAG----PNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYS  536 (586)
Q Consensus       461 ~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~----~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D  536 (586)
                      +++ |..+|+|++|.|+.+||..+|+.+|..    ..+..++..++..+|.|++|.|+|+||+.++.....++.+|+.||
T Consensus        35 l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~~~~~~~F~~~D  113 (198)
T 1juo_A           35 LYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFD  113 (198)
T ss_dssp             THH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHHHHHHHhC
Confidence            444 444444445555555554444444431    112444444444444444445555555444444444444455555


Q ss_pred             hhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEe
Q 043828          537 RAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLR  580 (586)
Q Consensus       537 ~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~  580 (586)
                      +|++|+|+.+||+.++..+|..+++++++.+++.+  |+||+|+
T Consensus       114 ~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~  155 (198)
T 1juo_A          114 TDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKIT  155 (198)
T ss_dssp             TTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEE
T ss_pred             CCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEc
Confidence            55555555555544444444444444444444444  4444444

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=99.75  E-value=6e-18  Score=160.42  Aligned_cols=152  Identities=14%  Similarity=0.177  Sum_probs=125.5

Q ss_pred             CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCC-CCCcccHhHHHhhhhhhccC-CchhHHHHHHhhhcCCCCCccc
Q 043828          400 KNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVD-GNGLLSCDEFVTMSVHLKRI-GNDDILSQAFRFFDKNQSGFIE  477 (586)
Q Consensus       400 ~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d-~dg~i~~~eF~~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~i~  477 (586)
                      ..+.++.+++..++...+  ++.++++.+++.||.+ ++|.|+++||..++...... .....++.+|+.+|.|++|.|+
T Consensus        30 ~~~~l~~~~l~~l~~~~~--~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~  107 (224)
T 1s1e_A           30 TMVCHRPEGLEQLEAQTN--FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVK  107 (224)
T ss_dssp             --------CHHHHHHHSS--CCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBC
T ss_pred             CccCCCHHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEe
Confidence            457899999999988865  7899999999999984 99999999999987665433 5677899999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc------------------hHHHHHHHhhhhhc
Q 043828          478 VDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG------------------ADWKMASRQYSRAM  539 (586)
Q Consensus       478 ~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------------------~~~~~~F~~~D~d~  539 (586)
                      .+||..++..++.... .+++..+|..+|.|++|.|+++||..++...                  +.+..+|+.+|.|+
T Consensus       108 ~~Ef~~~l~~~~~~~~-~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~  186 (224)
T 1s1e_A          108 FEDFVTALSILLRGTV-HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNK  186 (224)
T ss_dssp             HHHHHHHHHHHHHCCH-HHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHHHHHccCCH-HHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCC
Confidence            9999999987765544 7789999999999999999999999887532                  56889999999999


Q ss_pred             cCcccHHHHHHHHHh
Q 043828          540 MSALSIKLFKDKSME  554 (586)
Q Consensus       540 ~G~i~~~el~~~~~~  554 (586)
                      +|.|+.+|+..++..
T Consensus       187 dG~Is~~EF~~~~~~  201 (224)
T 1s1e_A          187 DGIVTLDEFLESCQE  201 (224)
T ss_dssp             SSCEEHHHHHHHHHT
T ss_pred             CCcEeHHHHHHHHHh
Confidence            999999999998764

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=99.75  E-value=3.2e-18  Score=157.00  Aligned_cols=130  Identities=16%  Similarity=0.189  Sum_probs=61.8

Q ss_pred             HHHHHHHHh-cCCCCCcccHhHHHhhhhhhc----cCCchhHHHH-----------HHhhhcCCCCCcccHHHHHHHHHh
Q 043828          424 DVKMLMEAA-DVDGNGLLSCDEFVTMSVHLK----RIGNDDILSQ-----------AFRFFDKNQSGFIEVDELKEVLLE  487 (586)
Q Consensus       424 ~~~~~~~~~-D~d~dg~i~~~eF~~~~~~~~----~~~~~~~~~~-----------~F~~~D~d~~G~i~~~el~~~l~~  487 (586)
                      +++.+|..+ |.|+||.|+++||..++....    .......+..           +|+.+|.|++|.|+.+||..++..
T Consensus         9 ~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~   88 (185)
T 2sas_A            9 KIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWEK   88 (185)
T ss_dssp             HHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHH
Confidence            345555555 555555555555554443333    2223333332           255555555555555555555543


Q ss_pred             cCCC--------CCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc----hHHHHHHHhhhhhccCcccHHHHHHHHH
Q 043828          488 DNAG--------PNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG----ADWKMASRQYSRAMMSALSIKLFKDKSM  553 (586)
Q Consensus       488 ~~~~--------~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~----~~~~~~F~~~D~d~~G~i~~~el~~~~~  553 (586)
                      ....        ......+..+|..+|.|+||.|+++||..++...    +.+..+|+.+|.|++|.|+.+|+..++.
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~~~~~~~~~~~~~D~d~dG~i~~~ef~~~~~  166 (185)
T 2sas_A           89 TIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRYKELYY  166 (185)
T ss_dssp             HHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHHHHHHTTTTSCCSHHHHHHHHH
T ss_pred             HhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence            2111        0112344555555555555555555555554322    3445555555555555555555555443

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=99.74  E-value=6.4e-18  Score=158.32  Aligned_cols=146  Identities=16%  Similarity=0.202  Sum_probs=107.3

Q ss_pred             CCCCcccHhHHHhhhhhhcc-CCchhHHHHHHhhhcCC--CCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCC
Q 043828          435 DGNGLLSCDEFVTMSVHLKR-IGNDDILSQAFRFFDKN--QSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDG  511 (586)
Q Consensus       435 d~dg~i~~~eF~~~~~~~~~-~~~~~~~~~~F~~~D~d--~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg  511 (586)
                      |+.|.|+.+|+..+.....- ......++.+|..+|.|  ++|.|+.+||..+|.. ..... +..+..+|..+|.|++|
T Consensus        12 ~~~g~l~~~el~~l~~~~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~-~~~~~~~f~~~D~d~~g   89 (207)
T 2ehb_A           12 NAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRR-NLFADRIFDVFDVKRNG   89 (207)
T ss_dssp             ---------CHHHHHHHSSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCC-CHHHHHHHHHHCTTCSS
T ss_pred             ccccccCHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-ccccc-HHHHHHHHHHhcCCCCC
Confidence            56777777777665432211 11234577889999988  9999999999998875 22222 45677899999999999


Q ss_pred             ceeHHHHHHHHhcc-------hHHHHHHHhhhhhccCcccHHHHHHHHH----hhcccCChhhHHHHH----HhhccCCC
Q 043828          512 RISFEEFKAMMTSG-------ADWKMASRQYSRAMMSALSIKLFKDKSM----ELTKSMELNKSMELK----KSVELKKS  576 (586)
Q Consensus       512 ~i~~~eF~~~~~~~-------~~~~~~F~~~D~d~~G~i~~~el~~~~~----~~g~~~~~~~~~~~~----~~~d~~~d  576 (586)
                      .|+|+||+.++...       +.++.+|+.||+|++|+|+.+||+.++.    .+|..+++++++.++    +.+|.|+|
T Consensus        90 ~i~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~d  169 (207)
T 2ehb_A           90 VIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKND  169 (207)
T ss_dssp             EECHHHHHHHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCS
T ss_pred             eEeHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCC
Confidence            99999999888743       4588999999999999999999999885    568889999887766    48999999


Q ss_pred             ceEecC
Q 043828          577 GQLRIP  582 (586)
Q Consensus       577 g~i~~~  582 (586)
                      |.|++.
T Consensus       170 G~I~~~  175 (207)
T 2ehb_A          170 GKIDID  175 (207)
T ss_dssp             SEECHH
T ss_pred             CcCcHH
Confidence            999874

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=99.74  E-value=2.2e-18  Score=172.24  Aligned_cols=131  Identities=23%  Similarity=0.389  Sum_probs=119.9

Q ss_pred             hhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHH-HHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHH
Q 043828          384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKM-LMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILS  462 (586)
Q Consensus       384 ~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~-~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~  462 (586)
                      .....+..+|..+|.|++|+|+.+||..+|  +|..++..++.. +|..+|.|++|.|+|+||+.++....      .+.
T Consensus       185 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~------~l~  256 (323)
T 1ij5_A          185 NDLAALVADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL------VLR  256 (323)
T ss_dssp             HHHHTSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH------HHH
T ss_pred             hHHHHHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH------HHH
Confidence            456788999999999999999999999999  788899999999 99999999999999999998765544      699


Q ss_pred             HHHhhhcCCCCCcccHHHHHHHH-HhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          463 QAFRFFDKNQSGFIEVDELKEVL-LEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       463 ~~F~~~D~d~~G~i~~~el~~~l-~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      .+|+.||.|++|+|+.+||..+| ..+|...+ ++++..+|..+|.|+||.|+|+||+.++.
T Consensus       257 ~~F~~~D~d~dG~Is~~El~~~l~~~~g~~ls-~~e~~~l~~~~D~d~dG~Is~~EF~~~~~  317 (323)
T 1ij5_A          257 ILYAFADFDKSGQLSKEEVQKVLEDAHIPESA-RKKFEHQFSVVDVDDSKSLSYQEFVMLVL  317 (323)
T ss_dssp             HHHHHTCSSSCSSEEHHHHHHHHHHTTCCGGG-CSTHHHHHHHHTTTTCSEECHHHHHHHHH
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHHHHcCCCCC-HHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence            99999999999999999999999 88886655 66799999999999999999999999876

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=99.74  E-value=5.2e-18  Score=146.60  Aligned_cols=117  Identities=17%  Similarity=0.200  Sum_probs=98.1

Q ss_pred             HHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh----cc-----hHHHHH
Q 043828          461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT----SG-----ADWKMA  531 (586)
Q Consensus       461 ~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~----~~-----~~~~~~  531 (586)
                      ++++|..+|+|++|.|+.+||..++..++..++ ..++..++..+|.|++|.|+++||+.++.    ..     ..++.+
T Consensus         2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~-~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~   80 (134)
T 1jfj_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKN-EQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVL   80 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSH-HHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCC-HHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHH
Confidence            577888999999999999999988888876665 77888889999999999999999988884    11     558889


Q ss_pred             HHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          532 SRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       532 F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      |+.+|+|++|+|+.+|++.++..+|..+    +..+++.+|.|+||.|++.
T Consensus        81 f~~~D~d~~G~i~~~e~~~~l~~~~~~~----~~~~~~~~D~~~dg~i~~~  127 (134)
T 1jfj_A           81 YKLMDVDGDGKLTKEEVTSFFKKHGIEK----VAEQVMKADANGDGYITLE  127 (134)
T ss_dssp             HHHHCCSSSSEEEHHHHHHHHTTTTCHH----HHHHHHHHHCSSSSEEEHH
T ss_pred             HHHHCCCCCCccCHHHHHHHHHHhCHHH----HHHHHHHhCCCCCCcEeHH
Confidence            9999999999999999999888877644    8888999999999998864

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=99.74  E-value=2.8e-18  Score=167.89  Aligned_cols=174  Identities=17%  Similarity=0.241  Sum_probs=136.2

Q ss_pred             CCchhhHhHH-HHhhhhccCCCCCCcCHHHHHHH-----------HHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHh
Q 043828          380 NLPQDQMAQI-KQMFYMMDTDKNGDLTFEELKDG-----------LNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVT  447 (586)
Q Consensus       380 ~l~~~~~~~~-~~~F~~~D~~~~G~i~~~el~~~-----------l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~  447 (586)
                      .++.+++..+ .++|..+|.|++|.|+.+||..+           +...+...+.+++..+|..+|.|++|.|+.+||..
T Consensus        49 ~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~  128 (272)
T 2be4_A           49 KITDERVQQIKKSFMSAYDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKN  128 (272)
T ss_dssp             CCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHHSCHHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHH
T ss_pred             CCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHHhhhhHHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHH
Confidence            4455565554 45779999999999999999998           55667778889999999999999999999999998


Q ss_pred             hhhhh----ccCCchhHH----HHHHhhhcCCCCCcccHHHHHHHHHhcC-----CC------CCCHHHHHHHHHHhcCC
Q 043828          448 MSVHL----KRIGNDDIL----SQAFRFFDKNQSGFIEVDELKEVLLEDN-----AG------PNGDQTIRDILRDVDLD  508 (586)
Q Consensus       448 ~~~~~----~~~~~~~~~----~~~F~~~D~d~~G~i~~~el~~~l~~~~-----~~------~~~~~~~~~~~~~~d~~  508 (586)
                      ++...    ....+.+++    ..+|+.+|.|++|.|+.+||..++....     ..      ......+..+|..+|.|
T Consensus       129 ~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d  208 (272)
T 2be4_A          129 FLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVS  208 (272)
T ss_dssp             HHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCCSSCSSTTSCCCHHHHHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhhhHHHHhhhhhhhccccccHHHHHHHHHHhCCC
Confidence            77654    333344444    4599999999999999999988775310     00      01246788899999999


Q ss_pred             CCCceeHHHHHHHHhcc----------hHHHH----HHHhhhhhccCcccHHHHHHHHH
Q 043828          509 RDGRISFEEFKAMMTSG----------ADWKM----ASRQYSRAMMSALSIKLFKDKSM  553 (586)
Q Consensus       509 ~dg~i~~~eF~~~~~~~----------~~~~~----~F~~~D~d~~G~i~~~el~~~~~  553 (586)
                      ++|.|+.+||..++...          ..+..    +|+.+|.|++|.|+.+|+..++.
T Consensus       209 ~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~D~d~dG~is~~EF~~~~~  267 (272)
T 2be4_A          209 RTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELALCLG  267 (272)
T ss_dssp             CCSEEETHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSTTCEEEHHHHHHHTT
T ss_pred             CCCeecHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence            99999999998887521          33444    89999999999999999998864

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=99.74  E-value=1.5e-17  Score=153.33  Aligned_cols=152  Identities=20%  Similarity=0.248  Sum_probs=130.3

Q ss_pred             CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCC-CCCcccHhHHHhhhhhh-ccCCchhHHHHHHhhhcCCCCCccc
Q 043828          400 KNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVD-GNGLLSCDEFVTMSVHL-KRIGNDDILSQAFRFFDKNQSGFIE  477 (586)
Q Consensus       400 ~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d-~dg~i~~~eF~~~~~~~-~~~~~~~~~~~~F~~~D~d~~G~i~  477 (586)
                      ..+.++.+++..+....  .++.+++..+|+.+|.+ ++|.|+++||..++... ........+..+|+.+|.|++|.|+
T Consensus         4 ~~~~l~~~~l~~l~~~~--~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~   81 (190)
T 1g8i_A            4 SNSKLKPEVVEELTRKT--YFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIE   81 (190)
T ss_dssp             CCCSCCHHHHHHHHHTS--SSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEE
T ss_pred             ccccCCHHHHHHHHHcc--CCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEe
Confidence            45678999999988865  46899999999999998 89999999999877665 2224556799999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc------------------chHHHHHHHhhhhhc
Q 043828          478 VDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS------------------GADWKMASRQYSRAM  539 (586)
Q Consensus       478 ~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~------------------~~~~~~~F~~~D~d~  539 (586)
                      .+||..++..++.... .+++..+|..+|.|++|.|+++||..++..                  .+.+..+|+.+|.|+
T Consensus        82 ~~ef~~~~~~~~~~~~-~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~  160 (190)
T 1g8i_A           82 FSEFIQALSVTSRGTL-DEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNA  160 (190)
T ss_dssp             HHHHHHHHHHHHHCCH-HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSC
T ss_pred             HHHHHHHHHHhcCCCH-HHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCC
Confidence            9999999988766554 778999999999999999999999998765                  156889999999999


Q ss_pred             cCcccHHHHHHHHHh
Q 043828          540 MSALSIKLFKDKSME  554 (586)
Q Consensus       540 ~G~i~~~el~~~~~~  554 (586)
                      +|.|+.+|+..++..
T Consensus       161 dG~i~~~ef~~~~~~  175 (190)
T 1g8i_A          161 DGKLTLQEFQEGSKA  175 (190)
T ss_dssp             SSEEEHHHHHHHHHH
T ss_pred             CCcEeHHHHHHHHHh
Confidence            999999999998765

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=99.74  E-value=6.9e-18  Score=153.22  Aligned_cols=120  Identities=12%  Similarity=0.073  Sum_probs=104.8

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcC----CCCCCHHH-H--------HHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDN----AGPNGDQT-I--------RDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~----~~~~~~~~-~--------~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ..+++++|+.+|.|++|.|+.+||..++..++    ..+. ..+ +        +.++..+|  ++|.|+|+||+.++..
T Consensus         5 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~-~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~~~   81 (174)
T 1q80_A            5 VQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAE-HAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSMKE   81 (174)
T ss_dssp             HHHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTT-HHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCC-cHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHHHH
Confidence            35688999999999999999999999999887    6666 555 5        35778888  8999999999988764


Q ss_pred             c-----------hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          525 G-----------ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       525 ~-----------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      .           ..++.+|+.||+|++|+|+.+||+.++..+|  +++++++.+++.+|.|+||.|++.
T Consensus        82 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g--~~~~~~~~~~~~~D~d~dg~i~~~  148 (174)
T 1q80_A           82 MVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--LDKTMAPASFDAIDTNNDGLLSLE  148 (174)
T ss_dssp             HTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHT--CCGGGHHHHHHHHCTTCSSSBCHH
T ss_pred             HcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcC--CCHHHHHHHHHHhCCCCCceEeHH
Confidence            3           5588999999999999999999999999886  899999999999999999999874

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=99.73  E-value=3.5e-18  Score=160.28  Aligned_cols=117  Identities=12%  Similarity=0.175  Sum_probs=81.0

Q ss_pred             HHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc----------------
Q 043828          461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS----------------  524 (586)
Q Consensus       461 ~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~----------------  524 (586)
                      ++++|..+|.|++|+|+.+||..++ .+|..+.    .+.++..+|.|++|.|+|+||+.++..                
T Consensus        31 l~~~F~~~D~d~dG~Is~~El~~~~-~lg~~~~----~~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~  105 (208)
T 2ct9_A           31 LYSRFTSLDKGENGTLSREDFQRIP-ELAINPL----GDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGP  105 (208)
T ss_dssp             HHHHHHHHCTTCSSEECTGGGGGCH-HHHTSTT----HHHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC-----------
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCc----HHHHHHHHcCCCCCcCcHHHHHHHHHhhccccchhhhcccccc
Confidence            4444555555555555555554432 3333332    123444455555555555555554431                


Q ss_pred             ------chHHHHHHHhhhhhccCcccHHHHHHHHHhh-cccCChhhHHHH----HHhhccCCCceEecC
Q 043828          525 ------GADWKMASRQYSRAMMSALSIKLFKDKSMEL-TKSMELNKSMEL----KKSVELKKSGQLRIP  582 (586)
Q Consensus       525 ------~~~~~~~F~~~D~d~~G~i~~~el~~~~~~~-g~~~~~~~~~~~----~~~~d~~~dg~i~~~  582 (586)
                            .+.++.+|+.||+|++|+|+.+||+.++..+ |..+++++++.+    ++.+|.|+||.|++.
T Consensus       106 ~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~  174 (208)
T 2ct9_A          106 EPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFT  174 (208)
T ss_dssp             CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHH
T ss_pred             cccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHH
Confidence                  2568899999999999999999999999987 999999999988    999999999999974

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.72  E-value=5.7e-18  Score=180.16  Aligned_cols=188  Identities=17%  Similarity=0.252  Sum_probs=115.4

Q ss_pred             hccCCCCCCcCHHHHHH--HHHhcCCCC-CH---HHHHHHHHHhcC-CCCCcccHhHHHhhhhhhccCCchhHHHHHHhh
Q 043828          395 MMDTDKNGDLTFEELKD--GLNMIGQKV-SD---PDVKMLMEAADV-DGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRF  467 (586)
Q Consensus       395 ~~D~~~~G~i~~~el~~--~l~~~~~~~-~~---~~~~~~~~~~D~-d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~  467 (586)
                      .+..|...++|..|+..  |++...... ..   ..+...+..+-. ....++....+..++.........++++++|+.
T Consensus       260 ~L~~dp~~R~t~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~l~~~~~~~~l~~~F~~  339 (486)
T 3mwu_A          260 MLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTEIFRK  339 (486)
T ss_dssp             HTCSSTTTSCCHHHHHHCHHHHHTCCCCCCGGGHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred             HcCCChhhCcCHHHHhcCHhhccCcccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            35567777888888754  565543221 11   112222221100 001112211122222222223345679999999


Q ss_pred             hcCCCCCcccHHHHHHHH----HhcCCCCC---------CHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc------hHH
Q 043828          468 FDKNQSGFIEVDELKEVL----LEDNAGPN---------GDQTIRDILRDVDLDRDGRISFEEFKAMMTSG------ADW  528 (586)
Q Consensus       468 ~D~d~~G~i~~~el~~~l----~~~~~~~~---------~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~  528 (586)
                      ||+|+||.|+.+||..++    +.+|..+.         .++++..+|..+|.|+||.|+|+||+..+...      +.+
T Consensus       340 ~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~  419 (486)
T 3mwu_A          340 LDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERM  419 (486)
T ss_dssp             HCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSCTTTTCCHHHH
T ss_pred             hCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHhhhccchHHHH
Confidence            999999999999995554    44455432         26789999999999999999999999988643      778


Q ss_pred             HHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          529 KMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       529 ~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +.+|+.||+|++|+|+.+||+.++..+|..+++++++++++.+|.|+||.|++.
T Consensus       420 ~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~  473 (486)
T 3mwu_A          420 ERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFN  473 (486)
T ss_dssp             HHHHHHHCSSCSSSBCSSCC--------------------CCCCSSCSSSBCHH
T ss_pred             HHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcEeHH
Confidence            999999999999999999999999999999999999999999999999999875

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=99.72  E-value=1e-17  Score=147.42  Aligned_cols=117  Identities=9%  Similarity=0.115  Sum_probs=109.2

Q ss_pred             hHHHHHHhhhcCCC-CCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHH
Q 043828          459 DILSQAFRFFDKNQ-SGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKM  530 (586)
Q Consensus       459 ~~~~~~F~~~D~d~-~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~  530 (586)
                      .+++.+|..+|.|+ +|.|+.+||..+|+.+|..++ ..++..++..+|.+    |+|+||+.++...       ..++.
T Consensus        14 ~~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~-~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~~l~~   88 (146)
T 2qac_A           14 VDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPS-SIDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNVEELIK   88 (146)
T ss_dssp             SCHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCC-HHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHHHHHH
T ss_pred             HHHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHHHHHH
Confidence            35899999999999 999999999999999998877 88999999999987    9999999998742       67999


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +|+.||+|++|+|+.+||+.++..+|..+++++++.+++.+  |+||.|++.
T Consensus        89 ~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~  138 (146)
T 2qac_A           89 MFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYK  138 (146)
T ss_dssp             HHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHH
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHH
Confidence            99999999999999999999999999999999999999999  999999975

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.72  E-value=8.6e-18  Score=179.13  Aligned_cols=125  Identities=18%  Similarity=0.288  Sum_probs=111.1

Q ss_pred             CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCC-------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc---
Q 043828          456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGP-------NGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG---  525 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~-------~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~---  525 (586)
                      ...++++++|+.||.|+||.|+.+||..+|+.++...       ..+.+++.+|..+|.|+||.|+|+||+.++...   
T Consensus       343 ~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~  422 (494)
T 3lij_A          343 EETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSL  422 (494)
T ss_dssp             HHHHHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHH
T ss_pred             HHHHHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhcc
Confidence            3456799999999999999999999999999886531       127789999999999999999999999997643   


Q ss_pred             ---hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          526 ---ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       526 ---~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                         +.++.+|+.||+|++|+|+.+||+.++..  ..+++++++++|+++|.|+||+|++.
T Consensus       423 ~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~--~~~~~~~~~~~~~~~D~d~dG~I~~~  480 (494)
T 3lij_A          423 LSKDKLESAFQKFDQDGNGKISVDELASVFGL--DHLESKTWKEMISGIDSNNDGDVDFE  480 (494)
T ss_dssp             TCHHHHHHHHHHHCTTCSSEECHHHHHHHC-C--CSCCCHHHHHHHHTTCSSSSSSEEHH
T ss_pred             ccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHHHHhCCCCCCcCCHH
Confidence               67899999999999999999999999876  67899999999999999999999975

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=99.72  E-value=4.6e-17  Score=152.10  Aligned_cols=145  Identities=17%  Similarity=0.108  Sum_probs=124.2

Q ss_pred             CCCHHHHHHHHHHhcCC-CCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHH
Q 043828          419 KVSDPDVKMLMEAADVD-GNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQT  497 (586)
Q Consensus       419 ~~~~~~~~~~~~~~D~d-~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~  497 (586)
                      .++.++++.+|..+|.| ++|.|+++||..++.........+.++.+|+.+|.|++|.|+.+||..++..++.... .++
T Consensus        18 ~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~-~~~   96 (204)
T 1jba_A           18 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTL-EHK   96 (204)
T ss_dssp             HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCC-THH
T ss_pred             CCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCH-HHH
Confidence            35677899999999999 8999999999998876665566778999999999999999999999999988876655 778


Q ss_pred             HHHHHHHhcCCCCCceeHHHHHHHHhcc-----------------------hHHHHHHHhhhhhccCcccHHHHHHHHHh
Q 043828          498 IRDILRDVDLDRDGRISFEEFKAMMTSG-----------------------ADWKMASRQYSRAMMSALSIKLFKDKSME  554 (586)
Q Consensus       498 ~~~~~~~~d~~~dg~i~~~eF~~~~~~~-----------------------~~~~~~F~~~D~d~~G~i~~~el~~~~~~  554 (586)
                      +..+|..+|.|++|.|+++||..++...                       +.+..+|+.+|.|++|.|+.+|+..++. 
T Consensus        97 ~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~-  175 (204)
T 1jba_A           97 LKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGAR-  175 (204)
T ss_dssp             HHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHT-
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH-
Confidence            9999999999999999999999887532                       4578899999999999999999999875 


Q ss_pred             hcccCChhhHHHHHHh
Q 043828          555 LTKSMELNKSMELKKS  570 (586)
Q Consensus       555 ~g~~~~~~~~~~~~~~  570 (586)
                           +.+++..++..
T Consensus       176 -----~~~~~~~~~~~  186 (204)
T 1jba_A          176 -----RDKWVMKMLQM  186 (204)
T ss_dssp             -----TTTTHHHHHHS
T ss_pred             -----cChHHHHHHHh
Confidence                 35567777764

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=99.72  E-value=7.2e-18  Score=156.77  Aligned_cols=124  Identities=15%  Similarity=0.274  Sum_probs=89.5

Q ss_pred             hHHHHHHhhhcCC-CCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc------hHHHHH
Q 043828          459 DILSQAFRFFDKN-QSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG------ADWKMA  531 (586)
Q Consensus       459 ~~~~~~F~~~D~d-~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~~~~  531 (586)
                      ++++.+|+.||.+ ++|.|+.+||..+|+.++..+....++..+|..+|.|++|.|+|+||+.++...      ..++.+
T Consensus        14 ~el~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~   93 (198)
T 2r2i_A           14 TECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWY   93 (198)
T ss_dssp             SCHHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHH
Confidence            3467777777776 678888888888777766654423457777888888888888888887776532      457777


Q ss_pred             HHhhhhhccCcccHHHHHHHHHhhc------ccCChhh-HHHHHHhhccCCCceEecC
Q 043828          532 SRQYSRAMMSALSIKLFKDKSMELT------KSMELNK-SMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       532 F~~~D~d~~G~i~~~el~~~~~~~g------~~~~~~~-~~~~~~~~d~~~dg~i~~~  582 (586)
                      |+.||.|++|+|+.+||..++..++      ..++.++ +..+++.+|.|+||.|++.
T Consensus        94 F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~  151 (198)
T 2r2i_A           94 FKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLE  151 (198)
T ss_dssp             HHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHH
T ss_pred             HHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHH
Confidence            8888888888888888888777665      4455444 7778888888888887764

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=99.71  E-value=5.3e-18  Score=159.40  Aligned_cols=126  Identities=17%  Similarity=0.236  Sum_probs=102.3

Q ss_pred             chhHHHHHHhhhcCC-CCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc------hHHH
Q 043828          457 NDDILSQAFRFFDKN-QSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG------ADWK  529 (586)
Q Consensus       457 ~~~~~~~~F~~~D~d-~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~~  529 (586)
                      +.++++++|+.||.+ ++|.|+.+||..+|+.++..+....++..+|..+|.|++|.|+|+||+.++...      +.++
T Consensus        17 s~~ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~   96 (211)
T 2ggz_A           17 PTQETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLK   96 (211)
T ss_dssp             -------CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHH
T ss_pred             CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHH
Confidence            456688899999988 899999999999998887765434568999999999999999999999888632      5788


Q ss_pred             HHHHhhhhhccCcccHHHHHHHHHhhc-----ccCChh-hHHHHHHhhccCCCceEecC
Q 043828          530 MASRQYSRAMMSALSIKLFKDKSMELT-----KSMELN-KSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       530 ~~F~~~D~d~~G~i~~~el~~~~~~~g-----~~~~~~-~~~~~~~~~d~~~dg~i~~~  582 (586)
                      .+|+.||+|++|+|+.+||+.++..++     ..++.+ .++.+++.+|.|+||.|++.
T Consensus        97 ~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~  155 (211)
T 2ggz_A           97 WYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLE  155 (211)
T ss_dssp             HHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHH
T ss_pred             HHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHH
Confidence            999999999999999999999998876     566654 48999999999999999874

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=99.70  E-value=5.2e-17  Score=157.38  Aligned_cols=164  Identities=18%  Similarity=0.169  Sum_probs=132.9

Q ss_pred             CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCC-CCCcccHhHHHhhhhhhc-cCCchhHHHHHHhhhcCCCCCccc
Q 043828          400 KNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVD-GNGLLSCDEFVTMSVHLK-RIGNDDILSQAFRFFDKNQSGFIE  477 (586)
Q Consensus       400 ~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d-~dg~i~~~eF~~~~~~~~-~~~~~~~~~~~F~~~D~d~~G~i~  477 (586)
                      ..+.++.++|..++...  .++.+++..+|+.+|.+ ++|.|+++||..++.... .......+..+|+.+|.|++|.|+
T Consensus        70 ~~~~l~~e~l~~l~~~~--~~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~  147 (256)
T 2jul_A           70 STVRHQPEGLDQLQAQT--KFTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIH  147 (256)
T ss_dssp             ------CTHHHHHHHHT--TSCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEEC
T ss_pred             ccccCCHHHHHHHHHHh--CCCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCc
Confidence            34557778888888764  47899999999999875 899999999999877653 345567899999999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc------------------chHHHHHHHhhhhhc
Q 043828          478 VDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS------------------GADWKMASRQYSRAM  539 (586)
Q Consensus       478 ~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~------------------~~~~~~~F~~~D~d~  539 (586)
                      .+||..++..++.... .+++..+|..+|.|++|.|+++||..++..                  .+.+..+|+.+|.|+
T Consensus       148 ~~Ef~~~l~~~~~~~~-~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~  226 (256)
T 2jul_A          148 FEDFVVGLSILLRGTV-HEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQ  226 (256)
T ss_dssp             SHHHHHHHHHHHSCCH-HHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCST
T ss_pred             HHHHHHHHHHHhccCh-HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCC
Confidence            9999999988776555 788999999999999999999999998752                  156889999999999


Q ss_pred             cCcccHHHHHHHHHhhcccCChhhHHHHHHhhc
Q 043828          540 MSALSIKLFKDKSMELTKSMELNKSMELKKSVE  572 (586)
Q Consensus       540 ~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d  572 (586)
                      +|.|+.+||..++...      ..+.+.+..+|
T Consensus       227 dG~Is~~Ef~~~~~~~------~~l~~~l~~~d  253 (256)
T 2jul_A          227 DGVVTIDEFLETCQKD------ENIMNSMQLFE  253 (256)
T ss_dssp             TCSBCHHHHHHHHHHC------SSHHHHHHHHH
T ss_pred             CCcEeHHHHHHHHHhC------HHHHHHHHhhc
Confidence            9999999999998753      23444555444

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=99.70  E-value=3.6e-18  Score=162.28  Aligned_cols=124  Identities=14%  Similarity=0.182  Sum_probs=101.1

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHH-HHHhcCCCCCCHHHHHHHHHHh---------cCCCCCceeHHHHHHHHhcc--
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKE-VLLEDNAGPNGDQTIRDILRDV---------DLDRDGRISFEEFKAMMTSG--  525 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~-~l~~~~~~~~~~~~~~~~~~~~---------d~~~dg~i~~~eF~~~~~~~--  525 (586)
                      ...++++|..+|.|++|.|+.+||.. +++.+|..++ ..++..++..+         |.|++|.|+|+||+.++...  
T Consensus        50 ~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~-~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~  128 (226)
T 2lvv_A           50 KSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEF-TTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEFRLMLCY  128 (226)
T ss_dssp             HHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTT-SSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCC-HHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHHHHHHHHh
Confidence            35688899999999999999999998 5666676655 44566666666         99999999999999853322  


Q ss_pred             ----hHHHHHHHhhhhhccCcccHHHHHHHHHhhcc-cCChhhHHHHHHhhccCCCceEecC
Q 043828          526 ----ADWKMASRQYSRAMMSALSIKLFKDKSMELTK-SMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       526 ----~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~-~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                          ..++.+|+.||+|++|+|+.+||+.++..++. .++.+++..+|..+|.|+||.|++.
T Consensus       129 ~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~~~~~~~D~d~dG~Is~~  190 (226)
T 2lvv_A          129 IYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFD  190 (226)
T ss_dssp             HHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCHHHHHHHCCSCSSCEEHH
T ss_pred             ccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHHHHHHHhCCCCCCcEeHH
Confidence                47889999999999999999999999988732 3555679999999999999999874

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.70  E-value=1.9e-17  Score=166.79  Aligned_cols=140  Identities=15%  Similarity=0.192  Sum_probs=99.9

Q ss_pred             eeecceeccCCceEEEEEEEccCCcEEEEEEeeccccC-----------ChhcH--------HHHHHHHHHHHhCCCCCC
Q 043828           83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK-----------TEIDI--------DDVRREVEIMRHLPKHPN  143 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~-----------~~~~~--------~~~~~Ei~~l~~l~~hpn  143 (586)
                      |.+++.||.|++|.||+|.+ .+|+.||||+++.....           .....        -...+|...|.+| .+++
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d-~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL-~~~g  174 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVAD-EKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKAL-YEEG  174 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEEC-TTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHH-HHTT
T ss_pred             EEecCEeeeCCceEEEEEEC-CCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH-HhcC
Confidence            99999999999999999987 46999999997643211           00000        1124577778877 4444


Q ss_pred             e--eEEEEEEEeCCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCC-
Q 043828          144 I--VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSE-  220 (586)
Q Consensus       144 I--v~l~~~~~~~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~-  220 (586)
                      +  ...++.  ..  .+|||||++|++|..+.      ....+..++.||+.+|.+||+.|||||||||.|||+..+.. 
T Consensus       175 v~vp~p~~~--~~--~~LVME~i~G~~L~~l~------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~  244 (397)
T 4gyi_A          175 FPVPEPIAQ--SR--HTIVMSLVDALPMRQVS------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDA  244 (397)
T ss_dssp             CSCCCEEEE--ET--TEEEEECCSCEEGGGCC------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECS
T ss_pred             CCCCeeeec--cC--ceEEEEecCCccHhhhc------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCc
Confidence            3  233332  22  37999999998886532      12245678899999999999999999999999999964211 


Q ss_pred             ------CCceEEeecccccc
Q 043828          221 ------NSQLKAIDFGLSIF  234 (586)
Q Consensus       221 ------~~~vkl~Dfg~a~~  234 (586)
                            ...+.|+||+.+..
T Consensus       245 ~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          245 EDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             SCTTSEEEEEEECCCTTCEE
T ss_pred             ccccccccceEEEEeCCccc
Confidence                  11489999997765

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=99.69  E-value=1e-16  Score=146.09  Aligned_cols=121  Identities=7%  Similarity=0.073  Sum_probs=105.1

Q ss_pred             CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhc---CCCCCceeHHHHHHHHhcc------h
Q 043828          456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVD---LDRDGRISFEEFKAMMTSG------A  526 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d---~~~dg~i~~~eF~~~~~~~------~  526 (586)
                      ....+++++|..||  ++|+|+.+||..++   |..++ +..+..++..+|   .+++|.|+|+||..++...      +
T Consensus        25 ~~~~~~~~~F~~~D--~dG~I~~~el~~~l---g~~~~-~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~~~~~~   98 (179)
T 3a8r_A           25 DGWAAVEKRFNQLQ--VDGVLLRSRFGKCI---GMDGS-DEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDN   98 (179)
T ss_dssp             CCHHHHHHHHHHHC--BTTBEEGGGHHHHH---TCCSC-HHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHCCCHHH
T ss_pred             hhHHHHHHHHhccC--CCCCCcHHHHHHHH---CCCCc-HHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcCCCHHH
Confidence            34567899999999  79999999999965   66665 777888888887   5678999999999886532      5


Q ss_pred             HHHHHHHhhhhhccCcccHHHHHHHHH-hhccc-C------ChhhHHHHHHhhccCCCceEecC
Q 043828          527 DWKMASRQYSRAMMSALSIKLFKDKSM-ELTKS-M------ELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       527 ~~~~~F~~~D~d~~G~i~~~el~~~~~-~~g~~-~------~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      .++.+|+.||+|++|+|+.+||+.++. .+|.. +      ++++++.+++.+|.|+||.|++.
T Consensus        99 ~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~  162 (179)
T 3a8r_A           99 RLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEME  162 (179)
T ss_dssp             HHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHH
T ss_pred             HHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHH
Confidence            789999999999999999999999998 88876 6      88999999999999999999874

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=99.69  E-value=1.2e-16  Score=151.81  Aligned_cols=123  Identities=14%  Similarity=0.217  Sum_probs=103.3

Q ss_pred             hhHHHHHHhhhcCC--CCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHH
Q 043828          458 DDILSQAFRFFDKN--QSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADW  528 (586)
Q Consensus       458 ~~~~~~~F~~~D~d--~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~  528 (586)
                      ..+++++|..+|.|  ++|.|+.+||..+|.. ..... +..+..+|..+|.|++|.|+|+||+.++...       +.+
T Consensus        47 i~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~-~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~l  124 (226)
T 2zfd_A           47 IEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKE-SLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKI  124 (226)
T ss_dssp             HHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCC-CHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHH
T ss_pred             HHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCccc-HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHHH
Confidence            34578889999998  9999999999999876 22222 4567789999999999999999999887643       468


Q ss_pred             HHHHHhhhhhccCcccHHHHHHHHH----hhcccCChhhHHHHHH----hhccCCCceEecC
Q 043828          529 KMASRQYSRAMMSALSIKLFKDKSM----ELTKSMELNKSMELKK----SVELKKSGQLRIP  582 (586)
Q Consensus       529 ~~~F~~~D~d~~G~i~~~el~~~~~----~~g~~~~~~~~~~~~~----~~d~~~dg~i~~~  582 (586)
                      +.+|+.||+|++|+|+.+||+.++.    .+|..+++++++.++.    .+|.|+||.|++.
T Consensus       125 ~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~  186 (226)
T 2zfd_A          125 HFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKE  186 (226)
T ss_dssp             HHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHH
T ss_pred             HHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHH
Confidence            9999999999999999999999985    5788999999877765    8999999999874

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=99.68  E-value=6.3e-17  Score=148.32  Aligned_cols=119  Identities=15%  Similarity=0.171  Sum_probs=106.1

Q ss_pred             hHHHHHHhhhcC-----CC-C--CcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCc-eeHHHHHHHHhcc----
Q 043828          459 DILSQAFRFFDK-----NQ-S--GFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGR-ISFEEFKAMMTSG----  525 (586)
Q Consensus       459 ~~~~~~F~~~D~-----d~-~--G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~-i~~~eF~~~~~~~----  525 (586)
                      ..++++|..+|.     |+ +  |.|+.+||.. |..+|..+. .   ..++..+|.|++|. |+|+||+.++...    
T Consensus        20 ~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~-~---~~l~~~~D~d~~G~~I~~~EF~~~~~~~~~~~   94 (183)
T 1dgu_A           20 LLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPF-K---ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTA   94 (183)
T ss_dssp             HHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTT-H---HHHHHHHSCSSSSCCCCHHHHHHHHHHHSTTC
T ss_pred             HHHHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcH-H---HHHHHHhCCCCCCCEecHHHHHHHHHHhcCCC
Confidence            458889999999     68 8  9999999999 988888776 3   46788899999999 9999999988642    


Q ss_pred             ---hHHHHHHHhhhhhccCcccHHHHHHHHHhhcc-----cCChhhHHH----HHHhhccCCCceEecC
Q 043828          526 ---ADWKMASRQYSRAMMSALSIKLFKDKSMELTK-----SMELNKSME----LKKSVELKKSGQLRIP  582 (586)
Q Consensus       526 ---~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~-----~~~~~~~~~----~~~~~d~~~dg~i~~~  582 (586)
                         ..++.+|+.||+|++|+|+.+||+.++..+|.     .++++++..    +++.+|.|+||.|++.
T Consensus        95 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~  163 (183)
T 1dgu_A           95 TPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS  163 (183)
T ss_dssp             CHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEHH
T ss_pred             CHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcHH
Confidence               57999999999999999999999999999987     788998886    9999999999999974

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.68  E-value=5e-17  Score=172.87  Aligned_cols=125  Identities=18%  Similarity=0.292  Sum_probs=106.7

Q ss_pred             CchhHHHHHHhhhcCCCCCcccHHHH----HHHHHhcCCCCCC------HHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          456 GNDDILSQAFRFFDKNQSGFIEVDEL----KEVLLEDNAGPNG------DQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~d~~G~i~~~el----~~~l~~~~~~~~~------~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      ...++++++|+.+|+|+||.|+.+||    ..+++.+|..++.      +.++..+|..+|.|+||.|+|+||+.++...
T Consensus       332 ~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~  411 (484)
T 3nyv_A          332 DETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDR  411 (484)
T ss_dssp             HHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhc
Confidence            34567999999999999999999999    4555555655431      6789999999999999999999999987643


Q ss_pred             ------hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          526 ------ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       526 ------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                            +.++.+|+.||+|++|+|+.+||+.++..  ..+++++++++|+.+|.|+||.|++.
T Consensus       412 ~~~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~--~~~~~~~~~~~~~~~D~d~dG~i~~~  472 (484)
T 3nyv_A          412 KTLLSRERLERAFRMFDSDNSGKISSTELATIFGV--SDVDSETWKSVLSEVDKNNDGEVDFD  472 (484)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH--TTCCHHHHHHHHHHHCTTCCSEEEHH
T ss_pred             cccCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHHHHhcCCCCCcCCHH
Confidence                  67899999999999999999999999877  56899999999999999999999975

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=99.68  E-value=1.5e-16  Score=132.46  Aligned_cols=103  Identities=23%  Similarity=0.374  Sum_probs=92.4

Q ss_pred             cCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhc---CCCC
Q 043828          416 IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLED---NAGP  492 (586)
Q Consensus       416 ~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~---~~~~  492 (586)
                      ++..+++++++.+|+.+|  ++|.|+|+||+.++..  .....+.++.+|+.||+|++|+|+.+||..++..+   |...
T Consensus         3 l~~~~~~~ei~~~~~~~D--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~   78 (109)
T 3fs7_A            3 ITDILSAKDIESALSSCQ--AADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVL   78 (109)
T ss_dssp             GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCC
T ss_pred             ccCcCCHHHHHHHHHhcC--CCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccC
Confidence            567899999999999998  8999999999987653  34567889999999999999999999999999998   5555


Q ss_pred             CCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          493 NGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       493 ~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      + +++++.++..+|.|+||.|+|+||+.++.
T Consensus        79 ~-~~~~~~~~~~~D~~~dg~i~~~EF~~~~~  108 (109)
T 3fs7_A           79 T-SAETKAFLAAGDTDGDGKIGVEEFQSLVK  108 (109)
T ss_dssp             C-HHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred             C-HHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            5 89999999999999999999999999875

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=99.68  E-value=2.5e-16  Score=131.06  Aligned_cols=104  Identities=27%  Similarity=0.384  Sum_probs=92.8

Q ss_pred             hcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhc---CCC
Q 043828          415 MIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLED---NAG  491 (586)
Q Consensus       415 ~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~---~~~  491 (586)
                      .+|.+++.++++.+++.+|  ++|.|+|+||+.++..  .....+.++.+|+.||+|++|+|+.+||..++..+   |..
T Consensus         2 slg~~~~~~e~~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~   77 (109)
T 1bu3_A            2 AFSGILADADVAAALKACE--AADSFNYKAFFAKVGL--TAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARA   77 (109)
T ss_dssp             CCSCSSCHHHHHHHHHHTC--STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCC
T ss_pred             cccccCCHHHHHHHHHHhC--CCCcCcHHHHHHHHHc--ChhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCC
Confidence            4688999999999999998  8999999999986643  23457789999999999999999999999999998   555


Q ss_pred             CCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          492 PNGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       492 ~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      .+ ++++..++..+|.|+||.|+|+||+.++.
T Consensus        78 ~~-~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  108 (109)
T 1bu3_A           78 LT-DAETKAFLKAGDSDGDGAIGVDEWAALVK  108 (109)
T ss_dssp             CC-HHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred             CC-HHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            55 89999999999999999999999999875

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=99.67  E-value=1.6e-16  Score=151.11  Aligned_cols=123  Identities=16%  Similarity=0.207  Sum_probs=98.3

Q ss_pred             HHHHHHhhh-cCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc------hHHHHHH
Q 043828          460 ILSQAFRFF-DKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG------ADWKMAS  532 (586)
Q Consensus       460 ~~~~~F~~~-D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~~~~F  532 (586)
                      +++.+++.| +.|++|.|+.+||..++..++........+..+|..+|.|++|.|+|+||+..+...      +.++.+|
T Consensus        65 ei~~l~~~F~~~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F  144 (229)
T 3dd4_A           65 ELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAF  144 (229)
T ss_dssp             HHHHHHHHHHTTCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred             HHHHHHHHHHhhCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChHHHHHHHH
Confidence            344444444 367788999999999888754443446778889999999999999999998887643      6688999


Q ss_pred             HhhhhhccCcccHHHHHHHHHhh------------cccCChhhHHHHHHhhccCCCceEecC
Q 043828          533 RQYSRAMMSALSIKLFKDKSMEL------------TKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       533 ~~~D~d~~G~i~~~el~~~~~~~------------g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +.||+|++|+|+.+||..++..+            +..+++++++.+++.+|.|+||.|++.
T Consensus       145 ~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~  206 (229)
T 3dd4_A          145 NLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTID  206 (229)
T ss_dssp             HHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHH
T ss_pred             HHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHH
Confidence            99999999999999999999876            567889999999999999999999874

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=99.67  E-value=2.8e-16  Score=130.54  Aligned_cols=103  Identities=31%  Similarity=0.399  Sum_probs=91.7

Q ss_pred             hcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhc---CCC
Q 043828          415 MIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLED---NAG  491 (586)
Q Consensus       415 ~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~---~~~  491 (586)
                      .+|. +++++++.+|+.+|  ++|.|+|+||+.++..  .....+.++.+|+.||+|++|+|+.+||..++..+   |..
T Consensus         2 slG~-~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~   76 (108)
T 2pvb_A            2 SFAG-LKDADVAAALAACS--AADSFKHKEFFAKVGL--ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARA   76 (108)
T ss_dssp             CCTT-SCHHHHHHHHHHTC--STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCC
T ss_pred             CcCC-CCHHHHHHHHHHhC--CCCcCcHHHHHHHHhC--ChhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCC
Confidence            4788 99999999999998  8999999999987643  23457789999999999999999999999999998   555


Q ss_pred             CCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          492 PNGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       492 ~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      .+ ++++..++..+|.|+||.|+|+||+.++.
T Consensus        77 ~~-~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 2pvb_A           77 LT-DAETKAFLADGDKDGDGMIGVDEFAAMIK  107 (108)
T ss_dssp             CC-HHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             CC-HHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            55 89999999999999999999999999875

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=99.66  E-value=2.9e-17  Score=150.88  Aligned_cols=122  Identities=13%  Similarity=0.134  Sum_probs=89.7

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhc------CCCCCCHHHHHHHH---------HHhcCCCCCceeHHHHHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLED------NAGPNGDQTIRDIL---------RDVDLDRDGRISFEEFKAMM  522 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~------~~~~~~~~~~~~~~---------~~~d~~~dg~i~~~eF~~~~  522 (586)
                      ...++++|+.+|+|++|+|+.+||..+++.+      |..++ ..++..++         ..+|.|++|.|+|+|  .++
T Consensus        13 ~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~-~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~~E--~~~   89 (186)
T 2hps_A           13 LRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKA-EETRQEFLRVADQLGLAPGVRISVEEAAVNAT--DSL   89 (186)
T ss_dssp             HHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHH-HHHHHHHHHHHHHHTCCTTCEEEHHHHHHHHH--HHH
T ss_pred             HHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCC-cHHHHHHHHHHHHHHHHHhcCCCCCCcccHHH--HHH
Confidence            3457778888888888888888888877655      55444 56666664         777888888888888  343


Q ss_pred             hcc-------hHHHHHH--HhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          523 TSG-------ADWKMAS--RQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       523 ~~~-------~~~~~~F--~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      ...       ..+..+|  ..||+|++|+|+.+||+.++..+|..+++++++.+++.+|.|+||+|++.
T Consensus        90 ~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~  158 (186)
T 2hps_A           90 LKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRD  158 (186)
T ss_dssp             HHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEHH
T ss_pred             HHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcHH
Confidence            322       3455556  77788888888888888888888877888888888888888888888764

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=99.66  E-value=4.7e-17  Score=175.25  Aligned_cols=135  Identities=18%  Similarity=0.241  Sum_probs=66.0

Q ss_pred             hHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHh
Q 043828          387 AQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFR  466 (586)
Q Consensus       387 ~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~  466 (586)
                      ..++++|..||.|++|.|+.+||+.+|+.+|.+++.++++.+|+.+|.|++|.|+|+||+.++....   ..++++++|+
T Consensus        11 ~~l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~---~~~el~~aF~   87 (624)
T 1djx_A           11 HWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLT---QRAEIDRAFE   87 (624)
T ss_dssp             ---------------------------------------------------------CTTHHHHHHT---CCHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhc---cHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999999999999999998776543   2478999999


Q ss_pred             hhcCCCCCcccHHHHHHHHHhc-CCCCCCHHHHHHHHHHhcCC----CCCceeHHHHHHHHhcc
Q 043828          467 FFDKNQSGFIEVDELKEVLLED-NAGPNGDQTIRDILRDVDLD----RDGRISFEEFKAMMTSG  525 (586)
Q Consensus       467 ~~D~d~~G~i~~~el~~~l~~~-~~~~~~~~~~~~~~~~~d~~----~dg~i~~~eF~~~~~~~  525 (586)
                      .||.+ +|+|+.+||+.+|... |....++++++++|+.+|.|    ++|.|+|+||+.+|...
T Consensus        88 ~fD~~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~  150 (624)
T 1djx_A           88 EAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSA  150 (624)
T ss_dssp             HHHTT-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHST
T ss_pred             HhcCC-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcCc
Confidence            99986 9999999999999976 44424589999999999998    79999999999998754

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=99.66  E-value=4.9e-16  Score=129.27  Aligned_cols=104  Identities=29%  Similarity=0.431  Sum_probs=92.4

Q ss_pred             cCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhc---CCCC
Q 043828          416 IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLED---NAGP  492 (586)
Q Consensus       416 ~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~---~~~~  492 (586)
                      +|..++.++++.+++.+|.  +|.|+|+||+.++..  .....+.++.+|+.||+|++|+|+.+||..+|..+   |...
T Consensus         2 l~~~~s~~ei~~~~~~~d~--~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~   77 (109)
T 5pal_A            2 MTKVLKADDINKAISAFKD--PGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDL   77 (109)
T ss_dssp             GGGTSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred             CCCcCCHHHHHHHHHHhCC--CCcCcHHHHHHHHhh--ccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCC
Confidence            4567899999999999987  899999999997643  24567789999999999999999999999999998   7666


Q ss_pred             CCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          493 NGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       493 ~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      + ++++..++..+|.|+||.|+|+||+.++..
T Consensus        78 ~-~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 5pal_A           78 N-DTETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             C-HHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             C-HHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence            6 889999999999999999999999998863

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=99.65  E-value=1.2e-16  Score=150.23  Aligned_cols=118  Identities=15%  Similarity=0.176  Sum_probs=101.2

Q ss_pred             HHHHHHhhhcC-----CC-C--CcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCc-eeHHHHHHHHhcc-----
Q 043828          460 ILSQAFRFFDK-----NQ-S--GFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGR-ISFEEFKAMMTSG-----  525 (586)
Q Consensus       460 ~~~~~F~~~D~-----d~-~--G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~-i~~~eF~~~~~~~-----  525 (586)
                      .+.++|..+|.     |+ +  |.|+.+||.. +..+|..+.    ...++..+|.|++|. |+|+||+.++...     
T Consensus        52 ~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~lg~~~~----~~~lf~~~D~d~dG~~I~f~EF~~~~~~~~~~~~  126 (214)
T 2l4h_A           52 LAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPF----KERICRVFSTSPAKDSLSFEDFLDLLSVFSDTAT  126 (214)
T ss_dssp             HHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHHHTSTT----HHHHHHHHCCSSSCCSEEHHHHHHHHHHTSSCSC
T ss_pred             HHHHHHHHhCcccccccccccCCcCCHHHHHH-hhccCCChH----HHHHHHHhCcCCCCCEecHHHHHHHHHHHcCCCC
Confidence            35556777777     55 6  9999999998 888887766    356788899999999 9999999988642     


Q ss_pred             --hHHHHHHHhhhhhccCcccHHHHHHHHHhhcc-----cCChhhHHH----HHHhhccCCCceEecC
Q 043828          526 --ADWKMASRQYSRAMMSALSIKLFKDKSMELTK-----SMELNKSME----LKKSVELKKSGQLRIP  582 (586)
Q Consensus       526 --~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~-----~~~~~~~~~----~~~~~d~~~dg~i~~~  582 (586)
                        +.++.+|+.||+|++|+|+.+||+.++..+|.     .+++++++.    +++.+|.|+||.|++.
T Consensus       127 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is~~  194 (214)
T 2l4h_A          127 PDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS  194 (214)
T ss_dssp             HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBCSH
T ss_pred             HHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCCHH
Confidence              47899999999999999999999999999886     789988886    9999999999999975

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=99.65  E-value=3.2e-16  Score=130.37  Aligned_cols=104  Identities=26%  Similarity=0.407  Sum_probs=91.5

Q ss_pred             cCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhc---CCCC
Q 043828          416 IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLED---NAGP  492 (586)
Q Consensus       416 ~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~---~~~~  492 (586)
                      +|..+++++++.+|+.+|  ++|.|+|+||+.++..  .....+.++.+|+.||+|++|+|+.+||..++..+   |...
T Consensus         2 lg~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~   77 (109)
T 1rwy_A            2 MTDLLSAEDIKKAIGAFT--AADSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDL   77 (109)
T ss_dssp             HHHHSCHHHHHHHHHTTC--STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred             CCCcCCHHHHHHHHHHcC--CCCcEeHHHHHHHHhc--CcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCC
Confidence            356688999999999998  8999999999987632  23567789999999999999999999999999998   5555


Q ss_pred             CCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          493 NGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       493 ~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      + ++++..++..+|.|++|.|+|+||+.++..
T Consensus        78 ~-~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 1rwy_A           78 S-AKETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             C-HHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             C-HHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence            5 889999999999999999999999998763

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=99.65  E-value=3.5e-16  Score=130.42  Aligned_cols=105  Identities=25%  Similarity=0.421  Sum_probs=92.4

Q ss_pred             hcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhc---CCC
Q 043828          415 MIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLED---NAG  491 (586)
Q Consensus       415 ~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~---~~~  491 (586)
                      .+|..++.++++.+++.+|  ++|.|+|+||+.++..  .....+.++.+|+.||+|++|+|+.+||..++..+   |..
T Consensus         2 alG~~~t~~e~~~~~~~~d--~~g~i~~~ef~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~   77 (110)
T 1pva_A            2 AAKDLLKADDIKKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRD   77 (110)
T ss_dssp             CHHHHSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCC
T ss_pred             cccccCCHHHHHHHHHhcC--CCCcCcHHHHHHHHcc--CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCC
Confidence            3567789999999999998  8999999999987632  23457789999999999999999999999999998   555


Q ss_pred             CCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          492 PNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       492 ~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      .+ ++++..++..+|.|++|.|+|+||+.++..
T Consensus        78 ~~-~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  109 (110)
T 1pva_A           78 LT-DAETKAFLKAADKDGDGKIGIDEFETLVHE  109 (110)
T ss_dssp             CC-HHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             CC-HHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence            55 889999999999999999999999998864

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=99.64  E-value=7.4e-16  Score=127.93  Aligned_cols=103  Identities=24%  Similarity=0.394  Sum_probs=90.5

Q ss_pred             cCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhc---CCCC
Q 043828          416 IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLED---NAGP  492 (586)
Q Consensus       416 ~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~---~~~~  492 (586)
                      ++..+++++++.+|+.+|  ++|.|+|+||+.++..  .....+.++.+|+.||+|++|+|+.+||..++..+   |...
T Consensus         2 l~~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~   77 (108)
T 1rro_A            2 ITDILSAEDIAAALQECQ--DPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAREL   77 (108)
T ss_dssp             GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHSG--GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCC
T ss_pred             ccccCCHHHHHHHHHHcc--CCCCcCHHHHHHHHhc--CcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCC
Confidence            456789999999999998  8999999999986632  23457789999999999999999999999999998   4445


Q ss_pred             CCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          493 NGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       493 ~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      + ++++..++..+|.|+||.|+|+||+.++.
T Consensus        78 ~-~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 1rro_A           78 T-ESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             C-HHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             C-HHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence            4 88999999999999999999999999875

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=99.63  E-value=5.1e-16  Score=171.11  Aligned_cols=120  Identities=13%  Similarity=0.133  Sum_probs=79.8

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhc--------CCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHH
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLED--------NAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKM  530 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~--------~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~  530 (586)
                      ++++++|+.+| |++|.|+.+||..+|+.+        +.... .++++.++..+|.|++|.|+|+||+.++...+.++.
T Consensus       532 ~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s-~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~~~~l~~  609 (714)
T 3bow_A          532 DGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFS-IETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQK  609 (714)
T ss_dssp             HHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCC-HHHHHHHHHHHCCSSCSSBCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCC-HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHH
Confidence            45666666666 666666666666666664        33343 666666666666666666777776666665566666


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEec
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRI  581 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~  581 (586)
                      +|+.||+|++|+|+.+||+.+|..+|..+++++++.|++.+| |+||.|++
T Consensus       610 ~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~dG~Isf  659 (714)
T 3bow_A          610 IYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DDELIIDF  659 (714)
T ss_dssp             HHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CTTCEECH
T ss_pred             HHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCeEcH
Confidence            666667666677777776666666666666666666666666 66666665

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=99.61  E-value=7.9e-16  Score=175.03  Aligned_cols=141  Identities=18%  Similarity=0.344  Sum_probs=125.8

Q ss_pred             hhcccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhc-
Q 043828          375 RVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLK-  453 (586)
Q Consensus       375 ~~~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-  453 (586)
                      ......+..++...++.+|..||.|++|+|+.+||..+|..+|..++..++..+|..+|.|+||.|+|+||+.++.... 
T Consensus       713 ~~~~~~l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~  792 (863)
T 1sjj_A          713 TRDAKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETA  792 (863)
T ss_dssp             HCCCCCSSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHST
T ss_pred             HhhccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhc
Confidence            3445667788899999999999999999999999999999999999999999999999999999999999998765442 


Q ss_pred             cCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCC-----CCCceeHHHHHHHHhc
Q 043828          454 RIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLD-----RDGRISFEEFKAMMTS  524 (586)
Q Consensus       454 ~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~-----~dg~i~~~eF~~~~~~  524 (586)
                      .....+.++.+|+.| .|++|+|+.+||..+|.        +++++.++..+|.+     +||.|+|+||+.++..
T Consensus       793 ~~~~~~~l~~aF~~~-~d~~G~Is~~El~~~l~--------~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~~  859 (863)
T 1sjj_A          793 DTDTADQVMASFKIL-AGDKNYITVDELRRELP--------PDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYG  859 (863)
T ss_dssp             TCSSSHHHHHHHHGG-GTSSSEEEHHHHHHHSC--------HHHHHHHHHHSEECCSSCCCTTEEESHHHHHHHSC
T ss_pred             CCCCHHHHHHHHHHH-hCCCCcCcHHHHHHHCC--------HHHHHHHHHHcchhcCCCCCCCceeHHHHHHHHhc
Confidence            344567899999999 89999999999999883        67899999999987     7999999999999875

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=99.60  E-value=3.9e-16  Score=137.84  Aligned_cols=114  Identities=12%  Similarity=0.140  Sum_probs=90.1

Q ss_pred             CCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHH
Q 043828          419 KVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTI  498 (586)
Q Consensus       419 ~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~  498 (586)
                      .++..+++.++..+|.+++    |.+|..+      ....+.++.+|+.||+|++|+|+.+||..+|..+|...+ +.++
T Consensus        20 ~~~~~~~~~i~~~~d~~~~----~~~~~~l------~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~-~~e~   88 (150)
T 2jjz_A           20 ARQERRLAEINREFLCDQK----YSDEENL------PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKT-HLEM   88 (150)
T ss_dssp             HHHHHHHHHHHHHHHTCGG----GSSCTTH------HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCC-HHHH
T ss_pred             CCcHHHHHHHHHHhccCCC----chhhHhH------HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCC-HHHH
Confidence            3567889999999998775    4444333      233567999999999999999999999999999998776 8899


Q ss_pred             HHHHHHhcCCCCCceeHHHHHHHHhcc-hHHHHHHHhhhhhccCcc
Q 043828          499 RDILRDVDLDRDGRISFEEFKAMMTSG-ADWKMASRQYSRAMMSAL  543 (586)
Q Consensus       499 ~~~~~~~d~~~dg~i~~~eF~~~~~~~-~~~~~~F~~~D~d~~G~i  543 (586)
                      ..++..+|.|++|.|+|+||+.++... ..++.+|+.||.|++|+-
T Consensus        89 ~~l~~~~D~d~dg~I~~~eF~~~~~~~~~~i~~aF~~~D~d~~G~~  134 (150)
T 2jjz_A           89 KKMISEVTGGVSDTISYRDFVNMMLGKRSAVLKLVMMFEGKANESS  134 (150)
T ss_dssp             HHHHHHHHTTSCSSBCHHHHHHHHHSSSCCHHHHHHC---------
T ss_pred             HHHHHHHCCCCCCcEeHHHHHHHHHHhHHHHHHHHHHHcCCCCCCC
Confidence            999999999999999999999999864 779999999999999984

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=99.60  E-value=8e-16  Score=133.26  Aligned_cols=101  Identities=15%  Similarity=0.186  Sum_probs=67.7

Q ss_pred             HHHHHHHHhcCCCCCcccHhHHHhhhhhh-ccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCC-CCCCHHHHHHH
Q 043828          424 DVKMLMEAADVDGNGLLSCDEFVTMSVHL-KRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNA-GPNGDQTIRDI  501 (586)
Q Consensus       424 ~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~-~~~~~~~~~~~  501 (586)
                      .++++|+.+|.|++|.|+|+||+.++... ......+.++.+|+.||+|++|+|+.+||..+|..+|. ..+ .++++.+
T Consensus         4 ~~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~-~~e~~~~   82 (135)
T 3h4s_E            4 TEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMS-KEDAQGM   82 (135)
T ss_dssp             ---------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCC-HHHHHHH
T ss_pred             hHHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCC-HHHHHHH
Confidence            45789999999999999999999866442 22234578999999999999999999999999999995 655 8999999


Q ss_pred             HHHhcCCCCCceeHHHHHHHHhcc
Q 043828          502 LRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       502 ~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      +..+|.|+||.|+|+||+.++...
T Consensus        83 ~~~~D~d~dG~I~~~EF~~~~~~~  106 (135)
T 3h4s_E           83 VREGDLDGDGALNQTEFCVLMVRL  106 (135)
T ss_dssp             HHHHCSSCSSSBCHHHHHHHHHHH
T ss_pred             HHHhCCCCCCCCcHHHHHHHHHHh
Confidence            999999999999999999998753

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=99.59  E-value=2.6e-16  Score=169.51  Aligned_cols=124  Identities=19%  Similarity=0.197  Sum_probs=58.2

Q ss_pred             chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc---chHHHHHHH
Q 043828          457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS---GADWKMASR  533 (586)
Q Consensus       457 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~---~~~~~~~F~  533 (586)
                      .+.+++++|+.||+|++|+|+.+||..+|+.+|...+ +++++.+|..+|.|++|.|+|+||+.++..   .++++.+|+
T Consensus         9 ~e~~l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s-~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~~~el~~aF~   87 (624)
T 1djx_A            9 LQHWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVD-DGYARKIFRECDHSQTDSLEDEEIETFYKMLTQRAEIDRAFE   87 (624)
T ss_dssp             ------------------------------------------------------------CTTHHHHHHTCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCC-HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhccHHHHHHHHH
Confidence            3457899999999999999999999999999998766 788999999999999999999999998864   378999999


Q ss_pred             hhhhhccCcccHHHHHHHHHhh-ccc-CChhhHHHHHHhhccC----CCceEecC
Q 043828          534 QYSRAMMSALSIKLFKDKSMEL-TKS-MELNKSMELKKSVELK----KSGQLRIP  582 (586)
Q Consensus       534 ~~D~d~~G~i~~~el~~~~~~~-g~~-~~~~~~~~~~~~~d~~----~dg~i~~~  582 (586)
                      .||++ +|+|+.+||+.+|... |+. ++++++++||+++|.|    +||.|++.
T Consensus        88 ~fD~~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~d  141 (624)
T 1djx_A           88 EAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKD  141 (624)
T ss_dssp             HHHTT-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHH
T ss_pred             HhcCC-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHH
Confidence            99986 9999999999999864 776 9999999999999998    79999874

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=99.58  E-value=3.9e-16  Score=129.66  Aligned_cols=103  Identities=29%  Similarity=0.407  Sum_probs=90.5

Q ss_pred             cCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhc---CCCC
Q 043828          416 IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLED---NAGP  492 (586)
Q Consensus       416 ~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~---~~~~  492 (586)
                      ++..+++++++.+|+.+|  ++|.|+|+||+.++..  .....+.++.+|+.||.|++|+|+.+||..++..+   |...
T Consensus         2 l~~~~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~   77 (108)
T 2kyc_A            2 LTDILSPSDIAAALRDCQ--APDSFSPKKFFQISGM--SKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVL   77 (108)
T ss_dssp             TTSSSCHHHHHHHHTTSC--STTTCCHHHHHHHHTC--TTCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCC
T ss_pred             ccccCCHHHHHHHHHHcC--CCCcCCHHHHHHHHhh--CcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCC
Confidence            577899999999999998  8999999999987632  23456679999999999999999999999999988   5555


Q ss_pred             CCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          493 NGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       493 ~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      + ++++..++..+|.|++|.|+|+||+.++.
T Consensus        78 ~-~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  107 (108)
T 2kyc_A           78 T-ASETKTFLAAADHDGDGKIGAEEFQEMVQ  107 (108)
T ss_dssp             C-TTTTHHHHTTTCCSSSSCCCSSHHHHHHH
T ss_pred             C-HHHHHHHHHHhCCCCCCcCCHHHHHHHHh
Confidence            5 77899999999999999999999999875

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=99.57  E-value=2.2e-15  Score=171.40  Aligned_cols=116  Identities=13%  Similarity=0.250  Sum_probs=106.3

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKM  530 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~  530 (586)
                      ...++.+|+.||.|++|+|+.+||..+|..+|..++ +.++..+|..+|.|+||.|+|+||+.++...       +.++.
T Consensus       724 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~-~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~l~~  802 (863)
T 1sjj_A          724 MNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMG-EAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMA  802 (863)
T ss_dssp             HHHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCC-THHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCSSSHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCC-HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHH
Confidence            456899999999999999999999999999998877 7889999999999999999999999988643       67999


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccC-----CCceEecC
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELK-----KSGQLRIP  582 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~-----~dg~i~~~  582 (586)
                      +|+.| .|++|+|+.+||+.++       ++++++.+++.+|.|     +||.|++.
T Consensus       803 aF~~~-~d~~G~Is~~El~~~l-------~~~~~~~l~~~~d~~~~~~~~dg~I~~~  851 (863)
T 1sjj_A          803 SFKIL-AGDKNYITVDELRREL-------PPDQAEYCIARMAPYNGRDAVPGALDYM  851 (863)
T ss_dssp             HHHGG-GTSSSEEEHHHHHHHS-------CHHHHHHHHHHSEECCSSCCCTTEEESH
T ss_pred             HHHHH-hCCCCcCcHHHHHHHC-------CHHHHHHHHHHcchhcCCCCCCCceeHH
Confidence            99999 8999999999999996       378999999999987     79999985

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=99.54  E-value=1.8e-14  Score=119.67  Aligned_cols=93  Identities=11%  Similarity=0.075  Sum_probs=85.2

Q ss_pred             hcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc----chHHHHHHHhhhhhccCcccHHHHHHHHHhh---cccC
Q 043828          487 EDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS----GADWKMASRQYSRAMMSALSIKLFKDKSMEL---TKSM  559 (586)
Q Consensus       487 ~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~----~~~~~~~F~~~D~d~~G~i~~~el~~~~~~~---g~~~  559 (586)
                      ++|..++ +++++.++..+|  ++|.|+|+||+.++..    ...++.+|+.||+|++|+|+.+||+.++..+   |..+
T Consensus         2 slg~~~~-~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~   78 (109)
T 1bu3_A            2 AFSGILA-DADVAAALKACE--AADSFNYKAFFAKVGLTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARAL   78 (109)
T ss_dssp             CCSCSSC-HHHHHHHHHHTC--STTCCCHHHHHHHHTGGGSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCC
T ss_pred             cccccCC-HHHHHHHHHHhC--CCCcCcHHHHHHHHHcChhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCC
Confidence            4677776 899999999999  8899999999999864    2679999999999999999999999999999   8889


Q ss_pred             ChhhHHHHHHhhccCCCceEecC
Q 043828          560 ELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       560 ~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      ++++++.+++.+|.|+||.|++.
T Consensus        79 ~~~~~~~~~~~~D~~~dg~i~~~  101 (109)
T 1bu3_A           79 TDAETKAFLKAGDSDGDGAIGVD  101 (109)
T ss_dssp             CHHHHHHHHHHHCTTCSSEECHH
T ss_pred             CHHHHHHHHHHhCCCCCCcEeHH
Confidence            99999999999999999999874

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=99.53  E-value=1.4e-14  Score=120.29  Aligned_cols=92  Identities=5%  Similarity=0.048  Sum_probs=83.9

Q ss_pred             cCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc----hHHHHHHHhhhhhccCcccHHHHHHHHHhh---cccCC
Q 043828          488 DNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG----ADWKMASRQYSRAMMSALSIKLFKDKSMEL---TKSME  560 (586)
Q Consensus       488 ~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~----~~~~~~F~~~D~d~~G~i~~~el~~~~~~~---g~~~~  560 (586)
                      ++..++ ++++..++..+|  ++|.|+|+||+.++...    +.++.+|+.||+|++|+|+.+||+.++..+   |..++
T Consensus         3 l~~~~~-~~ei~~~~~~~D--~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~   79 (109)
T 3fs7_A            3 ITDILS-AKDIESALSSCQ--AADSFNYKSFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLT   79 (109)
T ss_dssp             GGGTSC-HHHHHHHHHHTC--STTCCCHHHHHHHHTCTTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCCCC
T ss_pred             ccCcCC-HHHHHHHHHhcC--CCCcCcHHHHHHHHhcCCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhcccccCC
Confidence            455565 889999999998  79999999999998643    779999999999999999999999999999   88999


Q ss_pred             hhhHHHHHHhhccCCCceEecC
Q 043828          561 LNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       561 ~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +++++.+++.+|.|+||+|++.
T Consensus        80 ~~~~~~~~~~~D~~~dg~i~~~  101 (109)
T 3fs7_A           80 SAETKAFLAAGDTDGDGKIGVE  101 (109)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHH
Confidence            9999999999999999999874

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=99.53  E-value=1.7e-14  Score=119.64  Aligned_cols=92  Identities=11%  Similarity=0.040  Sum_probs=84.1

Q ss_pred             hcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc----chHHHHHHHhhhhhccCcccHHHHHHHHHhh---cccC
Q 043828          487 EDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS----GADWKMASRQYSRAMMSALSIKLFKDKSMEL---TKSM  559 (586)
Q Consensus       487 ~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~----~~~~~~~F~~~D~d~~G~i~~~el~~~~~~~---g~~~  559 (586)
                      ++|. ++ +++++.++..+|  ++|.|+|+||+.++..    ...++.+|+.||+|++|+|+.+||+.++..+   |..+
T Consensus         2 slG~-~~-~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~   77 (108)
T 2pvb_A            2 SFAG-LK-DADVAAALAACS--AADSFKHKEFFAKVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARAL   77 (108)
T ss_dssp             CCTT-SC-HHHHHHHHHHTC--STTCCCHHHHHHHHTGGGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCC
T ss_pred             CcCC-CC-HHHHHHHHHHhC--CCCcCcHHHHHHHHhCChhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCC
Confidence            4677 55 899999999999  7899999999999864    2679999999999999999999999999998   8889


Q ss_pred             ChhhHHHHHHhhccCCCceEecC
Q 043828          560 ELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       560 ~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      ++++++.+++.+|.|+||.|++.
T Consensus        78 ~~~~~~~~~~~~D~~~dg~i~~~  100 (108)
T 2pvb_A           78 TDAETKAFLADGDKDGDGMIGVD  100 (108)
T ss_dssp             CHHHHHHHHHHHCTTCSSSBCHH
T ss_pred             CHHHHHHHHHHhCCCCCCcEeHH
Confidence            99999999999999999999874

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=99.51  E-value=3.3e-14  Score=118.08  Aligned_cols=91  Identities=9%  Similarity=0.096  Sum_probs=82.9

Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc----hHHHHHHHhhhhhccCcccHHHHHHHHHhh---cccCCh
Q 043828          489 NAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG----ADWKMASRQYSRAMMSALSIKLFKDKSMEL---TKSMEL  561 (586)
Q Consensus       489 ~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~----~~~~~~F~~~D~d~~G~i~~~el~~~~~~~---g~~~~~  561 (586)
                      |..++ +++++.+++.+|.  +|.|+|+||+.++...    ..++.+|+.||+|++|+|+.+||+.++..+   |..+++
T Consensus         3 ~~~~s-~~ei~~~~~~~d~--~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~~~~   79 (109)
T 5pal_A            3 TKVLK-ADDINKAISAFKD--PGTFDYKRFFHLVGLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLND   79 (109)
T ss_dssp             GGTSC-HHHHHHHHHHTCS--TTCCCHHHHHHHHTCTTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCH
T ss_pred             CCcCC-HHHHHHHHHHhCC--CCcCcHHHHHHHHhhccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCCCCH
Confidence            44444 8899999999997  8999999999998753    779999999999999999999999999998   999999


Q ss_pred             hhHHHHHHhhccCCCceEecC
Q 043828          562 NKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       562 ~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      ++++.+++.+|.|+||.|++.
T Consensus        80 ~~~~~~~~~~D~~~dg~i~~~  100 (109)
T 5pal_A           80 TETKALLAAGDSDHDGKIGAD  100 (109)
T ss_dssp             HHHHHHHHHHCTTCSSSEEHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHH
Confidence            999999999999999999874

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=99.50  E-value=1.9e-14  Score=158.74  Aligned_cols=133  Identities=8%  Similarity=0.182  Sum_probs=101.3

Q ss_pred             hHhHHHHhhh--hccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcC-------CCCCcccHhHHHhhhhhhccC
Q 043828          385 QMAQIKQMFY--MMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADV-------DGNGLLSCDEFVTMSVHLKRI  455 (586)
Q Consensus       385 ~~~~~~~~F~--~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~-------d~dg~i~~~eF~~~~~~~~~~  455 (586)
                      ....++++|.  .||.|++|+|+..||..+|..     .+++++++++.+|.       +++|.|+|+||+.++....  
T Consensus       144 ~~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~-----~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~--  216 (799)
T 2zkm_X          144 RSTFLDKILVKLKMQLNSEGKIPVKNFFQMFPA-----DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC--  216 (799)
T ss_dssp             HHHHHHHHHHHHHHSCCTTSCEEHHHHHHHSCS-----CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS--
T ss_pred             HHHHHHHHhHHhccCCCCCCeECHHHHHHHHhh-----hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHcc--
Confidence            4567899999  899999999999999998875     37899999999985       8889999999999776543  


Q ss_pred             CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCC---------CCHHHHHHHHHHhcCC----CCCceeHHHHHHHH
Q 043828          456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGP---------NGDQTIRDILRDVDLD----RDGRISFEEFKAMM  522 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~---------~~~~~~~~~~~~~d~~----~dg~i~~~eF~~~~  522 (586)
                       ..++++++|+.||.|++|+||.+||+.+|..++...         .+++++++||+.+|.|    ++|.|+|+||..+|
T Consensus       217 -~r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~eeF~~~L  295 (799)
T 2zkm_X          217 -PRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFL  295 (799)
T ss_dssp             -CCHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHH
T ss_pred             -CHHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchhhhhhcc
Confidence             357899999999999999999999999999874332         3478899999999999    89999999999999


Q ss_pred             hcc
Q 043828          523 TSG  525 (586)
Q Consensus       523 ~~~  525 (586)
                      ...
T Consensus       296 ~S~  298 (799)
T 2zkm_X          296 CGP  298 (799)
T ss_dssp             HST
T ss_pred             cCc
Confidence            854

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=99.50  E-value=2.3e-14  Score=119.08  Aligned_cols=91  Identities=8%  Similarity=0.100  Sum_probs=82.4

Q ss_pred             CCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc----chHHHHHHHhhhhhccCcccHHHHHHHHHhh---cccCCh
Q 043828          489 NAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS----GADWKMASRQYSRAMMSALSIKLFKDKSMEL---TKSMEL  561 (586)
Q Consensus       489 ~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~----~~~~~~~F~~~D~d~~G~i~~~el~~~~~~~---g~~~~~  561 (586)
                      |..++ +++++.++..+|  ++|.|+|+||+.++..    ...++.+|+.||+|++|+|+.+||+.++..+   |..+++
T Consensus         3 g~~~t-~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~~   79 (109)
T 1rwy_A            3 TDLLS-AEDIKKAIGAFT--AADSFDHKKFFQMVGLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSA   79 (109)
T ss_dssp             HHHSC-HHHHHHHHHTTC--STTCCCHHHHHHHHTGGGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCH
T ss_pred             CCcCC-HHHHHHHHHHcC--CCCcEeHHHHHHHHhcCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCCCH
Confidence            44455 888999999998  8899999999999863    2778999999999999999999999999998   788999


Q ss_pred             hhHHHHHHhhccCCCceEecC
Q 043828          562 NKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       562 ~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      ++++.+++.+|.|+||.|++.
T Consensus        80 ~~~~~~~~~~D~~~dg~i~~~  100 (109)
T 1rwy_A           80 KETKTLMAAGDKDGDGKIGVE  100 (109)
T ss_dssp             HHHHHHHHHHCTTCSSSEEHH
T ss_pred             HHHHHHHHHHCCCCCCcCCHH
Confidence            999999999999999999974

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=99.50  E-value=1.9e-14  Score=119.71  Aligned_cols=93  Identities=13%  Similarity=0.158  Sum_probs=83.8

Q ss_pred             hcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc----chHHHHHHHhhhhhccCcccHHHHHHHHHhh---cccC
Q 043828          487 EDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS----GADWKMASRQYSRAMMSALSIKLFKDKSMEL---TKSM  559 (586)
Q Consensus       487 ~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~----~~~~~~~F~~~D~d~~G~i~~~el~~~~~~~---g~~~  559 (586)
                      ++|..++ +++++.++..+|  ++|.|+|+||+.++..    ...++.+|+.||+|++|+|+.+||+.++..+   |..+
T Consensus         2 alG~~~t-~~e~~~~~~~~d--~~g~i~~~ef~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~   78 (110)
T 1pva_A            2 AAKDLLK-ADDIKKALDAVK--AEGSFNHKKFFALVGLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDL   78 (110)
T ss_dssp             CHHHHSC-HHHHHHHHHHTC--STTCCCHHHHHHHHTCTTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCC
T ss_pred             cccccCC-HHHHHHHHHhcC--CCCcCcHHHHHHHHccCcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCC
Confidence            3455666 889999999998  8899999999999863    2779999999999999999999999999998   7889


Q ss_pred             ChhhHHHHHHhhccCCCceEecC
Q 043828          560 ELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       560 ~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      ++++++.+++.+|.|+||.|++.
T Consensus        79 ~~~~~~~~~~~~d~~~dg~i~~~  101 (110)
T 1pva_A           79 TDAETKAFLKAADKDGDGKIGID  101 (110)
T ss_dssp             CHHHHHHHHHHHCTTCSSSBCHH
T ss_pred             CHHHHHHHHHHhCCCCCCeEcHH
Confidence            99999999999999999999874

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=99.50  E-value=3.5e-14  Score=117.69  Aligned_cols=92  Identities=10%  Similarity=0.039  Sum_probs=82.7

Q ss_pred             cCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc----chHHHHHHHhhhhhccCcccHHHHHHHHHhh---cccCC
Q 043828          488 DNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS----GADWKMASRQYSRAMMSALSIKLFKDKSMEL---TKSME  560 (586)
Q Consensus       488 ~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~----~~~~~~~F~~~D~d~~G~i~~~el~~~~~~~---g~~~~  560 (586)
                      ++..++ +++++.++..+|  ++|.|+|+||+.++..    ...++.+|+.||+|++|+|+.+||+.++..+   |..++
T Consensus         2 l~~~~t-~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~   78 (108)
T 1rro_A            2 ITDILS-AEDIAAALQECQ--DPDTFEPQKFFQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELT   78 (108)
T ss_dssp             GGGTSC-HHHHHHHHHHTC--STTCCCHHHHHHHHSGGGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCC
T ss_pred             ccccCC-HHHHHHHHHHcc--CCCCcCHHHHHHHHhcCcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCCCC
Confidence            345555 889999999998  8899999999999863    2678999999999999999999999999998   68899


Q ss_pred             hhhHHHHHHhhccCCCceEecC
Q 043828          561 LNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       561 ~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +++++.+++.+|.|+||.|++.
T Consensus        79 ~~~~~~~~~~~D~~~dg~i~~~  100 (108)
T 1rro_A           79 ESETKSLMDAADNDGDGKIGAD  100 (108)
T ss_dssp             HHHHHHHHHHHCCSSSSSEEHH
T ss_pred             HHHHHHHHHHhCCCCCCcCcHH
Confidence            9999999999999999999974

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=99.47  E-value=2.4e-14  Score=123.94  Aligned_cols=86  Identities=12%  Similarity=0.156  Sum_probs=55.3

Q ss_pred             HHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHHHHHhhhhhccCcccHHHHHHHHHhhc-ccCChhhHHHHH
Q 043828          497 TIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKMASRQYSRAMMSALSIKLFKDKSMELT-KSMELNKSMELK  568 (586)
Q Consensus       497 ~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g-~~~~~~~~~~~~  568 (586)
                      .++++|..+|.|++|.|+|+||+.++...       ..++.+|+.||+|++|+|+.+||+.++..+| ..+++++++.++
T Consensus         4 ~~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e~~~~~   83 (135)
T 3h4s_E            4 TEKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMV   83 (135)
T ss_dssp             ---------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHHHHHHH
T ss_pred             hHHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHH
Confidence            35678888999999999999998887642       6688999999999999999999999999999 589999999999


Q ss_pred             HhhccCCCceEecC
Q 043828          569 KSVELKKSGQLRIP  582 (586)
Q Consensus       569 ~~~d~~~dg~i~~~  582 (586)
                      +.+|.|+||+|++.
T Consensus        84 ~~~D~d~dG~I~~~   97 (135)
T 3h4s_E           84 REGDLDGDGALNQT   97 (135)
T ss_dssp             HHHCSSCSSSBCHH
T ss_pred             HHhCCCCCCCCcHH
Confidence            99999999999874

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=99.46  E-value=4e-14  Score=156.11  Aligned_cols=120  Identities=13%  Similarity=0.130  Sum_probs=91.3

Q ss_pred             chhHHHHHHh--hhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcC-------CCCCceeHHHHHHHHhcc--
Q 043828          457 NDDILSQAFR--FFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDL-------DRDGRISFEEFKAMMTSG--  525 (586)
Q Consensus       457 ~~~~~~~~F~--~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~-------~~dg~i~~~eF~~~~~~~--  525 (586)
                      ....++++|.  .||+|++|+|+.+||..+|+.     . +++++++++++|.       +++|.|+|+||+.++...  
T Consensus       144 ~~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~-----~-~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~~  217 (799)
T 2zkm_X          144 RSTFLDKILVKLKMQLNSEGKIPVKNFFQMFPA-----D-RKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCP  217 (799)
T ss_dssp             HHHHHHHHHHHHHHSCCTTSCEEHHHHHHHSCS-----C-HHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSC
T ss_pred             HHHHHHHHhHHhccCCCCCCeECHHHHHHHHhh-----h-HHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHccC
Confidence            4567999999  899999999999999999864     2 7889999999985       788999999999988643  


Q ss_pred             -hHHHHHHHhhhhhccCcccHHHHHHHHHhh-ccc---------CChhhHHHHHHhhccC----CCceEecC
Q 043828          526 -ADWKMASRQYSRAMMSALSIKLFKDKSMEL-TKS---------MELNKSMELKKSVELK----KSGQLRIP  582 (586)
Q Consensus       526 -~~~~~~F~~~D~d~~G~i~~~el~~~~~~~-g~~---------~~~~~~~~~~~~~d~~----~dg~i~~~  582 (586)
                       ++++.+|+.||+|++|+|+++||+++|..+ |+.         ++++++++||+++|.|    +||.|++.
T Consensus       218 r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~e  289 (799)
T 2zkm_X          218 RPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPE  289 (799)
T ss_dssp             CHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHH
T ss_pred             HHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchh
Confidence             789999999999999999999999999987 776         8999999999999999    89999874

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=99.46  E-value=1.9e-14  Score=119.38  Aligned_cols=92  Identities=11%  Similarity=0.073  Sum_probs=83.5

Q ss_pred             cCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc----chHHHHHHHhhhhhccCcccHHHHHHHHHhh---cccCC
Q 043828          488 DNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS----GADWKMASRQYSRAMMSALSIKLFKDKSMEL---TKSME  560 (586)
Q Consensus       488 ~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~----~~~~~~~F~~~D~d~~G~i~~~el~~~~~~~---g~~~~  560 (586)
                      ++..++ +++++.++..+|  ++|.|+|+||+.++..    ...++.+|+.||+|++|+|+.+||+.++..+   |..++
T Consensus         2 l~~~~~-~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~   78 (108)
T 2kyc_A            2 LTDILS-PSDIAAALRDCQ--APDSFSPKKFFQISGMSKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLT   78 (108)
T ss_dssp             TTSSSC-HHHHHHHHTTSC--STTTCCHHHHHHHHTCTTCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSSSCCCCC
T ss_pred             ccccCC-HHHHHHHHHHcC--CCCcCCHHHHHHHHhhCcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhccCCCC
Confidence            455565 889999999998  8899999999999863    3679999999999999999999999999998   88899


Q ss_pred             hhhHHHHHHhhccCCCceEecC
Q 043828          561 LNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       561 ~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +++++.+++.+|.|+||+|++.
T Consensus        79 ~~~~~~~~~~~D~d~dg~i~~~  100 (108)
T 2kyc_A           79 ASETKTFLAAADHDGDGKIGAE  100 (108)
T ss_dssp             TTTTHHHHTTTCCSSSSCCCSS
T ss_pred             HHHHHHHHHHhCCCCCCcCCHH
Confidence            9999999999999999999975

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=99.45  E-value=4.1e-14  Score=123.59  Aligned_cols=96  Identities=16%  Similarity=0.257  Sum_probs=49.3

Q ss_pred             HHHHHHhcCCCCCcccHhHHHhhhhhhc-----cCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcC--------CCC
Q 043828          426 KMLMEAADVDGNGLLSCDEFVTMSVHLK-----RIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDN--------AGP  492 (586)
Q Consensus       426 ~~~~~~~D~d~dg~i~~~eF~~~~~~~~-----~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~--------~~~  492 (586)
                      ..+|..+|.|+||.|+++||+.++....     .....+.++.+|+.||+|++|+|+.+||..++..++        ...
T Consensus        30 ~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~  109 (143)
T 3a4u_B           30 FSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLM  109 (143)
T ss_dssp             ---------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------C
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCCC
Confidence            3566666777777777777765443321     123356788899999999999999999999887764        233


Q ss_pred             CCHHHHHHHH----HHhcCCCCCceeHHHHHHHH
Q 043828          493 NGDQTIRDIL----RDVDLDRDGRISFEEFKAMM  522 (586)
Q Consensus       493 ~~~~~~~~~~----~~~d~~~dg~i~~~eF~~~~  522 (586)
                      + .+++..++    ..+|.|+||.|+|+||+.++
T Consensus       110 s-~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~  142 (143)
T 3a4u_B          110 S-EDELINIIDGVLRDDDKNNDGYIDYAEFAKSL  142 (143)
T ss_dssp             C-HHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred             C-HHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence            3 66675555    88999999999999998765

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=99.43  E-value=2.1e-13  Score=110.68  Aligned_cols=72  Identities=26%  Similarity=0.597  Sum_probs=67.9

Q ss_pred             ccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhh
Q 043828          378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMS  449 (586)
Q Consensus       378 ~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~  449 (586)
                      ...+++++.++++++|+.||.|++|+|+.+||+.+|+.+|..++.++++.+|+.+|.|+||.|+|+||+.++
T Consensus        27 ~~~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m   98 (100)
T 2lv7_A           27 PVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL   98 (100)
T ss_dssp             CCCCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred             cccCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence            345778899999999999999999999999999999999999999999999999999999999999999865

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=99.42  E-value=1.8e-13  Score=114.04  Aligned_cols=101  Identities=14%  Similarity=0.256  Sum_probs=73.3

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHh-----cCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcch-HHHHHH
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLE-----DNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGA-DWKMAS  532 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~-----~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~-~~~~~F  532 (586)
                      +.++.+|+.||.| +|+|+.+||+.+|+.     ++.... ++++.++|+.+|.|+||.|+|+||+.+|.... .-.+.|
T Consensus        15 e~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~-~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~~~~he~f   92 (121)
T 4drw_A           15 ETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKD-PLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTIACNDYF   92 (121)
T ss_dssp             HHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSC-TTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCC-HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHHHHH
Confidence            5689999999998 899999999999976     566555 78899999999999999999999999998642 223444


Q ss_pred             HhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCC
Q 043828          533 RQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKS  576 (586)
Q Consensus       533 ~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~d  576 (586)
                      ....+..+++.               -++..+.++|+++|.|||
T Consensus        93 ~~~~k~~~~~~---------------~~d~~~~e~~~~~d~~gd  121 (121)
T 4drw_A           93 VVHMKQENLYF---------------QGDSTVHEILSKLSLEGD  121 (121)
T ss_dssp             TTSCC------------------------CCHHHHHHHCCC---
T ss_pred             HHHHHHhccCC---------------CCchHHHHHHHHhcccCC
Confidence            44443333222               235568889999999886

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=99.40  E-value=3.7e-13  Score=118.13  Aligned_cols=110  Identities=15%  Similarity=0.154  Sum_probs=85.9

Q ss_pred             HHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHH
Q 043828          423 PDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDIL  502 (586)
Q Consensus       423 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~  502 (586)
                      ..++.+...+..+.    .|.+|..+      ....++++.+|+.||+|++|+|+.+||..+|..+|...+ +.++..++
T Consensus        22 ~~l~~~~~~~~~~~----~~~~~~~l------~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~-~~~~~~l~   90 (147)
T 1wy9_A           22 ERLEGINKQFLDDP----KYSNDEDL------PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKT-HLELKRLI   90 (147)
T ss_dssp             HHHHHHHHHHTTCH----HHHTCTTH------HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCC-HHHHHHHH
T ss_pred             HHHHHHHHHHhcCc----chhHHHHH------HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCC-HHHHHHHH
Confidence            44566666653322    45555443      123457999999999999999999999999999988776 88999999


Q ss_pred             HHhcCCCCCceeHHHHHHHHhcc-hHHHHHHHhhhhhccCcc
Q 043828          503 RDVDLDRDGRISFEEFKAMMTSG-ADWKMASRQYSRAMMSAL  543 (586)
Q Consensus       503 ~~~d~~~dg~i~~~eF~~~~~~~-~~~~~~F~~~D~d~~G~i  543 (586)
                      ..+|.|++|.|+|+||+.++... ..+..+|+.||.|++|..
T Consensus        91 ~~~D~d~dg~I~~~eF~~~~~~~~~~~~~aF~~~D~d~~g~~  132 (147)
T 1wy9_A           91 REVSSGSEETFSYSDFLRMMLGKRSAILRMILMYEEKNKEHK  132 (147)
T ss_dssp             HHHCSSCTTEECHHHHHHHHCSSGGGGGGGGGGCCCC-----
T ss_pred             HHhCCCCCCcEeHHHHHHHHHHhHHHHHHHHHHHccCCCCCC
Confidence            99999999999999999999764 778999999999999995

>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A

Probab=99.40  E-value=2.9e-14  Score=120.73  Aligned_cols=102  Identities=24%  Similarity=0.307  Sum_probs=54.0

Q ss_pred             HHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHh-----hhhhhc-cCCchhHHHHHHhhhcCCCCCcccHHHHHHHH
Q 043828          412 GLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVT-----MSVHLK-RIGNDDILSQAFRFFDKNQSGFIEVDELKEVL  485 (586)
Q Consensus       412 ~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~-----~~~~~~-~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l  485 (586)
                      +|+.+|.+++..++..++..+    +|.|+|+||+.     ++.... .....++++++|+.||    |+|+.+||+.+|
T Consensus         1 ~lr~lG~~~t~~ei~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l   72 (123)
T 2kld_A            1 GSTAIGINDTYSEVKSDLAQQ----KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDL   72 (123)
T ss_dssp             ------------------------------------------------------CCSCSSTTTT----TCEEHHHHHHHT
T ss_pred             ChhhcCCCCCHHHHHHHHHHc----CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHH
Confidence            367789999999999999977    89999999998     443322 2233456889999999    999999999999


Q ss_pred             HhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          486 LEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       486 ~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      +.+|.   ++++++.++..+|.|+||.|+|+||+.++..
T Consensus        73 ~~lG~---t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~  108 (123)
T 2kld_A           73 KGKGH---TDAEIEAIFTKYDQDGDQELTEHEHQQMRDD  108 (123)
T ss_dssp             TTCCS---SHHHHHHHHHHHSSSSCCEECSHHHHHCSCT
T ss_pred             HHhCC---CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            99887   4899999999999999999999999998864

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=99.39  E-value=4.6e-13  Score=111.62  Aligned_cols=67  Identities=19%  Similarity=0.260  Sum_probs=61.2

Q ss_pred             hhHhHHHHhhhhccCCCCCCcCHHHHHHHHHh-----cCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNM-----IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       384 ~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~-----~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      ..++.+..+|+.||.| +|+|+.+||+.+|+.     ++...+.++++++|+.+|.|+||.|+|+||+.++..
T Consensus        12 ~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~   83 (121)
T 4drw_A           12 HAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG   83 (121)
T ss_dssp             HHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            4468899999999998 899999999999987     688889999999999999999999999999986654

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=99.39  E-value=5.9e-13  Score=117.34  Aligned_cols=89  Identities=13%  Similarity=0.281  Sum_probs=73.7

Q ss_pred             hhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHH
Q 043828          383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILS  462 (586)
Q Consensus       383 ~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~  462 (586)
                      .++..+++.+|..||.|++|+|+.+||..+|..+|..++.++++.+|..+|.|++|.|+|+||+.++...     ...+.
T Consensus        46 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~i~  120 (150)
T 2jjz_A           46 PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK-----RSAVL  120 (150)
T ss_dssp             HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS-----SCCHH
T ss_pred             HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh-----HHHHH
Confidence            5677899999999999999999999999999999999999999999999999999999999999877543     44599


Q ss_pred             HHHhhhcCCCCCcc
Q 043828          463 QAFRFFDKNQSGFI  476 (586)
Q Consensus       463 ~~F~~~D~d~~G~i  476 (586)
                      .+|+.||.|++|+-
T Consensus       121 ~aF~~~D~d~~G~~  134 (150)
T 2jjz_A          121 KLVMMFEGKANESS  134 (150)
T ss_dssp             HHHHC---------
T ss_pred             HHHHHHcCCCCCCC
Confidence            99999999999984

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.38  E-value=1.8e-12  Score=125.87  Aligned_cols=143  Identities=17%  Similarity=0.121  Sum_probs=112.9

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ....|++...++.|+.+.||++..  .+..+++|+........   ...+.+|+.+++.|..+..++++++++.+.+..|
T Consensus        12 ~l~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~   86 (263)
T 3tm0_A           12 LIEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGT---TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             HHTTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTTS---TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred             HhccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCCC---HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceE
Confidence            345789999999999999999863  46889999986532111   2358899999999966788999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE--------------------------------------  200 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~--------------------------------------  200 (586)
                      +||||++|.+|.+.+.     +......++.++..+|..||+                                      
T Consensus        87 lv~e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (263)
T 3tm0_A           87 LLMSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED  161 (263)
T ss_dssp             EEEECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred             EEEEecCCeehhhccC-----CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence            9999999999876521     222344778899999999998                                      


Q ss_pred             ---------------------cCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          201 ---------------------NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       201 ---------------------~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                                           ..++|+|++|.||++.   ....+.|+||+.+..
T Consensus       162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~---~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVK---DGKVSGFIDLGRSGR  213 (263)
T ss_dssp             CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEE---TTEEEEECCCTTCEE
T ss_pred             ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEE---CCcEEEEEEchhccc
Confidence                                 4589999999999994   344567999997654

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=99.38  E-value=4.5e-13  Score=108.68  Aligned_cols=65  Identities=31%  Similarity=0.610  Sum_probs=61.0

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      .++++++|+.||+|++|+|+.+||+.+|+.+|...+ +++++.+++.+|.|+||.|+|+||+.+|.
T Consensus        35 ~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~-~~ei~~l~~~~D~d~dG~I~~~EF~~~m~   99 (100)
T 2lv7_A           35 LEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPN-EVELEVIIQRLDMDGDGQVDFEEFVTLLG   99 (100)
T ss_dssp             HHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCC-TTTHHHHHHHHCSSCSSSBCHHHHHHHTC
T ss_pred             HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCC-HHHHHHHHHHHCCCCCCeEeHHHHHHHhC
Confidence            457999999999999999999999999999998887 78899999999999999999999999874

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.37  E-value=3.5e-13  Score=106.77  Aligned_cols=85  Identities=27%  Similarity=0.410  Sum_probs=71.6

Q ss_pred             CCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCcee
Q 043828          435 DGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRIS  514 (586)
Q Consensus       435 d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~  514 (586)
                      |++|.|+|+|++.. ... .......++.+|+.+|+|++|+|+.+||..+|+.+|...+ .+++..++..+|.|++|.|+
T Consensus         1 ~~~G~i~~~e~~~~-~~l-~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~-~~~~~~l~~~~d~~~~g~i~   77 (87)
T 1s6j_A            1 HSSGHIDDDDKHMA-ERL-SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELM-ESEIKDLMDAADIDKSGTID   77 (87)
T ss_dssp             CCSSSSSSHHHHSS-SSS-CSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCC-HHHHHHHHHHHCTTCSSEEC
T ss_pred             CCCCccCccHHHHH-HHC-CHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCcCc
Confidence            67899999995432 111 2233456899999999999999999999999999988776 88999999999999999999


Q ss_pred             HHHHHHHH
Q 043828          515 FEEFKAMM  522 (586)
Q Consensus       515 ~~eF~~~~  522 (586)
                      |+||+.++
T Consensus        78 ~~eF~~~~   85 (87)
T 1s6j_A           78 YGEFIAAT   85 (87)
T ss_dssp             HHHHTTCC
T ss_pred             HHHHHHHH
Confidence            99998764

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=99.37  E-value=6.7e-13  Score=116.50  Aligned_cols=89  Identities=16%  Similarity=0.306  Sum_probs=77.9

Q ss_pred             hhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHH
Q 043828          383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILS  462 (586)
Q Consensus       383 ~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~  462 (586)
                      .++..+++.+|..||.|++|+|+.+||..+|..+|..++..++..+|..+|.|++|.|+|+||+.++...     .+.+.
T Consensus        44 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~~~  118 (147)
T 1wy9_A           44 PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK-----RSAIL  118 (147)
T ss_dssp             HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS-----GGGGG
T ss_pred             HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh-----HHHHH
Confidence            5788899999999999999999999999999999999999999999999999999999999999876543     55688


Q ss_pred             HHHhhhcCCCCCcc
Q 043828          463 QAFRFFDKNQSGFI  476 (586)
Q Consensus       463 ~~F~~~D~d~~G~i  476 (586)
                      .+|+.||.|++|..
T Consensus       119 ~aF~~~D~d~~g~~  132 (147)
T 1wy9_A          119 RMILMYEEKNKEHK  132 (147)
T ss_dssp             GGGGGCCCC-----
T ss_pred             HHHHHHccCCCCCC
Confidence            99999999999984

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=99.32  E-value=3.2e-12  Score=100.89  Aligned_cols=85  Identities=28%  Similarity=0.484  Sum_probs=71.1

Q ss_pred             ccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCc
Q 043828          378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGN  457 (586)
Q Consensus       378 ~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~  457 (586)
                      +..+++++..+++.+|..+|.|++|+|+.+||..++..+| .++.+++..+|+.+|.|++|.|+|+||+.++.....  .
T Consensus         2 ~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~--~   78 (86)
T 2opo_A            2 AAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARANRG--L   78 (86)
T ss_dssp             ----CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHCTT--T
T ss_pred             CccCCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCcc--H
Confidence            4567788899999999999999999999999999999999 999999999999999999999999999987655432  2


Q ss_pred             hhHHHHHH
Q 043828          458 DDILSQAF  465 (586)
Q Consensus       458 ~~~~~~~F  465 (586)
                      .+.+.++|
T Consensus        79 ~~~~~~aF   86 (86)
T 2opo_A           79 VKDVSKIF   86 (86)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHhC
Confidence            34455554

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=99.32  E-value=5.7e-12  Score=100.84  Aligned_cols=86  Identities=29%  Similarity=0.556  Sum_probs=74.1

Q ss_pred             CchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCC---c
Q 043828          381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIG---N  457 (586)
Q Consensus       381 l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~---~  457 (586)
                      ...++...++.+|..+|.|++|+|+.+||..+|..+|..++.+++..+|..+|.|++|.|+|+||+.++.......   .
T Consensus         3 ~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~~~   82 (92)
T 2kn2_A            3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGNG   82 (92)
T ss_dssp             CCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTTCCCHH
T ss_pred             CCccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCCCCCch
Confidence            4566788999999999999999999999999999999999999999999999999999999999998765544332   2


Q ss_pred             hhHHHHHHh
Q 043828          458 DDILSQAFR  466 (586)
Q Consensus       458 ~~~~~~~F~  466 (586)
                      .++++.+|+
T Consensus        83 ~~~l~~aF~   91 (92)
T 2kn2_A           83 WSRLRRKFS   91 (92)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHhc
Confidence            356777764

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A

Probab=99.31  E-value=8.4e-12  Score=117.70  Aligned_cols=140  Identities=15%  Similarity=0.154  Sum_probs=106.5

Q ss_pred             hhhHhHHHHhhhhccCC-CCCCcCHHHHHHHHHhcCC--------CCC-----HHHHHHHHHHhcCCCCCcccHhHHHhh
Q 043828          383 QDQMAQIKQMFYMMDTD-KNGDLTFEELKDGLNMIGQ--------KVS-----DPDVKMLMEAADVDGNGLLSCDEFVTM  448 (586)
Q Consensus       383 ~~~~~~~~~~F~~~D~~-~~G~i~~~el~~~l~~~~~--------~~~-----~~~~~~~~~~~D~d~dg~i~~~eF~~~  448 (586)
                      .-.+..+.++|+....+ ++..++..|+..+|..+..        ...     ..-+..+|+.||.|++|.|+|.||+.+
T Consensus        78 lv~l~~~~~~f~~~~l~~~~~~l~~~~l~~~L~~lY~~l~~~~p~~v~~~~~~~~~a~~lf~~FD~~~~G~I~f~ef~~a  157 (261)
T 1eg3_A           78 LLSLSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTG  157 (261)
T ss_dssp             GCCHHHHHHHHHHTTCCCTTSEEEHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHH
T ss_pred             eeeHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHhhCcCcCCchhhHHHHHHHHHHHccCCCCceEeHHHHHHH
Confidence            33455667777775543 5668899998887665411        112     223577999999999999999999997


Q ss_pred             hhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHh-------cCCC-----CCCHHHHHHHHHHhcCCCCCceeHH
Q 043828          449 SVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLE-------DNAG-----PNGDQTIRDILRDVDLDRDGRISFE  516 (586)
Q Consensus       449 ~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~-------~~~~-----~~~~~~~~~~~~~~d~~~dg~i~~~  516 (586)
                      +.-.-....+++++-+|+.+| |+||+|+.+||..+++.       +|..     ...+..++.+|+.+|  +||.|+.+
T Consensus       158 Ls~l~rG~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d--~dg~It~~  234 (261)
T 1eg3_A          158 IISLCKAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN--NKPEIEAA  234 (261)
T ss_dssp             HHHTSSSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTT--TCSCBCHH
T ss_pred             HHHHcCCCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCC--CCCcCCHH
Confidence            776666777889999999999 99999999999998854       2221     123677888999886  78999999


Q ss_pred             HHHHHHhcc
Q 043828          517 EFKAMMTSG  525 (586)
Q Consensus       517 eF~~~~~~~  525 (586)
                      ||+..+...
T Consensus       235 EFl~~~~~d  243 (261)
T 1eg3_A          235 LFLDWMRLE  243 (261)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHHHhC
Confidence            999887754

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=99.30  E-value=8.3e-12  Score=137.52  Aligned_cols=132  Identities=9%  Similarity=0.210  Sum_probs=114.9

Q ss_pred             HhHHHHhhhh--ccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCC-------CCCcccHhHHHhhhhhhccCC
Q 043828          386 MAQIKQMFYM--MDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVD-------GNGLLSCDEFVTMSVHLKRIG  456 (586)
Q Consensus       386 ~~~~~~~F~~--~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d-------~dg~i~~~eF~~~~~~~~~~~  456 (586)
                      ...++++|..  +|.|+||.|+.+|+..+|+.     ..++++.+|+.+|.+       ++|.|+|+||..++..+.   
T Consensus       149 ~~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~-----~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~---  220 (885)
T 3ohm_B          149 NTFLRKAYTKLKLQVNQDGRIPVKNILKMFSA-----DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLC---  220 (885)
T ss_dssp             HHHHHHHHHHHHHSCCTTSCEEHHHHHHTTGG-----GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHS---
T ss_pred             HHHHHHHHHHhcCccCCCCccCHHHHHHHHhc-----CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcC---
Confidence            4568888988  89999999999999998875     467899999999987       889999999999776543   


Q ss_pred             chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCC---------CCCHHHHHHHHHHhcCC----CCCceeHHHHHHHHh
Q 043828          457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAG---------PNGDQTIRDILRDVDLD----RDGRISFEEFKAMMT  523 (586)
Q Consensus       457 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~---------~~~~~~~~~~~~~~d~~----~dg~i~~~eF~~~~~  523 (586)
                      ...+++++|+.||.+++|+||.+||..+|+..+..         ..+.+++.+||+.++.+    ++|.|++++|..+|.
T Consensus       221 ~R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~LsldgF~~yL~  300 (885)
T 3ohm_B          221 LRPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEGFSRYLG  300 (885)
T ss_dssp             CCHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHT
T ss_pred             CHHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhhhhhhcc
Confidence            35689999999999999999999999999988644         23478999999999999    789999999999998


Q ss_pred             cc
Q 043828          524 SG  525 (586)
Q Consensus       524 ~~  525 (586)
                      ..
T Consensus       301 S~  302 (885)
T 3ohm_B          301 GE  302 (885)
T ss_dssp             ST
T ss_pred             Cc
Confidence            64

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=99.26  E-value=1.8e-12  Score=113.05  Aligned_cols=57  Identities=5%  Similarity=-0.065  Sum_probs=43.2

Q ss_pred             hHHHHHHHhhhhhccCcccHHHHHHHHHhh--------cccCChhhHHHHH----HhhccCCCceEecC
Q 043828          526 ADWKMASRQYSRAMMSALSIKLFKDKSMEL--------TKSMELNKSMELK----KSVELKKSGQLRIP  582 (586)
Q Consensus       526 ~~~~~~F~~~D~d~~G~i~~~el~~~~~~~--------g~~~~~~~~~~~~----~~~d~~~dg~i~~~  582 (586)
                      +.++.+|+.||+|++|+|+.+||+.++..+        |..++.+++..++    +.+|.|+||+|++.
T Consensus        68 ~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~~s~~e~~~~~~~~f~~~D~d~dG~Is~~  136 (143)
T 3a4u_B           68 ELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGYIDYA  136 (143)
T ss_dssp             HHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------CCHHHHHHHHHHHHHHHCTTCSSEECHH
T ss_pred             HHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCCCCHHHHHHHHHHHHHHcCCCCCCcEeHH
Confidence            356777888888888888888888887766        4578888887776    99999999999874

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=99.25  E-value=9.1e-12  Score=100.53  Aligned_cols=66  Identities=15%  Similarity=0.200  Sum_probs=58.4

Q ss_pred             hhHHHHHHhhhc-CCCC-CcccHHHHHHHHHh-c----CCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          458 DDILSQAFRFFD-KNQS-GFIEVDELKEVLLE-D----NAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       458 ~~~~~~~F~~~D-~d~~-G~i~~~el~~~l~~-~----~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ...++++|+.|| +||+ |+|+.+||+.+|+. +    |...+ +++++++|+.+|.|+||.|+|+||+.++..
T Consensus         9 i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~-~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~   81 (101)
T 3nso_A            9 VAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFR-ECDYNKFMSVLDTNKDCEVDFVEYVRSLAC   81 (101)
T ss_dssp             HHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTC-HHHHHHHHHHHHHCCCSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCC-HHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            357899999997 8998 99999999999986 4    44444 889999999999999999999999999874

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=99.23  E-value=2.5e-11  Score=95.64  Aligned_cols=66  Identities=29%  Similarity=0.445  Sum_probs=60.9

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      .+.++.+|+.+|.|++|+|+.+||..+|+.+| ..+ ..++..++..+|.|+||.|+|+||+.++...
T Consensus        10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~-~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~   75 (86)
T 2opo_A           10 IADRERIFKRFDTNGDGKISSSELGDALKTLG-SVT-PDEVRRMMAEIDTDGDGFISFDEFTDFARAN   75 (86)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCC-HHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCC-HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence            46789999999999999999999999999998 555 8999999999999999999999999998754

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=99.22  E-value=1.7e-11  Score=94.69  Aligned_cols=66  Identities=27%  Similarity=0.510  Sum_probs=60.4

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      +++++.+|+.+|.|++|+|+.+||..+++.+| ..+ .+++..++..+|.|++|.|+|+||+.++...
T Consensus         2 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~~-~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~   67 (78)
T 1k9u_A            2 ADDMERIFKRFDTNGDGKISLSELTDALRTLG-STS-ADEVQRMMAEIDTDGDGFIDFNEFISFCNAN   67 (78)
T ss_dssp             -CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH-TCC-HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CCC-HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence            35689999999999999999999999999998 555 8899999999999999999999999998865

>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A

Probab=99.22  E-value=1.6e-12  Score=110.02  Aligned_cols=87  Identities=7%  Similarity=0.006  Sum_probs=47.2

Q ss_pred             HHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHH-----HHhcc-------hHHHHHHHhhhhhccCcccHHHHHHHH
Q 043828          485 LLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA-----MMTSG-------ADWKMASRQYSRAMMSALSIKLFKDKS  552 (586)
Q Consensus       485 l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~-----~~~~~-------~~~~~~F~~~D~d~~G~i~~~el~~~~  552 (586)
                      |+.+|.+++ +.++..++..+    +|.|+|+||+.     ++...       ..++.+|+.||    |+|+.+||+.++
T Consensus         2 lr~lG~~~t-~~ei~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l   72 (123)
T 2kld_A            2 STAIGINDT-YSEVKSDLAQQ----KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDL   72 (123)
T ss_dssp             ------------------------------------------------------CCSCSSTTTT----TCEEHHHHHHHT
T ss_pred             hhhcCCCCC-HHHHHHHHHHc----CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHH
Confidence            567788877 78899999877    78999999999     66532       45788999999    999999999999


Q ss_pred             HhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          553 MELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       553 ~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      ..+|.  ++++++++++++|.|+||.|++.
T Consensus        73 ~~lG~--t~~ei~~~~~~~D~d~dG~I~~~  100 (123)
T 2kld_A           73 KGKGH--TDAEIEAIFTKYDQDGDQELTEH  100 (123)
T ss_dssp             TTCCS--SHHHHHHHHHHHSSSSCCEECSH
T ss_pred             HHhCC--CHHHHHHHHHHHcCCCCCcCcHH
Confidence            99997  99999999999999999999874

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=99.21  E-value=1.5e-11  Score=99.20  Aligned_cols=68  Identities=19%  Similarity=0.149  Sum_probs=60.8

Q ss_pred             hhHhHHHHhhhhcc-CCCC-CCcCHHHHHHHHHh-----cCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          384 DQMAQIKQMFYMMD-TDKN-GDLTFEELKDGLNM-----IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       384 ~~~~~~~~~F~~~D-~~~~-G~i~~~el~~~l~~-----~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      ..+..++++|+.|| .|++ |+|+.+||+.+|+.     +|..++.++++++++.+|.|+||.|+|+||+.++..
T Consensus         7 ~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~   81 (101)
T 3nso_A            7 QAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC   81 (101)
T ss_dssp             HHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            45678999999998 8887 99999999999986     467888999999999999999999999999986543

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=99.21  E-value=4e-11  Score=95.85  Aligned_cols=67  Identities=34%  Similarity=0.742  Sum_probs=61.8

Q ss_pred             chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       457 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ..+.++.+|+.||.|++|+|+.+||..+|..+|...+ .+++..++..+|.|++|.|+|+||+.++..
T Consensus         7 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~-~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~   73 (92)
T 2kn2_A            7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLT-DEEVEQMIKEADLDGDGQVNYEEFVKMMMT   73 (92)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-HHHHHHHHHHHCSSCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            3467999999999999999999999999999988776 889999999999999999999999998864

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=99.21  E-value=2.3e-11  Score=134.08  Aligned_cols=119  Identities=16%  Similarity=0.231  Sum_probs=104.9

Q ss_pred             hhHHHHHHhh--hcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCC-------CCCceeHHHHHHHHhc---c
Q 043828          458 DDILSQAFRF--FDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLD-------RDGRISFEEFKAMMTS---G  525 (586)
Q Consensus       458 ~~~~~~~F~~--~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~-------~dg~i~~~eF~~~~~~---~  525 (586)
                      ..+++++|..  +|+|++|.|+.+|+.++|+.      ...++..+|+.+|.+       ++|.|+|+||..++..   .
T Consensus       149 ~~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~------~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~R  222 (885)
T 3ohm_B          149 NTFLRKAYTKLKLQVNQDGRIPVKNILKMFSA------DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCLR  222 (885)
T ss_dssp             HHHHHHHHHHHHHSCCTTSCEEHHHHHHTTGG------GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHhcCccCCCCccCHHHHHHHHhc------CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCCH
Confidence            4578899988  89999999999999998874      267899999999987       8899999999988764   3


Q ss_pred             hHHHHHHHhhhhhccCcccHHHHHHHHHhhc-c---------cCChhhHHHHHHhhccC----CCceEecC
Q 043828          526 ADWKMASRQYSRAMMSALSIKLFKDKSMELT-K---------SMELNKSMELKKSVELK----KSGQLRIP  582 (586)
Q Consensus       526 ~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g-~---------~~~~~~~~~~~~~~d~~----~dg~i~~~  582 (586)
                      ++++.+|+.||.+++|+|+++||+.+|...+ +         .++++++.+||+.++.+    ++|.|++.
T Consensus       223 ~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~Lsld  293 (885)
T 3ohm_B          223 PDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSME  293 (885)
T ss_dssp             HHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHH
T ss_pred             HHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchh
Confidence            8899999999999999999999999999875 4         27889999999999998    78888763

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=99.20  E-value=3.5e-11  Score=94.82  Aligned_cols=74  Identities=15%  Similarity=0.220  Sum_probs=68.3

Q ss_pred             cccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHH---HHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPD---VKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       377 ~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~---~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      +...++++++.+++++|..||.|++|+|+..||..+|..+|..++..+   +..+|..+|.|++|.|+| ||+.++..
T Consensus         4 ~~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~   80 (86)
T 1j7q_A            4 KARALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK   80 (86)
T ss_dssp             CCCCCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred             ccccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence            445677888999999999999999999999999999999999999999   999999999999999999 99986644

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=99.20  E-value=5.6e-11  Score=95.35  Aligned_cols=71  Identities=32%  Similarity=0.651  Sum_probs=64.7

Q ss_pred             ccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          453 KRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       453 ~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ......++++++|+.||.|++|+|+.+||..+|+.+|.... +++++.++..+|.|+||.|+|+||+.++..
T Consensus        23 ~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~-~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~   93 (94)
T 2kz2_A           23 KDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLT-DEEVDEMIREADIDGDGQVNYEEFVQMMTA   93 (94)
T ss_dssp             CCCSCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCC-HHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             cCCCHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence            34566788999999999999999999999999999998766 889999999999999999999999998864

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=99.20  E-value=2.1e-11  Score=97.03  Aligned_cols=75  Identities=31%  Similarity=0.574  Sum_probs=68.9

Q ss_pred             cccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       377 ~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      +...++.++...++.+|..+|.|++|+|+.+||..+|+.+|..++.+++..+|..+|.|++|.|+|+||+.++..
T Consensus        10 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~   84 (90)
T 1avs_A           10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   84 (90)
T ss_dssp             HHHHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             HHHhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            344567888999999999999999999999999999999999999999999999999999999999999986643

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=99.19  E-value=2.1e-11  Score=93.83  Aligned_cols=70  Identities=31%  Similarity=0.638  Sum_probs=65.4

Q ss_pred             chhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       382 ~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      ++++...++++|..+|.|++|.|+.+||..+++.+|..++..++..+|..+|.|++|.|+|+||+.++..
T Consensus         2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   71 (77)
T 2joj_A            2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE   71 (77)
T ss_dssp             CHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred             CHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            5677889999999999999999999999999999999999999999999999999999999999986643

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=99.19  E-value=4.1e-11  Score=89.32  Aligned_cols=64  Identities=27%  Similarity=0.496  Sum_probs=59.4

Q ss_pred             HHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          460 ILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       460 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      +++.+|+.+|+|++|+|+.+||..++..+|...+ .+++..++..+|.|++|.|+|+||+.++..
T Consensus         2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~-~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~   65 (67)
T 1tiz_A            2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFT-QEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSC-HHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCC-HHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            4788999999999999999999999999987776 889999999999999999999999998864

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=99.19  E-value=4.7e-11  Score=95.19  Aligned_cols=68  Identities=19%  Similarity=0.385  Sum_probs=57.5

Q ss_pred             hhHHHHHHhhhc-CCCC-CcccHHHHHHHHHh-cCC---CCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          458 DDILSQAFRFFD-KNQS-GFIEVDELKEVLLE-DNA---GPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       458 ~~~~~~~F~~~D-~d~~-G~i~~~el~~~l~~-~~~---~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      .+.++++|+.|| +||+ |+|+.+||+.+|+. +|.   .+.++++++++++.+|.|+||.|+|+||+.++...
T Consensus         9 ~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~   82 (93)
T 4eto_A            9 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI   82 (93)
T ss_dssp             HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence            357899999998 6885 89999999999985 652   23348899999999999999999999999998753

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.18  E-value=3.4e-11  Score=116.54  Aligned_cols=137  Identities=13%  Similarity=0.104  Sum_probs=98.7

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCC-eeEEEEEEEeCCeEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPN-IVTYKEAYEDKDAIY  158 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpn-Iv~l~~~~~~~~~~~  158 (586)
                      ...|.+....+.|..+.||++. ..+|..+++|+.....      ...+.+|+.+++.+..+.- +++++.+....+..|
T Consensus        19 ~~~~~~~~~~~gg~~~~v~~~~-~~~g~~~vlK~~~~~~------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~   91 (264)
T 1nd4_A           19 LFGYDWAQQTIGCSDAAVFRLS-AQGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDW   91 (264)
T ss_dssp             TTTCEEEECSCTTSSCEEEEEE-CTTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEE
T ss_pred             cCCCceEecccCCCCceEEEEe-cCCCCeEEEEeCCccc------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCE
Confidence            3456665544566679999985 4567789999875431      1357789999998854422 677888888888899


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcC------------------------------------
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG------------------------------------  202 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~------------------------------------  202 (586)
                      +||||++|.+|.  .   ....   ...++.++...|..||+..                                    
T Consensus        92 ~v~e~i~G~~l~--~---~~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (264)
T 1nd4_A           92 LLLGEVPGQDLL--S---SHLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ  163 (264)
T ss_dssp             EEEECCSSEETT--T---SCCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred             EEEEecCCcccC--c---CcCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhcc
Confidence            999999998883  1   1122   2245667777777777643                                    


Q ss_pred             ----------------------ceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          203 ----------------------VMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       203 ----------------------ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                                            ++|+|++|.||+++   .+..+.|+|||.+..
T Consensus       164 ~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~---~~~~~~liD~~~a~~  214 (264)
T 1nd4_A          164 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVE---NGRFSGFIDCGRLGV  214 (264)
T ss_dssp             TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEE---TTEEEEECCCTTCEE
T ss_pred             CccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEE---CCcEEEEEcchhccc
Confidence                                  99999999999994   344567999998754

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=99.18  E-value=3.6e-11  Score=99.99  Aligned_cols=89  Identities=17%  Similarity=0.198  Sum_probs=64.3

Q ss_pred             hhhHhHHHHhhhhccC-CCCC-CcCHHHHHHHHH-hcCCC-----CCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhcc
Q 043828          383 QDQMAQIKQMFYMMDT-DKNG-DLTFEELKDGLN-MIGQK-----VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKR  454 (586)
Q Consensus       383 ~~~~~~~~~~F~~~D~-~~~G-~i~~~el~~~l~-~~~~~-----~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~  454 (586)
                      .+++..++++|..||. |++| +|+.+||+.+|+ .+|..     ++..+++.+|+.+|.|+||.|+|+||+.++.... 
T Consensus         8 ~~~~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~-   86 (113)
T 1xk4_C            8 ERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLT-   86 (113)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHH-
Confidence            3456789999999995 9999 999999999999 77742     5788999999999999999999999998765432 


Q ss_pred             CCchhHHHHHHhhhcCCCCCccc
Q 043828          455 IGNDDILSQAFRFFDKNQSGFIE  477 (586)
Q Consensus       455 ~~~~~~~~~~F~~~D~d~~G~i~  477 (586)
                          ......|...| +++|.=.
T Consensus        87 ----~~~~~~f~~~~-~~~g~~~  104 (113)
T 1xk4_C           87 ----WASHEKMHEGD-EGPGHHH  104 (113)
T ss_dssp             ----HHHHC--------------
T ss_pred             ----HHHHHHHhhCC-CCCcccc
Confidence                34566788888 8888543

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=99.18  E-value=3.1e-11  Score=100.34  Aligned_cols=85  Identities=18%  Similarity=0.205  Sum_probs=61.7

Q ss_pred             hhHHHHHHhhhcC-CCCC-cccHHHHHHHHH-hcCCC---C-CCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-hHHH
Q 043828          458 DDILSQAFRFFDK-NQSG-FIEVDELKEVLL-EDNAG---P-NGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-ADWK  529 (586)
Q Consensus       458 ~~~~~~~F~~~D~-d~~G-~i~~~el~~~l~-~~~~~---~-~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-~~~~  529 (586)
                      .+.++.+|+.||. |++| +|+.+||+.+|+ .+|..   + .++.++..+|..+|.|+||.|+|+||+.++... ....
T Consensus        11 ~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~~~~~   90 (113)
T 1xk4_C           11 IETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLTWASH   90 (113)
T ss_dssp             HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHHHHHH
Confidence            3568999999995 9999 999999999999 67742   2 248899999999999999999999999998754 3445


Q ss_pred             HHHHhhhhhccCcc
Q 043828          530 MASRQYSRAMMSAL  543 (586)
Q Consensus       530 ~~F~~~D~d~~G~i  543 (586)
                      ..|...| +++|.-
T Consensus        91 ~~f~~~~-~~~g~~  103 (113)
T 1xk4_C           91 EKMHEGD-EGPGHH  103 (113)
T ss_dssp             C-------------
T ss_pred             HHHhhCC-CCCccc
Confidence            5677777 777753

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=99.18  E-value=3.7e-11  Score=99.00  Aligned_cols=66  Identities=20%  Similarity=0.453  Sum_probs=59.1

Q ss_pred             hhHHHHHHhhhc-CCCCC-cccHHHHHHHHHh-----cCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          458 DDILSQAFRFFD-KNQSG-FIEVDELKEVLLE-----DNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       458 ~~~~~~~F~~~D-~d~~G-~i~~~el~~~l~~-----~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      .++++++|+.|| +|++| +|+.+||+.+|+.     +|..++ +++++++|..+|.|+||.|+|+||+.++..
T Consensus        21 ~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t-~~ev~~li~~~D~dgdG~Idf~EF~~~m~~   93 (113)
T 2lnk_A           21 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTD-EAAFQKLMSNLDSNRDNEVDFQEYCVFLSC   93 (113)
T ss_dssp             HHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCC-TTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCC-HHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            467999999999 89997 9999999999986     565555 778999999999999999999999999874

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=99.17  E-value=4.5e-11  Score=90.30  Aligned_cols=68  Identities=32%  Similarity=0.604  Sum_probs=62.1

Q ss_pred             CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ...+.++.+|+.+|.|++|+|+.+||..++..+|...+ ..++..++..+|.|++|.|+|+||+.++..
T Consensus         3 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~-~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   70 (71)
T 2b1u_A            3 AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLP-QEELDAMIREADVDQDGRVNYEEFARMLAQ   70 (71)
T ss_dssp             TTHHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSC-HHHHHHHHHHCCSSSSSEEETTHHHHHHTC
T ss_pred             ccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence            34577999999999999999999999999999987766 889999999999999999999999998763

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=99.16  E-value=6.3e-11  Score=96.30  Aligned_cols=68  Identities=21%  Similarity=0.395  Sum_probs=58.2

Q ss_pred             hhHHHHHHhhhc-CCCC-CcccHHHHHHHHHh-cCC---CCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          458 DDILSQAFRFFD-KNQS-GFIEVDELKEVLLE-DNA---GPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       458 ~~~~~~~F~~~D-~d~~-G~i~~~el~~~l~~-~~~---~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      .++++++|+.|| .||+ |+|+.+||+.+|+. +|.   ...++++++++|+.+|.|+||.|+|+||+.++...
T Consensus        12 ~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~   85 (104)
T 3zwh_A           12 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSI   85 (104)
T ss_dssp             HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence            357899999997 7886 89999999999985 552   22348899999999999999999999999998754

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=99.16  E-value=2.9e-11  Score=132.56  Aligned_cols=125  Identities=13%  Similarity=0.222  Sum_probs=105.6

Q ss_pred             hccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHh-------cCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhh
Q 043828          395 MMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAA-------DVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRF  467 (586)
Q Consensus       395 ~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~-------D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~  467 (586)
                      .||.|+||.|+.+|+...++..+.  ...++.++++..       |.+++|.|+|+||..++..+.   ..++++++|+.
T Consensus       163 ~fd~n~dG~Is~kEl~~~l~~~~~--~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~---~R~EI~eiF~~  237 (816)
T 3qr0_A          163 TTVEMEKNKIPVKAIQKCLSKDKD--DRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALL---ERSEIEGIFKE  237 (816)
T ss_dssp             HHTSCCSSEEEHHHHHHHHCSCHH--HHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHC---CCTHHHHHHHH
T ss_pred             hccCCCCCCCCHHHHHHHHHhcCC--hHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcC---CHHHHHHHHHH
Confidence            489999999999999998876431  145688899988       678899999999999776653   45689999999


Q ss_pred             hcCCCCCcccHHHHHHHHHhcCCCC---------CCHHHHHHHHHHhcC--C----CCCceeHHHHHHHHhcc
Q 043828          468 FDKNQSGFIEVDELKEVLLEDNAGP---------NGDQTIRDILRDVDL--D----RDGRISFEEFKAMMTSG  525 (586)
Q Consensus       468 ~D~d~~G~i~~~el~~~l~~~~~~~---------~~~~~~~~~~~~~d~--~----~dg~i~~~eF~~~~~~~  525 (586)
                      ||.|++|.||. ||..+|+..+...         .+.+++.++++.++.  |    ++|.|++++|..+|...
T Consensus       238 y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL~S~  309 (816)
T 3qr0_A          238 LSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMCE  309 (816)
T ss_dssp             HTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHHHSG
T ss_pred             HccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchhhhccCCccHHHHHHHhhcc
Confidence            99999999999 9999999987443         348889999999887  5    78999999999999854

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=99.16  E-value=6.3e-11  Score=97.66  Aligned_cols=69  Identities=16%  Similarity=0.295  Sum_probs=62.2

Q ss_pred             hhhHhHHHHhhhhcc-CCCCC-CcCHHHHHHHHHh-----cCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          383 QDQMAQIKQMFYMMD-TDKNG-DLTFEELKDGLNM-----IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       383 ~~~~~~~~~~F~~~D-~~~~G-~i~~~el~~~l~~-----~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      .+++.+++++|+.|| .|++| +|+.+||+.+|+.     +|..+++++++.+++.+|.|+||.|+|+||+.++..
T Consensus        18 ~~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~   93 (113)
T 2lnk_A           18 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC   93 (113)
T ss_dssp             HHHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            456788999999999 89997 9999999999986     677889999999999999999999999999986643

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=99.15  E-value=5.1e-11  Score=95.11  Aligned_cols=68  Identities=21%  Similarity=0.246  Sum_probs=62.4

Q ss_pred             CchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhh
Q 043828          381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSV  450 (586)
Q Consensus       381 l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  450 (586)
                      ++.++..+++++|..||.|++|+|+.+||+.+++.+|  ++.+++.++++.+|.|+||.|+|+||+.++.
T Consensus         3 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~   70 (92)
T 1fi6_A            3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAFH   70 (92)
T ss_dssp             CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence            3567889999999999999999999999999999886  6789999999999999999999999998654

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=99.14  E-value=5.6e-11  Score=95.47  Aligned_cols=68  Identities=19%  Similarity=0.251  Sum_probs=62.3

Q ss_pred             CchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhh
Q 043828          381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSV  450 (586)
Q Consensus       381 l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  450 (586)
                      ++.++.++++++|..||.|++|+|+.+||+.+++.+|  ++.+++..+|+.+|.|+||.|+|+||+.++.
T Consensus         4 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~   71 (95)
T 1c07_A            4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFH   71 (95)
T ss_dssp             SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence            4567889999999999999999999999999999886  6789999999999999999999999998653

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=99.14  E-value=9.2e-11  Score=95.31  Aligned_cols=69  Identities=14%  Similarity=0.241  Sum_probs=59.6

Q ss_pred             hhhHhHHHHhhhhcc-CCCC-CCcCHHHHHHHHHh-cC----CCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          383 QDQMAQIKQMFYMMD-TDKN-GDLTFEELKDGLNM-IG----QKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       383 ~~~~~~~~~~F~~~D-~~~~-G~i~~~el~~~l~~-~~----~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      +..+..++++|+.|| .|++ |+|+.+||+.+|+. +|    ..++.++++++|+.+|.|+||.|+|+||+.++..
T Consensus         9 e~~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~   84 (104)
T 3zwh_A            9 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSS   84 (104)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence            345688999999998 6775 89999999999985 54    4568999999999999999999999999986644

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=99.14  E-value=6.1e-11  Score=88.39  Aligned_cols=63  Identities=30%  Similarity=0.527  Sum_probs=59.6

Q ss_pred             HHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhh
Q 043828          388 QIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSV  450 (586)
Q Consensus       388 ~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  450 (586)
                      +++++|..+|.|++|.|+.+||..++..+|..++.+++..+|..+|.|++|.|+|+||+.++.
T Consensus         2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~   64 (67)
T 1tiz_A            2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE   64 (67)
T ss_dssp             THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            578999999999999999999999999999999999999999999999999999999998654

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=99.13  E-value=9.8e-11  Score=93.35  Aligned_cols=69  Identities=14%  Similarity=0.236  Sum_probs=58.5

Q ss_pred             hhhHhHHHHhhhhcc-CCCC-CCcCHHHHHHHHHh-cC----CCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          383 QDQMAQIKQMFYMMD-TDKN-GDLTFEELKDGLNM-IG----QKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       383 ~~~~~~~~~~F~~~D-~~~~-G~i~~~el~~~l~~-~~----~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      +..+..++++|+.|| .|++ |+|+.+||+.+++. +|    ...+.++++++++.+|.|+||.|+|+||+.++..
T Consensus         6 e~~~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~   81 (93)
T 4eto_A            6 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC   81 (93)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence            345688999999998 6775 89999999999985 54    4568899999999999999999999999986644

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=99.13  E-value=9.1e-11  Score=90.20  Aligned_cols=66  Identities=27%  Similarity=0.505  Sum_probs=61.0

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      .+.++.+|+.+|+|++|+|+.+||..+|+.+|...+ ..++..++..+|.|++|.|+|+||+.++..
T Consensus         6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~-~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   71 (77)
T 2joj_A            6 KQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVK-KPEILELMNEYDREGNGYIGFDDFLDIMTE   71 (77)
T ss_dssp             HHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCH-HHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred             HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCC-HHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            456899999999999999999999999999988776 888999999999999999999999998863

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=99.13  E-value=1.2e-10  Score=94.13  Aligned_cols=67  Identities=22%  Similarity=0.366  Sum_probs=59.2

Q ss_pred             hhHHHHHHhhhc-CCCCC-cccHHHHHHHHHh-----cCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          458 DDILSQAFRFFD-KNQSG-FIEVDELKEVLLE-----DNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       458 ~~~~~~~F~~~D-~d~~G-~i~~~el~~~l~~-----~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      .+.++++|+.|| +|++| +|+.+||+.+|+.     +|...+ +.+++.++..+|.|+||.|+|+||+.++...
T Consensus         9 ~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~-~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~   82 (99)
T 2y5i_A            9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKD-PMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL   82 (99)
T ss_dssp             HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCC-HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhcccccc-HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence            457999999997 89998 9999999999986     555555 8899999999999999999999999998753

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=99.12  E-value=9e-11  Score=93.35  Aligned_cols=66  Identities=33%  Similarity=0.510  Sum_probs=61.3

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ...++.+|+.||+|++|+|+.+||..+|+.+|...+ ..++..++..+|.|++|.|+|+||+.++..
T Consensus        19 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~-~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~   84 (90)
T 1avs_A           19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPT-KEELDAIIEEVDEDGSGTIDFEEFLVMMVR   84 (90)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-HHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            457899999999999999999999999999998776 889999999999999999999999998863

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=99.12  E-value=1.2e-10  Score=93.49  Aligned_cols=67  Identities=33%  Similarity=0.628  Sum_probs=62.3

Q ss_pred             hhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhh
Q 043828          384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSV  450 (586)
Q Consensus       384 ~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  450 (586)
                      +..++++++|..||.|++|+|+.+||..+|..+|..++.++++.+|+.+|.|++|.|+|+||+.++.
T Consensus        26 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~   92 (94)
T 2kz2_A           26 DSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT   92 (94)
T ss_dssp             SCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            3456789999999999999999999999999999999999999999999999999999999988653

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.12  E-value=4.5e-11  Score=94.41  Aligned_cols=73  Identities=38%  Similarity=0.795  Sum_probs=66.3

Q ss_pred             cccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhh
Q 043828          377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMS  449 (586)
Q Consensus       377 ~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~  449 (586)
                      +...+..++...++++|..+|.|++|+|+.+||..++..+|..++.+++..+|+.+|.|++|.|+|+||+.++
T Consensus        13 ~~~~l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~   85 (87)
T 1s6j_A           13 MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             SSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HHHHCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            3445566677889999999999999999999999999999999999999999999999999999999998754

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=99.11  E-value=1.8e-10  Score=93.03  Aligned_cols=67  Identities=19%  Similarity=0.359  Sum_probs=57.2

Q ss_pred             hhHHHHHHhhhcCCC---CCcccHHHHHHHHHhcCCCCC----CHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          458 DDILSQAFRFFDKNQ---SGFIEVDELKEVLLEDNAGPN----GDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~---~G~i~~~el~~~l~~~~~~~~----~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      .++++++|+.||.++   +|+|+.+||+.+|+.++....    .+++++++|+.+|.|+||.|+|+||+.+|..
T Consensus        10 i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~   83 (100)
T 3nxa_A           10 VIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGG   83 (100)
T ss_dssp             HHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            357999999999964   799999999999987543322    2678999999999999999999999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	586
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-89
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	7e-89
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	6e-86
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	5e-83
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-82
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	6e-82
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-81
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-79
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	9e-79
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-77
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	9e-77
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-76
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-75
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-72
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-72
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	7e-71
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-70
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-69
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-68
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	8e-68
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-67
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	6e-66
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-64
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	6e-63
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-61
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-61
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	7e-61
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-60
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	4e-60
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-60
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-59
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-59
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-58
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-58
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	4e-58
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	4e-58
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-57
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	1e-56
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-56
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-55
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	6e-55
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	1e-54
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-54
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-54
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-54
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	4e-53
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	4e-53
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	9e-53
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	5e-52
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-51
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-51
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-51
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-50
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-50
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-49
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	6e-48
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	4e-46
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	9e-46
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-45
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	3e-44
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	5e-44
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	4e-38
d1exra_	146	a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr	4e-26
d1exra_	146	a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr	1e-05
d1lkja_	146	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	5e-26
d1topa_	162	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	8e-25
d1s6ia_	182	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	1e-22
d2obha1	141	a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien	1e-22
d2obha1	141	a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien	1e-05
d1dtla_	156	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	7e-22
d1bjfa_	181	a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId	1e-21
d1bjfa_	181	a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId	1e-06
d1jbaa_	189	a.39.1.5 (A:) Guanylate cyclase activating protein	4e-20
d1jbaa_	189	a.39.1.5 (A:) Guanylate cyclase activating protein	2e-05
d1g8ia_	187	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	5e-20
d1g8ia_	187	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	1e-06
d2pvba_	107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	3e-19
d2pvba_	107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	5e-10
d1pvaa_	109	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	3e-19
d1pvaa_	109	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	6e-11
d1rroa_	108	a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus)	2e-18
d1rroa_	108	a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus)	9e-11
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	3e-18
d1qxpa2	188	a.39.1.8 (A:515-702) Calpain large subunit, C-term	6e-18
d1qxpa2	188	a.39.1.8 (A:515-702) Calpain large subunit, C-term	3e-12
d1qxpa2	188	a.39.1.8 (A:515-702) Calpain large subunit, C-term	6e-06
d5pala_	109	a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis	7e-18
d5pala_	109	a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis	2e-10
d1fpwa_	190	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	2e-17
d1fpwa_	190	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	4e-09
d2zfda1	183	a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {	2e-17
d1w7jb1	139	a.39.1.5 (B:11-149) Myosin Essential Chain {Human	3e-17
d1w7jb1	139	a.39.1.5 (B:11-149) Myosin Essential Chain {Human	1e-08
d1rwya_	109	a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta	4e-17
d1rwya_	109	a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta	4e-10
d1s6ja_	87	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	6e-17
d1s6ja_	87	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	1e-11
d1s6ca_	178	a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera	3e-16
d1s6ca_	178	a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera	2e-07
d1k94a_	165	a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta	5e-16
d1k94a_	165	a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta	1e-12
d1k94a_	165	a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta	1e-11
d1k94a_	165	a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta	2e-08
d1df0a1	186	a.39.1.8 (A:515-700) Calpain large subunit, C-term	7e-16
d1df0a1	186	a.39.1.8 (A:515-700) Calpain large subunit, C-term	1e-09
d2scpa_	174	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	7e-16
d2scpa_	174	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	0.001
d1wdcb_	142	a.39.1.5 (B:) Myosin Essential Chain {Bay scallop	1e-15
d1wdcc_	152	a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop	1e-15
d1nyaa_	176	a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth	2e-15
d1nyaa_	176	a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth	2e-06
d1nyaa_	176	a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth	6e-05
d1juoa_	172	a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId:	4e-15
d1c7va_	68	a.39.1.5 (A:) Calcium vector protein {Amphioxus (B	5e-15
d1c7va_	68	a.39.1.5 (A:) Calcium vector protein {Amphioxus (B	6e-12
d1c7va_	68	a.39.1.5 (A:) Calcium vector protein {Amphioxus (B	0.002
d1xo5a_	180	a.39.1.5 (A:) Calcium- and integrin-binding protei	1e-14
d1uhka1	187	a.39.1.5 (A:3-189) Calcium-regulated photoprotein	1e-14
d1uhka1	187	a.39.1.5 (A:3-189) Calcium-regulated photoprotein	2e-06
d1ggwa_	140	a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharo	1e-14
d1f54a_	77	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	5e-14
d1f54a_	77	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	2e-10
d1wrka1	82	a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens)	5e-14
d1wrka1	82	a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens)	1e-09
d2sasa_	185	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	7e-14
d2sasa_	185	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	2e-04
d2sasa_	185	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	5e-04
d1jfja_	134	a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly	2e-13
d1jc2a_	75	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	3e-13
d1jc2a_	75	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	3e-10
d1jc2a_	75	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	5e-04
d1alva_	173	a.39.1.8 (A:) Calpain small (regulatory) subunit (	3e-13
d1alva_	173	a.39.1.8 (A:) Calpain small (regulatory) subunit (	3e-08
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	3e-13
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	2e-12
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	8e-05
d1auib_	165	a.39.1.5 (B:) Calcineurin regulatory subunit (B-ch	4e-13
d1m45a_	146	a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye	6e-13
d1m45a_	146	a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye	6e-04
d1qv0a_	189	a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr	9e-13
d1qv0a_	189	a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr	2e-06
d1tiza_	67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	1e-12
d1tiza_	67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	2e-11
d1tiza_	67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	7e-05
d1omra_	201	a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId:	1e-12
d1omra_	201	a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId:	1e-06
d1avsa_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	2e-12
d1avsa_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	2e-11
d1avsa_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	0.004
d1fi5a_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus),	3e-12
d1fi5a_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus),	6e-11
d1fi5a_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus),	7e-04
d2pq3a1	73	a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T	4e-12
d2pq3a1	73	a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T	2e-10
d2opoa1	81	a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che	4e-12
d2opoa1	81	a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che	3e-10
d1ij5a_	321	a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind	6e-12
d1ij5a_	321	a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind	5e-11
d2zkmx1	170	a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human	2e-11
d1cb1a_	78	a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax	8e-11
d1cb1a_	78	a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax	3e-08
d1fw4a_	65	a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId:	8e-11
d1fw4a_	65	a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId:	3e-10
d1fw4a_	65	a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId:	7e-04
d1xk4a1	87	a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa	3e-10
d1xk4a1	87	a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa	2e-06
d1a4pa_	92	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	1e-09
d1a4pa_	92	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	1e-07
d3c1va1	93	a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa	2e-09
d3c1va1	93	a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa	3e-08
d1snla_	99	a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo	3e-09
d1snla_	99	a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo	1e-08
d1ksoa_	93	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	3e-09
d1ksoa_	93	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	6e-06
d2fcea1	61	a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [	4e-09
d2fcea1	61	a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [	1e-08
d1y1xa_	182	a.39.1.8 (A:) Programmed cell death 6 protein-like	5e-09
d1y1xa_	182	a.39.1.8 (A:) Programmed cell death 6 protein-like	1e-06
d1hqva_	181	a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous	9e-09
d1hqva_	181	a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous	5e-04
d1yuta1	98	a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa	1e-08
d1yuta1	98	a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa	2e-05
d1qx2a_	76	a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax	2e-08
d1qx2a_	76	a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax	4e-06
d1k8ua_	89	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	2e-08
d1k8ua_	89	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	1e-04
d1wlza1	83	a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H	2e-08
d1wlza1	83	a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H	4e-07
d1zfsa1	93	a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no	3e-08
d1zfsa1	93	a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no	2e-06
d1c07a_	95	a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId:	6e-08
d1c07a_	95	a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId:	5e-07
d1psra_	100	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	3e-07
d1psra_	100	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	9e-06
d1qjta_	99	a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId:	6e-07
d1qjta_	99	a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId:	2e-04
d1e8aa_	87	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	1e-06
d2jxca1	95	a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [	1e-06
d2jxca1	95	a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [	0.001
d1fi6a_	92	a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId:	1e-06
d1fi6a_	92	a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId:	2e-04
d2pula1	392	d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {	4e-06
d2hf5a1	33	a.39.1.5 (A:81-113) Troponin C {Human (Homo sapien	2e-05
d1iq3a_	110	a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9	3e-04
d1iq3a_	110	a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9	5e-04
d1ctda_	34	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	4e-04
d1qlsa_	95	a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa),	0.002
d3cr5x1	90	a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos tauru	0.003
d1j55a_	94	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	0.003

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  277 bits (709), Expect = 1e-89
 Identities = 113/297 (38%), Positives = 171/297 (57%), Gaps = 5/297 (1%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           +I D Y F   LG G F       +  T +  A K IAK+ L+       +  E+ ++  
Sbjct: 6   DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG--KEGSMENEIAVLHK 63

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
           + KHPNIV   + YE    +YL+M+L  GGELFDRIV KG YTER A+ +   +L  VK 
Sbjct: 64  I-KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 122

Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR 257
            H+ G++HRDLKPEN L+    E+S++   DFGLS    PG       G+P Y+APEVL 
Sbjct: 123 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA 182

Query: 258 -RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            + Y   +D WS GVI YILLCG PPF+ E +  +   I++ + +F+   W  +S  AK+
Sbjct: 183 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKD 242

Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKV 373
            ++++++ +P  R T E+ L++PWI  D  A + ++  +V+ +IK+    +K+K+  
Sbjct: 243 FIRHLMEKDPEKRFTCEQALQHPWIAGDT-ALDKNIHQSVSEQIKKNFAKSKWKQAF 298

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  276 bits (708), Expect = 7e-89
 Identities = 108/323 (33%), Positives = 167/323 (51%), Gaps = 17/323 (5%)

Query: 73  NPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
              +G++ D Y   +ELG G FG+ H+C E  TG  +  K I        +D   V+ E+
Sbjct: 21  EVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEI 77

Query: 133 EIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTI 191
            IM  L  HP ++   +A+EDK  + L++E   GGELFDRI  + +  +E       +  
Sbjct: 78  SIMNQL-HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQA 136

Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYM 251
              +K  HE+ ++H D+KPEN +  +  + S +K IDFGL+    P E       +  + 
Sbjct: 137 CEGLKHMHEHSIVHLDIKPENIMC-ETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFA 195

Query: 252 APEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           APE++ R   G   D+W+ GV+ Y+LL G+ PF  E +      + R   +F+ D +  V
Sbjct: 196 APEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSV 255

Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFK 370
           S EAK+ +KN+L   P  RLT+ + LE+PW+K D+         N+TSRI   S  NK +
Sbjct: 256 SPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS--------NLTSRIPS-SRYNKIR 306

Query: 371 KKVLRVVAD-NLPQDQMAQIKQM 392
           +K+    AD   PQ  + +I   
Sbjct: 307 QKIKEKYADWPAPQPAIGRIANF 329

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  269 bits (688), Expect = 6e-86
 Identities = 85/272 (31%), Positives = 146/272 (53%), Gaps = 7/272 (2%)

Query: 76  EGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
             ++LD Y   +ELG G FG+ H+  E  TG  +A K +       E D + VR+E++ M
Sbjct: 21  HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTM 77

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRI 194
             L +HP +V   +A+ED + + ++ E   GGELF+++ ++    +E  A    + + + 
Sbjct: 78  SVL-RHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG 136

Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +   HEN  +H DLKPEN +F     +++LK IDFGL+    P +      G+  + APE
Sbjct: 137 LCHMHENNYVHLDLKPENIMFTTK-RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPE 195

Query: 255 VLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           V   +  G   D+WS GV+ YILL G+ PF  E ++     +     + +   +  +S++
Sbjct: 196 VAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISED 255

Query: 314 AKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
            K+ ++ +L  +P  R+T+ + LE+PW+   N
Sbjct: 256 GKDFIRKLLLADPNTRMTIHQALEHPWLTPGN 287

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  260 bits (666), Expect = 5e-83
 Identities = 86/302 (28%), Positives = 154/302 (50%), Gaps = 12/302 (3%)

Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
           + +KY   ++LGRGEFGI H+C E  + +TY  K +  +      D   V++E+ I+   
Sbjct: 3   LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIA 58

Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKV 197
            +H NI+   E++E  + + ++ E   G ++F+RI        ER   +    +   ++ 
Sbjct: 59  -RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQF 117

Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR 257
            H + + H D++PEN ++     +S +K I+FG +   KPG+ F  +  +P Y APEV +
Sbjct: 118 LHSHNIGHFDIRPENIIY-QTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQ 176

Query: 258 RN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            +      D+WS G ++Y+LL G+ PF AET + I   I+  +  F+ + + ++S EA +
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236

Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRV 376
            V  +L     +R+T  E L++PW+K      +  +       +K     +   KK L +
Sbjct: 237 FVDRLLVKERKSRMTASEALQHPWLKQKIERVSTKV----IRTLKHRRYYHTLIKKDLNM 292

Query: 377 VA 378
           V 
Sbjct: 293 VV 294

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  256 bits (655), Expect = 4e-82
 Identities = 91/275 (33%), Positives = 138/275 (50%), Gaps = 16/275 (5%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT------EIDIDDVRREVEI 134
           + Y   + LGRG   +  +C    T + YA K I      +      +   +   +EV+I
Sbjct: 3   ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 62

Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           +R +  HPNI+  K+ YE     +LV +L + GELFD +  K   +E+    + + +L +
Sbjct: 63  LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 122

Query: 195 VKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPE 254
           +   H+  ++HRDLKPEN L     ++  +K  DFG S    PGE+  E+ G+P Y+APE
Sbjct: 123 ICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 179

Query: 255 VL-------RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
           ++          YG E+D+WS GVI+Y LL G PPFW   +  +   I+ G   F    W
Sbjct: 180 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEW 239

Query: 308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
              S   K+LV   L   P  R T EE L +P+ +
Sbjct: 240 DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 274

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  256 bits (656), Expect = 6e-82
 Identities = 101/273 (36%), Positives = 153/273 (56%), Gaps = 6/273 (2%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE---IDIDDVRREVEI 134
           N+ D Y  G+ELG G+F +  +C E  TG  YA K I K + K+    +  +D+ REV I
Sbjct: 7   NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66

Query: 135 MRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRI 194
           ++ + +HPN++T  E YE+K  + L++EL  GGELFD +  K   TE  A    K IL  
Sbjct: 67  LKEI-QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG 125

Query: 195 VKVCHENGVMHRDLKPENFLFA-DGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
           V   H   + H DLKPEN +         ++K IDFGL+     G +F  I G+P ++AP
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAP 185

Query: 254 EVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK 312
           E++     G E D+WS GVI YILL G  PF  +T++     +     +FE + +   S 
Sbjct: 186 EIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSA 245

Query: 313 EAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN 345
            AK+ ++ +L  +P  R+T+++ L++PWIK  +
Sbjct: 246 LAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 278

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  253 bits (647), Expect = 5e-81
 Identities = 85/267 (31%), Positives = 136/267 (50%), Gaps = 10/267 (3%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L+ +  G+ LG+G+FG  +   E ++    A K + K +L+       +RREVEI  HL 
Sbjct: 5   LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL- 63

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HPNI+     + D   +YL++E    G ++  +     + E+  A     +   +  CH
Sbjct: 64  RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 123

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              V+HRD+KPEN L        +LK  DFG S+   P  +   + G+  Y+ PE++  R
Sbjct: 124 SKRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRTTLCGTLDYLPPEMIEGR 179

Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            +  ++D+WS GV+ Y  L G PPF A T +     I R +  F       V++ A++L+
Sbjct: 180 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF----PDFVTEGARDLI 235

Query: 319 KNMLDPNPYNRLTLEEVLENPWIKNDN 345
             +L  NP  R  L EVLE+PWI  ++
Sbjct: 236 SRLLKHNPSQRPMLREVLEHPWITANS 262

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  251 bits (641), Expect = 1e-79
 Identities = 85/291 (29%), Positives = 153/291 (52%), Gaps = 14/291 (4%)

Query: 63  ISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           I  +LRS+VS    G+   KYT  +++G+G  G  +   ++ TG+  A +++    L+ +
Sbjct: 5   ILEKLRSIVS---VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQ 58

Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTER 182
              + +  E+ +MR   K+PNIV Y ++Y   D +++VME   GG L D +V +    E 
Sbjct: 59  PKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEG 116

Query: 183 AAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK-PGEQF 241
             AAV +  L+ ++  H N V+HRD+K +N L      +  +K  DFG          + 
Sbjct: 117 QIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPEQSKR 173

Query: 242 CEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI 300
             +VG+PY+MAPEV+ R  YGP++D+WS G++   ++ G PP+  E      + I     
Sbjct: 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT 233

Query: 301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVS 351
              ++P  K+S   ++ +   LD +   R + +E+L++ ++K      +++
Sbjct: 234 PELQNP-EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLT 283

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  248 bits (634), Expect = 9e-79
 Identities = 81/267 (30%), Positives = 127/267 (47%), Gaps = 12/267 (4%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + + FGK LG G F       E+ T   YA K + K  +  E  +  V RE ++M  L  
Sbjct: 8   EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-D 66

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HP  V     ++D + +Y  +   + GEL   I   G + E         I+  ++  H 
Sbjct: 67  HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 126

Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC---EIVGSPYYMAPEVLR 257
            G++HRDLKPEN L    +E+  ++  DFG +    P  +       VG+  Y++PE+L 
Sbjct: 127 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 183

Query: 258 -RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
            ++     D+W+ G IIY L+ G+PPF A  E  I   II+ + DF      K   +A++
Sbjct: 184 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDF----PEKFFPKARD 239

Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKN 343
           LV+ +L  +   RL  EE+     +K 
Sbjct: 240 LVEKLLVLDATKRLGCEEMEGYGPLKA 266

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  244 bits (623), Expect = 2e-77
 Identities = 73/270 (27%), Positives = 129/270 (47%), Gaps = 12/270 (4%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++ +   + LG G +G         T E  A K +  ++       +++++E+ I + L 
Sbjct: 4   VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKML- 60

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
            H N+V +     + +  YL +E C GGELFDRI       E  A      ++  V   H
Sbjct: 61  NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVL 256
             G+ HRD+KPEN L     E   LK  DFGL+  F+   +     ++ G+  Y+APE+L
Sbjct: 121 GIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177

Query: 257 RRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           +R   +   +DVWS G+++  +L G  P+   ++    ++  + K  +  +PW K+    
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY-LNPWKKIDSAP 236

Query: 315 KELVKNMLDPNPYNRLTLEEVLENPWIKND 344
             L+  +L  NP  R+T+ ++ ++ W    
Sbjct: 237 LALLHKILVENPSARITIPDIKKDRWYNKP 266

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  243 bits (622), Expect = 9e-77
 Identities = 73/299 (24%), Positives = 130/299 (43%), Gaps = 15/299 (5%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
             ++  +E+G G FG  +   ++   E  A KK++    ++     D+ +EV  ++ L +
Sbjct: 15  KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-R 73

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
           HPN + Y+  Y  +   +LVME C G       V+K    E   AAV    L+ +   H 
Sbjct: 74  HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS 133

Query: 201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR--- 257
           + ++HRD+K  N L    SE   +K  DFG +    P   F    G+PY+MAPEV+    
Sbjct: 134 HNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPANSFV---GTPYWMAPEVILAMD 187

Query: 258 -RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
              Y  ++DVWS G+    L    PP +        + I +   +         S+  + 
Sbjct: 188 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--ESPALQSGHWSEYFRN 245

Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLR 375
            V + L   P +R T E +L++ ++  +   P   +   +         ++  + + ++
Sbjct: 246 FVDSCLQKIPQDRPTSEVLLKHRFVLRER--PPTVIMDLIQRTKDAVRELDNLQYRKMK 302

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  242 bits (620), Expect = 1e-76
 Identities = 78/279 (27%), Positives = 134/279 (48%), Gaps = 16/279 (5%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           N  D +    ELG G FG  ++    ET    A K I     K+E +++D   E++I+  
Sbjct: 9   NPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVI---DTKSEEELEDYMVEIDILAS 65

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVK 196
              HPNIV   +A+  ++ +++++E C GG +   ++      TE     V K  L  + 
Sbjct: 66  C-DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 124

Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-KPGEQFCEIVGSPYYMAPEV 255
             H+N ++HRDLK  N LF   + +  +K  DFG+S    +  ++    +G+PY+MAPEV
Sbjct: 125 YLHDNKIIHRDLKAGNILF---TLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEV 181

Query: 256 L------RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
           +       R Y  + DVWS G+ +  +    PP        +   I + +      P  +
Sbjct: 182 VMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SR 240

Query: 310 VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAP 348
            S   K+ +K  L+ N   R T  ++L++P++  D++ P
Sbjct: 241 WSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNKP 279

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  241 bits (616), Expect = 2e-75
 Identities = 104/329 (31%), Positives = 161/329 (48%), Gaps = 21/329 (6%)

Query: 76  EGNILDKYTF-GKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEI 134
           +  I+D Y    + LG G  G   Q F   T E +A K +              RREVE+
Sbjct: 6   KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP--------KARREVEL 57

Query: 135 MRHLPKHPNIVTYKEAYED----KDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVG 188
                + P+IV   + YE+    +  + +VME  +GGELF RI ++G   +TER A+ + 
Sbjct: 58  HWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 117

Query: 189 KTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSP 248
           K+I   ++  H   + HRD+KPEN L+     N+ LK  DFG +              +P
Sbjct: 118 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP 177

Query: 249 YYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETE----EGIAHAIIRGKIDFE 303
           YY+APEVL    Y    D+WS GVI+YILLCG PPF++        G+   I  G+ +F 
Sbjct: 178 YYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP 237

Query: 304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVTSRIKQF 363
              W +VS+E K L++N+L   P  R+T+ E + +PWI      P   L  +   +  + 
Sbjct: 238 NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKE 297

Query: 364 SIMNKFKKKVLRVVADNLPQDQMAQIKQM 392
              +  K+++   +A      +  +IK++
Sbjct: 298 RWED-VKEEMTSALATMRVDYEQIKIKKI 325

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  231 bits (590), Expect = 2e-72
 Identities = 60/266 (22%), Positives = 116/266 (43%), Gaps = 12/266 (4%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHP 142
             F  E+GRG F   ++  + ET    A  ++   KL T+ +    + E E+++ L +HP
Sbjct: 11  LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGL-QHP 68

Query: 143 NIVTYKEAYED----KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
           NIV + +++E     K  I LV EL   G L   +        +   +  + IL+ ++  
Sbjct: 69  NIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFL 128

Query: 199 HENG--VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
           H     ++HRDLK +N           +K  D GL+   K       ++G+P +MAPE+ 
Sbjct: 129 HTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLATL-KRASFAKAVIGTPEFMAPEMY 185

Query: 257 RRNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE 316
              Y   +DV++ G+ +  +     P+         +  +   +            E KE
Sbjct: 186 EEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA-SFDKVAIPEVKE 244

Query: 317 LVKNMLDPNPYNRLTLEEVLENPWIK 342
           +++  +  N   R +++++L + + +
Sbjct: 245 IIEGCIRQNKDERYSIKDLLNHAFFQ 270

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  230 bits (588), Expect = 3e-72
 Identities = 88/274 (32%), Positives = 133/274 (48%), Gaps = 21/274 (7%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           + Y     +G G +G   +      G+    K++    + TE +   +  EV ++R L K
Sbjct: 4   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLREL-K 61

Query: 141 HPNIVTYKEAYEDK--DAIYLVMELCEGGELFDRIVN----KGHYTERAAAAVGKTILRI 194
           HPNIV Y +   D+    +Y+VME CEGG+L   I      + +  E     V   +   
Sbjct: 62  HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 121

Query: 195 VKVCHE-----NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFC-EIVGSP 248
           +K CH      + V+HRDLKP N           +K  DFGL+        F    VG+P
Sbjct: 122 LKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDTSFAKAFVGTP 178

Query: 249 YYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW 307
           YYM+PE + R  Y  + D+WS G ++Y L   +PPF A +++ +A  I  GK    R   
Sbjct: 179 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF---RRIP 235

Query: 308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI 341
            + S E  E++  ML+   Y+R ++EE+LENP I
Sbjct: 236 YRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 269

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  228 bits (583), Expect = 7e-71
 Identities = 70/269 (26%), Positives = 130/269 (48%), Gaps = 10/269 (3%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++ +   K LG+G FG        +T + +A K + K+ +  + D++    E  ++    
Sbjct: 1   IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 60

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HP +      ++ K+ ++ VME   GG+L   I +   +    A      I+  ++  H
Sbjct: 61  EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 120

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-QFCEIVGSPYYMAPEVLR- 257
             G+++RDLK +N L     ++  +K  DFG+      G+ +     G+P Y+APE+L  
Sbjct: 121 SKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLG 177

Query: 258 RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
           + Y   +D WS GV++Y +L G  PF  + EE + H+I      + R     + KEAK+L
Sbjct: 178 QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRW----LEKEAKDL 233

Query: 318 VKNMLDPNPYNRLTLE-EVLENPWIKNDN 345
           +  +    P  RL +  ++ ++P  +  N
Sbjct: 234 LVKLFVREPEKRLGVRGDIRQHPLFREIN 262

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  226 bits (578), Expect = 1e-70
 Identities = 63/271 (23%), Positives = 113/271 (41%), Gaps = 7/271 (2%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           ++ D+Y  G+ LG G     H   ++      A K +  +  +        RRE +    
Sbjct: 4   HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 63

Query: 138 LPKHPNIVTYKEAYEDKDA----IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILR 193
           L  HP IV   +  E +       Y+VME  +G  L D +  +G  T + A  V     +
Sbjct: 64  L-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 122

Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG-LSIFFKPGEQFCEIVGSPYYMA 252
            +   H+NG++HRD+KP N + +  +    +       ++       Q   ++G+  Y++
Sbjct: 123 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 182

Query: 253 PEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
           PE  R  +     DV+S G ++Y +L G PPF  ++   +A+  +R            +S
Sbjct: 183 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 242

Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
            +   +V   L  NP NR      +    ++
Sbjct: 243 ADLDAVVLKALAKNPENRYQTAAEMRADLVR 273

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  225 bits (575), Expect = 1e-69
 Identities = 70/323 (21%), Positives = 119/323 (36%), Gaps = 50/323 (15%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           D +    ELG G  G+  +     +G   A K I  E        + + RE++++     
Sbjct: 6   DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHEC-N 62

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE 200
            P IV +  A+     I + ME  +GG L   +   G   E+    V   +++ +    E
Sbjct: 63  SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122

Query: 201 -NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
            + +MHRD+KP N L    +   ++K  DFG+S            VG+  YM+PE L+  
Sbjct: 123 KHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGT 178

Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRG-------------------- 298
           +Y  + D+WS G+ +  +  G  P      + +                           
Sbjct: 179 HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLS 238

Query: 299 --------------------KIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN 338
                                    + P    S E ++ V   L  NP  R  L++++ +
Sbjct: 239 SYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298

Query: 339 PWIKNDNHAPNVSLGGNVTSRIK 361
            +IK  + A  V   G + S I 
Sbjct: 299 AFIKR-SDAEEVDFAGWLCSTIG 320

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  220 bits (561), Expect = 4e-68
 Identities = 79/272 (29%), Positives = 132/272 (48%), Gaps = 20/272 (7%)

Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDD---VRREVEIM 135
           +  +Y  G  LG G FG  +    +      A K + K+++    ++ +   V  EV ++
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61

Query: 136 RHL-PKHPNIVTYKEAYEDKDAIYLVMELCEGG-ELFDRIVNKGHYTERAAAAVGKTILR 193
           + +      ++   + +E  D+  L++E  E   +LFD I  +G   E  A +    +L 
Sbjct: 62  KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121

Query: 194 IVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAP 253
            V+ CH  GV+HRD+K EN L        +LK IDFG     K    + +  G+  Y  P
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDL--NRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPP 178

Query: 254 EVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS 311
           E +R  R +G    VWS G+++Y ++CG  PF  + E      IIRG++ F      +VS
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR----QRVS 228

Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
            E + L++  L   P +R T EE+  +PW+++
Sbjct: 229 SECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  222 bits (566), Expect = 8e-68
 Identities = 71/275 (25%), Positives = 128/275 (46%), Gaps = 14/275 (5%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMR--H 137
           ++ ++  + +GRG FG  + C + +TG+ YA K + K+++K +        E  ++    
Sbjct: 3   MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 62

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKV 197
               P IV    A+   D +  +++L  GG+L   +   G ++E         I+  ++ 
Sbjct: 63  TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 122

Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR 257
            H   V++RDLKP N L     E+  ++  D GL+  F   +     VG+  YMAPEVL+
Sbjct: 123 MHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSKKKPHA-SVGTHGYMAPEVLQ 178

Query: 258 RN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
           +   Y    D +S G +++ LL G  PF     +   H I R  +    +     S E +
Sbjct: 179 KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRMTLTMAVELPDSFSPELR 237

Query: 316 ELVKNMLDPNPYNRLTL-----EEVLENPWIKNDN 345
            L++ +L  +   RL       +EV E+P+ ++ +
Sbjct: 238 SLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 272

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  218 bits (557), Expect = 5e-67
 Identities = 72/272 (26%), Positives = 123/272 (45%), Gaps = 16/272 (5%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           L  +   + LG G FG  H       G  YA K + KE +     ++    E  ++  + 
Sbjct: 3   LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV- 61

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
            HP I+     ++D   I+++M+  EGGELF  +     +    A      +   ++  H
Sbjct: 62  THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH 121

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-R 258
              +++RDLKPEN L     +N  +K  DFG + +    +    + G+P Y+APEV+  +
Sbjct: 122 SKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVP--DVTYTLCGTPDYIAPEVVSTK 176

Query: 259 NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
            Y   ID WS G++IY +L G  PF+          I+  ++ F     P  +++ K+L+
Sbjct: 177 PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRF----PPFFNEDVKDLL 232

Query: 319 KNMLDPNPYNRL-----TLEEVLENPWIKNDN 345
             ++  +   RL       E+V  +PW K   
Sbjct: 233 SRLITRDLSQRLGNLQNGTEDVKNHPWFKEVV 264

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  216 bits (551), Expect = 6e-66
 Identities = 83/273 (30%), Positives = 136/273 (49%), Gaps = 15/273 (5%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++ + + K LG+G FG      E  TG  YA K + KE +  + ++     E  ++++  
Sbjct: 4   MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT- 62

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           +HP +   K A++  D +  VME   GGELF  +  +  +TE  A   G  I+  ++  H
Sbjct: 63  RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVLRR 258
              V++RD+K EN +     ++  +K  DFGL       G       G+P Y+APEVL  
Sbjct: 123 SRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED 179

Query: 259 N-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL 317
           N YG  +D W  GV++Y ++CG  PF+ +  E +   I+  +I F       +S EAK L
Sbjct: 180 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRF----PRTLSPEAKSL 235

Query: 318 VKNMLDPNPYNRL-----TLEEVLENPWIKNDN 345
           +  +L  +P  RL       +EV+E+ +  + N
Sbjct: 236 LAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  209 bits (533), Expect = 4e-64
 Identities = 57/267 (21%), Positives = 106/267 (39%), Gaps = 19/267 (7%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
            + T G+ +G G FG  ++    +     A K +       +  +   + EV ++R   +
Sbjct: 8   GQITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQ-QLQAFKNEVGVLRKT-R 62

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRI-VNKGHYTERAAAAVGKTILRIVKVCH 199
           H NI+ +   Y     + +V + CEG  L+  + + +  +       + +   + +   H
Sbjct: 63  HVNILLF-MGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH 121

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE---QFCEIVGSPYYMAPEVL 256
              ++HRDLK  N       E+  +K  DFGL+          QF ++ GS  +MAPEV+
Sbjct: 122 AKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178

Query: 257 RRN----YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP--WPKV 310
           R      Y  + DV++ G+++Y L+ G  P+           ++                
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 238

Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLE 337
            K  K L+   L      R    ++L 
Sbjct: 239 PKAMKRLMAECLKKKRDERPLFPQILA 265

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  207 bits (527), Expect = 6e-63
 Identities = 73/287 (25%), Positives = 116/287 (40%), Gaps = 33/287 (11%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID--IDDVRREVEIMRHLPKHPNI 144
             LG G+F   ++  +  T +  A KKI         D       RE+++++ L  HPNI
Sbjct: 4   DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNI 62

Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
           +   +A+  K  I LV +  E         N    T     A     L+ ++  H++ ++
Sbjct: 63  IGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL 122

Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSIFF-KPGEQFCEIVGSPYYMAPEVLR--RNYG 261
           HRDLKP N L     EN  LK  DFGL+  F  P   +   V + +Y APE+L   R YG
Sbjct: 123 HRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYG 179

Query: 262 PEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP------------- 308
             +D+W+ G I+  LL  VP    +++      I         + WP             
Sbjct: 180 VGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKS 239

Query: 309 -----------KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND 344
                          +  +L++ +   NP  R+T  + L+  +  N 
Sbjct: 240 FPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR 286

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  204 bits (519), Expect = 1e-61
 Identities = 77/308 (25%), Positives = 125/308 (40%), Gaps = 48/308 (15%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           + KY    ++G+G FG   +    +TG+  A KK+  E  K E       RE++I++ L 
Sbjct: 9   VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLL- 66

Query: 140 KHPNIVTYKEAYEDKDA--------IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTI 191
           KH N+V   E    K +        IYLV + CE             +T      V + +
Sbjct: 67  KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 126

Query: 192 LRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE-----QFCEIVG 246
           L  +   H N ++HRD+K  N L    + +  LK  DFGL+  F   +     ++   V 
Sbjct: 127 LNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYTNRVV 183

Query: 247 SPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER 304
           + +Y  PE+L   R+YGP ID+W AG I+  +    P     TE+     I +       
Sbjct: 184 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 243

Query: 305 DPWPKV----------------------------SKEAKELVKNMLDPNPYNRLTLEEVL 336
           + WP V                               A +L+  +L  +P  R+  ++ L
Sbjct: 244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 303

Query: 337 ENPWIKND 344
            + +  +D
Sbjct: 304 NHDFFWSD 311

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  203 bits (518), Expect = 3e-61
 Identities = 76/280 (27%), Positives = 138/280 (49%), Gaps = 17/280 (6%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEI---ETGETYACKKIAKEKL-KTEIDIDDVRREVEIM 135
           ++ +   K LG G +G      +I   +TG+ YA K + K  + +     +  R E +++
Sbjct: 23  IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 82

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIV 195
            H+ + P +VT   A++ +  ++L+++   GGELF  +  +  +TE         I+  +
Sbjct: 83  EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLAL 142

Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP--GEQFCEIVGSPYYMAP 253
           +  H+ G+++RD+K EN L      N  +   DFGLS  F     E+  +  G+  YMAP
Sbjct: 143 EHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 199

Query: 254 EVLR---RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           +++R     +   +D WS GV++Y LL G  PF  + E+     I R  +  E     ++
Sbjct: 200 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEM 259

Query: 311 SKEAKELVKNMLDPNPYNRL-----TLEEVLENPWIKNDN 345
           S  AK+L++ +L  +P  RL       +E+ E+ + +  N
Sbjct: 260 SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN 299

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  203 bits (517), Expect = 7e-61
 Identities = 84/326 (25%), Positives = 130/326 (39%), Gaps = 50/326 (15%)

Query: 66  QLRSVVSNPAEGN---ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE 122
           ++ +VV+ P +G        YT  K +G G FG+ +Q    ++GE  A KK+ ++K    
Sbjct: 2   KVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---- 57

Query: 123 IDIDDVRREVEIMRHLPKHPNIVTYKEAY------EDKDAIYLVMELCEGG---ELFDRI 173
                  RE++IMR L  H NIV  +  +      +D+  + LV++              
Sbjct: 58  ---RFKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 113

Query: 174 VNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI 233
             K              + R +   H  G+ HRD+KP+N L     + + LK  DFG + 
Sbjct: 114 RAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAK 171

Query: 234 FFKPGEQFCEIVGSPYYMAPEVLRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGI 291
               GE     + S YY APE++     Y   IDVWSAG ++  LL G P F  ++    
Sbjct: 172 QLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ 231

Query: 292 AHAIIRG-------------------------KIDFERDPWPKVSKEAKELVKNMLDPNP 326
              II+                             + +   P+   EA  L   +L+  P
Sbjct: 232 LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTP 291

Query: 327 YNRLTLEEVLENPWIKNDNHAPNVSL 352
             RLT  E   + +   +   PNV L
Sbjct: 292 TARLTPLEACAHSFFD-ELRDPNVKL 316

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  202 bits (514), Expect = 1e-60
 Identities = 78/332 (23%), Positives = 137/332 (41%), Gaps = 50/332 (15%)

Query: 50  SVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETY 109
           S ++  ++V+      +     S+  E    D Y   ++LGRG++    +   I   E  
Sbjct: 5   SRARVYTDVNTHRPR-EYWDYESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKV 63

Query: 110 ACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA--IYLVMELCEGG 167
             K +   K K       ++RE++I+ +L   PNI+T  +  +D  +    LV E     
Sbjct: 64  VVKILKPVKKK------KIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNT 117

Query: 168 ELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI 227
           +           T+         IL+ +  CH  G+MHRD+KP N +     E+ +L+ I
Sbjct: 118 DFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI--DHEHRKLRLI 172

Query: 228 DFGLSIFFKPGEQFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWA 285
           D+GL+ F+ PG+++   V S Y+  PE+L   + Y   +D+WS G ++  ++    PF+ 
Sbjct: 173 DWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 232

Query: 286 ETEEGIAHAIIR------------GKIDFERDP----------------------WPKVS 311
             +       I              K + E DP                         VS
Sbjct: 233 GHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS 292

Query: 312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
            EA + +  +L  +  +RLT  E +E+P+   
Sbjct: 293 PEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 324

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  201 bits (512), Expect = 4e-60
 Identities = 85/317 (26%), Positives = 149/317 (47%), Gaps = 23/317 (7%)

Query: 35  NDASSKKPSPSPKHESVSKHASNVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEF 94
           N A++KK S   + ESV +  +    K+    L+   +       LD++   K LG G F
Sbjct: 2   NAAAAKKGS---EQESVKEFLA----KAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSF 54

Query: 95  GITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK 154
           G        E+G  YA K + K+K+     I+    E  I++ +   P +V  + +++D 
Sbjct: 55  GRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDN 113

Query: 155 DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFL 214
             +Y+VME   GGE+F  +   G ++E  A      I+   +  H   +++RDLKPEN L
Sbjct: 114 SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173

Query: 215 FADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVII 273
                +   ++  DFG +   K   +   + G+P  +APE++  + Y   +D W+ GV+I
Sbjct: 174 I---DQQGYIQVTDFGFAKRVK--GRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLI 228

Query: 274 YILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRL--- 330
           Y +  G PPF+A+    I   I+ GK+ F        S + K+L++N+L  +   R    
Sbjct: 229 YEMAAGYPPFFADQPIQIYEKIVSGKVRF----PSHFSSDLKDLLRNLLQVDLTKRFGNL 284

Query: 331 --TLEEVLENPWIKNDN 345
              + ++  + W    +
Sbjct: 285 KNGVNDIKNHKWFATTD 301

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  199 bits (506), Expect = 4e-60
 Identities = 80/291 (27%), Positives = 127/291 (43%), Gaps = 34/291 (11%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++KY   +++G G +G+ ++      GET+A KKI  EK   E       RE+ I++ L 
Sbjct: 1   MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKED-EGIPSTTIREISILKEL- 57

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           KH NIV   +    K  + LV E  +        V +G      A +    +L  +  CH
Sbjct: 58  KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-KPGEQFCEIVGSPYYMAPEVLRR 258
           +  V+HRDLKP+N L    +   +LK  DFGL+  F  P  ++   + + +Y AP+VL  
Sbjct: 118 DRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMG 174

Query: 259 N--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP-------- 308
           +  Y   ID+WS G I   ++ G P F   +E      I R         WP        
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234

Query: 309 -----------------KVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIK 342
                             + +   +L+  ML  +P  R+T ++ LE+ + K
Sbjct: 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (506), Expect = 3e-59
 Identities = 70/304 (23%), Positives = 120/304 (39%), Gaps = 46/304 (15%)

Query: 78  NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           ++  +YT    +G G +G+    ++       A KKI+  + +T        RE++I+  
Sbjct: 5   DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQT--YCQRTLREIKILLR 62

Query: 138 LPKHPNIVTYKEAYEDKDA-----IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTIL 192
             +H NI+   +            +YLV  L        +++   H +          IL
Sbjct: 63  F-RHENIIGINDIIRAPTIEQMKDVYLVTHLMGAD--LYKLLKTQHLSNDHICYFLYQIL 119

Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE----QFCEIVGSP 248
           R +K  H   V+HRDLKP N L    +    LK  DFGL+    P         E V + 
Sbjct: 120 RGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 176

Query: 249 YYMAPEVLRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP 306
           +Y APE++  +  Y   ID+WS G I+  +L   P F  +      + I+       ++ 
Sbjct: 177 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 236

Query: 307 W---------------------------PKVSKEAKELVKNMLDPNPYNRLTLEEVLENP 339
                                       P    +A +L+  ML  NP+ R+ +E+ L +P
Sbjct: 237 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 296

Query: 340 WIKN 343
           +++ 
Sbjct: 297 YLEQ 300

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  197 bits (502), Expect = 3e-59
 Identities = 71/303 (23%), Positives = 128/303 (42%), Gaps = 35/303 (11%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           ++ +   +++G G +G+ ++     TGE  A KKI  +  +TE       RE+ +++ L 
Sbjct: 1   MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL- 58

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCE-GGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
            HPNIV   +    ++ +YLV E      + F               +    +L+ +  C
Sbjct: 59  NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF-KPGEQFCEIVGSPYYMAPEVLR 257
           H + V+HRDLKP+N L    +    +K  DFGL+  F  P   +   V + +Y APE+L 
Sbjct: 119 HSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175

Query: 258 RN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW-------- 307
               Y   +D+WS G I   ++     F  ++E      I R     +   W        
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235

Query: 308 -----------------PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNH-APN 349
                            P + ++ + L+  ML  +P  R++ +  L +P+ ++     P+
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPH 295

Query: 350 VSL 352
           + L
Sbjct: 296 LRL 298

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  196 bits (498), Expect = 3e-58
 Identities = 59/288 (20%), Positives = 107/288 (37%), Gaps = 36/288 (12%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEID---IDDVRREVEIMRH 137
           +   FGK LG G FG           +T    ++A + LK + D    + +  E+++M  
Sbjct: 37  ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 96

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH------------------- 178
           L  H NIV    A      IYL+ E C  G+L + + +K                     
Sbjct: 97  LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 156

Query: 179 ----YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF 234
                T          + + ++       +HRDL   N L    +    +K  DFGL+  
Sbjct: 157 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLV---THGKVVKICDFGLARD 213

Query: 235 FKPGEQF---CEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEE 289
                 +           +MAPE L    Y  + DVWS G++++ I   GV P+     +
Sbjct: 214 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 273

Query: 290 GIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
              + +I+     ++  +   ++E   ++++    +   R +   +  
Sbjct: 274 ANFYKLIQNGFKMDQPFY--ATEEIYIIMQSCWAFDSRKRPSFPNLTS 319

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  194 bits (494), Expect = 4e-58
 Identities = 47/281 (16%), Positives = 95/281 (33%), Gaps = 21/281 (7%)

Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL 138
           + ++Y  G+++G G FG  +   +I  GE  A K    +          +  E +I + +
Sbjct: 5   VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-----KHPQLHIESKIYKMM 59

Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
                I T +    + D   +VMEL               ++ +    +   ++  ++  
Sbjct: 60  QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI 119

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE--------QFCEIVGSPYY 250
           H    +HRD+KP+NFL   G + + +  IDFGL+  ++           +   + G+  Y
Sbjct: 120 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARY 179

Query: 251 MAPEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP--- 306
            +             D+ S G ++     G  P+             R        P   
Sbjct: 180 ASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV 239

Query: 307 -WPKVSKEAKELVKNMLDPNPYNRLT---LEEVLENPWIKN 343
                  E    +         ++     L ++  N + + 
Sbjct: 240 LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 280

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  195 bits (495), Expect = 4e-58
 Identities = 66/295 (22%), Positives = 121/295 (41%), Gaps = 35/295 (11%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL-- 138
            +Y    E+G G +G   +  +++ G  +   K  + +   E       REV ++RHL  
Sbjct: 7   QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 66

Query: 139 PKHPNIVTYKEAY-----EDKDAIYLVMELCEGGEL-FDRIVNKGHYTERAAAAVGKTIL 192
            +HPN+V   +       + +  + LV E  +     +   V +          +   +L
Sbjct: 67  FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 126

Query: 193 RIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMA 252
           R +   H + V+HRDLKP+N L    + + Q+K  DFGL+  +        +V + +Y A
Sbjct: 127 RGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 183

Query: 253 PEVLRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-- 309
           PEVL ++ Y   +D+WS G I   +    P F   ++      I+        + WP+  
Sbjct: 184 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDV 243

Query: 310 ---------------------VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                                + +  K+L+   L  NP  R++    L +P+ ++
Sbjct: 244 ALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 298

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  194 bits (493), Expect = 4e-58
 Identities = 75/293 (25%), Positives = 122/293 (41%), Gaps = 34/293 (11%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           + KY   +++G G +G   +    ET E  A K++  +    E       RE+ +++ L 
Sbjct: 1   MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD-EGVPSSALREICLLKEL- 58

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCH 199
           KH NIV   +       + LV E C+           G        +    +L+ +  CH
Sbjct: 59  KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLS-IFFKPGEQFCEIVGSPYYMAPEVL-- 256
              V+HRDLKP+N L    + N +LK  +FGL+  F  P   +   V + +Y  P+VL  
Sbjct: 119 SRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175

Query: 257 RRNYGPEIDVWSAGVIIYILLCG-VPPFWAETEEGIAHAIIRGKIDFERDPW-------- 307
            + Y   ID+WSAG I   L     P F     +     I R       + W        
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235

Query: 308 -----------------PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN 343
                            PK++   ++L++N+L  NP  R++ EE L++P+  +
Sbjct: 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  190 bits (485), Expect = 3e-57
 Identities = 57/263 (21%), Positives = 103/263 (39%), Gaps = 21/263 (7%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
           + +    + +G+GEFG          G   A K I  +             E  +M  L 
Sbjct: 6   MKELKLLQTIGKGEFGDVMLG--DYRGNKVAVKCIKNDA-----TAQAFLAEASVMTQL- 57

Query: 140 KHPNIVTYKEA-YEDKDAIYLVMELCEGGELFDRIVNKGH--YTERAAAAVGKTILRIVK 196
           +H N+V       E+K  +Y+V E    G L D + ++G               +   ++
Sbjct: 58  RHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAME 117

Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVL 256
               N  +HRDL   N L    SE++  K  DFGL+      +   +      + APE L
Sbjct: 118 YLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEASSTQDTGK--LPVKWTAPEAL 172

Query: 257 R-RNYGPEIDVWSAGVIIYILL-CGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           R + +  + DVWS G++++ +   G  P+     + +   + +G   ++ D         
Sbjct: 173 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG---YKMDAPDGCPPAV 229

Query: 315 KELVKNMLDPNPYNRLTLEEVLE 337
            E++KN    +   R +  ++ E
Sbjct: 230 YEVMKNCWHLDAAMRPSFLQLRE 252

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  192 bits (488), Expect = 1e-56
 Identities = 63/312 (20%), Positives = 119/312 (38%), Gaps = 44/312 (14%)

Query: 73  NPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
                 +   Y   + +G G +G      +  TG   A KK+ +     E+      RE+
Sbjct: 10  TKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQS-ELFAKRAYREL 68

Query: 133 EIMRHLPKHPNIVTYKEAYEDKDA------IYLVMELCEGGELFDRIVNKGHYTERAAAA 186
            +++H+ +H N++   + +   +        YLVM     G    +++      E     
Sbjct: 69  RLLKHM-RHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQF 125

Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVG 246
           +   +L+ ++  H  G++HRDLKP N      +E+ +LK +DFGL+       +    V 
Sbjct: 126 LVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGLARQ--ADSEMTGYVV 180

Query: 247 SPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER 304
           + +Y APEV+     Y   +D+WS G I+  ++ G   F           I++       
Sbjct: 181 TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPA 240

Query: 305 DPW---------------------------PKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
           +                                S  A  L++ ML  +   R+T  E L 
Sbjct: 241 EFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 300

Query: 338 NPWIKNDNHAPN 349
           +P+ ++ +   +
Sbjct: 301 HPYFESLHDTED 312

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  188 bits (479), Expect = 3e-56
 Identities = 63/273 (23%), Positives = 106/273 (38%), Gaps = 22/273 (8%)

Query: 87  KELGRGEFGITHQCF--EIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNI 144
           KELG G FG   + +    +  +T A K +  E        D++  E  +M+ L  +P I
Sbjct: 13  KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND-PALKDELLAEANVMQQL-DNPYI 70

Query: 145 VTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVM 204
           V      E  ++  LVME+ E G L   +    H  ++    +   +   +K   E+  +
Sbjct: 71  VRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFV 129

Query: 205 HRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE----IVGSPYYMAPEVLRRN- 259
           HRDL   N L          K  DFGLS   +  E + +          + APE +    
Sbjct: 130 HRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 186

Query: 260 YGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV 318
           +  + DVWS GV+++     G  P+       +   + +G+            +E  +L+
Sbjct: 187 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM---GCPAGCPREMYDLM 243

Query: 319 KNMLDPNPYNRLTLEEV---LENPW--IKNDNH 346
                 +  NR     V   L N +  + N+ H
Sbjct: 244 NLCWTYDVENRPGFAAVELRLRNYYYDVVNEGH 276

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  187 bits (475), Expect = 1e-55
 Identities = 55/268 (20%), Positives = 91/268 (33%), Gaps = 17/268 (6%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIET---GETYACKKIAKEKLKTEIDIDDVRREVEIMR 136
                  ++LG G FG+  +           + A K +  + L     +DD  REV  M 
Sbjct: 7   EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMH 66

Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIV 195
            L  H N++           + +V EL   G L DR+    GH+     +     +   +
Sbjct: 67  SL-DHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 124

Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE----IVGSPYYM 251
                   +HRDL   N L    +    +K  DFGL       +              + 
Sbjct: 125 GYLESKRFIHRDLAARNLLL---ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181

Query: 252 APEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
           APE L+ R +    D W  GV ++ +   G  P+       I H I +      R     
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR--PED 239

Query: 310 VSKEAKELVKNMLDPNPYNRLTLEEVLE 337
             ++   ++       P +R T   + +
Sbjct: 240 CPQDIYNVMVQCWAHKPEDRPTFVALRD 267

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  184 bits (468), Expect = 6e-55
 Identities = 58/264 (21%), Positives = 103/264 (39%), Gaps = 19/264 (7%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
              TF KELG G+FG+     +       A K I +      +  D+   E ++M +L  
Sbjct: 4   KDLTFLKELGTGQFGVVKYG-KWRGQYDVAIKMIKEGS----MSEDEFIEEAKVMMNL-S 57

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCH 199
           H  +V        +  I+++ E    G L + +      +  +    + K +   ++   
Sbjct: 58  HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE 117

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE--QFCEIVGSPYYMAPEVLR 257
               +HRDL   N L    ++   +K  DFGLS +    E            +  PEVL 
Sbjct: 118 SKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM 174

Query: 258 RN-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPK-VSKEA 314
            + +  + D+W+ GV+++ I   G  P+   T    A  I +G     R   P   S++ 
Sbjct: 175 YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL----RLYRPHLASEKV 230

Query: 315 KELVKNMLDPNPYNRLTLEEVLEN 338
             ++ +        R T + +L N
Sbjct: 231 YTIMYSCWHEKADERPTFKILLSN 254

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  187 bits (474), Expect = 1e-54
 Identities = 71/312 (22%), Positives = 127/312 (40%), Gaps = 45/312 (14%)

Query: 73  NPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREV 132
           N     + ++Y     +G G +G     F+ +TG   A KK+++   ++ I      RE+
Sbjct: 10  NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYREL 68

Query: 133 EIMRHLPKHPNIVTYKEAYEDKDA------IYLVMELCEGGELFDRIVNKGHYTERAAAA 186
            +++H+ KH N++   + +    +      +YLV  L   G   + IV     T+     
Sbjct: 69  RLLKHM-KHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQF 125

Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVG 246
           +   ILR +K  H   ++HRDLKP N      +E+ +LK +DFGL+      ++    V 
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLARHT--DDEMTGYVA 180

Query: 247 SPYYMAPEVLRRN--YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE- 303
           + +Y APE++     Y   +D+WS G I+  LL G   F           I+R       
Sbjct: 181 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 240

Query: 304 --------------------------RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
                                      + +   +  A +L++ ML  +   R+T  + L 
Sbjct: 241 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 300

Query: 338 NPWIKNDNHAPN 349
           + +     H P+
Sbjct: 301 HAYFA-QYHDPD 311

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  184 bits (467), Expect = 1e-54
 Identities = 62/262 (23%), Positives = 104/262 (39%), Gaps = 17/262 (6%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
            + TF +E+G G+FG+ H  + +   +  A K I +  +  E    D   E E+M  L  
Sbjct: 5   SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEE----DFIEEAEVMMKL-S 58

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH-YTERAAAAVGKTILRIVKVCH 199
           HP +V       ++  I LV E  E G L D +  +   +       +   +   +    
Sbjct: 59  HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 118

Query: 200 ENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE--QFCEIVGSPYYMAPEVLR 257
           E  V+HRDL   N L     EN  +K  DFG++ F    +            + +PEV  
Sbjct: 119 EACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 175

Query: 258 RN-YGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK 315
            + Y  + DVWS GV+++ +   G  P+   +   +   I  G   F        S    
Sbjct: 176 FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG---FRLYKPRLASTHVY 232

Query: 316 ELVKNMLDPNPYNRLTLEEVLE 337
           +++ +     P +R     +L 
Sbjct: 233 QIMNHCWKERPEDRPAFSRLLR 254

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  184 bits (468), Expect = 2e-54
 Identities = 62/292 (21%), Positives = 109/292 (37%), Gaps = 19/292 (6%)

Query: 66  QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAK-EKLKTEID 124
                V   A+   +      + +G GEFG          G+      I   +   TE  
Sbjct: 11  DPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ 70

Query: 125 IDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK-GHYTERA 183
             D   E  IM     HPN++  +        + ++ E  E G L   +    G +T   
Sbjct: 71  RRDFLSEASIMGQF-DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQ 129

Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ--- 240
              + + I   +K   +   +HRDL   N L    + N   K  DFGLS F +       
Sbjct: 130 LVGMLRGIAAGMKYLADMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFLEDDTSDPT 186

Query: 241 ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAI 295
                       + APE ++ R +    DVWS G++++ ++  G  P+W  T + + +AI
Sbjct: 187 YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI 246

Query: 296 IRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE--NPWIKNDN 345
            +   D+   P         +L+ +    +  +R    +++   +  I+N N
Sbjct: 247 EQ---DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPN 295

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  184 bits (467), Expect = 4e-54
 Identities = 62/293 (21%), Positives = 108/293 (36%), Gaps = 26/293 (8%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
            +   F   +G G FG   +    + G          ++  ++ D  D   E+E++  L 
Sbjct: 9   WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG 68

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK----------------GHYTERA 183
            HPNI+    A E +  +YL +E    G L D +                      + + 
Sbjct: 69  HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 128

Query: 184 AAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE 243
                  + R +    +   +HRDL   N L     EN   K  DFGLS   +   +   
Sbjct: 129 LLHFAADVARGMDYLSQKQFIHRDLAARNILV---GENYVAKIADFGLSRGQEVYVKKTM 185

Query: 244 IVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILL-CGVPPFWAETEEGIAHAIIRGKID 301
                 +MA E L  + Y    DVWS GV+++ ++  G  P+   T   +   + +G   
Sbjct: 186 GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG--- 242

Query: 302 FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE--NPWIKNDNHAPNVSL 352
           +  +       E  +L++      PY R +  ++L   N  ++      N +L
Sbjct: 243 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTTL 295

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  181 bits (459), Expect = 4e-53
 Identities = 54/263 (20%), Positives = 106/263 (40%), Gaps = 15/263 (5%)

Query: 80  LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP 139
               T   +LG G++G  ++    +   T A K + ++     +++++  +E  +M+ + 
Sbjct: 16  RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEI- 70

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIV--NKGHYTERAAAAVGKTILRIVKV 197
           KHPN+V        +   Y++ E    G L D +   N+   +      +   I   ++ 
Sbjct: 71  KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 130

Query: 198 CHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ--FCEIVGSPYYMAPEV 255
             +   +HRDL   N L     EN  +K  DFGLS                   + APE 
Sbjct: 131 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPES 187

Query: 256 LRRN-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
           L  N +  + DVW+ GV+++ +       +   +    + ++      ER       ++ 
Sbjct: 188 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER--PEGCPEKV 245

Query: 315 KELVKNMLDPNPYNRLTLEEVLE 337
            EL++     NP +R +  E+ +
Sbjct: 246 YELMRACWQWNPSDRPSFAEIHQ 268

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (457), Expect = 4e-53
 Identities = 54/263 (20%), Positives = 95/263 (36%), Gaps = 19/263 (7%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           +     + LG G+FG              A K + +      +  D    E  +M+ L +
Sbjct: 13  ETLKLVERLGAGQFGEVWMG-YYNGHTKVAVKSLKQG----SMSPDAFLAEANLMKQL-Q 66

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVC 198
           H  +V        +  IY++ E  E G L D +        T      +   I   +   
Sbjct: 67  HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE--IVGSPYYMAPEVL 256
            E   +HRDL+  N L +D       K  DFGL+   +  E            + APE +
Sbjct: 126 EERNYIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI 182

Query: 257 RRN-YGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
               +  + DVWS G+++  ++  G  P+   T   +   + RG   +         +E 
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG---YRMVRPDNCPEEL 239

Query: 315 KELVKNMLDPNPYNRLTLEEVLE 337
            +L++      P +R T + +  
Sbjct: 240 YQLMRLCWKERPEDRPTFDYLRS 262

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  179 bits (456), Expect = 9e-53
 Identities = 65/275 (23%), Positives = 99/275 (36%), Gaps = 23/275 (8%)

Query: 81  DKYTFGK-ELGRGEFGITHQCFEIETGE--TYACKKIAKEKLKTEIDIDDVRREVEIMRH 137
           D       ELG G FG   Q       +    A K + +   K   D +++ RE +IM  
Sbjct: 8   DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKA--DTEEMMREAQIMHQ 65

Query: 138 LPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVK 196
           L  +P IV      + +  + LVME+  GG L   +V K         A +   +   +K
Sbjct: 66  L-DNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMK 123

Query: 197 VCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE----IVGSPYYMA 252
              E   +HRDL   N L          K  DFGLS      + +            + A
Sbjct: 124 YLEEKNFVHRDLAARNVLL---VNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYA 180

Query: 253 PEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV 310
           PE +  R +    DVWS GV ++  L  G  P+       +   I +GK     +  P+ 
Sbjct: 181 PECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK---RMECPPEC 237

Query: 311 SKEAKELVKNMLDPNPYNRLTLEEV---LENPWIK 342
             E   L+ +       +R     V   +   +  
Sbjct: 238 PPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 272

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  177 bits (450), Expect = 5e-52
 Identities = 58/263 (22%), Positives = 99/263 (37%), Gaps = 14/263 (5%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAK-EKLKTEIDIDDVRREVEIMRHLP 139
           ++   G+ +G G+FG  HQ   +          I   +   ++   +   +E   MR   
Sbjct: 7   ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF- 65

Query: 140 KHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVC 198
            HP+IV       + + ++++MELC  GEL   +  +       +       +   +   
Sbjct: 66  DHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 124

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF--CEIVGSPYYMAPEVL 256
                +HRD+   N L    S N  +K  DFGLS + +    +   +      +MAPE +
Sbjct: 125 ESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 181

Query: 257 R-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
             R +    DVW  GV ++ IL+ GV PF       +   I  G+        P      
Sbjct: 182 NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTL 238

Query: 315 KELVKNMLDPNPYNRLTLEEVLE 337
             L+      +P  R    E+  
Sbjct: 239 YSLMTKCWAYDPSRRPRFTELKA 261

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  178 bits (453), Expect = 1e-51
 Identities = 69/323 (21%), Positives = 127/323 (39%), Gaps = 53/323 (16%)

Query: 66  QLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDI 125
           Q  SV    +   +L +Y   K +G G  GI    ++       A KK+++   + +   
Sbjct: 2   QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHA 60

Query: 126 DDVRREVEIMRHLPKHPNIVTYKEAY------EDKDAIYLVMELCEGGELFDRIVNKGHY 179
               RE+ +M+ +  H NI++    +      E+   +YLVMEL +          +   
Sbjct: 61  KRAYRELVLMKCV-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMEL 116

Query: 180 TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE 239
                + +   +L  +K  H  G++HRDLKP N +      +  LK +DFGL+       
Sbjct: 117 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTAGTSF 173

Query: 240 QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRG 298
                V + YY APEV+    Y   +D+WS G I+  ++     F         + +I  
Sbjct: 174 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233

Query: 299 ----------------------KIDFERDPWPK----------------VSKEAKELVKN 320
                                 +  +    +PK                 + +A++L+  
Sbjct: 234 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSK 293

Query: 321 MLDPNPYNRLTLEEVLENPWIKN 343
           ML  +P  R+++++ L++P+I  
Sbjct: 294 MLVIDPAKRISVDDALQHPYINV 316

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  177 bits (449), Expect = 2e-51
 Identities = 57/285 (20%), Positives = 103/285 (36%), Gaps = 35/285 (12%)

Query: 81  DKYTFGKELGRGEFGITHQC-----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           ++ +FGK LG G FG   +       + +   T A K +      TE +   +  E++++
Sbjct: 23  NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE--ALMSELKVL 80

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH----------------- 178
            +L  H NIV    A        ++ E C  G+L + +  K                   
Sbjct: 81  SYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 140

Query: 179 -YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP 237
                   +    + + +        +HRDL   N L    +     K  DFGL+   K 
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL---THGRITKICDFGLARDIKN 197

Query: 238 GEQFC---EIVGSPYYMAPEVLRRNY-GPEIDVWSAGVIIYILLC-GVPPFWAETEEGIA 292
              +           +MAPE +       E DVWS G+ ++ L   G  P+     +   
Sbjct: 198 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF 257

Query: 293 HAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
           + +I+               E  +++K   D +P  R T +++++
Sbjct: 258 YKMIKEGFRMLSPEH--APAEMYDIMKTCWDADPLKRPTFKQIVQ 300

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  175 bits (445), Expect = 4e-51
 Identities = 54/271 (19%), Positives = 95/271 (35%), Gaps = 21/271 (7%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPK 140
           +      +LG+G FG         T    A K +        +  +   +E ++M+ L +
Sbjct: 17  ESLRLEVKLGQGCFGEVWMGTWNGTTR-VAIKTLKPGT----MSPEAFLQEAQVMKKL-R 70

Query: 141 HPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG--HYTERAAAAVGKTILRIVKVC 198
           H  +V       ++  IY+V E    G L D +  +   +        +   I   +   
Sbjct: 71  HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 129

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE--QFCEIVGSPYYMAPEVL 256
                +HRDL+  N L     EN   K  DFGL+   +  E            + APE  
Sbjct: 130 ERMNYVHRDLRAANILV---GENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAA 186

Query: 257 RRN-YGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA 314
               +  + DVWS G+++  L   G  P+       +   + RG   +     P+  +  
Sbjct: 187 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESL 243

Query: 315 KELVKNMLDPNPYNRLTLEEVLE--NPWIKN 343
            +L+       P  R T E +      +  +
Sbjct: 244 HDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 274

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (441), Expect = 2e-50
 Identities = 58/282 (20%), Positives = 104/282 (36%), Gaps = 30/282 (10%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGE-------TYACKKIAKEKLKTEIDIDDVRREVE 133
           D+   GK LG G FG       I   +         A K +  +   TE D+ D+  E+E
Sbjct: 13  DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEME 70

Query: 134 IMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKG---------------- 177
           +M+ + KH NI+    A      +Y+++E    G L + +  +                 
Sbjct: 71  MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 130

Query: 178 HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP 237
             + +   +    + R ++       +HRDL   N L  + +                  
Sbjct: 131 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 190

Query: 238 GEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAI 295
            ++         +MAPE L  R Y  + DVWS GV+++ I   G  P+     E +   +
Sbjct: 191 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL 250

Query: 296 IRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
             G      D     + E   ++++     P  R T ++++E
Sbjct: 251 KEGH---RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  173 bits (439), Expect = 3e-50
 Identities = 46/276 (16%), Positives = 93/276 (33%), Gaps = 21/276 (7%)

Query: 78  NIL-DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMR 136
           N++   Y  G+ +G G FG+  +   +   +  A K   +       D   +R E    +
Sbjct: 1   NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYK 55

Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVK 196
            L     I       ++     LV++L          +    ++ +  A   K +L  V+
Sbjct: 56  LLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQ 115

Query: 197 VCHENGVMHRDLKPENFLFADG--SENSQLKAIDFGLSIFFKPGE--------QFCEIVG 246
             HE  +++RD+KP+NFL         + +  +DFG+  F++           +   + G
Sbjct: 116 SIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSG 175

Query: 247 SPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD 305
           +  YM+      R      D+ + G +    L G  P+             R     +  
Sbjct: 176 TARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST 235

Query: 306 P----WPKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
           P         +E  + +    +         + +  
Sbjct: 236 PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  171 bits (435), Expect = 1e-49
 Identities = 56/291 (19%), Positives = 101/291 (34%), Gaps = 43/291 (14%)

Query: 81  DKYTFGKELGRGEFGITHQC-----FEIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           +   + +++G G FG   Q         E     A K + +E   +     D +RE  +M
Sbjct: 13  NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALM 70

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHY---------------- 179
                +PNIV           + L+ E    G+L + + +   +                
Sbjct: 71  AEF-DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 129

Query: 180 --------TERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL 231
                   +      + + +   +    E   +HRDL   N L     EN  +K  DFGL
Sbjct: 130 SSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV---GENMVVKIADFGL 186

Query: 232 SIFFKPGEQF---CEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLC-GVPPFWAE 286
           S      + +           +M PE +  N Y  E DVW+ GV+++ +   G+ P++  
Sbjct: 187 SRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 246

Query: 287 TEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
             E + + +  G I            E   L++      P +R +   +  
Sbjct: 247 AHEEVIYYVRDGNI---LACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  168 bits (425), Expect = 6e-48
 Identities = 49/264 (18%), Positives = 94/264 (35%), Gaps = 14/264 (5%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKE--KLKTEIDIDDVRREVEIMRHL 138
            ++   K LG G FG  ++   I  GE        KE  +  +     ++  E  +M  +
Sbjct: 9   TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68

Query: 139 PKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVC 198
             +P++              +   +  G  L     +K +   +        I + +   
Sbjct: 69  -DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL 127

Query: 199 HENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEV 255
            +  ++HRDL   N L         +K  DFGL+      E+            +MA E 
Sbjct: 128 EDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 184

Query: 256 LR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE 313
           +  R Y  + DVWS GV ++ L+  G  P+       I+  + +G+        P  + +
Sbjct: 185 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE---RLPQPPICTID 241

Query: 314 AKELVKNMLDPNPYNRLTLEEVLE 337
              ++      +  +R    E++ 
Sbjct: 242 VYMIMVKCWMIDADSRPKFRELII 265

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  161 bits (409), Expect = 4e-46
 Identities = 57/268 (21%), Positives = 94/268 (35%), Gaps = 20/268 (7%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGE----TYACKKIAKEKLKTEIDIDDVRREVEIMR 136
              T  K +G GEFG  ++     +        A K +      TE    D   E  IM 
Sbjct: 7   SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMG 64

Query: 137 HLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIV 195
               H NI+  +        + ++ E  E G L   +  K G ++      + + I   +
Sbjct: 65  QF-SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGM 123

Query: 196 KVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ----FCEIVGSPYYM 251
           K       +HRDL   N L    + N   K  DFGLS   +   +             + 
Sbjct: 124 KYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT 180

Query: 252 APEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPK 309
           APE +  R +    DVWS G++++ ++  G  P+W  +   +  AI  G   F       
Sbjct: 181 APEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG---FRLPTPMD 237

Query: 310 VSKEAKELVKNMLDPNPYNRLTLEEVLE 337
                 +L+          R    +++ 
Sbjct: 238 CPSAIYQLMMQCWQQERARRPKFADIVS 265

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  161 bits (409), Expect = 9e-46
 Identities = 61/294 (20%), Positives = 117/294 (39%), Gaps = 23/294 (7%)

Query: 57  NVDKKSISFQLRSVVSNPAEGNILDKYTFGKELGRGEFGITHQCFEIE---TGETYACKK 113
           ++D  +++ +L   V +   G       F + +GRG FG  +    ++        A K 
Sbjct: 3   HIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS 62

Query: 114 IAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEA-YEDKDAIYLVMELCEGGELFDR 172
           +   ++    ++     E  IM+    HPN+++        + +  +V+   + G+L + 
Sbjct: 63  L--NRITDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 119

Query: 173 IVNKGH-YTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL 231
           I N+ H  T +     G  + + +K       +HRDL   N +     E   +K  DFGL
Sbjct: 120 IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGL 176

Query: 232 SIFFKPGE-----QFCEIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLC-GVPPFW 284
           +      E               +MA E L+   +  + DVWS GV+++ L+  G PP+ 
Sbjct: 177 ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 236

Query: 285 AETEEGIAHAIIRGKIDFERDPWPK-VSKEAKELVKNMLDPNPYNRLTLEEVLE 337
                 I   +++G+    R   P+       E++     P    R +  E++ 
Sbjct: 237 DVNTFDITVYLLQGR----RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 286

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  160 bits (406), Expect = 2e-45
 Identities = 52/277 (18%), Positives = 106/277 (38%), Gaps = 29/277 (10%)

Query: 81  DKYTFGKELGRGEFGITHQCF-----EIETGETYACKKIAKEKLKTEIDIDDVRREVEIM 135
           +K T  +ELG+G FG+ ++       + E     A K + +    +  +  +   E  +M
Sbjct: 20  EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVM 77

Query: 136 RHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGH----------YTERAAA 185
           +      ++V             ++MEL   G+L   + +              +     
Sbjct: 78  KEF-NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 136

Query: 186 AVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF---C 242
            +   I   +   + N  +HRDL   N +    +E+  +K  DFG++      + +    
Sbjct: 137 QMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTVKIGDFGMTRDIYETDYYRKGG 193

Query: 243 EIVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIY-ILLCGVPPFWAETEEGIAHAIIRGKI 300
           + +    +M+PE L+   +    DVWS GV+++ I      P+   + E +   ++ G +
Sbjct: 194 KGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL 253

Query: 301 DFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
               D          EL++     NP  R +  E++ 
Sbjct: 254 ---LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 287

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  157 bits (398), Expect = 3e-44
 Identities = 57/301 (18%), Positives = 105/301 (34%), Gaps = 53/301 (17%)

Query: 79  ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRH- 137
           I       + +G+G FG   +      GE  A K  +  + +         RE EI +  
Sbjct: 1   IARTIVLQESIGKGRFGEVWRG--KWRGEEVAVKIFSSREER------SWFREAEIYQTV 52

Query: 138 LPKHPNIVTYKEAYEDKDA----IYLVMELCEGGELFDRIVNKGHYTERA-------AAA 186
           + +H NI+ +  A    +     ++LV +  E G LFD +       E         A+ 
Sbjct: 53  MLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASG 112

Query: 187 VGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCE--- 243
           +    + IV    +  + HRDLK +N L     +N      D GL++         +   
Sbjct: 113 LAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTIDIAP 169

Query: 244 --IVGSPYYMAPEVLRRN-------YGPEIDVWSAGVIIYILLCGVPPFWAETE------ 288
              VG+  YMAPEVL  +            D+++ G++ + +           +      
Sbjct: 170 NHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 229

Query: 289 ---------EGIAHAIIRGKIDF---ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVL 336
                    E +   +   K+      R    +  +   ++++     N   RLT   + 
Sbjct: 230 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIK 289

Query: 337 E 337
           +
Sbjct: 290 K 290

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (395), Expect = 5e-44
 Identities = 59/282 (20%), Positives = 107/282 (37%), Gaps = 30/282 (10%)

Query: 81  DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVR---REVEIMRH 137
           D+   GK LGRG FG   +       +T  C+ +A + LK      + R    E++I+ H
Sbjct: 13  DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 72

Query: 138 LPKHPNIVTYKEA-YEDKDAIYLVMELCEGGELFDRIVNKGHY----------------T 180
           +  H N+V    A  +    + +++E C+ G L   + +K +                 T
Sbjct: 73  IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 132

Query: 181 ERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ 240
                     + + ++       +HRDL   N L    SE + +K  DFGL+        
Sbjct: 133 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---SEKNVVKICDFGLARDIYKDPD 189

Query: 241 FCE---IVGSPYYMAPEVLRRN-YGPEIDVWSAGVIIYILLCGV-PPFWAETEEGIAHAI 295
           +           +MAPE +    Y  + DVWS GV+++ +      P+     +      
Sbjct: 190 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 249

Query: 296 IRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE 337
           ++         +   + E  + + +     P  R T  E++E
Sbjct: 250 LKEGTRMRAPDY--TTPEMYQTMLDCWHGEPSQRPTFSELVE 289

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  142 bits (357), Expect = 4e-38
 Identities = 53/333 (15%), Positives = 111/333 (33%), Gaps = 66/333 (19%)

Query: 82  KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHL--- 138
           +Y   ++LG G F       ++      A K +  +K+ TE        E+++++ +   
Sbjct: 14  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE----AAEDEIKLLQRVNDA 69

Query: 139 -------PKHPNIVTYKEAYED--KDAIYLVMELCEGG---ELFDRIVNKGHYTERAAAA 186
                      +I+   + +     + +++VM     G       +              
Sbjct: 70  DNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQ 129

Query: 187 VGKTILRIVK-VCHENGVMHRDLKPENFLF-ADGSENSQLKAIDFGLSIFFKPGEQFCEI 244
           + K +L  +  +    G++H D+KPEN L     S  + ++     L       E +   
Sbjct: 130 ISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNS 189

Query: 245 VGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGI------------ 291
           + +  Y +PEVL    +G   D+WS   +I+ L+ G   F  +                 
Sbjct: 190 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 249

Query: 292 ---------------------AHAIIRGKIDFERDPWPKV-----------SKEAKELVK 319
                                +  ++R     +  P   V           +KE  + + 
Sbjct: 250 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLS 309

Query: 320 NMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSL 352
            ML  +P  R     ++ +PW+K+      + +
Sbjct: 310 PMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRV 342

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

 Score =  101 bits (253), Expect = 4e-26
 Identities = 45/147 (30%), Positives = 87/147 (59%), Gaps = 2/147 (1%)

Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
           + L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGNG
Sbjct: 1   EQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 60

Query: 439 LLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQT 497
            +   EF++ M+  +K   +++ L +AF+ FD++ +G I   EL+ V+         D  
Sbjct: 61  TIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLT-DDE 119

Query: 498 IRDILRDVDLDRDGRISFEEFKAMMTS 524
           + +++R+ D+D DG I++EEF  MM S
Sbjct: 120 VDEMIREADIDGDGHINYEEFVRMMVS 146

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

 Score = 43.3 bits (101), Expect = 1e-05
 Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 8/126 (6%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
             +AF  FDK+  G I   EL  V+      P  +  ++D++ +VD D +G I F EF +
Sbjct: 11  FKEAFALFDKDGDGTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPEFLS 69

Query: 521 MMT-------SGADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVEL 573
           +M        S  +   A + + R     +S    +     L + +  ++  E+ +  ++
Sbjct: 70  LMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADI 129

Query: 574 KKSGQL 579
              G +
Sbjct: 130 DGDGHI 135

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  101 bits (253), Expect = 5e-26
 Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 3/147 (2%)

Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           + NL ++Q+A+ K+ F + D D NG ++  EL   +  +G   S+ +V  LM   DVDGN
Sbjct: 1   SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60

Query: 438 GLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQ 496
             +   EF+  MS  LK   ++  L +AF+ FDKN  G I   ELK VL         D 
Sbjct: 61  HQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLT-DA 119

Query: 497 TIRDILRDVDLDRDGRISFEEFKAMMT 523
            + D+LR+V  D  G I+ ++F A+++
Sbjct: 120 EVDDMLREVS-DGSGEINIQQFAALLS 145

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 98.9 bits (245), Expect = 8e-25
 Identities = 50/148 (33%), Positives = 83/148 (56%), Gaps = 5/148 (3%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L ++ +A+ K  F M D D  GD++ +EL   + M+GQ  +  ++  ++E  D DG+G +
Sbjct: 14  LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73

Query: 441 SCDEFVTMSVH----LKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQ 496
             +EF+ M V       +  +++ L+  FR FDKN  GFI+++EL E+L         + 
Sbjct: 74  DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133

Query: 497 TIRDILRDVDLDRDGRISFEEFKAMMTS 524
            I D+++D D + DGRI F+EF  MM  
Sbjct: 134 -IEDLMKDSDKNNDGRIDFDEFLKMMEG 160

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 182

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 93.2 bits (230), Expect = 1e-22
 Identities = 58/179 (32%), Positives = 109/179 (60%), Gaps = 4/179 (2%)

Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           A+ L ++++  +K++F M+DTD +G +TF+ELKDGL  +G ++ + ++K LM+AAD+D +
Sbjct: 1   AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60

Query: 438 GLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQT 497
           G +   EF+  +VHL ++  ++ L  AF +FDK+ SG+I +DE+++   +          
Sbjct: 61  GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDD---IH 117

Query: 498 IRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMS-ALSIKLFKDKSMEL 555
           I D+++++D D DG+I + EF AMM          R+  R  ++   ++ L  + S ++
Sbjct: 118 IDDMIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMRKTLNLRDALGLVDNGSNQV 176

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.5 bits (226), Expect = 1e-22
 Identities = 36/141 (25%), Positives = 75/141 (53%), Gaps = 2/141 (1%)

Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSC 442
           ++Q  +I++ F + D D  G +  +ELK  +  +G +    ++K ++   D +G G ++ 
Sbjct: 2   EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 61

Query: 443 DEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDI 501
            +F+T M+  +      + + +AF+ FD +++G I    LK V  E       D+ ++++
Sbjct: 62  GDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLT-DEELQEM 120

Query: 502 LRDVDLDRDGRISFEEFKAMM 522
           + + D D DG +S +EF  +M
Sbjct: 121 IDEADRDGDGEVSEQEFLRIM 141

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (100), Expect = 1e-05
 Identities = 18/101 (17%), Positives = 38/101 (37%)

Query: 424 DVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKE 483
           +++   +  D DG G +   E       L      + + +     DK  +G +   +   
Sbjct: 7   EIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLT 66

Query: 484 VLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           V+ +  +  +  + I    +  D D  G+ISF+  K +   
Sbjct: 67  VMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKE 107

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 90.4 bits (223), Expect = 7e-22
 Identities = 44/154 (28%), Positives = 83/154 (53%), Gaps = 6/154 (3%)

Query: 375 RVVADNLPQDQMAQIKQMFYMMDTD-KNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAAD 433
           +   + L ++Q  + K  F +     ++G ++ +EL   + M+GQ  +  +++ +++  D
Sbjct: 2   KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 61

Query: 434 VDGNGLLSCDEFVTMSVHLKRI----GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDN 489
            DG+G +  DEF+ M V   +      +++ LS  FR FDKN  G+I+++ELK +L    
Sbjct: 62  EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG 121

Query: 490 AGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT 523
                D  I ++++D D + DGRI ++EF   M 
Sbjct: 122 ETITEDD-IEELMKDGDKNNDGRIDYDEFLEFMK 154

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 90.3 bits (223), Expect = 1e-21
 Identities = 33/171 (19%), Positives = 69/171 (40%), Gaps = 16/171 (9%)

Query: 368 KFKKKVLRVVAD--NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVS-DPD 424
           K + +V++ + +  +  + ++ +  + F  +    +G L+ EE K               
Sbjct: 3   KLRPEVMQDLLESTDFTEHEIQEWYKGF--LRDCPSGHLSMEEFKKIYGNFFPYGDASKF 60

Query: 425 VKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEV 484
            + +    D +G+G +   EF+       R   +  L  AF  +D + +G+I   E+ E+
Sbjct: 61  AEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEI 120

Query: 485 LLEDNAGPNG-----------DQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           +       +            ++    I R +D +RDG++S EEF     S
Sbjct: 121 VQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKS 171

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 46.7 bits (110), Expect = 1e-06
 Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 14/130 (10%)

Query: 371 KKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLME 430
           KK+           + A+   +F   D + +G + F E    L++  +   +  +K    
Sbjct: 45  KKIYGNFFPYGDASKFAE--HVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFS 102

Query: 431 AADVDGNGLLSCDEF------------VTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEV 478
             D+DGNG +S  E               M +       +    + FR  D N+ G + +
Sbjct: 103 MYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSL 162

Query: 479 DELKEVLLED 488
           +E       D
Sbjct: 163 EEFIRGAKSD 172

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 86.4 bits (213), Expect = 4e-20
 Identities = 29/162 (17%), Positives = 63/162 (38%), Gaps = 17/162 (10%)

Query: 380 NLPQDQMAQIKQMFYMMDTD-KNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
            +     AQ+++ +     +  +G L   E K    +   + +   V+ +  A D +G+ 
Sbjct: 14  AVGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDN 73

Query: 439 LLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVL------------- 485
            +   E+V     + R   +  L   F+ +DK+++G I+  EL +++             
Sbjct: 74  TIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVE 133

Query: 486 ---LEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
               +       ++ +  I   VD + DG++S  EF      
Sbjct: 134 VEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARR 175

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 43.7 bits (102), Expect = 2e-05
 Identities = 24/135 (17%), Positives = 51/135 (37%), Gaps = 20/135 (14%)

Query: 371 KKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLME 430
           K+  +V  +         ++ MF   DT+ +  + F E    LN++ +   +  +K   +
Sbjct: 45  KRFFKVPDNEEATQY---VEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFK 101

Query: 431 AADVDGNGLLSCDEFVTM-----------------SVHLKRIGNDDILSQAFRFFDKNQS 473
             D D NG +   E + +                     K +  ++++ + F   D+N  
Sbjct: 102 IYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGD 161

Query: 474 GFIEVDELKEVLLED 488
           G + ++E  E    D
Sbjct: 162 GQLSLNEFVEGARRD 176

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.0 bits (212), Expect = 5e-20
 Identities = 26/171 (15%), Positives = 61/171 (35%), Gaps = 16/171 (9%)

Query: 368 KFKKKVLRVVAD--NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSD-PD 424
           K K +V+  +       + ++ Q  + F  +    +G L     +               
Sbjct: 4   KLKPEVVEELTRKTYFTEKEVQQWYKGF--IKDCPSGQLDAAGFQKIYKQFFPFGDPTKF 61

Query: 425 VKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEV 484
              +    D + +G +   EF+       R   D+ L  AF+ +D +  G+I  +E+ ++
Sbjct: 62  ATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDI 121

Query: 485 LLEDNAGPNGD-----------QTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           +                     + +  I   +D + DG+++ +EF+    +
Sbjct: 122 VDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKA 172

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (111), Expect = 1e-06
 Identities = 22/119 (18%), Positives = 47/119 (39%), Gaps = 12/119 (10%)

Query: 382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLS 441
             D       +F + D +K+G + F E    L++  +   D  ++   +  D+D +G ++
Sbjct: 55  FGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYIT 114

Query: 442 CDEF------------VTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLED 488
            +E              T+ +  +    +  + + F   DKN  G + + E +E    D
Sbjct: 115 RNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKAD 173

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 80.8 bits (199), Expect = 3e-19
 Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 6/107 (5%)

Query: 420 VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVD 479
           + D DV   + A     +      EF    V L     DD+  +AF   D+++SGFIE D
Sbjct: 5   LKDADVAAALAACSAADS--FKHKEFFAK-VGLASKSLDDVK-KAFYVIDQDKSGFIEED 60

Query: 480 ELKEVL--LEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           ELK  L     +A    D   +  L D D D DG I  +EF AM+ +
Sbjct: 61  ELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIKA 107

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 55.0 bits (132), Expect = 5e-10
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDG---LNMIGQKVSDPDVKMLMEAADVDGN 437
           L    +  +K+ FY++D DK+G +  +ELK      +   + ++D + K  +   D DG+
Sbjct: 34  LASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGD 93

Query: 438 GLLSCDEFVTM 448
           G++  DEF  M
Sbjct: 94  GMIGVDEFAAM 104

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 81.1 bits (200), Expect = 3e-19
 Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 6/107 (5%)

Query: 420 VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVD 479
           +   D+K  ++A  V   G  +  +F  +        + + + + F+  D + SGFIE +
Sbjct: 6   LKADDIKKALDA--VKAEGSFNHKKFFALVGLKAM--SANDVKKVFKAIDADASGFIEEE 61

Query: 480 ELKEVL--LEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           ELK VL     +     D   +  L+  D D DG+I  +EF+ ++  
Sbjct: 62  ELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE 108

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 57.6 bits (139), Expect = 6e-11
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 3/72 (4%)

Query: 380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGL---NMIGQKVSDPDVKMLMEAADVDG 436
            L       +K++F  +D D +G +  EELK  L      G+ ++D + K  ++AAD DG
Sbjct: 34  GLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDG 93

Query: 437 NGLLSCDEFVTM 448
           +G +  DEF T+
Sbjct: 94  DGKIGIDEFETL 105

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 78.8 bits (194), Expect = 2e-18
 Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 6/111 (5%)

Query: 416 IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGF 475
           I   +S  D+   ++  +          +F      L ++     +   FRF D +QSG+
Sbjct: 2   ITDILSAEDIAAALQ--ECQDPDTFEPQKFFQT-SGLSKMSASQ-VKDIFRFIDNDQSGY 57

Query: 476 IEVDELKEVL--LEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           ++ DELK  L   + +A    +   + ++   D D DG+I  +EF+ M+ S
Sbjct: 58  LDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVHS 108

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 56.9 bits (137), Expect = 9e-11
 Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 3/71 (4%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI---GQKVSDPDVKMLMEAADVDGN 437
           L +   +Q+K +F  +D D++G L  +ELK  L       +++++ + K LM+AAD DG+
Sbjct: 35  LSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGD 94

Query: 438 GLLSCDEFVTM 448
           G +  DEF  M
Sbjct: 95  GKIGADEFQEM 105

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 80.6 bits (198), Expect = 3e-18
 Identities = 41/209 (19%), Positives = 67/209 (32%), Gaps = 35/209 (16%)

Query: 83  YTFGKELGRGEFGITHQCFEIETGETYACK-----KIAKEKLKTEIDIDDVR-------- 129
              GK +G G+      C+  E       K       + +K+K + D  D+         
Sbjct: 2   DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRS 60

Query: 130 --REVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAV 187
              E   ++ L +   +        +     ++MEL +                     V
Sbjct: 61  ARNEFRALQKL-QGLAVPKVYAWEGN----AVLMELIDAK-------ELYRVRVENPDEV 108

Query: 188 GKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQFCEIVGS 247
              IL  V   +  G++H DL   N L ++      +  IDF  S+     E + EI+  
Sbjct: 109 LDMILEEVAKFYHRGIVHGDLSQYNVLVSE----EGIWIIDFPQSVEVGE-EGWREILER 163

Query: 248 PYYMAPEVLRRNYGPEIDVWSAGVIIYIL 276
                     R Y  E D+ S   I  IL
Sbjct: 164 DVRNIITYFSRTYRTEKDINS--AIDRIL 190

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

 Score = 79.8 bits (196), Expect = 6e-18
 Identities = 34/162 (20%), Positives = 62/162 (38%), Gaps = 24/162 (14%)

Query: 377 VADNLPQDQMA-------QIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV--------S 421
           +  NLP +++          K +F  +  D + +++ +EL+  LN I  K         S
Sbjct: 3   IQANLPDEKVLSEEEIDDNFKTLFSKLAGD-DMEISVKELQTILNRIISKHKDLRTNGFS 61

Query: 422 DPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDEL 481
               + ++   D DGNG L   EF  +                FR FD ++SG +   E+
Sbjct: 62  LESCRSMVNLMDRDGNGKLGLVEFNILWNR------IRNYLTIFRKFDLDKSGSMSAYEM 115

Query: 482 KEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT 523
           +  +    AG      +  ++     D +  I F+ F   + 
Sbjct: 116 RMAIEA--AGFKLPCQLHQVIVARFADDELIIDFDNFVRCLV 155

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

 Score = 63.6 bits (154), Expect = 3e-12
 Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLS 441
             +++     +F   D DK+G ++  E++  +   G K+     ++++     D   ++ 
Sbjct: 88  LWNRIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVA-RFADDELIID 146

Query: 442 CDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDE 480
            D FV   V L+       L + F+  D   +G I++D 
Sbjct: 147 FDNFVRCLVRLEI------LFKIFKQLDPENTGTIQLDL 179

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

 Score = 45.1 bits (106), Expect = 6e-06
 Identities = 17/117 (14%), Positives = 42/117 (35%), Gaps = 10/117 (8%)

Query: 458 DDILSQAFRFFDKNQSGFIEVDELKEVL-------LEDNAGPNGDQTIRDILRDVDLDRD 510
           DD     F          I V EL+ +L        +        ++ R ++  +D D +
Sbjct: 19  DDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGN 77

Query: 511 GRISFEEFKAMMTSGADWKMASRQYSRAMMSALSIKLFKD--KSMELTKSMELNKSM 565
           G++   EF  +     ++    R++      ++S    +   ++       +L++ +
Sbjct: 78  GKLGLVEFNILWNRIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVI 134

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

 Score = 77.3 bits (190), Expect = 7e-18
 Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 6/110 (5%)

Query: 416 IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGF 475
           + + +   D+   + A      G      F  +     +   D  + + F   DK+QSGF
Sbjct: 2   MTKVLKADDINKAISA--FKDPGTFDYKRFFHLVGLKGK--TDAQVKEVFEILDKDQSGF 57

Query: 476 IEVDELKEVL--LEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT 523
           IE +ELK VL     +     D   + +L   D D DG+I  +EF  M+ 
Sbjct: 58  IEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVA 107

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

 Score = 56.1 bits (135), Expect = 2e-10
 Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKD---GLNMIGQKVSDPDVKMLMEAADVDGN 437
           L     AQ+K++F ++D D++G +  EELK    G +  G+ ++D + K L+ A D D +
Sbjct: 35  LKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHD 94

Query: 438 GLLSCDEFVTM 448
           G +  DEF  M
Sbjct: 95  GKIGADEFAKM 105

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 78.7 bits (193), Expect = 2e-17
 Identities = 35/171 (20%), Positives = 64/171 (37%), Gaps = 16/171 (9%)

Query: 368 KFKKKVLRVVAD--NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVS-DPD 424
           K  K  L  +       + ++ Q  + F  +    +G L  E+            S +  
Sbjct: 7   KLSKDDLTCLKQSTYFDRREIQQWHKGF--LRDCPSGQLAREDFVKIYKQFFPFGSPEDF 64

Query: 425 VKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEV 484
              L    D D NG +  +EF+T+     R   ++ LS AF  +D N  G+I  DE+  +
Sbjct: 65  ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTI 124

Query: 485 LLEDNAGPNG-----------DQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           +                    +  ++ I + +D + DG I+ +EF+     
Sbjct: 125 VASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 54.1 bits (129), Expect = 4e-09
 Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 12/112 (10%)

Query: 389 IKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
              +F + D D NG + FEE    L+   +   +  +    E  D++ +G ++ DE +T+
Sbjct: 65  ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTI 124

Query: 449 SVHLKRIGN------------DDILSQAFRFFDKNQSGFIEVDELKEVLLED 488
              + ++              +  + + F+  DKN+ G+I +DE +E    D
Sbjct: 125 VASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVD 176

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 183

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 78.1 bits (191), Expect = 2e-17
 Identities = 35/166 (21%), Positives = 68/166 (40%), Gaps = 12/166 (7%)

Query: 383 QDQMAQIKQMFYMMDTDKNGD--LTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
             ++  + ++F  + +    D  +  EE +  L    +K        + +  D   NG+L
Sbjct: 13  VSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGIL 71

Query: 441 SCDEFVTMS-VHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNG----- 494
             +EF     V       DD +  +F+ +D  Q GFIE  E+K++++   A         
Sbjct: 72  GFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDT 131

Query: 495 --DQTIRDILRDVDLDRDGRISFEEFKAMMTSGAD-WKMASRQYSR 537
             +  I     + D   DG+I  EE+++++       K  + QY +
Sbjct: 132 VIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTLQYLK 177

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.5 bits (187), Expect = 3e-17
 Identities = 26/139 (18%), Positives = 53/139 (38%), Gaps = 7/139 (5%)

Query: 389 IKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
            K+ F + D   +G + + +  D +  +GQ  ++ +V  ++     D       D    +
Sbjct: 2   FKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFL 61

Query: 449 SVHLKRI-----GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILR 503
            +          G  +   + FR FDK  +G +   EL+ V      G    +   + + 
Sbjct: 62  PMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHV--LTTLGEKMTEEEVETVL 119

Query: 504 DVDLDRDGRISFEEFKAMM 522
               D +G I++E F   +
Sbjct: 120 AGHEDSNGCINYEAFLKHI 138

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (123), Expect = 1e-08
 Identities = 25/132 (18%), Positives = 54/132 (40%), Gaps = 4/132 (3%)

Query: 320 NMLDPNPYNRLTLEE---VLENPWIKNDNHAPNVSLGGNVTSRIKQFSIMNKFKKKVLRV 376
            + D     ++   +   V+        N      LG   +  +K   +  +    +L+ 
Sbjct: 7   ELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQA 66

Query: 377 VADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDG 436
           VA N  Q       + F + D + NG +   EL+  L  +G+K+++ +V+ ++     D 
Sbjct: 67  VAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLA-GHEDS 125

Query: 437 NGLLSCDEFVTM 448
           NG ++ + F+  
Sbjct: 126 NGCINYEAFLKH 137

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 75.0 bits (184), Expect = 4e-17
 Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 6/111 (5%)

Query: 416 IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGF 475
           +   +S  D+K  + A            +F  M V LK+   DD + + F   DK++SGF
Sbjct: 2   MTDLLSAEDIKKAIGA--FTAADSFDHKKFFQM-VGLKKKSADD-VKKVFHILDKDKSGF 57

Query: 476 IEVDELKEVL--LEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           IE DEL  +L     +A     +  + ++   D D DG+I  EEF  ++  
Sbjct: 58  IEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE 108

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 55.4 bits (133), Expect = 4e-10
 Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 4/96 (4%)

Query: 356 VTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNM 415
           +   I  F+  + F  K        L +     +K++F+++D DK+G +  +EL   L  
Sbjct: 11  IKKAIGAFTAADSFDHKKF-FQMVGLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKG 69

Query: 416 IG---QKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
                + +S  + K LM A D DG+G +  +EF T+
Sbjct: 70  FSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTL 105

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 73.8 bits (181), Expect = 6e-17
 Identities = 30/77 (38%), Positives = 56/77 (72%)

Query: 375 RVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADV 434
           + +A+ L ++++  +K++F M+DTD +G +TF+ELKDGL  +G ++ + ++K LM+AAD+
Sbjct: 11  KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70

Query: 435 DGNGLLSCDEFVTMSVH 451
           D +G +   EF+  +VH
Sbjct: 71  DKSGTIDYGEFIAATVH 87

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 58.8 bits (142), Expect = 1e-11
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
           L + F+  D + SG I  DELK+ L    +    +  I+D++   D+D+ G I + EF A
Sbjct: 25  LKELFKMIDTDNSGTITFDELKDGLKRVGSELM-ESEIKDLMDAADIDKSGTIDYGEFIA 83

Query: 521 MMT 523
              
Sbjct: 84  ATV 86

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 74.8 bits (183), Expect = 3e-16
 Identities = 27/155 (17%), Positives = 55/155 (35%), Gaps = 14/155 (9%)

Query: 380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVS-DPDVKMLMEAADVDGNG 438
           N  + ++  + + F   +   +G +  E  K                  L  A D    G
Sbjct: 9   NFTKRELQVLYRGF--KNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTG 66

Query: 439 LLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVL-----------LE 487
            +  ++FVT    L R    + L   F  +D N+ G+I  +E+ +++             
Sbjct: 67  SVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYP 126

Query: 488 DNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM 522
                   Q +    + +D ++DG ++ +EF    
Sbjct: 127 VLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESC 161

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 49.0 bits (116), Expect = 2e-07
 Identities = 20/112 (17%), Positives = 45/112 (40%), Gaps = 12/112 (10%)

Query: 389 IKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
              +F   DT + G + FE+    L+++ +      ++      D++ +G ++ +E + +
Sbjct: 53  AHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDI 112

Query: 449 SVHLKRIGN------------DDILSQAFRFFDKNQSGFIEVDELKEVLLED 488
              +  +                 +   F+  DKN+ G + +DE  E   ED
Sbjct: 113 VKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQED 164

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.9 bits (181), Expect = 5e-16
 Identities = 27/135 (20%), Positives = 56/135 (41%), Gaps = 14/135 (10%)

Query: 393 FYMMDTDKNGDLTFEELKDGLNMIGQKV-----SDPDVKMLMEAADVDGNGLLSCDEFVT 447
           ++     ++G++  EEL+  L   G        S    ++++   D D  G +  + F  
Sbjct: 5   YFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKE 64

Query: 448 MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDL 507
           +   L     +      F   D++ SG +E  EL++  +         QT+  I++    
Sbjct: 65  LWAALNAWKEN------FMTVDQDGSGTVEHHELRQA-IGLMGYRLSPQTLTTIVKRY-- 115

Query: 508 DRDGRISFEEFKAMM 522
            ++GRI F+++ A  
Sbjct: 116 SKNGRIFFDDYVACC 130

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.2 bits (156), Expect = 1e-12
 Identities = 20/98 (20%), Positives = 41/98 (41%), Gaps = 8/98 (8%)

Query: 382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLS 441
               +   K+ F  +D D +G +   EL+  + ++G ++S   +  +++    +G   + 
Sbjct: 65  LWAALNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKNGR--IF 122

Query: 442 CDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVD 479
            D++V   V L+       L+  FR  D  Q G     
Sbjct: 123 FDDYVACCVKLRA------LTDFFRKRDHLQQGSANFI 154

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.2 bits (148), Expect = 1e-11
 Identities = 25/158 (15%), Positives = 49/158 (31%), Gaps = 19/158 (12%)

Query: 371 KKVLRVVADNLPQD--QMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKML 428
           ++ L     N       +   + M  M+D D  G + F              +    K  
Sbjct: 22  QRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNA------FKELWAALNAWKEN 75

Query: 429 MEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLED 488
               D DG+G +   E       +    +   L+   + + KN  G I  D+     ++ 
Sbjct: 76  FMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSKN--GRIFFDDYVACCVK- 132

Query: 489 NAGPNGDQTIRDILRDVDLDRDGRI--SFEEFKAMMTS 524
                  + + D  R  D  + G     +++F     +
Sbjct: 133 ------LRALTDFFRKRDHLQQGSANFIYDDFLQGTMA 164

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (124), Expect = 2e-08
 Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 6/79 (7%)

Query: 465 FRFFDK--NQSGFIEVDELKEVL----LEDNAGPNGDQTIRDILRDVDLDRDGRISFEEF 518
           + +F     Q G ++ +EL+  L    +     P   +T R ++  +D D  G++ F  F
Sbjct: 3   YTYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAF 62

Query: 519 KAMMTSGADWKMASRQYSR 537
           K +  +   WK       +
Sbjct: 63  KELWAALNAWKENFMTVDQ 81

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

 Score = 74.0 bits (181), Expect = 7e-16
 Identities = 28/161 (17%), Positives = 65/161 (40%), Gaps = 17/161 (10%)

Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQK--------VSDPDVKMLMEAADV 434
           +D     +++F  +   ++ +++  EL+  L  +  K         S    K++++  D 
Sbjct: 14  EDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDE 72

Query: 435 DGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNG 494
           DG+G L   EF  +   +++        + +R  D ++SG +   E+++ L  + AG   
Sbjct: 73  DGSGKLGLKEFYILWTKIQKY------QKIYREIDVDRSGTMNSYEMRKAL--EEAGFKL 124

Query: 495 DQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQY 535
              +  ++     D +  I F+ F   +          +Q 
Sbjct: 125 PCQLHQVIVARFADDELIIDFDNFVRCLVRLEILFKIFKQL 165

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

 Score = 55.6 bits (133), Expect = 1e-09
 Identities = 20/98 (20%), Positives = 45/98 (45%), Gaps = 7/98 (7%)

Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSC 442
             ++ + ++++  +D D++G +   E++  L   G K+    +  ++ A   D   ++  
Sbjct: 87  WTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQ-LHQVIVARFADDELIIDF 145

Query: 443 DEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDE 480
           D FV   V L+       L + F+  D   +G I++D 
Sbjct: 146 DNFVRCLVRLEI------LFKIFKQLDPENTGTIQLDL 177

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

 Score = 73.6 bits (179), Expect = 7e-16
 Identities = 25/156 (16%), Positives = 43/156 (27%), Gaps = 19/156 (12%)

Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDP-----------DVKMLMEA 431
              + ++K  F  +D DK+G +T  + +       ++                       
Sbjct: 2   DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFL 61

Query: 432 ADVDGNGLLSCDEFVTMSVHLKRIGNDD-----ILSQAFRFFDKNQSGFIEVDELKEVLL 486
             V G   +    F+     + +           L   FR  D N+   I  DE      
Sbjct: 62  TAVAGGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF- 120

Query: 487 EDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM 522
                             +D + DG +S EEF    
Sbjct: 121 --GMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAG 154

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

 Score = 38.1 bits (87), Expect = 0.001
 Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLS 441
                  +   F  +DT+++ +++ +E      M+   +         +A D + +GLLS
Sbjct: 89  KSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML--GLDKTMAPASFDAIDTNNDGLLS 146

Query: 442 CDEFVTM 448
            +EFV  
Sbjct: 147 LEEFVIA 153

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 142

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 72.0 bits (175), Expect = 1e-15
 Identities = 30/147 (20%), Positives = 72/147 (48%), Gaps = 5/147 (3%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           LPQ Q+ ++K+ F M+D D++G ++ E++K     +G+   D ++  +++        L 
Sbjct: 1   LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLKE---APGPLN 57

Query: 441 SCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRD 500
                   S  L    +++ +  AF  FD+ ++  + ++ +K++L       N D+ +R 
Sbjct: 58  FTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDE-MRM 116

Query: 501 ILRDVDLDRDGRISFEEFKAMMTSGAD 527
             ++  ++  G+  + +F AM+    +
Sbjct: 117 TFKEAPVE-GGKFDYVKFTAMIKGSGE 142

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 152

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 72.0 bits (175), Expect = 1e-15
 Identities = 32/150 (21%), Positives = 62/150 (41%), Gaps = 6/150 (4%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGD--LTFEELKDGLNMIGQKVSDPDVKMLM-EAADVDGN 437
           L QD++  +K +F + D     D  +   +L D    +G    + DV  +       + +
Sbjct: 1   LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 60

Query: 438 GLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQT 497
                       +     G      +AF+ FD+   GFI   EL+ VL       + D+ 
Sbjct: 61  LPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLS-DED 119

Query: 498 IRDILR--DVDLDRDGRISFEEFKAMMTSG 525
           + +I++  D+  D +G + +E+F   + +G
Sbjct: 120 VDEIIKLTDLQEDLEGNVKYEDFVKKVMAG 149

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 72.8 bits (177), Expect = 2e-15
 Identities = 28/162 (17%), Positives = 51/162 (31%), Gaps = 26/162 (16%)

Query: 385 QMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV---------------SDPDVKMLM 429
              ++K+ F   D D NG L   + +     I +                        L 
Sbjct: 5   ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLA 64

Query: 430 EAADVDGNGLLSCDEFVTMSVHLKRIGN--------DDILSQAFRFFDKNQSGFIEVDEL 481
           + A V  +G L+ ++F+ ++ +L               ++       DKN  G I  DE 
Sbjct: 65  KEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEF 124

Query: 482 KEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT 523
              L              +    VD + +G +S +E    + 
Sbjct: 125 AAWLTALG---MSKAEAAEAFNQVDTNGNGELSLDELLTAVR 163

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 46.2 bits (108), Expect = 2e-06
 Identities = 19/151 (12%), Positives = 46/151 (30%), Gaps = 11/151 (7%)

Query: 298 GKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGNVT 357
           G ++           + ++  +++ +    +    E                   G    
Sbjct: 22  GALERA---------DFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSD 72

Query: 358 SRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIG 417
             + +   +   +  +      +  +     +K +  M D + +G +  +E    L  +G
Sbjct: 73  GSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG 132

Query: 418 QKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
                 +        D +GNG LS DE +T 
Sbjct: 133 MS--KAEAAEAFNQVDTNGNGELSLDELLTA 161

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 41.6 bits (96), Expect = 6e-05
 Identities = 10/115 (8%), Positives = 36/115 (31%), Gaps = 16/115 (13%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVL--------------LEDNAGPNGDQTIRDILRDVD 506
           L + F  +D + +G +E  + ++                               + ++  
Sbjct: 9   LKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAG 68

Query: 507 LDRDGRISFEEFKAMMTS--GADWKMASRQYSRAMMSALSIKLFKDKSMELTKSM 559
           +  DG ++ E+F  +  +      + +  +    ++  +     K+   ++    
Sbjct: 69  VGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADE 123

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.3 bits (174), Expect = 4e-15
 Identities = 31/184 (16%), Positives = 69/184 (37%), Gaps = 17/184 (9%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV-----SDPDVKMLMEAADVD 435
            P      +   F  +   ++G +  +EL+  L   G        +    ++++   D D
Sbjct: 1   FPGQTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRD 59

Query: 436 GNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGD 495
            +G +  +EF  +          +   Q F  FD ++SG ++  EL++ L       +  
Sbjct: 60  MSGTMGFNEFKELWAV------LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLS-P 112

Query: 496 QTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSALSIKLFKDKSMEL 555
           Q +  I +      +G+I+F+++ A          + R+   A      +    D  ++ 
Sbjct: 113 QAVNSIAKRY--STNGKITFDDYIACCVKLRALTDSFRRRDTAQQG--VVNFPYDDFIQC 168

Query: 556 TKSM 559
             S+
Sbjct: 169 VMSV 172

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 67.6 bits (165), Expect = 5e-15
 Identities = 18/65 (27%), Positives = 35/65 (53%)

Query: 458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEE 517
           ++ + +AF+ FD N  G I+ DE K ++ +    P  D  + + +++ D D +G I   E
Sbjct: 1   EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPE 60

Query: 518 FKAMM 522
           F  ++
Sbjct: 61  FMDLI 65

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 59.1 bits (143), Expect = 6e-12
 Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 1/62 (1%)

Query: 388 QIKQMFYMMDTDKNGDLTFEELKDGLNMIGQK-VSDPDVKMLMEAADVDGNGLLSCDEFV 446
           +I + F + D + +G + F+E K  +  +G++ ++D +V+  M+ AD DGNG++   EF+
Sbjct: 3   EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 62

Query: 447 TM 448
            +
Sbjct: 63  DL 64

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 34.8 bits (80), Expect = 0.002
 Identities = 13/63 (20%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 424 DVKMLMEAADVDGNGLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELK 482
           ++    +  D +G+G++  DEF   M    +    D  + +A +  D++ +G I++ E  
Sbjct: 3   EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 62

Query: 483 EVL 485
           +++
Sbjct: 63  DLI 65

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.2 bits (171), Expect = 1e-14
 Identities = 32/182 (17%), Positives = 66/182 (36%), Gaps = 25/182 (13%)

Query: 380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEEL----KDGLNMIGQKVSDPDVKMLMEAADVD 435
            L + ++    + F  +   +   +          + +  + +  ++P  + +       
Sbjct: 10  FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTS 69

Query: 436 -GNGLLSCDEFVT-MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN 493
                LS ++F+  +SV       D     AFR FD +  G +  ++L  ++        
Sbjct: 70  PAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGE 129

Query: 494 G--------DQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSALSI 545
                     Q I +IL + D+DRDG I+  EF+ +++   D             S+  I
Sbjct: 130 DTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPD-----------FASSFKI 178

Query: 546 KL 547
            L
Sbjct: 179 VL 180

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

 Score = 70.4 bits (171), Expect = 1e-14
 Identities = 27/161 (16%), Positives = 51/161 (31%), Gaps = 22/161 (13%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEEL-----KDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
             + + K MF  +D + NG ++ +E+        +N +G              A   G G
Sbjct: 9   RWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAG 68

Query: 439 L-----LSCDEFVTMSVHL-----------KRIGNDDILSQAFRFFDKNQSGFIEVDELK 482
           +          ++     L           +           F   DK+Q+G I +DE K
Sbjct: 69  MKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWK 128

Query: 483 EVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT 523
                     + +    +  R  D+D  G++  +E      
Sbjct: 129 AYTKAAGIIQSSED-CEETFRVCDIDESGQLDVDEMTRQHL 168

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

 Score = 46.5 bits (109), Expect = 2e-06
 Identities = 33/160 (20%), Positives = 51/160 (31%), Gaps = 20/160 (12%)

Query: 308 PKVSKEAKELVKNMLDPNPYNRLTLEEVL---------------ENPWIKNDNHAPNVSL 352
           P+     K +  N LD N   +++L+E++               E      D        
Sbjct: 8   PRWIGRHKHMF-NFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGG 66

Query: 353 GGNVTSRIKQFS----IMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEE 408
            G        +        K     L   A N P         +F ++D D+NG +T +E
Sbjct: 67  AGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDE 126

Query: 409 LKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
            K      G   S  D +      D+D +G L  DE    
Sbjct: 127 WKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQ 166

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 140

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 68.9 bits (167), Expect = 1e-14
 Identities = 27/140 (19%), Positives = 58/140 (41%), Gaps = 3/140 (2%)

Query: 385 QMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDE 444
             +  KQ F + D    G +    + D L   GQ  +  ++  +      + +       
Sbjct: 3   DDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFLQV 62

Query: 445 FVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRD 504
               +      G+ +   + F+ FDK+ +G I V EL+ VL         ++ + ++L+ 
Sbjct: 63  LNRPNGF-DMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGE-KLSNEEMDELLKG 120

Query: 505 VDLDRDGRISFEEFKAMMTS 524
           V +  DG +++ +F  M+ +
Sbjct: 121 VPVK-DGMVNYHDFVQMILA 139

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.0 bits (158), Expect = 5e-14
 Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 1/77 (1%)

Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
           + NL ++Q+A+ K+ F + D D NG ++  EL   +  +G   S+ +V  LM   DVDGN
Sbjct: 1   SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGN 60

Query: 438 GLLSCDEFVT-MSVHLK 453
             +   EF+  MS  LK
Sbjct: 61  HQIEFSEFLALMSRQLK 77

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.0 bits (132), Expect = 2e-10
 Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
             +AF  FDK+ +G I   EL  V+      P+ +  + D++ ++D+D + +I F EF A
Sbjct: 12  FKEAFALFDKDNNGSISSSELATVMRSLGLSPS-EAEVNDLMNEIDVDGNHQIEFSEFLA 70

Query: 521 MMT 523
           +M+
Sbjct: 71  LMS 73

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

 Score = 65.4 bits (159), Expect = 5e-14
 Identities = 18/77 (23%), Positives = 42/77 (54%), Gaps = 1/77 (1%)

Query: 373 VLRVVADNLPQDQMAQIKQMFYMMDTD-KNGDLTFEELKDGLNMIGQKVSDPDVKMLMEA 431
           + +   + L ++Q  + K  F +     ++G ++ +EL   + M+GQ  +  +++ +++ 
Sbjct: 1   IYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDE 60

Query: 432 ADVDGNGLLSCDEFVTM 448
            D DG+G +  DEF+ M
Sbjct: 61  VDEDGSGTVDFDEFLVM 77

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

 Score = 53.1 bits (127), Expect = 1e-09
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 461 LSQAFRFFDKN-QSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFK 519
              AF  F    + G I   EL +V+      P   + +++++ +VD D  G + F+EF 
Sbjct: 17  FKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPT-PEELQEMIDEVDEDGSGTVDFDEFL 75

Query: 520 AMMT 523
            MM 
Sbjct: 76  VMMV 79

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 68.1 bits (165), Expect = 7e-14
 Identities = 20/167 (11%), Positives = 54/167 (32%), Gaps = 28/167 (16%)

Query: 381 LPQDQMAQIKQMF-YMMDTDKNGDLTFEELKDGLNMIG---------------QKVSDPD 424
           L   Q  +IK  F + +D + +G +   + +D +                   Q   + +
Sbjct: 2   LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61

Query: 425 VKMLMEAADVDGNGLLSCDEFVTMSVHLK---------RIGNDDILSQAFRFFDKNQSGF 475
            + L   AD++ + ++S +E++ M                   + +   F+  D +  G 
Sbjct: 62  WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121

Query: 476 IEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM 522
           ++++E +               +  +   +            +K + 
Sbjct: 122 VDLEEFQNYCKNFQLQ---CADVPAVYNVITDGGKVTFDLNRYKELY 165

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 40.0 bits (92), Expect = 2e-04
 Identities = 12/70 (17%), Positives = 24/70 (34%), Gaps = 2/70 (2%)

Query: 379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNG 438
            +LP     +I  +F  MD   +G +  EE ++        +   DV  +       G  
Sbjct: 97  ADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCADVPAVYNVITDGGKV 154

Query: 439 LLSCDEFVTM 448
               + +  +
Sbjct: 155 TFDLNRYKEL 164

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 39.2 bits (90), Expect = 5e-04
 Identities = 14/120 (11%), Positives = 36/120 (30%), Gaps = 13/120 (10%)

Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQ---------KVSDPDVKML 428
             ++      + + +    D +K+  +++EE                         +  L
Sbjct: 51  YKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFL 110

Query: 429 MEAADVDGNGLLSCDEFVTMSVHLKRIG-NDDILSQAFRFFDKNQSGFIEVDELKEVLLE 487
            +  DV G+G++  +EF       K        +   +           +++  KE+   
Sbjct: 111 FKGMDVSGDGIVDLEEFQNY---CKNFQLQCADVPAVYNVITDGGKVTFDLNRYKELYYR 167

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

 Score = 65.1 bits (157), Expect = 2e-13
 Identities = 27/140 (19%), Positives = 63/140 (45%), Gaps = 10/140 (7%)

Query: 386 MAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEF 445
           MA+   +F  +D + +G +++EE+K  ++      ++  ++++ ++ D DGNG +  +EF
Sbjct: 1   MAE--ALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEF 58

Query: 446 VT---MSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDIL 502
                         +   L   ++  D +  G +  +E+     +     +G + + + +
Sbjct: 59  AKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKK-----HGIEKVAEQV 113

Query: 503 RDVDLDRDGRISFEEFKAMM 522
              D + DG I+ EEF    
Sbjct: 114 MKADANGDGYITLEEFLEFS 133

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 63.0 bits (153), Expect = 3e-13
 Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFE 516
           +++ L+  FR FDKN  GFI+++EL E+L         +  I D+++D D + DGRI F+
Sbjct: 7   SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEED-IEDLMKDSDKNNDGRIDFD 65

Query: 517 EFKAMMTS 524
           EF  MM  
Sbjct: 66  EFLKMMEG 73

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 54.2 bits (130), Expect = 3e-10
 Identities = 18/65 (27%), Positives = 35/65 (53%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
               ++   F + D + +G +  EEL + L   G+ V + D++ LM+ +D + +G +  D
Sbjct: 6   KSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFD 65

Query: 444 EFVTM 448
           EF+ M
Sbjct: 66  EFLKM 70

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 36.8 bits (85), Expect = 5e-04
 Identities = 11/65 (16%), Positives = 27/65 (41%)

Query: 421 SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDE 480
           S+ ++       D + +G +  +E   +         ++ +    +  DKN  G I+ DE
Sbjct: 7   SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 66

Query: 481 LKEVL 485
             +++
Sbjct: 67  FLKMM 71

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 66.1 bits (160), Expect = 3e-13
 Identities = 25/162 (15%), Positives = 58/162 (35%), Gaps = 17/162 (10%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQ--------KVSDPDVKMLMEAADVD 435
           +++ Q +++F  +    + +++  EL + LN +                 + ++   D D
Sbjct: 1   EEVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59

Query: 436 GNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGD 495
             G L  +EF  +  +             ++ FD ++SG I   EL           N  
Sbjct: 60  TTGKLGFEEFKYLWNN------IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLN-- 111

Query: 496 QTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSR 537
           + +  ++     D  G + F+ F + +        A +   +
Sbjct: 112 EHLYSMIIRRYSDEGGNMDFDNFISCLVRLDAMFRAFKSLDK 153

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 51.5 bits (122), Expect = 3e-08
 Identities = 20/99 (20%), Positives = 44/99 (44%), Gaps = 7/99 (7%)

Query: 382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLS 441
             + + + + ++   D D++G +   EL       G  +++    M++     D  G + 
Sbjct: 72  LWNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMD 130

Query: 442 CDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDE 480
            D F++  V L        + +AF+  DK+ +G I+V+ 
Sbjct: 131 FDNFISCLVRLDA------MFRAFKSLDKDGTGQIQVNI 163

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 63.0 bits (153), Expect = 3e-13
 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
           + +AFR FD + SG I + +L+ V  E       ++ +++++ + D + D  I  +EF  
Sbjct: 11  ILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEE-LQEMIAEADRNDDNEIDEDEFIR 69

Query: 521 MMT 523
           +M 
Sbjct: 70  IMK 72

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 60.7 bits (147), Expect = 2e-12
 Identities = 14/66 (21%), Positives = 38/66 (57%)

Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSC 442
           +D   +I + F + D D +G +T ++L+     +G+ +++ +++ ++  AD + +  +  
Sbjct: 5   RDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDE 64

Query: 443 DEFVTM 448
           DEF+ +
Sbjct: 65  DEFIRI 70

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 39.1 bits (91), Expect = 8e-05
 Identities = 12/69 (17%), Positives = 29/69 (42%)

Query: 417 GQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFI 476
           G++ S  ++       D D +G ++  +   ++  L     ++ L +     D+N    I
Sbjct: 3   GERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEI 62

Query: 477 EVDELKEVL 485
           + DE   ++
Sbjct: 63  DEDEFIRIM 71

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.5 bits (158), Expect = 4e-13
 Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 9/152 (5%)

Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
             +   D++ ++ + F  +D D +G L+ EE       + +   +P V+ +++  D DGN
Sbjct: 7   CSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFM----SLPELQQNPLVQRVIDIFDTDGN 62

Query: 438 GLLSCDEFVTMSVHL-KRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQ 496
           G +   EF+        +   +  L  AFR +D ++ G+I   EL +VL         D 
Sbjct: 63  GEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDT 122

Query: 497 T----IRDILRDVDLDRDGRISFEEFKAMMTS 524
                +   + + D D DGRISFEEF A++  
Sbjct: 123 QLQQIVDKTIINADKDGDGRISFEEFCAVVGG 154

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 64.3 bits (155), Expect = 6e-13
 Identities = 27/144 (18%), Positives = 61/144 (42%), Gaps = 8/144 (5%)

Query: 388 QIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVT 447
             K +F + D    G +  + L D L  IG   ++  V+ ++ A     +      + +T
Sbjct: 3   ANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQIT 62

Query: 448 MSVHLK-------RIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRD 500
             + +             +   +AF+ FDK  +G + V +L+ +L          + + +
Sbjct: 63  GLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAE-VDE 121

Query: 501 ILRDVDLDRDGRISFEEFKAMMTS 524
           +L+ V++D +G I +++F   +  
Sbjct: 122 LLKGVEVDSNGEIDYKKFIEDVLR 145

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.5 bits (88), Expect = 6e-04
 Identities = 20/143 (13%), Positives = 54/143 (37%), Gaps = 6/143 (4%)

Query: 311 SKEAKELVKNMLDPNPYNRLTLEEVLE-----NPWIKNDNHAPNVSLGGNVTSRIKQFSI 365
           ++  K++   + D      +  + + +          N      ++   ++         
Sbjct: 1   TRANKDIFT-LFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLD 59

Query: 366 MNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDV 425
                 +V     D   + +     + F + D +  G ++  +L+  L  +G+K++D +V
Sbjct: 60  QITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEV 119

Query: 426 KMLMEAADVDGNGLLSCDEFVTM 448
             L++  +VD NG +   +F+  
Sbjct: 120 DELLKGVEVDSNGEIDYKKFIED 142

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

 Score = 65.0 bits (157), Expect = 9e-13
 Identities = 30/171 (17%), Positives = 55/171 (32%), Gaps = 22/171 (12%)

Query: 374 LRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEEL-----KDGLNMIGQKVSDPDVKML 428
           +++  D      + + K MF  +D + NG +T +E+      D    +           +
Sbjct: 1   VKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQV 60

Query: 429 MEAAD-----VDGNGLLSCDEFVTMSVHLKRIGN-----------DDILSQAFRFFDKNQ 472
              A      ++    ++  +F+     L                 +     F  FDK+ 
Sbjct: 61  CVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDG 120

Query: 473 SGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT 523
           SG I +DE K         P+  +      R  DLD  G +  +E      
Sbjct: 121 SGTITLDEWKAYGKISGISPS-QEDCEATFRHCDLDNAGDLDVDEMTRQHL 170

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

 Score = 46.5 bits (109), Expect = 2e-06
 Identities = 30/160 (18%), Positives = 50/160 (31%), Gaps = 20/160 (12%)

Query: 308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLE-------------------NPWIKNDNHAP 348
           P+  K  K +    LD N   ++TL+E++                    +          
Sbjct: 10  PRWIKRHKHMFD-FLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRG 68

Query: 349 NVSLGGNVTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEE 408
                G   +  +      +     L+  A N P         +F + D D +G +T +E
Sbjct: 69  CGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDE 128

Query: 409 LKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
            K    + G   S  D +      D+D  G L  DE    
Sbjct: 129 WKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQ 168

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 61.1 bits (148), Expect = 1e-12
 Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 463 QAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM 522
           + F  FDKN+ G + +DE +EV L  +      + I     ++D+D +G ++ +EF + +
Sbjct: 5   RVFEKFDKNKDGKLSLDEFREVALAFSPYFT-QEDIVKFFEEIDVDGNGELNADEFTSCI 63

Query: 523 TS 524
             
Sbjct: 64  EK 65

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 57.6 bits (139), Expect = 2e-11
 Identities = 19/62 (30%), Positives = 32/62 (51%)

Query: 387 AQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFV 446
           +  K++F   D +K+G L+ +E ++         +  D+    E  DVDGNG L+ DEF 
Sbjct: 1   SSAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFT 60

Query: 447 TM 448
           + 
Sbjct: 61  SC 62

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.8 bits (90), Expect = 7e-05
 Identities = 14/62 (22%), Positives = 27/62 (43%)

Query: 424 DVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKE 483
             K + E  D + +G LS DEF  +++        + + + F   D + +G +  DE   
Sbjct: 2   SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61

Query: 484 VL 485
            +
Sbjct: 62  CI 63

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 64.9 bits (157), Expect = 1e-12
 Identities = 24/175 (13%), Positives = 60/175 (34%), Gaps = 18/175 (10%)

Query: 366 MNKFKKKVLRVVAD--NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV-SD 422
                K++L  +       +++++   Q F  +    +G +T +E +   +    +    
Sbjct: 5   SGALSKEILEELQLNTKFTEEELSSWYQSF--LKECPSGRITRQEFQTIYSKFFPEADPK 62

Query: 423 PDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELK 482
              + +  + D + +G L   E+V           +  L  AF  +D + +G I  +E+ 
Sbjct: 63  AYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVL 122

Query: 483 EVLLE-------------DNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           E++                      ++    I        D +++ +EF     +
Sbjct: 123 EIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLA 177

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 47.1 bits (111), Expect = 1e-06
 Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 14/114 (12%)

Query: 389 IKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
            + +F   D + +G L F+E    L+M     ++  ++      DVDGNG +S +E + +
Sbjct: 65  AQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEI 124

Query: 449 SVHLKRIGNDD--------------ILSQAFRFFDKNQSGFIEVDELKEVLLED 488
              + ++ + +                 + + FF K     +   E  E  L +
Sbjct: 125 VTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLAN 178

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 60.4 bits (146), Expect = 2e-12
 Identities = 22/68 (32%), Positives = 40/68 (58%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L ++ +A+ K  F M D D  GD++ +EL   + M+GQ  +  ++  ++E  D DG+G +
Sbjct: 8   LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 67

Query: 441 SCDEFVTM 448
             +EF+ M
Sbjct: 68  DFEEFLVM 75

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 58.1 bits (140), Expect = 2e-11
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
              AF  FD +  G I   EL  V+      P   + +  I+ +VD D  G I FEEF  
Sbjct: 16  FKAAFDMFDADGGGDISTKELGTVMRMLGQNPT-KEELDAIIEEVDEDGSGTIDFEEFLV 74

Query: 521 MMT 523
           MM 
Sbjct: 75  MMV 77

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 34.6 bits (79), Expect = 0.004
 Identities = 15/64 (23%), Positives = 28/64 (43%)

Query: 424 DVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKE 483
           + K   +  D DG G +S  E  T+   L +    + L       D++ SG I+ +E   
Sbjct: 15  EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 74

Query: 484 VLLE 487
           +++ 
Sbjct: 75  MMVR 78

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

 Score = 60.0 bits (145), Expect = 3e-12
 Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFE 516
            ++ LS  FR FDKN  G+I+++ELK +L         D  I ++++D D + DGRI ++
Sbjct: 13  TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDD-IEELMKDGDKNNDGRIDYD 71

Query: 517 EFKAMMTS 524
           EF   M  
Sbjct: 72  EFLEFMKG 79

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

 Score = 56.5 bits (136), Expect = 6e-11
 Identities = 20/75 (26%), Positives = 40/75 (53%)

Query: 374 LRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAAD 433
           +R + D+       ++  +F M D + +G +  EELK  L   G+ +++ D++ LM+  D
Sbjct: 2   VRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGD 61

Query: 434 VDGNGLLSCDEFVTM 448
            + +G +  DEF+  
Sbjct: 62  KNNDGRIDYDEFLEF 76

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

 Score = 36.5 bits (84), Expect = 7e-04
 Identities = 14/65 (21%), Positives = 28/65 (43%)

Query: 421 SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDE 480
           ++ ++  L    D + +G +  +E   M         +D + +  +  DKN  G I+ DE
Sbjct: 13  TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 72

Query: 481 LKEVL 485
             E +
Sbjct: 73  FLEFM 77

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

 Score = 59.6 bits (144), Expect = 4e-12
 Identities = 22/68 (32%), Positives = 42/68 (61%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           L ++Q+A+ K+ F + D D +G +T +EL   +  +GQ  ++ +++ ++   D DGNG +
Sbjct: 2   LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61

Query: 441 SCDEFVTM 448
              EF+TM
Sbjct: 62  DFPEFLTM 69

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

 Score = 55.0 bits (132), Expect = 2e-10
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
             +AF  FDK+  G I   EL  V+      P  +  ++D++ +VD D +G I F EF  
Sbjct: 10  FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPEFLT 68

Query: 521 MMT 523
           MM 
Sbjct: 69  MMA 71

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

 Score = 59.9 bits (145), Expect = 4e-12
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
             + F+ FD N  G I   EL + L    +    +   R ++ ++D D DG ISF+EF  
Sbjct: 8   RERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEV--RRMMAEIDTDGDGFISFDEFTD 65

Query: 521 MMTSGAD 527
              +   
Sbjct: 66  FARANRG 72

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

 Score = 54.9 bits (132), Expect = 3e-10
 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCD 443
             +A  +++F   DT+ +G ++  EL D L  +   V+  +V+ +M   D DG+G +S D
Sbjct: 3   QDIADRERIFKRFDTNGDGKISSSELGDALKTL-GSVTPDEVRRMMAEIDTDGDGFISFD 61

Query: 444 EFVTM 448
           EF   
Sbjct: 62  EFTDF 66

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

 Score = 64.7 bits (156), Expect = 6e-12
 Identities = 29/227 (12%), Positives = 74/227 (32%), Gaps = 18/227 (7%)

Query: 299 KIDFERDPWPKVSKEAKELVKNM---LDPNPYNRLTLEEVLENPWIKNDNHAPNVSLGGN 355
             +  R   P +S+E   +++ +      +   + + +++ +   +              
Sbjct: 105 GYNRLRPSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQ--VLAKYADTIPEG---P 159

Query: 356 VTSRIKQFSIMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNM 415
           +           K +   + +VA       +    +              F E    L  
Sbjct: 160 LKKLFVMVENDTKGRMSYITLVAVANDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGF 219

Query: 416 IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGF 475
             + V D   +   E             + V  S ++       +L   + F D ++SG 
Sbjct: 220 DKKSVQDALFRYADE----------DESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQ 269

Query: 476 IEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM 522
           +  +E+++VL + +   +  +        VD+D    +S++EF  ++
Sbjct: 270 LSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLV 316

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

 Score = 62.0 bits (149), Expect = 5e-11
 Identities = 30/195 (15%), Positives = 60/195 (30%), Gaps = 22/195 (11%)

Query: 370 KKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLM 429
               LR     L ++    ++Q+F       +G  +F++LK  L      + +  +K L 
Sbjct: 105 GYNRLRPSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLF 164

Query: 430 EAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDN 489
              + D  G +S    V ++  L  +  D            ++  F E         +  
Sbjct: 165 VMVENDTKGRMSYITLVAVANDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKSV 224

Query: 490 AGPNGDQTIRDILRDV----------------------DLDRDGRISFEEFKAMMTSGAD 527
                     D   DV                      D D+ G++S EE + ++     
Sbjct: 225 QDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLEDAHI 284

Query: 528 WKMASRQYSRAMMSA 542
            + A +++       
Sbjct: 285 PESARKKFEHQFSVV 299

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (146), Expect = 2e-11
 Identities = 11/145 (7%), Positives = 34/145 (23%), Gaps = 18/145 (12%)

Query: 395 MMDTDKNGDLTFEELKDGLNMIGQKVSDP--DVKMLMEAADVDGNGLLSCDEFVTMSVHL 452
            M  +  G +  +          ++V        +     D           + +    +
Sbjct: 15  KMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSF--LM 72

Query: 453 KRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQT-------------IR 499
                 +I  + F  +      ++  + L + + +       +               I 
Sbjct: 73  SLCPRPEID-EIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLID 131

Query: 500 DILRDVDLDRDGRISFEEFKAMMTS 524
                    + G++S E     +  
Sbjct: 132 KYEPSGINAQRGQLSPEGMVWFLCG 156

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 56.0 bits (135), Expect = 8e-11
 Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 3/67 (4%)

Query: 461 LSQAFRFFDKNQ--SGFIEVDELKEVLLEDNAG-PNGDQTIRDILRDVDLDRDGRISFEE 517
           L   F  +   +     +  +ELK+++  +      G +T+ D+ +++D + DG +SFEE
Sbjct: 9   LKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEE 68

Query: 518 FKAMMTS 524
           F+ ++  
Sbjct: 69  FQVLVKK 75

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 48.7 bits (116), Expect = 3e-08
 Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 4/76 (5%)

Query: 383 QDQMAQIKQMFYMMDT--DKNGDLTFEELKDGLNMIGQ--KVSDPDVKMLMEAADVDGNG 438
           Q   A++K +F            L+ EELK  +             +  L +  D +G+G
Sbjct: 3   QKSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDG 62

Query: 439 LLSCDEFVTMSVHLKR 454
            +S +EF  +   + +
Sbjct: 63  EVSFEEFQVLVKKISQ 78

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 55.8 bits (134), Expect = 8e-11
 Identities = 22/65 (33%), Positives = 42/65 (64%), Gaps = 1/65 (1%)

Query: 458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEE 517
           ++ + +AFR FDK+ +G+I   EL+ V+         D+ + +++R+ D+D DG++++EE
Sbjct: 2   EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT-DEEVDEMIREADIDGDGQVNYEE 60

Query: 518 FKAMM 522
           F  MM
Sbjct: 61  FVQMM 65

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 54.2 bits (130), Expect = 3e-10
 Identities = 21/61 (34%), Positives = 41/61 (67%)

Query: 388 QIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVT 447
           +I++ F + D D NG ++  EL+  +  +G+K++D +V  ++  AD+DG+G ++ +EFV 
Sbjct: 4   EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 63

Query: 448 M 448
           M
Sbjct: 64  M 64

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 36.1 bits (83), Expect = 7e-04
 Identities = 14/65 (21%), Positives = 30/65 (46%)

Query: 421 SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDE 480
           S+ +++      D DGNG +S  E   +  +L     D+ + +  R  D +  G +  +E
Sbjct: 1   SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 60

Query: 481 LKEVL 485
             +++
Sbjct: 61  FVQMM 65

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

 Score = 54.8 bits (132), Expect = 3e-10
 Identities = 10/60 (16%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 466 RFFDKNQSGFIE-VDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS 524
           ++     +      D+LK++L  ++      +      +++D++ DG ++F+EF  ++  
Sbjct: 18  KYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIK 77

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

 Score = 44.1 bits (104), Expect = 2e-06
 Identities = 10/66 (15%), Positives = 27/66 (40%), Gaps = 3/66 (4%)

Query: 386 MAQIKQMFYM-MDTDKNGD-LTFEELKDGL-NMIGQKVSDPDVKMLMEAADVDGNGLLSC 442
           +  I  +++       N   +  ++LK  L     Q +      +  +  D++ +G ++ 
Sbjct: 9   LNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNF 68

Query: 443 DEFVTM 448
            EF+ +
Sbjct: 69  QEFLIL 74

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

 Score = 53.0 bits (127), Expect = 1e-09
 Identities = 13/68 (19%), Positives = 34/68 (50%), Gaps = 5/68 (7%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNG----DQTIRDILRDVDLDRDGRISFE 516
           +   F  F  +  G++  ++L+ ++ ++  G          +  I++D+D  RDG++ F+
Sbjct: 11  MMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQ 69

Query: 517 EFKAMMTS 524
            F +++  
Sbjct: 70  SFFSLIAG 77

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

 Score = 47.6 bits (113), Expect = 1e-07
 Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 6/81 (7%)

Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIG-----QKVSDPDVKMLMEAADVDGN 437
           +  M  +   F+    DK G LT E+L+  +          +     V  +M+  D   +
Sbjct: 5   EHAMETMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRD 63

Query: 438 GLLSCDEFVTMSVHLKRIGND 458
           G +    F ++   L    ND
Sbjct: 64  GKVGFQSFFSLIAGLTIACND 84

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

 Score = 52.9 bits (127), Expect = 2e-09
 Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 6/76 (7%)

Query: 459 DILSQAFR-FFDKN-QSGFIEVDELKEVL----LEDNAGPNGDQTIRDILRDVDLDRDGR 512
           D++   F  +  K      +   ELKE+L             +   + ++ ++D +RD  
Sbjct: 9   DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNE 68

Query: 513 ISFEEFKAMMTSGADW 528
           + F+E+   ++  A  
Sbjct: 69  VDFQEYCVFLSCIAMM 84

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

 Score = 49.5 bits (118), Expect = 3e-08
 Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 9/84 (10%)

Query: 383 QDQMAQIKQMFYMMDTDKNGD---LTFEELKDGLNMIG-----QKVSDPDVKMLMEAADV 434
           +  +  +   F+     K GD   L   ELK+ L         ++  +   + LM   D 
Sbjct: 5   EKALDVMVSTFHKYS-GKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDS 63

Query: 435 DGNGLLSCDEFVTMSVHLKRIGND 458
           + +  +   E+      +  + N+
Sbjct: 64  NRDNEVDFQEYCVFLSCIAMMCNE 87

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.4 bits (125), Expect = 3e-09
 Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 15/79 (18%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVL------LEDNAGPNGD---------QTIRDILRDV 505
               F   D N  G ++  EL+ +       + D      D         +    ++++V
Sbjct: 18  PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNV 77

Query: 506 DLDRDGRISFEEFKAMMTS 524
           D ++D  ++ EEF A    
Sbjct: 78  DTNQDRLVTLEEFLASTQR 96

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (121), Expect = 1e-08
 Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 16/83 (19%)

Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPD----------------VK 426
                  K  F + D + +G L  +EL+       +KV DP                  +
Sbjct: 12  DPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMRE 71

Query: 427 MLMEAADVDGNGLLSCDEFVTMS 449
            +M+  D + + L++ +EF+  +
Sbjct: 72  HVMKNVDTNQDRLVTLEEFLAST 94

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

 Score = 52.1 bits (125), Expect = 3e-09
 Identities = 10/64 (15%), Positives = 25/64 (39%), Gaps = 5/64 (7%)

Query: 466 RFFDKNQSGF-IEVDELKEVLLEDNAG----PNGDQTIRDILRDVDLDRDGRISFEEFKA 520
            +  +    + +   ELKE+L ++ A        +      +  +D ++D  + F E+  
Sbjct: 17  EYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVR 76

Query: 521 MMTS 524
            +  
Sbjct: 77  SLAC 80

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

 Score = 42.5 bits (100), Expect = 6e-06
 Identities = 13/73 (17%), Positives = 23/73 (31%), Gaps = 7/73 (9%)

Query: 383 QDQMAQIKQMFYM-MDTDKNGD-LTFEELKDGLNMIGQ-----KVSDPDVKMLMEAADVD 435
           +  +A I   F        +   L   ELK+ L          +  + D    M   D +
Sbjct: 5   EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTN 64

Query: 436 GNGLLSCDEFVTM 448
            +  +   E+V  
Sbjct: 65  KDCEVDFVEYVRS 77

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 50.8 bits (121), Expect = 4e-09
 Identities = 15/59 (25%), Positives = 33/59 (55%)

Query: 388 QIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFV 446
              + F + D +  G ++  +L+  L  +G+K++D +V  L++  +VD NG +   +F+
Sbjct: 2   DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 60

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.3 bits (117), Expect = 1e-08
 Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEF 518
             +AF+ FDK  +G + V +L+ +L         D  + ++L+ V++D +G I +++F
Sbjct: 3   FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLT-DAEVDELLKGVEVDSNGEIDYKKF 59

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

 Score = 53.9 bits (128), Expect = 5e-09
 Identities = 25/156 (16%), Positives = 57/156 (36%), Gaps = 7/156 (4%)

Query: 382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLS 441
             +   ++ + F  +DTD +G ++  EL   L+  G   S    + L+   D + +G ++
Sbjct: 13  HMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEIT 72

Query: 442 CDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDI 501
            DEF  +   +  +        +      + +            +        +QT + +
Sbjct: 73  FDEFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVS-------EQTFQAL 125

Query: 502 LRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSR 537
           +R  D  R G + F+++  +       +     Y R
Sbjct: 126 MRKFDRQRRGSLGFDDYVELSIFVCRVRNVFAFYDR 161

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

 Score = 47.0 bits (110), Expect = 1e-06
 Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSC 442
              +  +++ F   D+  +G L   E++  L   G +VS+   + LM   D    G L  
Sbjct: 80  HHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGF 139

Query: 443 DEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVD 479
           D++V +S+ + R      +   F F+D+ ++G +   
Sbjct: 140 DDYVELSIFVCR------VRNVFAFYDRERTGQVTFT 170

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.2 bits (126), Expect = 9e-09
 Identities = 31/178 (17%), Positives = 62/178 (34%), Gaps = 40/178 (22%)

Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQK-VSDPDVKMLMEAADVDG 436
           A        + +  +F  +D D++G ++  EL+  L+       +   V+ ++   D + 
Sbjct: 10  AAGAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDREN 69

Query: 437 NGLLSCDEFVTMSVH------------------------------LKRIGNDDILSQAFR 466
              ++  EF  +  +                                   +D       R
Sbjct: 70  KAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIR 129

Query: 467 FFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRI--SFEEFKAMM 522
            FD+   G I  D+  +  +         Q + DI R  D D+DG I  S+E++ +M+
Sbjct: 130 KFDRQGRGQIAFDDFIQGCIV-------LQRLTDIFRRYDTDQDGWIQVSYEQYLSMV 180

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.9 bits (89), Expect = 5e-04
 Identities = 24/99 (24%), Positives = 39/99 (39%)

Query: 457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFE 516
           +   L   F+  DK++SG I  +EL++ L      P    T+R I+   D +    ++F 
Sbjct: 17  DQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFS 76

Query: 517 EFKAMMTSGADWKMASRQYSRAMMSALSIKLFKDKSMEL 555
           EF  +     DW+   R Y R     +     K      
Sbjct: 77  EFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGF 115

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

 Score = 50.3 bits (120), Expect = 1e-08
 Identities = 11/63 (17%), Positives = 31/63 (49%), Gaps = 2/63 (3%)

Query: 466 RFFDKN-QSGFIEVDELKEVLLEDNAGPNGD-QTIRDILRDVDLDRDGRISFEEFKAMMT 523
            F  +  +   + V+E KE++ +       D  ++ + ++ +D+++D  + F E+  ++ 
Sbjct: 22  TFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIG 81

Query: 524 SGA 526
             A
Sbjct: 82  ELA 84

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

 Score = 41.4 bits (97), Expect = 2e-05
 Identities = 11/88 (12%), Positives = 30/88 (34%), Gaps = 6/88 (6%)

Query: 384 DQMAQIKQMFYMMDTDKNGD---LTFEELKDGLNMIG--QKVSDPDVKMLMEAADVDGNG 438
           + +  +   F+     + G    L+  E K+ +             +   M++ DV+ + 
Sbjct: 11  ESIETVVTTFFTFA-RQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDS 69

Query: 439 LLSCDEFVTMSVHLKRIGNDDILSQAFR 466
            L  +E+  +   L +        +  +
Sbjct: 70  ELKFNEYWRLIGELAKEIRKKKDLKIRK 97

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.5 bits (118), Expect = 2e-08
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 3/66 (4%)

Query: 461 LSQAFRFFD--KNQSGFIEVDELKEVLLE-DNAGPNGDQTIRDILRDVDLDRDGRISFEE 517
           +  AF  F   +     I  +ELK V+     +   G  T+ +++ +VD + DG +SFEE
Sbjct: 7   IKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEE 66

Query: 518 FKAMMT 523
           F  MM 
Sbjct: 67  FLVMMK 72

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 42.6 bits (100), Expect = 4e-06
 Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 4/68 (5%)

Query: 385 QMAQIKQMFYMMDTDK--NGDLTFEELKDGLNMIGQKVSDPD--VKMLMEAADVDGNGLL 440
              +IK  F +    +     ++ EELK  +  +G  +      +  ++E  D +G+G +
Sbjct: 3   SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEV 62

Query: 441 SCDEFVTM 448
           S +EF+ M
Sbjct: 63  SFEEFLVM 70

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

 Score = 49.9 bits (119), Expect = 2e-08
 Identities = 12/64 (18%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 466 RFFDKNQSGF-IEVDELKEVLLEDNAGPN--GDQTIRDILRDVDLDRDGRISFEEFKAMM 522
           ++  +      +   ELKE++ ++    +   D  I  ++ D+D ++D  ++F+E+   +
Sbjct: 17  KYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFL 76

Query: 523 TSGA 526
            + A
Sbjct: 77  GALA 80

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

 Score = 39.1 bits (91), Expect = 1e-04
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 7/71 (9%)

Query: 384 DQMAQIKQMFYMMDTDKNGD------LTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGN 437
             +  +  +F+     + GD         +EL      IG K+ D ++  LME  D + +
Sbjct: 6   QAIGLLVAIFHKYS-GREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKD 64

Query: 438 GLLSCDEFVTM 448
             ++  E+VT 
Sbjct: 65  QEVNFQEYVTF 75

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.4 bits (117), Expect = 2e-08
 Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 9/84 (10%)

Query: 365 IMNKFKKKVLRVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPD 424
           I+ +  K V               I Q F   DT K   ++ EE +   N   Q ++D  
Sbjct: 7   ILARLHKAV---------TSHYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQ 57

Query: 425 VKMLMEAADVDGNGLLSCDEFVTM 448
              L     V+  G L   +F++ 
Sbjct: 58  FDRLWNEMPVNAKGRLKYPDFLSR 81

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (108), Expect = 4e-07
 Identities = 10/67 (14%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFE 516
           +   ++Q F  FD  ++  I  +E + +          D+    +  ++ ++  GR+ + 
Sbjct: 18  HYHAITQEFENFDTMKTNTISREEFRAICNRRVQILT-DEQFDRLWNEMPVNAKGRLKYP 76

Query: 517 EFKAMMT 523
           +F +  +
Sbjct: 77  DFLSRFS 83

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

 Score = 49.2 bits (117), Expect = 3e-08
 Identities = 14/74 (18%), Positives = 28/74 (37%), Gaps = 6/74 (8%)

Query: 461 LSQAFR-FFDKN-QSGFIEVDELKEV----LLEDNAGPNGDQTIRDILRDVDLDRDGRIS 514
           L   F     K      +   ELK++    L            +  I++++D + DG + 
Sbjct: 11  LINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVD 70

Query: 515 FEEFKAMMTSGADW 528
           F+EF  ++ +    
Sbjct: 71  FQEFVVLVAALTVA 84

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

 Score = 44.2 bits (104), Expect = 2e-06
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 9/84 (10%)

Query: 383 QDQMAQIKQMFYMMDTDKNGD---LTFEELKDGLNMIG-----QKVSDPDVKMLMEAADV 434
           +  M  +  +F+     K GD   L+ +ELKD L          +     V  +M+  D 
Sbjct: 5   ETAMETLINVFHAHS-GKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDE 63

Query: 435 DGNGLLSCDEFVTMSVHLKRIGND 458
           +G+G +   EFV +   L    N+
Sbjct: 64  NGDGEVDFQEFVVLVAALTVACNN 87

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (115), Expect = 6e-08
 Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 3/72 (4%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           +   + A+  ++F   D D +G ++  E+++    +   +    +  +    D    G L
Sbjct: 4   VSPAEKAKYDEIFLKTDKDMDGFVSGLEVRE--IFLKTGLPSTLLAHIWSLCDTKDCGKL 61

Query: 441 SCDEFVTMSVHL 452
           S D+F     HL
Sbjct: 62  SKDQFALA-FHL 72

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.8 bits (108), Expect = 5e-07
 Identities = 13/62 (20%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
             + F   DK+  GF+   E++E+ L+          +  I    D    G++S ++F  
Sbjct: 12  YDEIFLKTDKDMDGFVSGLEVREIFLKTG---LPSTLLAHIWSLCDTKDCGKLSKDQFAL 68

Query: 521 MM 522
             
Sbjct: 69  AF 70

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

 Score = 46.9 bits (111), Expect = 3e-07
 Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 8/72 (11%)

Query: 461 LSQAFRFFDK--NQSGFIEVDELKEVL------LEDNAGPNGDQTIRDILRDVDLDRDGR 512
           +      F K   +   I+   L  ++              G   + D+    D + D +
Sbjct: 9   IIGMIDMFHKYTRRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKK 68

Query: 513 ISFEEFKAMMTS 524
           I F EF +++  
Sbjct: 69  IDFSEFLSLLGD 80

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

 Score = 42.3 bits (99), Expect = 9e-06
 Identities = 9/94 (9%), Positives = 29/94 (30%), Gaps = 8/94 (8%)

Query: 378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIG-------QKVSDPDVKMLME 430
           ++   +  +  +  MF+     ++  +    L   +            K     +  + E
Sbjct: 1   SNTQAERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFE 59

Query: 431 AADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQA 464
             D + +  +   EF+++   +    +      A
Sbjct: 60  KKDKNEDKKIDFSEFLSLLGDIATDYHKQSHGAA 93

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Length = 99

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.8 bits (108), Expect = 6e-07
 Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 3/67 (4%)

Query: 456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISF 515
             + +  + +R  +   +G +   +    L +          +  I    D D  G +S 
Sbjct: 8   SGNPVYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPD---LILGKIWDLADTDGKGVLSK 64

Query: 516 EEFKAMM 522
           +EF   +
Sbjct: 65  QEFFVAL 71

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Length = 99

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.5 bits (89), Expect = 2e-04
 Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 390 KQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM 448
           ++ +  ++    G +   +    L   G       +  + + AD DG G+LS  EF   
Sbjct: 14  EKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLI--LGKIWDLADTDGKGVLSKQEFFVA 70

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

 Score = 44.8 bits (106), Expect = 1e-06
 Identities = 11/66 (16%), Positives = 30/66 (45%), Gaps = 5/66 (7%)

Query: 466 RFFDKNQSGF-IEVDELKEVLLED----NAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
           ++  +      +   ELK++L ++             I +I + +D ++D ++ F+EF +
Sbjct: 16  QYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFIS 75

Query: 521 MMTSGA 526
           ++    
Sbjct: 76  LVAIAL 81

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 1e-06
 Identities = 16/72 (22%), Positives = 33/72 (45%), Gaps = 4/72 (5%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           +  +  A+   +F  +    NG L+ +++K  L      +    +  + E +D+D +G+L
Sbjct: 4   VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGML 60

Query: 441 SCDEFVTMSVHL 452
             DEF    + L
Sbjct: 61  DRDEFAVA-MFL 71

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (83), Expect = 0.001
 Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 4/62 (6%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
               F       +GF+  D++K V    N+       +  +    D+D DG +  +EF  
Sbjct: 12  YDAIFDSLS-PVNGFLSGDKVKPV--LLNSKLP-VDILGRVWELSDIDHDGMLDRDEFAV 67

Query: 521 MM 522
            M
Sbjct: 68  AM 69

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.6 bits (105), Expect = 1e-06
 Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 4/80 (5%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           +  +Q       F  +  D NG +     K+       K+   ++  + E +D D +G L
Sbjct: 3   ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKE--FFTKSKLPILELSHIWELSDFDKDGAL 60

Query: 441 SCDEFVTMS--VHLKRIGND 458
           + DEF      V  ++ G D
Sbjct: 61  TLDEFCAAFHLVVARKNGYD 80

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.5 bits (89), Expect = 2e-04
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
               F+    + +GFI     KE   +          +  I    D D+DG ++ +EF A
Sbjct: 11  YVNQFKTIQPDLNGFIPGSAAKEFFTKSK---LPILELSHIWELSDFDKDGALTLDEFCA 67

Query: 521 MM 522
             
Sbjct: 68  AF 69

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} Length = 392

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

 Score = 46.7 bits (110), Expect = 4e-06
 Identities = 21/136 (15%), Positives = 46/136 (33%), Gaps = 6/136 (4%)

Query: 87  KELGRGEFGITHQCFEIETGETYACKKIAKEKLK-----TEIDIDDVRREVEIMRHLPKH 141
           +E+G G        ++ E        K A    K       + ID  R E   +    +H
Sbjct: 32  QEIGDGNLNYVFHIYDQEHDRAL-IIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEH 90

Query: 142 PNIVTYKEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHEN 201
              +  +  Y D +    VME     ++  + + +G      +  +G+ + + +    + 
Sbjct: 91  VPHLVPRVFYSDTEMAVTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDY 150

Query: 202 GVMHRDLKPENFLFAD 217
            +  +  K     F +
Sbjct: 151 ALEPKVKKQLVKQFTN 166

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 33

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

 Score = 39.5 bits (93), Expect = 2e-05
 Identities = 11/29 (37%), Positives = 21/29 (72%)

Query: 457 NDDILSQAFRFFDKNQSGFIEVDELKEVL 485
           +++ + +AFR FDK+ +G+I   EL+ V+
Sbjct: 1   SEEEIREAFRVFDKDGNGYISAAELRHVM 29

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} Length = 110

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 3e-04
 Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLL 440
           + ++Q       F  +  D +  ++    K+       K+S P++  + E +D D +G L
Sbjct: 16  ITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK--SKLSIPELSYIWELSDADCDGAL 73

Query: 441 SCDEFVTMSVHL 452
           +  EF     HL
Sbjct: 74  TLPEFCAA-FHL 84

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]} Length = 110

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 5e-04
 Identities = 14/62 (22%), Positives = 19/62 (30%), Gaps = 3/62 (4%)

Query: 461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA 520
               FR    + S FI     K    +          +  I    D D DG ++  EF A
Sbjct: 24  YVNQFRSLQPDPSSFISGSVAKNFFTKSK---LSIPELSYIWELSDADCDGALTLPEFCA 80

Query: 521 MM 522
             
Sbjct: 81  AF 82

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 34

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 36.0 bits (83), Expect = 4e-04
 Identities = 14/29 (48%), Positives = 23/29 (79%)

Query: 457 NDDILSQAFRFFDKNQSGFIEVDELKEVL 485
           +++ L+ AFR FDKN  G+I+++EL E+L
Sbjct: 2   SEEELANAFRIFDKNADGYIDIEELGEIL 30

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

 Score = 35.5 bits (82), Expect = 0.002
 Identities = 10/52 (19%), Positives = 21/52 (40%), Gaps = 6/52 (11%)

Query: 476 IEVDELKEVLLEDNAG-----PNGDQTIRDILRDVDLDRDGRISFEEFKAMM 522
           I   E     +                +  +++ +DLD DG++ F+EF  ++
Sbjct: 28  ISKTEFLI-FMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLI 78

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} Length = 90

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

 Score = 34.7 bits (80), Expect = 0.003
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 6/49 (12%)

Query: 479 DELKEVLLEDNAG-----PNGDQTIRDILRDVDLDRDGRISFEEFKAMM 522
            ELKE L+ +            + +  ++  +D D DG   F+EF A +
Sbjct: 31  SELKE-LINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFV 78

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} Length = 94

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 0.003
 Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 6/52 (11%)

Query: 476 IEVDELKEVLLEDNA-----GPNGDQTIRDILRDVDLDRDGRISFEEFKAMM 522
           +   ELK  L+E               +  +L+D+D + D ++ F EF   +
Sbjct: 28  LTKGELKV-LMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFV 78

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	586
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	99.92
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	99.91
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.91
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	99.9
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	99.9
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	99.9
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	99.9
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	99.89
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	99.89
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	99.89
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.89
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	99.87
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	99.86
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	99.86
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.86
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.86
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	99.85
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	99.85
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	99.85
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	99.85
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	99.84
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	99.83
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	99.83
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	99.82
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	99.82
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	99.82
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	99.82
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	99.81
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	99.81
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	99.8
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	99.8
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	99.8
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	99.8
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	99.8
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	99.8
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.79
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	99.79
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.79
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	99.79
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	99.78
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	99.78
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	99.78
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	99.78
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.77
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	99.77
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	99.75
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	99.75
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	99.75
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	99.74
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	99.71
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	99.71
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	99.7
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	99.7
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	99.7
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.7
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	99.7
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	99.69
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	99.69
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	99.67
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	99.67
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	99.67
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	99.66
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	99.65
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	99.63
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.6
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	99.6
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.6
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	99.6
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	99.59
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	99.59
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	99.58
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	99.58
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	99.58
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	99.58
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	99.55
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	99.54
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	99.52
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.48
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.48
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	99.47
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	99.47
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.47
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	99.47
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	99.45
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	99.45
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.45
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	99.44
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	99.44
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	99.44
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	99.43
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.42
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	99.42
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	99.41
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.4
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	99.4
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	99.4
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	99.39
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	99.39
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.39
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.39
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	99.37
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.37
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.37
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	99.36
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	99.35
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	99.35
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.34
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	99.33
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	99.31
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	99.28
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	99.25
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	99.14
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	99.13
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	99.11
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	99.1
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	99.07
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	99.03
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	99.02
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	99.01
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	99.0
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	98.99
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	98.99
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.95
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	98.95
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	98.95
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	98.95
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	98.94
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	98.94
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	98.93
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.92
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	98.92
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	98.9
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	98.89
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	98.87
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	98.83
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.83
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.82
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	98.81
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	98.8
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.79
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	98.79
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	98.78
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.74
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.73
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	98.73
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	98.65
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	98.63
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	98.63
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.54
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	98.48
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.39
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	98.35
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	98.35
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	98.21
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	98.17
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.07
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	98.03
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	98.03
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	97.93
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	97.92
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.78
d1tuza_	118	Diacylglycerol kinase alpha, N-terminal domain {Hu	97.71
d1tuza_	118	Diacylglycerol kinase alpha, N-terminal domain {Hu	97.55
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	96.77
d1sraa_	151	C-terminal (EC) domain of BM-40/SPARC/osteonectin	96.7
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	96.69
d1sraa_	151	C-terminal (EC) domain of BM-40/SPARC/osteonectin	96.49
d1qasa1	94	Phosphoinositide-specific phospholipase C, isozyme	95.04
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	94.71
d1j7qa_	86	Calcium vector protein {Amphioxus (Branchiostoma l	94.21
d1h8ba_	73	alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}	92.91
d2cclb1	59	Endo-1,4-beta-xylanase Y {Clostridium thermocellum	92.16
d1j7qa_	86	Calcium vector protein {Amphioxus (Branchiostoma l	91.18
d1qasa1	94	Phosphoinositide-specific phospholipase C, isozyme	90.63
d1dava_	71	Cellulosome endoglucanase SS {Clostridium thermoce	89.34
d2cclb1	59	Endo-1,4-beta-xylanase Y {Clostridium thermocellum	86.42
d1dava_	71	Cellulosome endoglucanase SS {Clostridium thermoce	84.21

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.2e-61  Score=479.15  Aligned_cols=264  Identities=41%  Similarity=0.757  Sum_probs=224.3

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .+.+.|++++.||+|+||+||+|+++.+|+.||||++.+......  ...+.+|+.+|+++ +|||||++++++++++.+
T Consensus         6 di~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~--~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~   82 (307)
T d1a06a_           6 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGK--EGSMENEIAVLHKI-KHPNIVALDDIYESGGHL   82 (307)
T ss_dssp             CGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC------------CHHHHHHHTC-CCTTBCCEEEEEECSSEE
T ss_pred             CCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhH--HHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEE
Confidence            456789999999999999999999999999999999987654332  35688999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          158 YLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |||||||+||+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+...+.++.+||+|||+|.....
T Consensus        83 ~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~  162 (307)
T d1a06a_          83 YLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP  162 (307)
T ss_dssp             EEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC--------
T ss_pred             EEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccC
Confidence            99999999999999999988999999999999999999999999999999999999997555678999999999988766


Q ss_pred             CCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          238 GEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       238 ~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      .......+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+...+...+.+....++.+.++.+|+++++
T Consensus       163 ~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~  242 (307)
T d1a06a_         163 GSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKD  242 (307)
T ss_dssp             ----------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHH
T ss_pred             CCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHH
Confidence            666667889999999999974 6899999999999999999999999999999999999999988888888899999999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ||.+||++||.+|||++|+|+||||++.
T Consensus       243 li~~~L~~dP~~R~s~~eil~hp~~~~~  270 (307)
T d1a06a_         243 FIRHLMEKDPEKRFTCEQALQHPWIAGD  270 (307)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHHSTTTTSS
T ss_pred             HHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence            9999999999999999999999999864

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-60  Score=462.62  Aligned_cols=255  Identities=33%  Similarity=0.583  Sum_probs=233.6

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++++.||+|+||+||+|+++.+|+.||+|++.+...........+.+|+.+++++ +|||||++++++.+++.+||
T Consensus         5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~i   83 (263)
T d2j4za1           5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-RHPNILRLYGYFHDATRVYL   83 (263)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-CCTTBCCEEEEEECSSEEEE
T ss_pred             hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhc-CCCCCCeEEEEEEECCEEEE
Confidence            46899999999999999999999999999999999876554445567899999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|...... 
T Consensus        84 vmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill---~~~~~~kl~DFG~a~~~~~~-  159 (263)
T d2j4za1          84 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL---GSAGELKIADFGWSVHAPSS-  159 (263)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEECCCCSCSCCCCC-
T ss_pred             EEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeecccccee---cCCCCEeecccceeeecCCC-
Confidence            99999999999999988899999999999999999999999999999999999999   56789999999999876543 


Q ss_pred             ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHH
Q 043828          240 QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV  318 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  318 (586)
                      .....+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+..++...+.+..+.++    +.+|+++++||
T Consensus       160 ~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li  235 (263)
T d2j4za1         160 RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLI  235 (263)
T ss_dssp             CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCHHHHHHH
T ss_pred             cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----ccCCHHHHHHH
Confidence            3456789999999999975 589999999999999999999999999999999999988876654    35899999999


Q ss_pred             HHccCCCCCCCCCHHHHhcCCCccC
Q 043828          319 KNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       319 ~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      .+||++||.+|||++|+|+||||+.
T Consensus       236 ~~~L~~dp~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         236 SRLLKHNPSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             HHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred             HHHccCCHhHCcCHHHHHcCcCcCC
Confidence            9999999999999999999999974

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-60  Score=461.67  Aligned_cols=259  Identities=28%  Similarity=0.525  Sum_probs=220.6

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      +.++|++++.||+|+||+||+|+++.+|+.||+|++.+.....  ..+.+.+|+.+|+++ +|||||++++++.+++.+|
T Consensus         3 f~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~--~~~~~~~Ei~~l~~l-~HpnIv~~~~~~~~~~~~~   79 (271)
T d1nvra_           3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD--CPENIKKEICINKML-NHENVVKFYGHRREGNIQY   79 (271)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHTC-CCTTBCCEEEEEEETTEEE
T ss_pred             CCcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcch--HHHHHHHHHHHHHhC-CCCCEeeEeeeeccCceeE
Confidence            4678999999999999999999999999999999997654322  235688999999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.....
T Consensus        80 ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl---~~~~~~KL~DFG~a~~~~~~  156 (271)
T d1nvra_          80 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYN  156 (271)
T ss_dssp             EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE---CTTCCEEECCCTTCEECEET
T ss_pred             EEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEE---CCCCCEEEccchhheeeccC
Confidence            999999999999999888889999999999999999999999999999999999999   56789999999999876433


Q ss_pred             C---ceecccCCccccchhhhhc-c-CCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          239 E---QFCEIVGSPYYMAPEVLRR-N-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       239 ~---~~~~~~gt~~y~aPE~l~~-~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      .   .....+||+.|||||++.+ . ++.++|||||||++|+|++|.+||...+.............. ...+++.+|++
T Consensus       157 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~  235 (271)
T d1nvra_         157 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-YLNPWKKIDSA  235 (271)
T ss_dssp             TEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCT-TSTTGGGSCHH
T ss_pred             CccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC-CCCccccCCHH
Confidence            2   2345789999999999974 4 467899999999999999999999776543333333333222 23345678999


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +++||.+||+.||++|||++|+|+||||+..
T Consensus       236 ~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  266 (271)
T d1nvra_         236 PLALLHKILVENPSARITIPDIKKDRWYNKP  266 (271)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             HHHHHHHHcCCChhHCcCHHHHhcCHhhCcC
Confidence            9999999999999999999999999999853

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=5.4e-59  Score=470.22  Aligned_cols=265  Identities=35%  Similarity=0.658  Sum_probs=242.1

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      +.+.++|++++.||+|+||+||+|++..+|+.||+|++.+..   ......+.+|+.+|++| +|||||+++++|++++.
T Consensus        25 ~~~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~  100 (352)
T d1koba_          25 GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQL-HHPKLINLHDAFEDKYE  100 (352)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTC-CSTTBCCEEEEEECSSE
T ss_pred             CCcccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcc---hhHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCE
Confidence            456788999999999999999999999999999999997653   23346788999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      +|||||||+||+|.+++... .++++..++.++.||+.||.|||++||+||||||+|||+.. ...+.+||+|||+|...
T Consensus       101 ~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~-~~~~~vkL~DFGla~~~  179 (352)
T d1koba_         101 MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-KKASSVKIIDFGLATKL  179 (352)
T ss_dssp             EEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTCCCEEECCCTTCEEC
T ss_pred             EEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccc-cCCCeEEEeecccceec
Confidence            99999999999999887654 46999999999999999999999999999999999999953 24679999999999988


Q ss_pred             CCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          236 KPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       236 ~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      ..........||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+..+....+.++...++...++.+|+++
T Consensus       180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  259 (352)
T d1koba_         180 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEA  259 (352)
T ss_dssp             CTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHH
T ss_pred             CCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHH
Confidence            77777777899999999999974 68999999999999999999999999999999999999999988888888999999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCccCCCC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWIKNDNH  346 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~  346 (586)
                      ++||.+||++||.+|||+.|+|+||||+....
T Consensus       260 ~~li~~~L~~dp~~R~s~~eil~Hp~~~~~~~  291 (352)
T d1koba_         260 KDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS  291 (352)
T ss_dssp             HHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCHhhCCCcc
Confidence            99999999999999999999999999987543

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-59  Score=461.18  Aligned_cols=266  Identities=38%  Similarity=0.691  Sum_probs=241.2

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCC---hhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKT---EIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~---~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      ++.++|++++.||+|+||+||+|+++.+|+.||||++.+.....   ....+.+.+|+.+|++| +|||||+++++|+++
T Consensus         7 ~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~   85 (293)
T d1jksa_           7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-QHPNVITLHEVYENK   85 (293)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-CCTTBCCEEEEEECS
T ss_pred             CcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEEC
Confidence            45578999999999999999999999999999999998765432   23467899999999999 899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCC-CCCceEEeeccccc
Q 043828          155 DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGS-ENSQLKAIDFGLSI  233 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~-~~~~vkl~Dfg~a~  233 (586)
                      +.+|||||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++..+ ....+||+|||+|.
T Consensus        86 ~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~  165 (293)
T d1jksa_          86 TDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH  165 (293)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred             CEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhh
Confidence            99999999999999999999888999999999999999999999999999999999999995322 23469999999999


Q ss_pred             ccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCH
Q 043828          234 FFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       234 ~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      ............||+.|+|||++.+ .|+.++|||||||++|+|++|..||.+.+..+....+......++...++.+|+
T Consensus       166 ~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  245 (293)
T d1jksa_         166 KIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSA  245 (293)
T ss_dssp             ECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCH
T ss_pred             hcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCCH
Confidence            8876666677889999999999974 689999999999999999999999999999999999999888877666678999


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .+++||.+||++||.+|||++|+|+||||+..
T Consensus       246 ~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~  277 (293)
T d1jksa_         246 LAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK  277 (293)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC-
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence            99999999999999999999999999999864

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.7e-59  Score=456.98  Aligned_cols=257  Identities=30%  Similarity=0.520  Sum_probs=226.5

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..++|++++.||+|+||+||+|++..+|+.||+|++......   ..+.+.+|+.+|+++ +|||||+++++|.+++.+|
T Consensus        18 p~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~   93 (293)
T d1yhwa1          18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMREN-KNPNIVNYLDSYLVGDELW   93 (293)
T ss_dssp             TTTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHHC-CCTTBCCEEEEEEETTEEE
T ss_pred             cccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccCh---HHHHHHHHHHHHHhC-CCCCEeeEeEEEEECCEEE
Confidence            446899999999999999999999999999999999766433   346789999999999 8999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||||+||+|.+++.. +.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|......
T Consensus        94 ivmEy~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl---~~~~~vkl~DFG~a~~~~~~  169 (293)
T d1yhwa1          94 VVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL---GMDGSVKLTDFGFCAQITPE  169 (293)
T ss_dssp             EEEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCST
T ss_pred             EEEEecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEE---CCCCcEeeccchhheeeccc
Confidence            99999999999987765 579999999999999999999999999999999999999   56789999999999876543


Q ss_pred             -CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          239 -EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       239 -~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                       ......+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+.......+...... ....++.+++.+++
T Consensus       170 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~  248 (293)
T d1yhwa1         170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLSAIFRD  248 (293)
T ss_dssp             TCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC-CCSSGGGSCHHHHH
T ss_pred             cccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCC-CCCCcccCCHHHHH
Confidence             34456789999999999975 6899999999999999999999999998887766666544321 12234578999999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ||.+||++||.+|||++|+|+||||+..
T Consensus       249 li~~~L~~dP~~R~s~~eil~Hp~~~~~  276 (293)
T d1yhwa1         249 FLNRCLDMDVEKRGSAKELLQHQFLKIA  276 (293)
T ss_dssp             HHHHHTCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             HHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence            9999999999999999999999999854

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=5.2e-59  Score=469.97  Aligned_cols=264  Identities=32%  Similarity=0.652  Sum_probs=241.2

Q ss_pred             CCcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           77 GNILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        77 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      +.++++|++++.||+|+||+||+|++..+|+.||||++.+..   ....+.+.+|+.+|++| +|||||++++++++++.
T Consensus        22 ~~il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~---~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~   97 (350)
T d1koaa2          22 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH---ESDKETVRKEIQTMSVL-RHPTLVNLHDAFEDDNE   97 (350)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS---HHHHHHHHHHHHHHHHT-CCTTBCCEEEEEEETTE
T ss_pred             CCCccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc---hhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCE
Confidence            356789999999999999999999999999999999996543   33457789999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      +|||||||+||+|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||+.. +.++.+||+|||+|...
T Consensus        98 ~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~-~~~~~vkL~DFG~a~~~  176 (350)
T d1koaa2          98 MVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT-KRSNELKLIDFGLTAHL  176 (350)
T ss_dssp             EEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-TTSCCEEECCCTTCEEC
T ss_pred             EEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeecc-CCCCeEEEeecchheec
Confidence            9999999999999999854 567999999999999999999999999999999999999953 24578999999999988


Q ss_pred             CCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          236 KPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       236 ~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      ..........||+.|||||++.+ .|+.++|||||||++|+|++|..||.+.+..++...+......++...++.+|+++
T Consensus       177 ~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~  256 (350)
T d1koaa2         177 DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDG  256 (350)
T ss_dssp             CTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHH
T ss_pred             ccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHH
Confidence            77777777899999999999974 68999999999999999999999999999999999999998888877778899999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                      ++||.+||..||.+|||++|+|+||||+...
T Consensus       257 ~~li~~~L~~dP~~R~t~~eil~hp~~~~~~  287 (350)
T d1koaa2         257 KDFIRKLLLADPNTRMTIHQALEHPWLTPGN  287 (350)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHHHSTTTSCTT
T ss_pred             HHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence            9999999999999999999999999998653

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-59  Score=459.05  Aligned_cols=256  Identities=32%  Similarity=0.565  Sum_probs=230.4

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+|+++ +|||||++++++++++.+|||
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~iv   86 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHPFFVKLYFTFQDDEKLYFG   86 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-CSTTBCCEEEEEECSSEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHc-CCCCeeEEEEEEEECCEEEEE
Confidence            6899999999999999999999999999999999876554444567899999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC--
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG--  238 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~--  238 (586)
                      ||||+||+|.+++...+.+++..++.++.|++.||.|||++||+||||||+|||+   +.++.+||+|||+|+.....  
T Consensus        87 mEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll---~~~~~vkl~DFG~a~~~~~~~~  163 (288)
T d1uu3a_          87 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESK  163 (288)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECC----
T ss_pred             EEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCcccccc---CCCceEEecccccceecccCCc
Confidence            9999999999999988999999999999999999999999999999999999999   67789999999999876532  


Q ss_pred             -CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          239 -EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       239 -~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                       ......+||+.|+|||++.+ .|+.++|||||||++|+|++|..||.+.+..++...+.++.+.++    ..+++++++
T Consensus       164 ~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~  239 (288)
T d1uu3a_         164 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD  239 (288)
T ss_dssp             ------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCC----TTCCHHHHH
T ss_pred             ccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCC----ccCCHHHHH
Confidence             23345689999999999974 689999999999999999999999999999999999998877664    368999999


Q ss_pred             HHHHccCCCCCCCCCHHH------HhcCCCccCC
Q 043828          317 LVKNMLDPNPYNRLTLEE------VLENPWIKND  344 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~e------il~hp~~~~~  344 (586)
                      ||.+||++||.+|||++|      +++||||+..
T Consensus       240 li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i  273 (288)
T d1uu3a_         240 LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV  273 (288)
T ss_dssp             HHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred             HHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCC
Confidence            999999999999999988      5889999864

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=2.2e-58  Score=450.61  Aligned_cols=262  Identities=35%  Similarity=0.669  Sum_probs=239.6

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCCh------hcHHHHHHHHHHHHhCCCCCCeeEEEEEEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE------IDIDDVRREVEIMRHLPKHPNIVTYKEAYE  152 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~------~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~  152 (586)
                      +.++|++.+.||+|+||+||+|++..+|+.||||++.+......      ...+.+.+|+.+|++|..|||||++++++.
T Consensus         1 f~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~   80 (277)
T d1phka_           1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE   80 (277)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             CcccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc
Confidence            35799999999999999999999999999999999987654321      123468899999999966999999999999


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          153 DKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       153 ~~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                      +++.+|||||||+||+|.+++..++.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++
T Consensus        81 ~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill---~~~~~~kl~DFG~a  157 (277)
T d1phka_          81 TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFS  157 (277)
T ss_dssp             CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTCCEEECCCTTC
T ss_pred             cCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEE---cCCCCeEEccchhe
Confidence            999999999999999999999998999999999999999999999999999999999999999   67889999999999


Q ss_pred             cccCCCCceecccCCccccchhhhhc-------cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCC
Q 043828          233 IFFKPGEQFCEIVGSPYYMAPEVLRR-------NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERD  305 (586)
Q Consensus       233 ~~~~~~~~~~~~~gt~~y~aPE~l~~-------~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~  305 (586)
                      ............+||+.|+|||++.+       .++.++||||+||++|+|++|..||.+.+.......+..+...++.+
T Consensus       158 ~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~  237 (277)
T d1phka_         158 CQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSP  237 (277)
T ss_dssp             EECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT
T ss_pred             eEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCc
Confidence            98776666667889999999999852       36889999999999999999999999999999999999998888877


Q ss_pred             CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          306 PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       306 ~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                      .++.+|+++++||.+||++||++|||++|+|+||||+.
T Consensus       238 ~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         238 EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             ccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence            77899999999999999999999999999999999985

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-58  Score=461.61  Aligned_cols=257  Identities=32%  Similarity=0.577  Sum_probs=236.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +++|++++.||+|+||+||+|+++.+|+.||+|++.+.........+.+.+|+.+|+++ +|||||+++++|++++.+|+
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-~hp~Iv~l~~~~~~~~~~~i   82 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCF   82 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CCTTBCCEEEEEECSSEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhC-CCCCEEEEEeeecccccccc
Confidence            46899999999999999999999999999999999877554444567889999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC-C
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP-G  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~-~  238 (586)
                      |||||+||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+.... .
T Consensus        83 v~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl---~~~g~vkl~DFG~a~~~~~~~  159 (337)
T d1o6la_          83 VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDG  159 (337)
T ss_dssp             EEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCSCCTT
T ss_pred             ceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEe---cCCCCEEEeecccccccccCC
Confidence            99999999999999999999999999999999999999999999999999999999   6778999999999987543 3


Q ss_pred             CceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHH
Q 043828          239 EQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKEL  317 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  317 (586)
                      ......+||+.|+|||++. ..|+.++|||||||++|+|++|.+||.+.+..++...+..+.+.++    ..+|+++++|
T Consensus       160 ~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~dl  235 (337)
T d1o6la_         160 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSPEAKSL  235 (337)
T ss_dssp             CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHH
T ss_pred             cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCC----ccCCHHHHHH
Confidence            4455688999999999996 5699999999999999999999999999999999999999887665    3689999999


Q ss_pred             HHHccCCCCCCCC-----CHHHHhcCCCccCC
Q 043828          318 VKNMLDPNPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       318 i~~~L~~dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      |.+||++||.+||     +++|+++||||+..
T Consensus       236 i~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i  267 (337)
T d1o6la_         236 LAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             HHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHhhccCCchhhcccccccHHHHHcCcccccC
Confidence            9999999999999     49999999999864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-58  Score=445.49  Aligned_cols=253  Identities=24%  Similarity=0.407  Sum_probs=219.3

Q ss_pred             eeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe----CCeEE
Q 043828           83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED----KDAIY  158 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~----~~~~~  158 (586)
                      |++.++||+|+||+||+|++..+++.||+|++...... ....+.+.+|+++|+++ +|||||++++++++    ...+|
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~-~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~~~~~   88 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGL-QHPNIVRFYDSWESTVKGKKCIV   88 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEEESSSCEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC-HHHHHHHHHHHHHHHhC-CCCCeeeEEEEEeeccccCCEEE
Confidence            47788999999999999999999999999999876543 33457789999999999 89999999999975    45689


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENG--VMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      ||||||+||+|.+++.....+++..+..++.||+.||.|||+++  |+||||||+|||++  +.++.+||+|||+|+...
T Consensus        89 ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~--~~~~~~Kl~DFGla~~~~  166 (270)
T d1t4ha_          89 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKIGDLGLATLKR  166 (270)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES--STTSCEEECCTTGGGGCC
T ss_pred             EEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceee--CCCCCEEEeecCcceecc
Confidence            99999999999999998889999999999999999999999998  99999999999994  246789999999998654


Q ss_pred             CCCceecccCCccccchhhhhccCCCcchHHHHHHHHHHHhhCCCCCCCCC-HHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          237 PGEQFCEIVGSPYYMAPEVLRRNYGPEIDVWSAGVIIYILLCGVPPFWAET-EEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      . ......+||+.|+|||++.+.|+.++|||||||++|+|++|..||.+.. ...+...+..+...  ......++++++
T Consensus       167 ~-~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~  243 (270)
T d1t4ha_         167 A-SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP--ASFDKVAIPEVK  243 (270)
T ss_dssp             T-TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC--GGGGGCCCHHHH
T ss_pred             C-CccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCC--cccCccCCHHHH
Confidence            3 3345678999999999999899999999999999999999999997654 44555555544322  122345789999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcCCCcc
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLENPWIK  342 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~hp~~~  342 (586)
                      +||.+||++||++|||++|+|+||||+
T Consensus       244 ~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         244 EIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             HHHHHHccCCHhHCcCHHHHhCCcccC
Confidence            999999999999999999999999996

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-58  Score=453.81  Aligned_cols=256  Identities=29%  Similarity=0.469  Sum_probs=225.3

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      +.|++++.||+|+||+||+|++..+|+.||+|++.+..   ....+.+.+|+.+|++| +|||||++++++.+++.+|||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~E~~il~~l-~HpnIv~l~~~~~~~~~~~lv   87 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLWIL   87 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSS---SGGGGGTHHHHHHHHHC-CCTTBCCEEEEEEETTEEEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCC---HHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCeEEEE
Confidence            57999999999999999999999999999999997653   23346788999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC-
Q 043828          161 MELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-  238 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-  238 (586)
                      ||||+||+|.+++.+ .+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|...... 
T Consensus        88 mEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll---~~~~~~Kl~DFG~a~~~~~~~  164 (288)
T d2jfla1          88 IEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILF---TLDGDIKLADFGVSAKNTRTI  164 (288)
T ss_dssp             EECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECHHHH
T ss_pred             EecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeE---CCCCCEEEEechhhhccCCCc
Confidence            999999999998765 5679999999999999999999999999999999999999   56789999999999764322 


Q ss_pred             CceecccCCccccchhhhh------ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCH
Q 043828          239 EQFCEIVGSPYYMAPEVLR------RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSK  312 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~------~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  312 (586)
                      ......+||+.|+|||++.      ..|+.++|||||||++|+|++|.+||.+.+..+....+..+..... ...+.+|+
T Consensus       165 ~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~s~  243 (288)
T d2jfla1         165 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL-AQPSRWSS  243 (288)
T ss_dssp             HHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCC-SSGGGSCH
T ss_pred             ccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC-CccccCCH
Confidence            2234568999999999983      3588999999999999999999999999888888888887754332 22357899


Q ss_pred             HHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          313 EAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       313 ~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ++++||.+||++||.+|||++|+|+||||+..
T Consensus       244 ~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~  275 (288)
T d2jfla1         244 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD  275 (288)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCC
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence            99999999999999999999999999999753

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.5e-58  Score=454.76  Aligned_cols=255  Identities=28%  Similarity=0.440  Sum_probs=228.8

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      +.|++++.||+|+||+||+|++..+|+.||||++.+.........+.+.+|+.+|++| +|||||++++++.+++.+|||
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~~iv   93 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWLV   93 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEECCEEEEE
Confidence            4699999999999999999999999999999999877655555567789999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCc
Q 043828          161 MELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQ  240 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~  240 (586)
                      ||||.||+|..++..+.++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|.....   
T Consensus        94 ~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl---~~~~~~Kl~DFG~a~~~~~---  167 (309)
T d1u5ra_          94 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAP---  167 (309)
T ss_dssp             EECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEE---ETTTEEEECCCTTCBSSSS---
T ss_pred             EEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEE---CCCCCEEEeecccccccCC---
Confidence            9999999998877888899999999999999999999999999999999999999   5678999999999987543   


Q ss_pred             eecccCCccccchhhhh----ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          241 FCEIVGSPYYMAPEVLR----RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       241 ~~~~~gt~~y~aPE~l~----~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                      ....+||+.|||||++.    +.|+.++|||||||++|+|++|..||.+.+..+....+..+......  ...+|+.+++
T Consensus       168 ~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~~s~~~~~  245 (309)
T d1u5ra_         168 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQ--SGHWSEYFRN  245 (309)
T ss_dssp             BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCS--CTTSCHHHHH
T ss_pred             CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC--CCCCCHHHHH
Confidence            34568999999999985    35899999999999999999999999999888888877776554332  3468999999


Q ss_pred             HHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          317 LVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ||.+||+.||.+|||++|+|+||||.+.
T Consensus       246 li~~~L~~dP~~Rpt~~ell~Hp~~~~~  273 (309)
T d1u5ra_         246 FVDSCLQKIPQDRPTSEVLLKHRFVLRE  273 (309)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred             HHHHHCcCChhHCcCHHHHHhCHHhcCC
Confidence            9999999999999999999999999864

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-58  Score=460.77  Aligned_cols=261  Identities=31%  Similarity=0.636  Sum_probs=239.2

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .+.++|++++.||+|+||+||+|+++.+|+.||+|++.+..    .....+.+|+.+|+.+ +|||||+++++|++++.+
T Consensus         2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~----~~~~~~~~Ei~il~~l-~HpnIv~~~~~~~~~~~~   76 (321)
T d1tkia_           2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIA-RHRNILHLHESFESMEEL   76 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHS-CCTTBCCEEEEEEETTEE
T ss_pred             CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc----ccHHHHHHHHHHHHhC-CCCCCCeEEEEEEECCEE
Confidence            46789999999999999999999999999999999997653    2235688999999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVNKG-HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      |||||||+||+|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++. +....+||+|||++....
T Consensus        77 ~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~-~~~~~ikl~DFG~~~~~~  155 (321)
T d1tkia_          77 VMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT-RRSSTIKIIEFGQARQLK  155 (321)
T ss_dssp             EEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-SSCCCEEECCCTTCEECC
T ss_pred             EEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecC-CCceEEEEcccchhhccc
Confidence            99999999999999998655 7999999999999999999999999999999999999953 245689999999999887


Q ss_pred             CCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          237 PGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      .........||+.|+|||++. ..|+.++|||||||++|+|++|.+||.+.+..++...+.++.+.++...++.+|++++
T Consensus       156 ~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~  235 (321)
T d1tkia_         156 PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAM  235 (321)
T ss_dssp             TTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHH
T ss_pred             cCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHH
Confidence            766677788999999999986 4689999999999999999999999999999999999999998888777788999999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +||.+||.+||.+|||++|+|+||||+..
T Consensus       236 ~li~~~L~~dp~~R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         236 DFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             HHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             HHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence            99999999999999999999999999754

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-57  Score=444.15  Aligned_cols=253  Identities=34%  Similarity=0.587  Sum_probs=214.1

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe--CCeEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED--KDAIY  158 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~--~~~~~  158 (586)
                      ++|++++.||+|+||+||+|+++.+|+.||+|++...... ....+.+.+|+.+|+++ +|||||++++++.+  ++.+|
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~~~   81 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLREL-KHPNIVRYYDRIIDRTNTTLY   81 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSC-HHHHHHHHHHHHHTTSC-CCTTBCCEEEEEEC----CEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCC-HHHHHHHHHHHHHHHHC-CCCCEeeEEEEEEeCCCCEEE
Confidence            6899999999999999999999999999999999876543 34467789999999999 89999999999864  46689


Q ss_pred             EEEeccCCCChHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHHcC-----ceeccCCCCceEeecCCCCCceEEeec
Q 043828          159 LVMELCEGGELFDRIVN----KGHYTERAAAAVGKTILRIVKVCHENG-----VMHRDLKPENFLFADGSENSQLKAIDF  229 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~-----ivHrDlkp~Nill~~~~~~~~vkl~Df  229 (586)
                      ||||||+||+|.+++..    ...+++..++.++.||+.||.|||++|     |+||||||+|||+   +.++.+||+||
T Consensus        82 ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll---~~~~~vkl~DF  158 (269)
T d2java1          82 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL---DGKQNVKLGDF  158 (269)
T ss_dssp             EEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEE---CTTSCEEECCH
T ss_pred             EEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCc---CCCCcEEEeec
Confidence            99999999999998863    467999999999999999999999976     9999999999999   56789999999


Q ss_pred             ccccccCCCC-ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCC
Q 043828          230 GLSIFFKPGE-QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPW  307 (586)
Q Consensus       230 g~a~~~~~~~-~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  307 (586)
                      |+|+...... .....+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+..++...+..+....   ..
T Consensus       159 G~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~---~~  235 (269)
T d2java1         159 GLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---IP  235 (269)
T ss_dssp             HHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC---CC
T ss_pred             cceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC---CC
Confidence            9998865433 3345789999999999964 68999999999999999999999999999999988888876542   22


Q ss_pred             CCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCc
Q 043828          308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWI  341 (586)
Q Consensus       308 ~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~  341 (586)
                      ..+|+++++||.+||+.||.+|||++|+|+|||+
T Consensus       236 ~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         236 YRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             cccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            4689999999999999999999999999999996

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.1e-57  Score=452.32  Aligned_cols=255  Identities=28%  Similarity=0.557  Sum_probs=233.9

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+|+.+ +|||||++++++.+++.+|+
T Consensus         3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~i   81 (316)
T d1fota_           3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-THPFIIRMWGTFQDAQQIFM   81 (316)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-CBTTBCCEEEEEECSSEEEE
T ss_pred             hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhc-cCcChhheeeeEeeCCeeee
Confidence            46899999999999999999999999999999999876544444567899999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||||+||+|..++.....+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+..... 
T Consensus        82 vmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl---~~~g~vkL~DFG~a~~~~~~-  157 (316)
T d1fota_          82 IMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFAKYVPDV-  157 (316)
T ss_dssp             EECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE---CTTSCEEECCCSSCEECSSC-
T ss_pred             EeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeE---cCCCCEEEecCccceEeccc-
Confidence            99999999999999999999999999999999999999999999999999999999   67889999999999876533 


Q ss_pred             ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHH
Q 043828          240 QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV  318 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  318 (586)
                       ....+||+.|+|||++.+ .|+.++|||||||++|+|++|..||.+.+..++...+.++...++    +.++++++++|
T Consensus       158 -~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li  232 (316)
T d1fota_         158 -TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLL  232 (316)
T ss_dssp             -BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHH
T ss_pred             -cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC----CCCCHHHHHHH
Confidence             346789999999999975 589999999999999999999999999999999999998876554    36899999999


Q ss_pred             HHccCCCCCCCC-----CHHHHhcCCCccCC
Q 043828          319 KNMLDPNPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       319 ~~~L~~dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      .+||.+||.+|+     |++++|+||||+..
T Consensus       233 ~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i  263 (316)
T d1fota_         233 SRLITRDLSQRLGNLQNGTEDVKNHPWFKEV  263 (316)
T ss_dssp             HHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             HHHhhhCHHhccccchhhHHHHHcCcccccC
Confidence            999999999996     99999999999874

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.1e-56  Score=453.36  Aligned_cols=255  Identities=29%  Similarity=0.564  Sum_probs=233.7

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+.+|+.+|+.+ +|||||++++++.+...+|+
T Consensus        40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~~  118 (350)
T d1rdqe_          40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVKLEFSFKDNSNLYM  118 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEE
T ss_pred             ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHc-CCCcEeeccccccccccccc
Confidence            57999999999999999999999999999999999876554445567899999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      ||||+.||+|..++...+.+++..++.++.||+.||.|||++|||||||||+|||+   +.++.+||+|||+|+..... 
T Consensus       119 v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl---~~~g~ikL~DFG~a~~~~~~-  194 (350)
T d1rdqe_         119 VMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGR-  194 (350)
T ss_dssp             EEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTSCEEECCCTTCEECSSC-
T ss_pred             ccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHccc---CCCCCEEeeeceeeeecccc-
Confidence            99999999999999988899999999999999999999999999999999999999   56789999999999876533 


Q ss_pred             ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHH
Q 043828          240 QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV  318 (586)
Q Consensus       240 ~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  318 (586)
                       ....+||+.|||||++.+ .|+.++|||||||++|+|++|.+||.+.+...+...+..+...++    ..+++++.+||
T Consensus       195 -~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li  269 (350)
T d1rdqe_         195 -TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLL  269 (350)
T ss_dssp             -BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTCCHHHHHHH
T ss_pred             -cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCC----ccCCHHHHHHH
Confidence             345789999999999974 689999999999999999999999999999999999988876554    46899999999


Q ss_pred             HHccCCCCCCCC-----CHHHHhcCCCccCC
Q 043828          319 KNMLDPNPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       319 ~~~L~~dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      .+||.+||.+|+     |++++++||||+..
T Consensus       270 ~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~  300 (350)
T d1rdqe_         270 RNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             HHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             HHHhhhCHHhccccccccHHHHHcCccccCC
Confidence            999999999995     99999999999865

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-58  Score=458.95  Aligned_cols=263  Identities=37%  Similarity=0.669  Sum_probs=225.9

Q ss_pred             CCcccCeeecc-eeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe--
Q 043828           77 GNILDKYTFGK-ELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED--  153 (586)
Q Consensus        77 ~~~~~~y~~~~-~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~--  153 (586)
                      ..+.++|.+.+ .||+|+||+||+|++..+|+.||||++...        ..+.+|+.++.++.+|||||+++++|++  
T Consensus         7 ~~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~--------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~   78 (335)
T d2ozaa1           7 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLY   78 (335)
T ss_dssp             SCGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE
T ss_pred             CCcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc--------HHHHHHHHHHHHhcCCCCCCeEEEEEeecc
Confidence            35678999875 599999999999999999999999998643        4678899998766689999999999976  


Q ss_pred             --CCeEEEEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeec
Q 043828          154 --KDAIYLVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDF  229 (586)
Q Consensus       154 --~~~~~iv~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Df  229 (586)
                        +..+|||||||+||+|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.....+.+||+||
T Consensus        79 ~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DF  158 (335)
T d2ozaa1          79 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDF  158 (335)
T ss_dssp             TTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCC
T ss_pred             cCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccccccccccc
Confidence              46799999999999999999864  46999999999999999999999999999999999999976556788999999


Q ss_pred             ccccccCCCCceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHH----HHHhCccCCCC
Q 043828          230 GLSIFFKPGEQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAH----AIIRGKIDFER  304 (586)
Q Consensus       230 g~a~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~----~i~~~~~~~~~  304 (586)
                      |+|+...........+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+......    .+..+...++.
T Consensus       159 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~  238 (335)
T d2ozaa1         159 GFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN  238 (335)
T ss_dssp             TTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCT
T ss_pred             ceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCC
Confidence            99998776666677899999999999874 69999999999999999999999998765443333    33445555666


Q ss_pred             CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCCCC
Q 043828          305 DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDNHA  347 (586)
Q Consensus       305 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~~~  347 (586)
                      +.++.+|+++++||.+||++||++|||+.|+|+||||+.....
T Consensus       239 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~  281 (335)
T d2ozaa1         239 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKV  281 (335)
T ss_dssp             THHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTTSS
T ss_pred             cccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCCCC
Confidence            5566789999999999999999999999999999999765443

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-57  Score=453.77  Aligned_cols=257  Identities=26%  Similarity=0.384  Sum_probs=215.8

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++++.||+|+||+||+|++..+|+.||+|++.+..  .......+.+|+.+|+++ +|||||+++++|.+++.+||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~Ei~il~~l-~HpnIv~l~~~~~~~~~~~i   81 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISI   81 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC--CTTHHHHHHHHGGGGGGC-CCTTBCCEEEEEECSSEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh--CHHHHHHHHHHHHHHHhC-CCCCCCcEEEEEEECCEEEE
Confidence            468999999999999999999999999999999997653  233456889999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      |||||+||+|.+++.+.+.+++..++.++.||+.||.|||+ +||+||||||+|||+   +.++.+||+|||+|......
T Consensus        82 VmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl---~~~~~vkl~DFGla~~~~~~  158 (322)
T d1s9ja_          82 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV---NSRGEIKLCDFGVSGQLIDS  158 (322)
T ss_dssp             EEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE---CTTCCEEECCCCCCHHHHHH
T ss_pred             EEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeE---CCCCCEEEeeCCCccccCCC
Confidence            99999999999999988899999999999999999999997 599999999999999   56789999999999876432


Q ss_pred             CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHH---hCc---------------
Q 043828          239 EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAII---RGK---------------  299 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~---~~~---------------  299 (586)
                       ...+.+||+.|+|||++.+ .|+.++||||+||++|+|++|+.||.+.+.........   .+.               
T Consensus       159 -~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (322)
T d1s9ja_         159 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL  237 (322)
T ss_dssp             -TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC----------------------
T ss_pred             -ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccc
Confidence             2345789999999999975 79999999999999999999999997654322110000   000               


Q ss_pred             ----------------------cCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          300 ----------------------IDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       300 ----------------------~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                                            ...+..+...+|.++++||.+||..||.+|||++|+|+||||++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~  303 (322)
T d1s9ja_         238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  303 (322)
T ss_dssp             --------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             cccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCc
Confidence                                  00011111246889999999999999999999999999999985

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-56  Score=446.64  Aligned_cols=257  Identities=26%  Similarity=0.479  Sum_probs=230.4

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHH-hCCCCCCeeEEEEEEEeCCeEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMR-HLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~-~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      .++|++++.||+|+||+||+|+++.+|+.||||++.+.........+.+..|+.++. .+ +|||||++++++.+++.+|
T Consensus         1 iddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~-~hp~Iv~~~~~~~~~~~~y   79 (320)
T d1xjda_           1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW-EHPFLTHMFCTFQTKENLF   79 (320)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHT-TCTTBCCEEEEEECSSEEE
T ss_pred             CCCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhC-CCCcEEEEEEEEccCCcee
Confidence            368999999999999999999999999999999998765433444567777887776 46 9999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          159 LVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      ||||||+||+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+   +..+.+||+|||+|......
T Consensus        80 ivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~---~~~~~~kl~DFG~a~~~~~~  156 (320)
T d1xjda_          80 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLG  156 (320)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE---CTTSCEEECCCTTCBCCCCT
T ss_pred             EEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceee---cCCCceeccccchhhhcccc
Confidence            999999999999999998999999999999999999999999999999999999999   67789999999999866433


Q ss_pred             -CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHH
Q 043828          239 -EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKE  316 (586)
Q Consensus       239 -~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  316 (586)
                       ......+||+.|+|||++.+ .|+.++|||||||++|+|++|..||.+.+..++...+..+.+.++    ..+|+.+++
T Consensus       157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~d  232 (320)
T d1xjda_         157 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP----RWLEKEAKD  232 (320)
T ss_dssp             TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHH
T ss_pred             cccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----ccCCHHHHH
Confidence             33445789999999999974 799999999999999999999999999999999999988876554    358999999


Q ss_pred             HHHHccCCCCCCCCCHH-HHhcCCCccCC
Q 043828          317 LVKNMLDPNPYNRLTLE-EVLENPWIKND  344 (586)
Q Consensus       317 li~~~L~~dp~~Rps~~-eil~hp~~~~~  344 (586)
                      ||.+||.+||.+|||+. ++++||||+..
T Consensus       233 li~~~L~~dP~~R~s~~~~l~~hpff~~~  261 (320)
T d1xjda_         233 LLVKLFVREPEKRLGVRGDIRQHPLFREI  261 (320)
T ss_dssp             HHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             HHHHhcccCCCCCcCHHHHHHhCchhccC
Confidence            99999999999999995 89999999864

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=4.1e-56  Score=451.59  Aligned_cols=259  Identities=27%  Similarity=0.447  Sum_probs=220.3

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHH---HHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRRE---VEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~E---i~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      +++|++++.||+|+||+||+|++..+|+.||+|++.+...........+.+|   +.+++.+ +|||||+++++|++.+.
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~-~hpnIv~l~~~~~~~~~   81 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG-DCPFIVCMSYAFHTPDK   81 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSS-CCTTBCCEEEEEECSSE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcC-CCCcEEEEEEEEEECCE
Confidence            4689999999999999999999999999999999976554333233334444   6667777 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|||||||+||+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||+   +..+.+||+|||+|+...
T Consensus        82 ~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl---~~~g~iKl~DFGla~~~~  158 (364)
T d1omwa3          82 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFS  158 (364)
T ss_dssp             EEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CSSSCEEECCCTTCEECS
T ss_pred             EEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEE---cCCCcEEEeeeceeeecC
Confidence            99999999999999999998899999999999999999999999999999999999999   677899999999998765


Q ss_pred             CCCceecccCCccccchhhhh-c-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          237 PGEQFCEIVGSPYYMAPEVLR-R-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~-~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      .. .....+||+.|+|||++. + .|+.++|||||||++|+|++|..||.+.+...... +.+.....+...+..+|+++
T Consensus       159 ~~-~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~  236 (364)
T d1omwa3         159 KK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTMAVELPDSFSPEL  236 (364)
T ss_dssp             SS-CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHH-HHHHSSSCCCCCCSSSCHHH
T ss_pred             CC-cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhcccCCCCCCCCCCHHH
Confidence            43 344568999999999985 3 58999999999999999999999998755433222 22223333333445799999


Q ss_pred             HHHHHHccCCCCCCCCC-----HHHHhcCCCccCC
Q 043828          315 KELVKNMLDPNPYNRLT-----LEEVLENPWIKND  344 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps-----~~eil~hp~~~~~  344 (586)
                      ++||.+||.+||.+|||     |+|+++||||++.
T Consensus       237 ~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i  271 (364)
T d1omwa3         237 RSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL  271 (364)
T ss_dssp             HHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred             HHHHHHHcccCHHHhCCCcccCHHHHHcCccccCC
Confidence            99999999999999999     8999999999874

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-55  Score=435.08  Aligned_cols=257  Identities=27%  Similarity=0.365  Sum_probs=215.6

Q ss_pred             ecceeccCCceEEEEEEEccCCcEEEEEEeeccccCCh--hcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEe
Q 043828           85 FGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTE--IDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVME  162 (586)
Q Consensus        85 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~--~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E  162 (586)
                      .+++||+|+||+||+|++..+|+.||||++........  .....+.+|+.+|+++ +|||||++++++.+++.+|||||
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~~~~~~~~~ivmE   80 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-SHPNIIGLLDAFGHKSNISLVFD   80 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-CCTTBCCEEEEECCTTCCEEEEE
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhC-CCCCEeEEEeeeccCCceeehhh
Confidence            46789999999999999999999999999976543221  1234688999999999 89999999999999999999999


Q ss_pred             ccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC-Cce
Q 043828          163 LCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-EQF  241 (586)
Q Consensus       163 ~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-~~~  241 (586)
                      ||.++++..+......+++..++.++.||+.||.|||++||+||||||+|||+   +..+.+||+|||+|...... ...
T Consensus        81 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli---~~~~~~KL~DFG~a~~~~~~~~~~  157 (299)
T d1ua2a_          81 FMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAY  157 (299)
T ss_dssp             CCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCCGGGSTTTSCCCCC
T ss_pred             hhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEe---cCCCccccccCccccccCCCcccc
Confidence            99998887766667789999999999999999999999999999999999999   67789999999999876433 334


Q ss_pred             ecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCC-------------
Q 043828          242 CEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP-------------  306 (586)
Q Consensus       242 ~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~-------------  306 (586)
                      ...+||+.|+|||++.  ..|+.++|||||||++|+|++|.+||.+.+..+.+..+.+.........             
T Consensus       158 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~  237 (299)
T d1ua2a_         158 THQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF  237 (299)
T ss_dssp             CCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCC
T ss_pred             cceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhh
Confidence            4568999999999985  3589999999999999999999999999998888777764322111111             


Q ss_pred             -----------CCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          307 -----------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       307 -----------~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                                 ++.+++++++||.+||+.||++|||++|+|+||||+...
T Consensus       238 ~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p  287 (299)
T d1ua2a_         238 KSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRP  287 (299)
T ss_dssp             CCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSS
T ss_pred             ccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCC
Confidence                       235688999999999999999999999999999998653

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-54  Score=425.77  Aligned_cols=260  Identities=25%  Similarity=0.404  Sum_probs=216.7

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +++|++++.||+|+||+||+|++..+|+.||+|++...... ....+.+.+|+.+|+++ +|||||++++++.+++.+|+
T Consensus         1 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~Ei~il~~l-~Hp~Iv~~~~~~~~~~~~~i   78 (298)
T d1gz8a_           1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYL   78 (298)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHTTC-CCTTBCCEEEEEEETTEEEE
T ss_pred             CCCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcC-hHHHHHHHHHHHHHHhC-CCCcEEEeccccccccceeE
Confidence            46899999999999999999999999999999999765432 22346888999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      |||||.++.+...... ...+++..++.++.||+.||.|||++|||||||||+|||+   +.++.+||+|||+|......
T Consensus        79 v~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~---~~~~~~kl~DFG~a~~~~~~  155 (298)
T d1gz8a_          79 VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVP  155 (298)
T ss_dssp             EEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECSTTHHHHHCCC
T ss_pred             EEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheee---cccCcceeccCCcceeccCC
Confidence            9999976544333233 4569999999999999999999999999999999999999   56789999999999876543


Q ss_pred             -CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCC---------
Q 043828          239 -EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDP---------  306 (586)
Q Consensus       239 -~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~---------  306 (586)
                       .......||+.|+|||++..  .++.++||||+||++|+|++|..||.+.+.......+.+.........         
T Consensus       156 ~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  235 (298)
T d1gz8a_         156 VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD  235 (298)
T ss_dssp             SBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred             cccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccc
Confidence             33445689999999998753  468899999999999999999999999888777766654322211111         


Q ss_pred             ----------------CCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          307 ----------------WPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       307 ----------------~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                      ++.+++++++||.+||.+||++|||++|+|+||||++.
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~  289 (298)
T d1gz8a_         236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV  289 (298)
T ss_dssp             CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             cccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccC
Confidence                            23567899999999999999999999999999999864

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-54  Score=424.26  Aligned_cols=253  Identities=30%  Similarity=0.557  Sum_probs=216.9

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChh---cHHHHHHHHHHHHhCC-CCCCeeEEEEEEEeC
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEI---DIDDVRREVEIMRHLP-KHPNIVTYKEAYEDK  154 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~---~~~~~~~Ei~~l~~l~-~hpnIv~l~~~~~~~  154 (586)
                      +.++|++++.||+|+||+||+|++..+|+.||||++.+.......   ....+.+|+.+|+++. .|||||+++++++++
T Consensus         2 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~   81 (273)
T d1xwsa_           2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP   81 (273)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred             CCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeC
Confidence            356899999999999999999999999999999999876543321   1234668999999984 399999999999999


Q ss_pred             CeEEEEEeccCC-CChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          155 DAIYLVMELCEG-GELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       155 ~~~~iv~E~~~g-g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                      +.+|+||||+.+ +++.+++..+..+++..++.++.||+.||.|||++||+||||||+|||++  ...+.+||+|||+|.
T Consensus        82 ~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~--~~~~~vkl~DFG~a~  159 (273)
T d1xwsa_          82 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID--LNRGELKLIDFGSGA  159 (273)
T ss_dssp             SEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEEEECCCTTCE
T ss_pred             CeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEe--cCCCeEEECccccce
Confidence            999999999976 67888888888999999999999999999999999999999999999995  235789999999998


Q ss_pred             ccCCCCceecccCCccccchhhhhc-c-CCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCC
Q 043828          234 FFKPGEQFCEIVGSPYYMAPEVLRR-N-YGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS  311 (586)
Q Consensus       234 ~~~~~~~~~~~~gt~~y~aPE~l~~-~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  311 (586)
                      .... .......||+.|+|||++.+ . ++.++|||||||++|+|++|..||...      ..+.++...++    +.+|
T Consensus       160 ~~~~-~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~------~~i~~~~~~~~----~~~s  228 (273)
T d1xwsa_         160 LLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR----QRVS  228 (273)
T ss_dssp             ECCS-SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH------HHHHHCCCCCS----SCCC
T ss_pred             eccc-ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc------hHHhhcccCCC----CCCC
Confidence            6543 33456789999999999864 3 467799999999999999999999753      23455555443    4689


Q ss_pred             HHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          312 KEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       312 ~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      +++++||.+||++||++|||++|+|+||||++.
T Consensus       229 ~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~  261 (273)
T d1xwsa_         229 SECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV  261 (273)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence            999999999999999999999999999999864

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.5e-54  Score=422.76  Aligned_cols=260  Identities=27%  Similarity=0.432  Sum_probs=222.7

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC--
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD--  155 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~--  155 (586)
                      .+.++|++.+.||+|+||+||+|++..+|+.||+|++.+...........+.+|+.+|+.+ +|||||++++++...+  
T Consensus         4 ~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~-~hpniv~~~~~~~~~~~~   82 (277)
T d1o6ya_           4 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPA   82 (277)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEEEECSS
T ss_pred             CccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhc-CCCCCCcccceeeeccCC
Confidence            3557899999999999999999999999999999999887666665667899999999999 9999999999998654  


Q ss_pred             --eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          156 --AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       156 --~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                        .+|||||||+|++|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +..+.++|+|||.+.
T Consensus        83 ~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll---~~~~~~~l~d~~~~~  159 (277)
T d1o6ya_          83 GPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIAR  159 (277)
T ss_dssp             SEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---ETTSCEEECCCTTCE
T ss_pred             CceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCccccc---Cccccceeehhhhhh
Confidence              489999999999999999888899999999999999999999999999999999999999   567889999999887


Q ss_pred             ccCCC----CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCC
Q 043828          234 FFKPG----EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWP  308 (586)
Q Consensus       234 ~~~~~----~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  308 (586)
                      .....    ......+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+..+....+.+....++...++
T Consensus       160 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~  239 (277)
T d1o6ya_         160 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHE  239 (277)
T ss_dssp             ECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSS
T ss_pred             hhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhcc
Confidence            54322    23345689999999999975 68999999999999999999999999999988888888887776666677


Q ss_pred             CCCHHHHHHHHHccCCCCCCCC-CHHHHhcCCCcc
Q 043828          309 KVSKEAKELVKNMLDPNPYNRL-TLEEVLENPWIK  342 (586)
Q Consensus       309 ~~~~~~~~li~~~L~~dp~~Rp-s~~eil~hp~~~  342 (586)
                      .+|+.+.+||.+||++||.+|| |++++ .|+|.+
T Consensus       240 ~~s~~l~~li~~~L~~dp~~R~~sa~~l-~~~l~r  273 (277)
T d1o6ya_         240 GLSADLDAVVLKALAKNPENRYQTAAEM-RADLVR  273 (277)
T ss_dssp             SCCHHHHHHHHHHTCSSGGGSCSSHHHH-HHHHHH
T ss_pred             CCCHHHHHHHHHHccCCHhHCHhHHHHH-HHHHHH
Confidence            8999999999999999999999 55554 566654

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4.6e-53  Score=417.10  Aligned_cols=258  Identities=30%  Similarity=0.444  Sum_probs=217.8

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +++|+++++||+|+||+||+|+++ +|+.||||++...... ....+.+.+|+.+|+++ +|||||++++++.+++..|+
T Consensus         1 ~~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~-~~~~~~~~~E~~il~~l-~hpnIv~~~~~~~~~~~~~i   77 (286)
T d1ob3a_           1 MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKED-EGIPSTTIREISILKEL-KHSNIVKLYDVIHTKKRLVL   77 (286)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGG-GCCCHHHHHHHHGGGGC-CCTTBCCEEEEEECSSCEEE
T ss_pred             CCCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcC-hHHHHHHHHHHHHHHhC-CCCcEEeeeeecccCCceeE
Confidence            479999999999999999999885 7899999999766432 33347889999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC-
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG-  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~-  238 (586)
                      +|||+.++.+..+....+.+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||.|...... 
T Consensus        78 ~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll---~~~~~~kl~DfG~a~~~~~~~  154 (286)
T d1ob3a_          78 VFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI---NREGELKIADFGLARAFGIPV  154 (286)
T ss_dssp             EEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTSCEEECCTTHHHHHCC--
T ss_pred             EEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeE---cCCCCEEecccccceecccCc
Confidence            99999888777777778889999999999999999999999999999999999999   66789999999999876543 


Q ss_pred             CceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCC------------
Q 043828          239 EQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER------------  304 (586)
Q Consensus       239 ~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~------------  304 (586)
                      .......|++.|+|||++.+  .++.++|||||||++|+|++|++||.+.+..+....+.........            
T Consensus       155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  234 (286)
T d1ob3a_         155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY  234 (286)
T ss_dssp             -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred             cccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhc
Confidence            23345679999999999863  5799999999999999999999999998887777666542211111            


Q ss_pred             -------------CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          305 -------------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       305 -------------~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                                   ...+.+++.+++||.+||++||++|||++|+|+||||+.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             ccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence                         112457889999999999999999999999999999973

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-53  Score=422.20  Aligned_cols=261  Identities=24%  Similarity=0.355  Sum_probs=216.2

Q ss_pred             ccCeeecceeccCCceEEEEEEEccC-CcEEEEEEeeccccCChhcHHHHHHHHHHHHhCC--CCCCeeEEEEEEEe---
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIET-GETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP--KHPNIVTYKEAYED---  153 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~-~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~--~hpnIv~l~~~~~~---  153 (586)
                      .++|++++.||+|+||+||+|++..+ ++.||||++........ ....+.+|+.+|+.|.  +||||++++++|..   
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~   84 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG-MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT   84 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS-CBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccch-HHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence            46899999999999999999999766 56799999976543322 2234567888777653  79999999999863   


Q ss_pred             --CCeEEEEEeccCCCChHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecc
Q 043828          154 --KDAIYLVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFG  230 (586)
Q Consensus       154 --~~~~~iv~E~~~gg~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg  230 (586)
                        ...+|++||||.++.+..... ....+++..++.++.|++.||.|||++||+||||||+|||+   +..+.+||+|||
T Consensus        85 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi---~~~~~~kl~dfg  161 (305)
T d1blxa_          85 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFG  161 (305)
T ss_dssp             SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECSCC
T ss_pred             ccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEE---cCCCCeeecchh
Confidence              357899999999877754433 34569999999999999999999999999999999999999   677899999999


Q ss_pred             cccccCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCC------
Q 043828          231 LSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE------  303 (586)
Q Consensus       231 ~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~------  303 (586)
                      ++............+||+.|+|||++. ..|+.++||||+||++|+|++|.+||.+.+..+....+........      
T Consensus       162 ~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  241 (305)
T d1blxa_         162 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPR  241 (305)
T ss_dssp             SCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCT
T ss_pred             hhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccc
Confidence            998766555666788999999999986 5799999999999999999999999999988887777654211100      


Q ss_pred             -----------------CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          304 -----------------RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       304 -----------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                       ...++.+++.+++||.+||++||++|||++|+|+||||+..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i  299 (305)
T d1blxa_         242 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL  299 (305)
T ss_dssp             TCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             cccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCc
Confidence                             01134578999999999999999999999999999999864

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.7e-52  Score=411.60  Aligned_cols=247  Identities=21%  Similarity=0.317  Sum_probs=212.2

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++.+.||+|+||+||+|++..+|+.||||++....    ...+.+.+|+.+|+++ +|||||++++++.+++.+||
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~----~~~~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~i   90 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYI   90 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC----SCHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEE
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc----chHHHHHHHHHHHHhC-CCCCEecCCccEeeCCeeEE
Confidence            358999999999999999999999999999999986543    2356799999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          160 VMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |||||++|+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+....
T Consensus        91 v~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl---~~~~~~Kl~DFG~a~~~~~  167 (287)
T d1opja_          91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLMTG  167 (287)
T ss_dssp             EEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCCCTTTCCS
T ss_pred             EeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEE---CCCCcEEEccccceeecCC
Confidence            99999999999998764  568999999999999999999999999999999999999   5678999999999987654


Q ss_pred             CCc--eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCC-CCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          238 GEQ--FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPF-WAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       238 ~~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ...  .....||+.|+|||++. +.|+.++|||||||++|+|++|..|| ...+...+...+..+ ...+  ..+.+++.
T Consensus       168 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~-~~~~--~~~~~~~~  244 (287)
T d1opja_         168 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRME--RPEGCPEK  244 (287)
T ss_dssp             SSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-CCCC--CCTTCCHH
T ss_pred             CCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcC-CCCC--CCccchHH
Confidence            332  23346899999999986 57999999999999999999966655 455565555555443 3222  23568999


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhc
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      +++||.+||+.||.+|||++|+++
T Consensus       245 l~~li~~cl~~dP~~Rps~~ei~~  268 (287)
T d1opja_         245 VYELMRACWQWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCCHhHCcCHHHHHH
Confidence            999999999999999999999976

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-52  Score=420.37  Aligned_cols=251  Identities=22%  Similarity=0.327  Sum_probs=212.5

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCc-----EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGE-----TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      ++|++++.||+|+||+||+|++..+++     .||+|++.....  ......+.+|+.+|.++.+|||||++++++.+.+
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~  114 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD--SSEREALMSELKMMTQLGSHENIVNLLGACTLSG  114 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccC--HHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC
Confidence            689999999999999999999876543     689998865432  2234678899999999878999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhC-----------------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCc
Q 043828          156 AIYLVMELCEGGELFDRIVNK-----------------------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPEN  212 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~-----------------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~N  212 (586)
                      .+|||||||++|+|.+++...                       ..+++..+..++.||+.||.|||+++|+||||||+|
T Consensus       115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~N  194 (325)
T d1rjba_         115 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN  194 (325)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGG
T ss_pred             eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhc
Confidence            999999999999999999754                       248899999999999999999999999999999999


Q ss_pred             eEeecCCCCCceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCC
Q 043828          213 FLFADGSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAET  287 (586)
Q Consensus       213 ill~~~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~  287 (586)
                      ||+   +.++.+||+|||+|+.......   .....||+.|||||++. +.|+.++|||||||++|||++ |.+||.+.+
T Consensus       195 ill---~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~  271 (325)
T d1rjba_         195 VLV---THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  271 (325)
T ss_dssp             EEE---ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             ccc---ccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCC
Confidence            999   5678999999999987644332   23456899999999986 579999999999999999997 899998877


Q ss_pred             HHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          288 EEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       288 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .......+......++.+  ..+|+++++||.+||+.||++|||++||++|
T Consensus       272 ~~~~~~~~~~~~~~~~~p--~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         272 VDANFYKLIQNGFKMDQP--FYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             CSHHHHHHHHTTCCCCCC--TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCC--CcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            666666666665544433  4689999999999999999999999999986

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.5e-52  Score=414.22  Aligned_cols=260  Identities=29%  Similarity=0.431  Sum_probs=216.8

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe------
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED------  153 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~------  153 (586)
                      .++|+++++||+|+||+||+|++..+|+.||||++.+..... .....+.+|+.+|+++ +||||+++++++..      
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~-~~~~~~~~E~~il~~l-~h~nii~~~~~~~~~~~~~~   86 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-GFPITALREIKILQLL-KHENVVNLIEICRTKASPYN   86 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTT-SSCHHHHHHHHHHHHC-CCTTBCCEEEEEEC------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcch-HHHHHHHHHHHHHHHh-cCCCccceEeeeeccccccc
Confidence            579999999999999999999999999999999997765433 3446788999999999 89999999999854      


Q ss_pred             --CCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          154 --KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       154 --~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                        ++.+|+|||||.++.+.........+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+
T Consensus        87 ~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl---~~~~~~kl~dfg~  163 (318)
T d3blha1          87 RCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGL  163 (318)
T ss_dssp             ----CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTSCEEECCCTT
T ss_pred             ccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheee---cCCCcEEeeecce
Confidence              45689999999887776655666789999999999999999999999999999999999999   6778999999999


Q ss_pred             ccccCCC-----CceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCC
Q 043828          232 SIFFKPG-----EQFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFER  304 (586)
Q Consensus       232 a~~~~~~-----~~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~  304 (586)
                      +......     ......+||+.|+|||++.  ..|+.++||||+||++|+|++|++||.+.+.......+......++.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~  243 (318)
T d3blha1         164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP  243 (318)
T ss_dssp             CEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred             eeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence            9765432     1223467999999999985  35899999999999999999999999998888877776654443333


Q ss_pred             CCCCC----------------------------CCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          305 DPWPK----------------------------VSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       305 ~~~~~----------------------------~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      ..+..                            .++++++||.+||++||++|||++|+|+||||+..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~  311 (318)
T d3blha1         244 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  311 (318)
T ss_dssp             TTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSS
T ss_pred             hhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhhccC
Confidence            22211                            26788999999999999999999999999999853

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-52  Score=408.82  Aligned_cols=250  Identities=23%  Similarity=0.385  Sum_probs=205.7

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++++.||+|+||+||+|+.   +..||||++...... ....+.+.+|+.+|+++ +|||||++++++. .+.+||
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~---~~~vAvK~~~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~~~~~~~-~~~~~l   80 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKW---HGDVAVKMLNVTAPT-PQQLQAFKNEVGVLRKT-RHVNILLFMGYST-APQLAI   80 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEES---SSEEEEEECCCSSCC-TTHHHHHHHHHHHHTTC-CCTTBCCEEEEEC-SSSCEE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEE---CCEEEEEEEEcccCC-HHHHHHHHHHHHHHHhC-CCCCEeeeeEEEe-ccEEEE
Confidence            46899999999999999999963   346999999765433 33467899999999999 8999999999864 467899


Q ss_pred             EEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCC
Q 043828          160 VMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPG  238 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~  238 (586)
                      |||||+||+|.+++... ..+++..+..++.||+.||.|||+++||||||||+|||+   +.++.+||+|||+|......
T Consensus        81 v~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl---~~~~~~Kl~DFGla~~~~~~  157 (276)
T d1uwha_          81 VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATVKSRW  157 (276)
T ss_dssp             EEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---ETTSSEEECCCCCSCC----
T ss_pred             EEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEE---cCCCCEEEccccceeecccc
Confidence            99999999999999754 569999999999999999999999999999999999999   56789999999999876432


Q ss_pred             ---CceecccCCccccchhhhhc----cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHH-HHHHHhCccCCC-CCCCCC
Q 043828          239 ---EQFCEIVGSPYYMAPEVLRR----NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGI-AHAIIRGKIDFE-RDPWPK  309 (586)
Q Consensus       239 ---~~~~~~~gt~~y~aPE~l~~----~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~-~~~~~~  309 (586)
                         .......||+.|||||++..    .|+.++|||||||++|||+||..||.+.+.... ...+.++..... ......
T Consensus       158 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~  237 (276)
T d1uwha_         158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN  237 (276)
T ss_dssp             --------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTT
T ss_pred             CCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhcccc
Confidence               23345689999999999852    478899999999999999999999988665444 444444433222 123456


Q ss_pred             CCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          310 VSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +++.+.+||.+||+.||.+|||++|++++
T Consensus       238 ~~~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         238 CPKAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             chHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            89999999999999999999999999986

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-52  Score=420.91  Aligned_cols=253  Identities=30%  Similarity=0.410  Sum_probs=211.9

Q ss_pred             CeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC------C
Q 043828           82 KYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK------D  155 (586)
Q Consensus        82 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~------~  155 (586)
                      +|+.+++||+|+||+||+|++..+|+.||||++.+...       ...+|+.+|++| +||||++++++|...      .
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-------~~~~Ei~il~~l-~h~niv~~~~~~~~~~~~~~~~   92 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKL-DHCNIVRLRYFFYSSGEKKDEV   92 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-------SCCHHHHHHHHC-CCTTBCCEEEEEEEC--CCSCC
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch-------HHHHHHHHHHhc-CCCCCCcEEEEEEecCccCCce
Confidence            79999999999999999999999999999999976532       224699999999 899999999998543      3


Q ss_pred             eEEEEEeccCCCChHHH---HHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          156 AIYLVMELCEGGELFDR---IVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~---l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                      ++|||||||+++.+..+   ......+++..++.++.||+.||.|||++||+||||||+|||++.  ....+||+|||++
T Consensus        93 ~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~--~~~~~kl~DFG~a  170 (350)
T d1q5ka_          93 YLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSA  170 (350)
T ss_dssp             EEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECT--TTCCEEECCCTTC
T ss_pred             EEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEec--CCCceeEecccch
Confidence            58999999987643322   234567999999999999999999999999999999999999942  3358999999999


Q ss_pred             cccCCCCceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCc-----------
Q 043828          233 IFFKPGEQFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGK-----------  299 (586)
Q Consensus       233 ~~~~~~~~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~-----------  299 (586)
                      ............+||+.|+|||++.  ..|+.++||||+||++|+|++|.+||...+....+..+.+..           
T Consensus       171 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~  250 (350)
T d1q5ka_         171 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM  250 (350)
T ss_dssp             EECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred             hhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhh
Confidence            8877666667788999999999875  368999999999999999999999999888777666654311           


Q ss_pred             ------cCCCC--------CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          300 ------IDFER--------DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       300 ------~~~~~--------~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                            ..++.        ...+.+++++++||.+||..||.+|||+.|+|+||||+..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  309 (350)
T d1q5ka_         251 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  309 (350)
T ss_dssp             CC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             ccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence                  11111        1124578999999999999999999999999999999864

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=8e-52  Score=409.20  Aligned_cols=250  Identities=23%  Similarity=0.362  Sum_probs=204.8

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCc---EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGE---TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~---~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      .++|++.+.||+|+||+||+|++..+|+   .||+|++....  .....+.+.+|+.+|++| +|||||++++++..++.
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~~~  101 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQF-DHPNVIHLEGVVTKSTP  101 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC--CHHHHHHHHHHHHHHTTC-CCTTBCCEEEEECSSSS
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECccc--CHHHHHHHHHHHHHHHhC-CCCCCccEEEEEeeCCE
Confidence            4689999999999999999999877765   47888775443  233456789999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      +|||||||++|+|.+++.. .+.+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+|+..
T Consensus       102 ~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl---~~~~~~Kl~DFGla~~~  178 (299)
T d1jpaa_         102 VMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV---NSNLVCKVSDFGLSRFL  178 (299)
T ss_dssp             CEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCC------
T ss_pred             EEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEE---CCCCcEEECCcccceEc
Confidence            9999999999999998876 4569999999999999999999999999999999999999   67789999999999876


Q ss_pred             CCCCc------eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCC
Q 043828          236 KPGEQ------FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPW  307 (586)
Q Consensus       236 ~~~~~------~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  307 (586)
                      .....      .....||+.|+|||++. +.|+.++|||||||++|||+| |.+||.+.+..++...+..+...   +..
T Consensus       179 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~---~~~  255 (299)
T d1jpaa_         179 EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRL---PPP  255 (299)
T ss_dssp             -----------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCC---CCC
T ss_pred             cCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCC
Confidence            54322      12245789999999986 578999999999999999998 89999999998888887765432   223


Q ss_pred             CCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          308 PKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       308 ~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ..+++.+.+||.+||+.||.+|||+.||+++
T Consensus       256 ~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         256 MDCPSALHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             ccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            5689999999999999999999999999875

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-52  Score=406.62  Aligned_cols=247  Identities=25%  Similarity=0.355  Sum_probs=208.1

Q ss_pred             ceeccCCceEEEEEEEc--cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEEEecc
Q 043828           87 KELGRGEFGITHQCFEI--ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLVMELC  164 (586)
Q Consensus        87 ~~lG~G~~g~V~~~~~~--~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv~E~~  164 (586)
                      ++||+|+||+||+|.+.  .+++.||||++..... .....+.+.+|+.+|+++ +|||||++++++++ +.+|||||||
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~~E~~il~~l-~HpnIv~~~g~~~~-~~~~lvmE~~   89 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN-DPALKDELLAEANVMQQL-DNPYIVRMIGICEA-ESWMLVMEMA   89 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTC-CCTTBCCEEEEEES-SSEEEEEECC
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhC-CHHHHHHHHHHHHHHHhC-CCCCCceEEEEecc-CCEEEEEEcC
Confidence            46999999999999864  3567899999976543 333457899999999999 89999999999975 4578999999


Q ss_pred             CCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCCce---
Q 043828          165 EGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGEQF---  241 (586)
Q Consensus       165 ~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~~~---  241 (586)
                      ++|+|.+++.....+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+|+........   
T Consensus        90 ~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill---~~~~~~kl~DFGla~~~~~~~~~~~~  166 (277)
T d1xbba_          90 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL---VTQHYAKISDFGLSKALRADENYYKA  166 (277)
T ss_dssp             TTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---EETTEEEECCCTTCEECCTTCSEEEC
T ss_pred             CCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcc---cccCcccccchhhhhhcccccccccc
Confidence            999999999998899999999999999999999999999999999999999   56789999999999876543222   


Q ss_pred             -ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHH
Q 043828          242 -CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAKELV  318 (586)
Q Consensus       242 -~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li  318 (586)
                       ....||+.|+|||++. +.|+.++|||||||++|||++ |.+||.+.+..++...+.++...   +....+|+++.+||
T Consensus       167 ~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~---~~p~~~~~~~~~li  243 (277)
T d1xbba_         167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM---GCPAGCPREMYDLM  243 (277)
T ss_dssp             ----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTCCHHHHHHH
T ss_pred             ccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCC---CCCcccCHHHHHHH
Confidence             2357899999999986 568999999999999999998 89999999988888888776432   12246899999999


Q ss_pred             HHccCCCCCCCCCHHHH---hcCCCcc
Q 043828          319 KNMLDPNPYNRLTLEEV---LENPWIK  342 (586)
Q Consensus       319 ~~~L~~dp~~Rps~~ei---l~hp~~~  342 (586)
                      .+||+.||.+|||+.+|   |+|+|+.
T Consensus       244 ~~cl~~dp~~RPs~~~i~~~L~~~~~~  270 (277)
T d1xbba_         244 NLCWTYDVENRPGFAAVELRLRNYYYD  270 (277)
T ss_dssp             HHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             HHHcCCCHhHCcCHHHHHHHhhCHHhh
Confidence            99999999999999998   4666653

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-52  Score=402.48  Aligned_cols=246  Identities=25%  Similarity=0.413  Sum_probs=204.4

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++++.||+|+||+||+|++. +++.||||++.....    ..+.+.+|+.+++++ +|||||++++++..++.+|||
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~----~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~lv   78 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKL-SHPKLVQLYGVCLEQAPICLV   78 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECSSSSCEEE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcC----cHHHHHHHHHHHHhc-CCCCcccccceeccCCceEEE
Confidence            47999999999999999999875 577899999875432    346789999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      ||||++|+|.+++... ..+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+|+......
T Consensus        79 ~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill---~~~~~~Kl~DFGla~~~~~~~  155 (263)
T d1sm2a_          79 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV---GENQVIKVSDFGMTRFVLDDQ  155 (263)
T ss_dssp             EECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEE---CGGGCEEECSCC---------
T ss_pred             EEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheee---cCCCCeEecccchheeccCCC
Confidence            9999999999988754 568999999999999999999999999999999999999   667899999999998765432


Q ss_pred             c--eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          240 Q--FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       240 ~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      .  .....||+.|+|||++. ..|+.++|||||||++|||+| |.+||...+..++...+..+.....   ...+++++.
T Consensus       156 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~---p~~~~~~l~  232 (263)
T d1sm2a_         156 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK---PRLASTHVY  232 (263)
T ss_dssp             ---------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCC---CTTSCHHHH
T ss_pred             ceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCC---ccccCHHHH
Confidence            2  23467899999999997 479999999999999999999 5777777788888888877643222   245789999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcC
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +||.+||+.||++|||++|+++|
T Consensus       233 ~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         233 QIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHccCCHhHCcCHHHHHHH
Confidence            99999999999999999999986

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-51  Score=398.23  Aligned_cols=246  Identities=22%  Similarity=0.345  Sum_probs=216.8

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYLV  160 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~iv  160 (586)
                      ++|++++.||+|+||+||+|++ .+++.||||++.+...    ..+.+.+|+.+++++ +|||||++++++.+++.+++|
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~-~~~~~vAvK~l~~~~~----~~~~~~~Ev~~~~~l-~HpnIv~~~g~~~~~~~~~iv   77 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKW-RGQYDVAIKMIKEGSM----SEDEFIEEAKVMMNL-SHEKLVQLYGVCTKQRPIFII   77 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEE-TTTEEEEEEEEESSSS----CHHHHHHHHHHHHTC-CCTTBCCEEEEECCSSSEEEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEE-CCCCEEEEEEECcCcC----CHHHHHHHHHHHHhc-CCCceeeEEEEEeeCCceEEE
Confidence            5899999999999999999997 4788999999976543    246799999999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          161 MELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       161 ~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |||+++|+|..++.. ...+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||++.......
T Consensus        78 ~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill---~~~~~~kl~DfG~a~~~~~~~  154 (258)
T d1k2pa_          78 TEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---NDQGVVKVSDFGLSRYVLDDE  154 (258)
T ss_dssp             EECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEE---CTTCCEEECCCSSCCBCSSSS
T ss_pred             EEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEE---cCCCcEEECcchhheeccCCC
Confidence            999999999988664 5678999999999999999999999999999999999999   567899999999998765433


Q ss_pred             c--eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHHH
Q 043828          240 Q--FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEAK  315 (586)
Q Consensus       240 ~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  315 (586)
                      .  .....||+.|+|||++. ..|+.++|||||||++|||+| |..||.+.+..++...+..+....   ....+++.+.
T Consensus       155 ~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~---~p~~~~~~l~  231 (258)
T d1k2pa_         155 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLY---RPHLASEKVY  231 (258)
T ss_dssp             CCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCC---CCTTCCHHHH
T ss_pred             ceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCC---CcccccHHHH
Confidence            2  23467899999999987 578999999999999999998 899999999999888887764322   2246889999


Q ss_pred             HHHHHccCCCCCCCCCHHHHhcC
Q 043828          316 ELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       316 ~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +||.+||+.||++|||++++++|
T Consensus       232 ~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         232 TIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             HHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHccCCHhHCcCHHHHHHH
Confidence            99999999999999999999987

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-52  Score=418.07  Aligned_cols=262  Identities=29%  Similarity=0.504  Sum_probs=220.7

Q ss_pred             ccCeeecceeccCCceEEEEEEEc---cCCcEEEEEEeeccccC-ChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEI---ETGETYACKKIAKEKLK-TEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~~avK~i~~~~~~-~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      +++|++++.||+|+||+||+|++.   .+|+.||+|++.+.... .....+.+.+|+.+|+++.+||||+++++++++..
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~  102 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  102 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence            478999999999999999999874   46899999999765432 22234567889999999955589999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          156 AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      .+|+||||+.+|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|...
T Consensus       103 ~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill---~~~~~vkL~DFG~a~~~  179 (322)
T d1vzoa_         103 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEF  179 (322)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTSCEEESCSSEEEEC
T ss_pred             ceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceee---cCCCCEEEeeccchhhh
Confidence            999999999999999999998899999999999999999999999999999999999999   56789999999999865


Q ss_pred             CCC--CceecccCCccccchhhhhc---cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          236 KPG--EQFCEIVGSPYYMAPEVLRR---NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       236 ~~~--~~~~~~~gt~~y~aPE~l~~---~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      ...  .......|++.|+|||.+..   .++.++|||||||+||+|++|..||.+.+.......+.+.......+....+
T Consensus       180 ~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~  259 (322)
T d1vzoa_         180 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEM  259 (322)
T ss_dssp             CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTS
T ss_pred             cccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcccC
Confidence            432  23445789999999999853   4788999999999999999999999876554444444443333333333568


Q ss_pred             CHHHHHHHHHccCCCCCCCC-----CHHHHhcCCCccCC
Q 043828          311 SKEAKELVKNMLDPNPYNRL-----TLEEVLENPWIKND  344 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rp-----s~~eil~hp~~~~~  344 (586)
                      ++++++||.+||.+||.+||     |++|+++||||+..
T Consensus       260 s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i  298 (322)
T d1vzoa_         260 SALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  298 (322)
T ss_dssp             CHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCC
Confidence            99999999999999999999     58999999999864

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-51  Score=404.38  Aligned_cols=252  Identities=25%  Similarity=0.342  Sum_probs=214.3

Q ss_pred             cCeeecce-eccCCceEEEEEEEcc--CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           81 DKYTFGKE-LGRGEFGITHQCFEIE--TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        81 ~~y~~~~~-lG~G~~g~V~~~~~~~--~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ++|.+.+. ||+|+||+||+|.+..  ++..||||++....  .....+.+.+|+.+|+++ +|||||++++++++ +.+
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~E~~il~~l-~HpnIv~l~g~~~~-~~~   83 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQL-DNPYIVRLIGVCQA-EAL   83 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHC-CCTTBCCEEEEEES-SSE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhc--CHHHHHHHHHHHHHHHhC-CCCCEeeEeeeecc-CeE
Confidence            56888884 9999999999998754  45579999986543  334467899999999999 89999999999875 468


Q ss_pred             EEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      |||||||++|+|.+++.. +..+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+...
T Consensus        84 ~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill---~~~~~~Kl~DFGla~~~~  160 (285)
T d1u59a_          84 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL---VNRHYAKISDFGLSKALG  160 (285)
T ss_dssp             EEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---EETTEEEECCCTTCEECT
T ss_pred             EEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheee---ccCCceeeccchhhhccc
Confidence            999999999999998765 4579999999999999999999999999999999999999   457899999999998765


Q ss_pred             CCCce----ecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          237 PGEQF----CEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       237 ~~~~~----~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      .....    ....||+.|+|||++. +.|+.++|||||||++|||+| |..||.+.+..++...+..+...   +..+.+
T Consensus       161 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~---~~p~~~  237 (285)
T d1u59a_         161 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM---ECPPEC  237 (285)
T ss_dssp             TCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCC---CCCTTC
T ss_pred             ccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCcC
Confidence            43322    2356899999999986 578999999999999999998 99999988888888887776532   122568


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHH---hcCCCcc
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEV---LENPWIK  342 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~ei---l~hp~~~  342 (586)
                      ++++.+||.+||+.||++|||+.+|   |+|+|+.
T Consensus       238 ~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         238 PPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            9999999999999999999999888   5678774

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=1.9e-51  Score=413.75  Aligned_cols=255  Identities=27%  Similarity=0.493  Sum_probs=213.1

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC--Ce
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK--DA  156 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~--~~  156 (586)
                      ..++|+++++||+|+||+||+|+++.+|+.||+|++.+..      .+.+.+|+.+|+.+.+||||++++++|...  ..
T Consensus        33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~------~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~  106 (328)
T d3bqca1          33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK------KKKIKREIKILENLRGGPNIITLADIVKDPVSRT  106 (328)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC------HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCS
T ss_pred             CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH------HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCc
Confidence            3478999999999999999999999999999999986432      467889999999996799999999999854  56


Q ss_pred             EEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          157 IYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      +|+|||||.+++|....   +.+++..++.++.||+.||.|||++||+||||||+|||++  ..+..+||+|||+|....
T Consensus       107 ~~~v~e~~~~~~L~~~~---~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~--~~~~~vkl~DFG~a~~~~  181 (328)
T d3bqca1         107 PALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYH  181 (328)
T ss_dssp             EEEEEECCCSCBGGGTT---TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE--TTTTEEEECCGGGCEECC
T ss_pred             eeEEEeecCCCcHHHHh---cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEc--CCCCeeeecccccceecc
Confidence            99999999999997653   5699999999999999999999999999999999999995  234579999999999877


Q ss_pred             CCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCH-HHHHHHHHh-------------Ccc
Q 043828          237 PGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETE-EGIAHAIIR-------------GKI  300 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~-------------~~~  300 (586)
                      ........+||+.|+|||++.+  .|+.++||||+||++|+|++|..||..... ......+..             ...
T Consensus       182 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~  261 (328)
T d3bqca1         182 PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNI  261 (328)
T ss_dssp             TTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTC
T ss_pred             CCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhccc
Confidence            7666677889999999999864  589999999999999999999999976432 222222111             000


Q ss_pred             C--------------------CCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          301 D--------------------FERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       301 ~--------------------~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                      .                    +....+..+++++++||.+||..||.+|||++|+|+||||+..
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v  325 (328)
T d3bqca1         262 ELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTV  325 (328)
T ss_dssp             CCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTS
T ss_pred             ccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence            0                    1111223478999999999999999999999999999999864

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-51  Score=404.04  Aligned_cols=260  Identities=28%  Similarity=0.433  Sum_probs=221.7

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      +++|++++.||+|+||+||+|++..+|+.||||++..... .......+.+|+.+|+.+ +||||+++++++.+...+++
T Consensus         1 ~~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~i   78 (292)
T d1unla_           1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTL   78 (292)
T ss_dssp             CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTC-CCTTBCCEEEEEECSSEEEE
T ss_pred             CCCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhC-ChHHHHHHHHHHHHHHhc-CcCCEEeeccccccccceeE
Confidence            4689999999999999999999999999999999976643 334567899999999999 89999999999999999999


Q ss_pred             EEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCCCC
Q 043828          160 VMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKPGE  239 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~~~  239 (586)
                      |+|++.+++|..++...+.+++..++.++.|++.||+|||++||+||||||+|||+   +..+.+||+|||.|.......
T Consensus        79 v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli---~~~~~~kl~DFG~a~~~~~~~  155 (292)
T d1unla_          79 VFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAFGIPV  155 (292)
T ss_dssp             EEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---CTTCCEEECCCTTCEECCSCC
T ss_pred             EeeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCccccc---ccCCceeeeecchhhcccCCC
Confidence            99999999999888888899999999999999999999999999999999999999   567899999999998765433


Q ss_pred             -ceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCC-CCCHHHHHHHHHhCccCCC------------
Q 043828          240 -QFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFW-AETEEGIAHAIIRGKIDFE------------  303 (586)
Q Consensus       240 -~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~-~~~~~~~~~~i~~~~~~~~------------  303 (586)
                       ......+++.|+|||++..  .++.++||||+||++|+|++|..||. +.+..+....+........            
T Consensus       156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (292)
T d1unla_         156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD  235 (292)
T ss_dssp             SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred             ccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhccc
Confidence             3344567899999999864  37899999999999999999998864 5555555555443211111            


Q ss_pred             -------------CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          304 -------------RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       304 -------------~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                   ....+.+++.+++||.+||+.||.+||||+|+|+||||+..
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~  289 (292)
T d1unla_         236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF  289 (292)
T ss_dssp             CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSC
T ss_pred             ccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCC
Confidence                         11224568899999999999999999999999999999853

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-51  Score=416.91  Aligned_cols=259  Identities=25%  Similarity=0.434  Sum_probs=213.2

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC--
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD--  155 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~--  155 (586)
                      .+.++|++++.||+|+||+||+|++..+|+.||||++.+... .....+.+.+|+.+|+.+ +|||||+++++|...+  
T Consensus        15 ~~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpniv~l~~~~~~~~~~   92 (346)
T d1cm8a_          15 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHM-RHENVIGLLDVFTPDETL   92 (346)
T ss_dssp             CCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTS-SHHHHHHHHHHHHHHHHC-CBTTBCCCSEEECSCSST
T ss_pred             ecCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhc-ChHHHHHHHHHHHHHHhc-CCCCeeEEEEEeccCccc
Confidence            356799999999999999999999999999999999976533 344567889999999999 8999999999998654  


Q ss_pred             ----eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccc
Q 043828          156 ----AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGL  231 (586)
Q Consensus       156 ----~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~  231 (586)
                          .+||||||| +.+|..++ .+..+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+
T Consensus        93 ~~~~~~~lv~e~~-~~~l~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~---~~~~~~kl~Dfg~  167 (346)
T d1cm8a_          93 DDFTDFYLVMPFM-GTDLGKLM-KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGL  167 (346)
T ss_dssp             TTCCCCEEEEECC-SEEHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTT
T ss_pred             cccceEEEEEecc-cccHHHHH-HhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhc---ccccccccccccc
Confidence                579999999 56776655 45679999999999999999999999999999999999999   6788999999999


Q ss_pred             ccccCCCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccC--------
Q 043828          232 SIFFKPGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID--------  301 (586)
Q Consensus       232 a~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~--------  301 (586)
                      |.....  ......||+.|+|||++.+  .++.++||||+||++|+|++|.+||.+.+.......+......        
T Consensus       168 a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (346)
T d1cm8a_         168 ARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR  245 (346)
T ss_dssp             CEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred             eeccCC--ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhh
Confidence            987643  3456789999999999853  4789999999999999999999999988776665544332111        


Q ss_pred             ---------------CCCC----CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          302 ---------------FERD----PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       302 ---------------~~~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                                     ....    ..+.+++.+++||.+||..||.+|||++|+|+||||+...
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         246 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  308 (346)
T ss_dssp             CSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             hcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence                           1111    2346789999999999999999999999999999998753

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-51  Score=403.25  Aligned_cols=250  Identities=21%  Similarity=0.314  Sum_probs=213.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++++.||+|+||+||+|++. +++.||||++....    ...+.+.+|+.+|+++ +|||||++++++.+ +.+||
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~-~~~~i   84 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGS----MSPDAFLAEANLMKQL-QHQRLVRLYAVVTQ-EPIYI   84 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTS----SCHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEE
T ss_pred             HHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCc----CCHHHHHHHHHHHHhC-CCCCEeEEEeeecc-CCeEE
Confidence            468999999999999999999864 67889999986543    2346799999999999 89999999998754 56799


Q ss_pred             EEeccCCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          160 VMELCEGGELFDRIVN--KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |||||++|+|.+++..  ..++++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+|+....
T Consensus        85 v~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll---~~~~~~Kl~DFGla~~~~~  161 (272)
T d1qpca_          85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---SDTLSCKIADFGLARLIED  161 (272)
T ss_dssp             EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CTTSCEEECCCTTCEECSS
T ss_pred             EEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheee---ecccceeeccccceEEccC
Confidence            9999999999887754  2359999999999999999999999999999999999999   6788999999999988754


Q ss_pred             CCc--eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhC-CCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          238 GEQ--FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCG-VPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       238 ~~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ...  .....||+.|+|||++. +.|+.++|||||||++|||+|| .+||...+..++...+..+....   ....++++
T Consensus       162 ~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~---~p~~~~~~  238 (272)
T d1qpca_         162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV---RPDNCPEE  238 (272)
T ss_dssp             SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC---CCTTCCHH
T ss_pred             CccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC---CcccChHH
Confidence            432  23457899999999987 5689999999999999999995 56666777777777777654322   12468999


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhc--CCCcc
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLE--NPWIK  342 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~--hp~~~  342 (586)
                      +.+||.+||+.||++|||++++++  |+||.
T Consensus       239 l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         239 LYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence            999999999999999999999998  78875

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-51  Score=411.87  Aligned_cols=259  Identities=27%  Similarity=0.467  Sum_probs=211.5

Q ss_pred             CcccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC--
Q 043828           78 NILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD--  155 (586)
Q Consensus        78 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~--  155 (586)
                      .+..+|++++.||+|+||+||+|++..+|+.||||++.+..  .....+.+.+|+.+|++| +||||+++++++....  
T Consensus         5 ~i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~Ei~il~~l-~hp~iv~~~~~~~~~~~~   81 (345)
T d1pmea_           5 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRF-RHENIIGINDIIRAPTIE   81 (345)
T ss_dssp             CCCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT--CHHHHHHHHHHHHHHHHC-CCTTBCCCCEEECCSSTT
T ss_pred             CcCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc--ChHHHHHHHHHHHHHHHc-CCCCCCcEEEEEeecccc
Confidence            34568999999999999999999999999999999997543  334456788999999999 8999999999997643  


Q ss_pred             ---eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          156 ---AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       156 ---~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                         .+|++ +|+.||+|.+++..+ .+++..++.++.||+.||.|||++|||||||||+|||+   +..+.+||+|||+|
T Consensus        82 ~~~~~~l~-~~~~~g~L~~~l~~~-~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl---~~~~~~kl~DfG~a  156 (345)
T d1pmea_          82 QMKDVYLV-THLMGADLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA  156 (345)
T ss_dssp             TCCCEEEE-EECCCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---CTTCCEEECCCTTC
T ss_pred             ccceEEEE-EeecCCchhhhhhcC-CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEE---CCCCCEEEcccCce
Confidence               34555 556689999998764 79999999999999999999999999999999999999   56789999999999


Q ss_pred             cccCCCC----ceecccCCccccchhhhh--ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccC-----
Q 043828          233 IFFKPGE----QFCEIVGSPYYMAPEVLR--RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKID-----  301 (586)
Q Consensus       233 ~~~~~~~----~~~~~~gt~~y~aPE~l~--~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~-----  301 (586)
                      .......    .....+||+.|+|||++.  ..|+.++||||+||++|+|++|..||.+.+..............     
T Consensus       157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  236 (345)
T d1pmea_         157 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED  236 (345)
T ss_dssp             EECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred             eeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhh
Confidence            8654322    234567999999999985  35789999999999999999999999887766554443321100     


Q ss_pred             ---------------CC---C----CCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCC
Q 043828          302 ---------------FE---R----DPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKND  344 (586)
Q Consensus       302 ---------------~~---~----~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~  344 (586)
                                     .+   .    ..++.+++.+++||.+||+.||.+|||++|+|+||||+..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~  301 (345)
T d1pmea_         237 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  301 (345)
T ss_dssp             HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             hhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence                           00   0    1135678999999999999999999999999999999854

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-50  Score=409.24  Aligned_cols=257  Identities=25%  Similarity=0.410  Sum_probs=203.6

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe-----
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED-----  153 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~-----  153 (586)
                      +.++|+++++||+|+||+||+|++..+|+.||||++.+... .......+.+|+.+|+++ +|||||+++++|..     
T Consensus        15 i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l-~hpnIv~~~~~f~~~~~~~   92 (355)
T d2b1pa1          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKTLE   92 (355)
T ss_dssp             EETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTS-SHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCCSTT
T ss_pred             ecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhc-CHHHHHHHHHHHHHHHhc-CCCCeeEEEEEEecccccc
Confidence            45799999999999999999999999999999999987643 344456789999999999 89999999999963     


Q ss_pred             -CCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccc
Q 043828          154 -KDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLS  232 (586)
Q Consensus       154 -~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a  232 (586)
                       ...+|+|||||.++.+ +.+  ...+++..++.++.||+.||.|||++||+||||||+|||+   +.++.+|++|||++
T Consensus        93 ~~~~~~iv~Ey~~~~l~-~~~--~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~---~~~~~~kl~df~~~  166 (355)
T d2b1pa1          93 EFQDVYLVMELMDANLC-QVI--QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA  166 (355)
T ss_dssp             TCCEEEEEEECCSEEHH-HHH--TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCCCC-
T ss_pred             cCceeEEEEeccchHHH-Hhh--hcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCcccccc---ccccceeeechhhh
Confidence             3689999999976544 444  3568999999999999999999999999999999999999   66788999999999


Q ss_pred             cccCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCcc-----------
Q 043828          233 IFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKI-----------  300 (586)
Q Consensus       233 ~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~-----------  300 (586)
                      ............+||+.|+|||++. ..++.++||||+||++|+|++|.+||.+.+.......+.....           
T Consensus       167 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~  246 (355)
T d2b1pa1         167 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ  246 (355)
T ss_dssp             --------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSC
T ss_pred             hccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhh
Confidence            8776666666778999999999986 4689999999999999999999999998887766555532111           


Q ss_pred             -----------CCCCCCC----------------CCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccC
Q 043828          301 -----------DFERDPW----------------PKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKN  343 (586)
Q Consensus       301 -----------~~~~~~~----------------~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~  343 (586)
                                 ......+                ...++++++||++||..||++||||+|+|+||||+.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~  316 (355)
T d2b1pa1         247 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  316 (355)
T ss_dssp             HHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             hhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence                       1110000                113567899999999999999999999999999985

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-50  Score=400.59  Aligned_cols=251  Identities=24%  Similarity=0.336  Sum_probs=212.2

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcE--EEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGET--YACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~--~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      .++|++.+.||+|+||+||+|++..+|..  ||||++.....  ....+.+.+|+.+|.++.+|||||++++++.+.+.+
T Consensus         9 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~   86 (309)
T d1fvra_           9 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS--KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL   86 (309)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred             HHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccC--hHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCee
Confidence            36899999999999999999999888875  56676654332  223467899999999987799999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCC
Q 043828          158 YLVMELCEGGELFDRIVNK----------------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSEN  221 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~  221 (586)
                      |||||||+||+|.+++...                ..+++..+..++.||+.||.|||+++|+||||||+|||+   +..
T Consensus        87 ~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~---~~~  163 (309)
T d1fvra_          87 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV---GEN  163 (309)
T ss_dssp             EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---CGG
T ss_pred             EEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEE---cCC
Confidence            9999999999999998654                568999999999999999999999999999999999999   567


Q ss_pred             CceEEeecccccccCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCC-CCCCCCCHHHHHHHHHhCc
Q 043828          222 SQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGV-PPFWAETEEGIAHAIIRGK  299 (586)
Q Consensus       222 ~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~-~pf~~~~~~~~~~~i~~~~  299 (586)
                      +.+||+|||+|+............||+.|+|||.+. +.|+.++|||||||++|+|++|. +||.+.+..++...+..+.
T Consensus       164 ~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~  243 (309)
T d1fvra_         164 YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY  243 (309)
T ss_dssp             GCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTC
T ss_pred             CceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcC
Confidence            899999999998765444444567999999999996 56899999999999999999965 6788888888888776653


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          300 IDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       300 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .   .+.+..+++++++||.+||+.||++|||+.||++|
T Consensus       244 ~---~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         244 R---LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             C---CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             C---CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            2   22235689999999999999999999999999987

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-50  Score=391.51  Aligned_cols=252  Identities=21%  Similarity=0.292  Sum_probs=208.3

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++++.||+|+||+||+|++..+ +.||||++.....    ..+.+.+|+.+|+++ +|||||++++++.+ +.+|+
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~----~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~-~~~~l   88 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKL-RHEKLVQLYAVVSE-EPIYI   88 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSS----CHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSCEE
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccC----CHHHHHHHHHHHHhc-ccCCEeEEEEEEec-CCeEE
Confidence            36899999999999999999987654 5799999865432    346799999999999 89999999999854 56899


Q ss_pred             EEeccCCCChHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          160 VMELCEGGELFDRIVN--KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      |||||++|+|..++..  ...+++..+..++.||+.||+|||++||+||||||+|||+   +.++.+||+|||+|+....
T Consensus        89 v~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll---~~~~~~kl~DfGla~~~~~  165 (285)
T d1fmka3          89 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GENLVCKVADFGLARLIED  165 (285)
T ss_dssp             EECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CGGGCEEECCCCTTC----
T ss_pred             EEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEE---CCCCcEEEcccchhhhccC
Confidence            9999999999888764  4579999999999999999999999999999999999999   5678999999999987643


Q ss_pred             CC--ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhC-CCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHH
Q 043828          238 GE--QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCG-VPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKE  313 (586)
Q Consensus       238 ~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  313 (586)
                      ..  ......||+.|+|||++. +.++.++|||||||++|||++| .+||......++...+.++.. .  +..+.++++
T Consensus       166 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~-~--~~~~~~~~~  242 (285)
T d1fmka3         166 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-M--PCPPECPES  242 (285)
T ss_dssp             ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC-C--CCCTTSCHH
T ss_pred             CCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC-C--CCCcccCHH
Confidence            33  233467899999999986 5789999999999999999995 555566677777777766532 2  233578999


Q ss_pred             HHHHHHHccCCCCCCCCCHHHHhc--CCCccCC
Q 043828          314 AKELVKNMLDPNPYNRLTLEEVLE--NPWIKND  344 (586)
Q Consensus       314 ~~~li~~~L~~dp~~Rps~~eil~--hp~~~~~  344 (586)
                      +++||.+||+.||++|||+++|++  ++||...
T Consensus       243 l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~  275 (285)
T d1fmka3         243 LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  275 (285)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             HHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence            999999999999999999999998  8999764

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-49  Score=389.78  Aligned_cols=248  Identities=22%  Similarity=0.302  Sum_probs=203.3

Q ss_pred             cCeeecceeccCCceEEEEEEEccCC----cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETG----ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~----~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      ..|++.+.||+|+||+||+|.+..++    ..||||++....  .......+.+|+.+|++| +|||||++++++.+.+.
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l-~H~nIv~~~g~~~~~~~   83 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQF-SHHNIIRLEGVISKYKP   83 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSSSS
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECccc--ChHHHHHHHHHHHHHHhc-CCCCEeeeeEEEecCCc
Confidence            46999999999999999999876554    469999986543  233456788999999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      +++|||||.++++.+.+... ..+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+|+..
T Consensus        84 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl---~~~~~~Kl~DFGla~~~  160 (283)
T d1mqba_          84 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVL  160 (283)
T ss_dssp             EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---CTTCCEEECCCCC----
T ss_pred             eEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccceEEE---CCCCeEEEcccchhhcc
Confidence            99999999999998887754 579999999999999999999999999999999999999   67889999999999876


Q ss_pred             CCCC----ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhC-CCCCCCCCHHHHHHHHHhCccCCCCCCCCC
Q 043828          236 KPGE----QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCG-VPPFWAETEEGIAHAIIRGKIDFERDPWPK  309 (586)
Q Consensus       236 ~~~~----~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  309 (586)
                      ....    ......||+.|+|||++. +.|+.++|||||||++|||++| .+||...+..++...+..+.. .+  ....
T Consensus       161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~-~~--~~~~  237 (283)
T d1mqba_         161 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFR-LP--TPMD  237 (283)
T ss_dssp             -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC-CC--CCTT
T ss_pred             cCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCC-CC--Cchh
Confidence            4432    123356899999999986 4789999999999999999995 555666677777777666532 22  2246


Q ss_pred             CCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          310 VSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       310 ~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ++..+.+||.+||+.||++|||+.||++
T Consensus       238 ~~~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         238 CPSAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             CBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             hHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence            8899999999999999999999999987

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-50  Score=391.33  Aligned_cols=249  Identities=24%  Similarity=0.354  Sum_probs=202.7

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCC---cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETG---ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~---~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      .++|++++.||+|+||+||+|++..++   ..||+|++....  .....+.+.+|+.+|+++ +|||||++++++. ++.
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~-~~~   81 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQF-DHPHIVKLIGVIT-ENP   81 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT--SHHHHHHHHHHHHHHHTC-CCTTBCCEEEEEC-SSS
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEecccc--CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEe-cCe
Confidence            368999999999999999999886543   468888875432  344457789999999999 8999999999986 467


Q ss_pred             EEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      +|+|||||++|+|.+++.. ...+++..+..++.||+.||.|||+++|+||||||+||++   +..+.+||+|||+|+..
T Consensus        82 ~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll---~~~~~~Kl~DfG~a~~~  158 (273)
T d1mp8a_          82 VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYM  158 (273)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---EETTEEEECC-------
T ss_pred             EEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheee---cCCCcEEEccchhheec
Confidence            8999999999999988765 4569999999999999999999999999999999999999   45678999999999876


Q ss_pred             CCCC--ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCC
Q 043828          236 KPGE--QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVS  311 (586)
Q Consensus       236 ~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  311 (586)
                      ....  ......||+.|+|||++. +.|+.++|||||||++|||++ |.+||...+..++...+..+...   +.++.+|
T Consensus       159 ~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~---~~~~~~~  235 (273)
T d1mp8a_         159 EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL---PMPPNCP  235 (273)
T ss_dssp             ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---CCCTTCC
T ss_pred             cCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCC
Confidence            5332  234467899999999996 578999999999999999998 89999998888888888776532   2345789


Q ss_pred             HHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          312 KEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       312 ~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      +.+.+||.+||+.||.+|||+.||++|
T Consensus       236 ~~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         236 PTLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            999999999999999999999999875

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-50  Score=390.68  Aligned_cols=250  Identities=23%  Similarity=0.337  Sum_probs=204.4

Q ss_pred             cCeeecceeccCCceEEEEEEEcc-CC--cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIE-TG--ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAI  157 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~-~~--~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~  157 (586)
                      ++|++.+.||+|+||+||+|+... ++  ..||||++.+.........+.+.+|+.+|+++ +|||||++++++.+ ..+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l-~H~nIv~~~g~~~~-~~~   85 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLIRLYGVVLT-PPM   85 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-CCTTBCCEEEEECS-SSC
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEee-cch
Confidence            579999999999999999998643 33  36899999877665555567899999999999 89999999999976 467


Q ss_pred             EEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          158 YLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       158 ~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      ++|||||++|+|.+++.. .+.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||+++...
T Consensus        86 ~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~---~~~~vkl~DfGl~~~~~  162 (273)
T d1u46a_          86 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA---TRDLVKIGDFGLMRALP  162 (273)
T ss_dssp             EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE---ETTEEEECCCTTCEECC
T ss_pred             heeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccc---cccceeeccchhhhhcc
Confidence            899999999999987765 45699999999999999999999999999999999999994   56789999999999865


Q ss_pred             CCCc----eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          237 PGEQ----FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       237 ~~~~----~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      ....    .....|++.|+|||++. ..++.++|||||||++|||+| |..||.+.+..+....+.+....++.  .+.+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~~  240 (273)
T d1u46a_         163 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR--PEDC  240 (273)
T ss_dssp             C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCC--CTTC
T ss_pred             cCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCC--cccc
Confidence            4432    22346788999999997 468889999999999999998 89999999999999988887665543  3578


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      |+.+.+||.+||..||++|||+.+|++
T Consensus       241 ~~~l~~li~~cl~~dp~~RPt~~ei~~  267 (273)
T d1u46a_         241 PQDIYNVMVQCWAHKPEDRPTFVALRD  267 (273)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            999999999999999999999999874

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-50  Score=407.34  Aligned_cols=259  Identities=24%  Similarity=0.403  Sum_probs=214.6

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC----
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK----  154 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~----  154 (586)
                      +.++|++++.||+|+||+||+|++..+|+.||||++.+.. ......+.+.+|+.+|++| +|||||++++++...    
T Consensus        16 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l-~h~~iv~~~~~~~~~~~~~   93 (348)
T d2gfsa1          16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLE   93 (348)
T ss_dssp             EETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTT-SSHHHHHHHHHHHHHHHHC-CCTTBCCCSEEECSCSSTT
T ss_pred             CCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchh-cChHHHHHHHHHHHHHHhc-CCCCeeeEEEEEeeccccc
Confidence            4578999999999999999999999999999999997654 2334456788999999999 899999999998643    


Q ss_pred             -CeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccc
Q 043828          155 -DAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSI  233 (586)
Q Consensus       155 -~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~  233 (586)
                       ...++|++|+.||+|.+++.. +++++..++.++.||+.||.|||++||+||||||+|||+   +.++.+|++|||++.
T Consensus        94 ~~~~~~i~~~~~gg~L~~~~~~-~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi---~~~~~~kl~dfg~a~  169 (348)
T d2gfsa1          94 EFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV---NEDCELKILDFGLAR  169 (348)
T ss_dssp             TCCCCEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---CTTCCEEECCC----
T ss_pred             cCceEEEEEeecCCchhhhccc-ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccc---cccccccccccchhc
Confidence             334666777889999998754 579999999999999999999999999999999999999   677899999999987


Q ss_pred             ccCCCCceecccCCccccchhhhhc--cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHhCccCCC--------
Q 043828          234 FFKPGEQFCEIVGSPYYMAPEVLRR--NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAIIRGKIDFE--------  303 (586)
Q Consensus       234 ~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~--------  303 (586)
                      ...  .......||+.|+|||++.+  .++.++|||||||++|+|++|.+||.+.+.......+........        
T Consensus       170 ~~~--~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~  247 (348)
T d2gfsa1         170 HTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS  247 (348)
T ss_dssp             CCT--GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCC
T ss_pred             ccC--cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhcc
Confidence            643  33445679999999998754  468899999999999999999999999888777666654322111        


Q ss_pred             ---------------CC----CCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcCCCccCCC
Q 043828          304 ---------------RD----PWPKVSKEAKELVKNMLDPNPYNRLTLEEVLENPWIKNDN  345 (586)
Q Consensus       304 ---------------~~----~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~hp~~~~~~  345 (586)
                                     ..    .+..+++++++||.+||..||.+|||+.|+|+||||+...
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~  308 (348)
T d2gfsa1         248 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  308 (348)
T ss_dssp             CHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             chhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCC
Confidence                           10    1246789999999999999999999999999999998643

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-49  Score=394.72  Aligned_cols=248  Identities=21%  Similarity=0.285  Sum_probs=205.8

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCc----EEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCe
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGE----TYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDA  156 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~----~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~  156 (586)
                      .+|++++.||+|+||+||+|.+..+|+    .||+|++....  .....+.+.+|+.+|+++ +|||||++++++.++ .
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~g~~~~~-~   84 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-T   84 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC------CTHHHHHHHHHHHHHC-CCTTBCCEEEEEESS-S
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc--CHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecC-C
Confidence            479999999999999999999988876    47777765432  223457899999999999 899999999999864 5


Q ss_pred             EEEEEeccCCCChHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeeccccccc
Q 043828          157 IYLVMELCEGGELFDRIVN-KGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFF  235 (586)
Q Consensus       157 ~~iv~E~~~gg~L~~~l~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~  235 (586)
                      .++++||+.+|+|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||+   +.++.+||+|||+|+..
T Consensus        85 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll---~~~~~~kl~DFGla~~~  161 (317)
T d1xkka_          85 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KTPQHVKITDFGLAKLL  161 (317)
T ss_dssp             EEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---EETTEEEECCCSHHHHT
T ss_pred             eeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhccee---CCCCCeEeeccccceec
Confidence            6788899999999888776 4579999999999999999999999999999999999999   56789999999999876


Q ss_pred             CCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCC
Q 043828          236 KPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       236 ~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      .....   .....||+.|+|||++. +.|+.++|||||||++|||+| |.+||.+.+..++...+..+... +  ..+.+
T Consensus       162 ~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~-~--~p~~~  238 (317)
T d1xkka_         162 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL-P--QPPIC  238 (317)
T ss_dssp             TTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCC-C--CCTTB
T ss_pred             ccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC-C--CCccc
Confidence            54332   23456899999999986 578999999999999999998 89999888887777777766432 1  22468


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ++.+.+||.+||+.||.+|||+.|++.|
T Consensus       239 ~~~~~~li~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         239 TIDVYMIMVKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence            9999999999999999999999999987

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-49  Score=392.84  Aligned_cols=250  Identities=24%  Similarity=0.358  Sum_probs=198.2

Q ss_pred             cCeeecceeccCCceEEEEEEEcc-----CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC-
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIE-----TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK-  154 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~-  154 (586)
                      ++|++++.||+|+||.||+|.+..     +++.||+|++....  .......+.+|+.++.++.+||||+.+++++... 
T Consensus        13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~   90 (299)
T d1ywna1          13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   90 (299)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--CcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCC
Confidence            689999999999999999998754     45689999986543  2333467788888888887899999999987654 


Q ss_pred             CeEEEEEeccCCCChHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecC
Q 043828          155 DAIYLVMELCEGGELFDRIVNK----------------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADG  218 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~  218 (586)
                      ..+++|||||++|+|.+++...                ..+++..+..++.||+.||.|||+++|+||||||+|||+   
T Consensus        91 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl---  167 (299)
T d1ywna1          91 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL---  167 (299)
T ss_dssp             SCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE---
T ss_pred             CeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeE---
Confidence            5689999999999999999753                248899999999999999999999999999999999999   


Q ss_pred             CCCCceEEeecccccccCCCC---ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhC-CCCCCCCCHHH-HH
Q 043828          219 SENSQLKAIDFGLSIFFKPGE---QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCG-VPPFWAETEEG-IA  292 (586)
Q Consensus       219 ~~~~~vkl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g-~~pf~~~~~~~-~~  292 (586)
                      +.++.+||+|||+|+......   ......||+.|+|||++. +.|+.++|||||||++|+|++| .+||.+..... ..
T Consensus       168 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~  247 (299)
T d1ywna1         168 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC  247 (299)
T ss_dssp             CGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHH
T ss_pred             CCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            567899999999998654332   223467999999999986 4689999999999999999986 56787655433 33


Q ss_pred             HHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          293 HAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       293 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ..+..+. .++  ..+.+++++++||.+||+.||.+|||++|+++|
T Consensus       248 ~~~~~~~-~~~--~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         248 RRLKEGT-RMR--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             HHHHHTC-CCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhcCC-CCC--CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            4444443 222  224689999999999999999999999999987

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-49  Score=383.19  Aligned_cols=243  Identities=22%  Similarity=0.325  Sum_probs=202.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe-CCeEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED-KDAIY  158 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~-~~~~~  158 (586)
                      .++|++++.||+|+||.||+|..  +|..||||++..+.     ..+.+.+|+.+++++ +|||||++++++.+ .+.+|
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~~-----~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~~   77 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLY   77 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC-------HHHHHTHHHHTTC-CCTTBCCEEEEECCC--CCE
T ss_pred             HHHeEEeEEEecCCCeEEEEEEE--CCeEEEEEEECcHH-----HHHHHHHHHHHHHhC-CCCCEeeEEEEEEecCCcEE
Confidence            46899999999999999999986  57899999986542     346789999999999 89999999998854 56789


Q ss_pred             EEEeccCCCChHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccC
Q 043828          159 LVMELCEGGELFDRIVNK--GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~  236 (586)
                      |||||+++|+|.+++...  ..+++..+..++.||+.||.|||+++|+||||||+|||+   +.++.+||+|||+++...
T Consensus        78 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~---~~~~~~kl~dfg~s~~~~  154 (262)
T d1byga_          78 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SEDNVAKVSDFGLTKEAS  154 (262)
T ss_dssp             EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTSCEEECCCCC-----
T ss_pred             EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhhee---cCCCCEeecccccceecC
Confidence            999999999999998654  358999999999999999999999999999999999999   678899999999998754


Q ss_pred             CCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCccCCCCCCCCCCCHHH
Q 043828          237 PGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIAHAIIRGKIDFERDPWPKVSKEA  314 (586)
Q Consensus       237 ~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  314 (586)
                      ..  .....+|+.|+|||++. +.++.++|||||||++|||+| |.+||...+..++...+.++... +  ..+.+++.+
T Consensus       155 ~~--~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~-~--~~~~~~~~~  229 (262)
T d1byga_         155 ST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM-D--APDGCPPAV  229 (262)
T ss_dssp             ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCC-C--CCTTCCHHH
T ss_pred             CC--CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCC-C--CCccCCHHH
Confidence            33  23457899999999986 579999999999999999998 79999888888888877655322 2  224688999


Q ss_pred             HHHHHHccCCCCCCCCCHHHHhcC
Q 043828          315 KELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       315 ~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      .+||.+||..||.+|||+.+++++
T Consensus       230 ~~li~~cl~~dP~~Rps~~~l~~~  253 (262)
T d1byga_         230 YEVMKNCWHLDAAMRPSFLQLREQ  253 (262)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHcccCHhHCcCHHHHHHH
Confidence            999999999999999999999874

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=8.3e-49  Score=388.77  Aligned_cols=249  Identities=22%  Similarity=0.293  Sum_probs=214.0

Q ss_pred             ccCeeecceeccCCceEEEEEEEc-----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEI-----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      .++|++++.||+|+||+||+|+..     .+++.||||++....  .....+.+.+|+.+|+++ +||||+++++++...
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~   88 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEF-DNPNIVKLLGVCAVG   88 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTC-CCTTBCCEEEEECSS
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc--ChHHHHHHHHHHHHHHhc-CCCCcccceeeeccC
Confidence            468999999999999999999875     356789999986543  233456799999999999 999999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhCC------------------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCC
Q 043828          155 DAIYLVMELCEGGELFDRIVNKG------------------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKP  210 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~~------------------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp  210 (586)
                      +..++||||+++|+|.+++....                        .+++..+..++.|++.||+|||+++||||||||
T Consensus        89 ~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp  168 (301)
T d1lufa_          89 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLAT  168 (301)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             CceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcc
Confidence            99999999999999999986432                        378899999999999999999999999999999


Q ss_pred             CceEeecCCCCCceEEeecccccccCCCC---ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCC-CCCCC
Q 043828          211 ENFLFADGSENSQLKAIDFGLSIFFKPGE---QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGV-PPFWA  285 (586)
Q Consensus       211 ~Nill~~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~-~pf~~  285 (586)
                      +|||+   +.++.+||+|||+|+......   ......||+.|+|||++.+ .|+.++|||||||++|||++|. +||.+
T Consensus       169 ~NILl---d~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~  245 (301)
T d1lufa_         169 RNCLV---GENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG  245 (301)
T ss_dssp             GGEEE---CGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             cceEE---CCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCC
Confidence            99999   567899999999998654332   2334678999999999874 7999999999999999999985 78999


Q ss_pred             CCHHHHHHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          286 ETEEGIAHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       286 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      .+..++...+..+....   ....+++++.+||.+||+.||++|||+.||++
T Consensus       246 ~~~~e~~~~v~~~~~~~---~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         246 MAHEEVIYYVRDGNILA---CPENCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             SCHHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCHHHHHHHHHcCCCCC---CCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            99999988888776422   22468999999999999999999999999965

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-48  Score=386.52  Aligned_cols=250  Identities=25%  Similarity=0.410  Sum_probs=210.7

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCC-------cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETG-------ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYE  152 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~-------~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~  152 (586)
                      .++|++++.||+|+||.||+|++..++       ..||||++.+..  .......+.+|...+.++.+|||||++++++.
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~   89 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACT   89 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc--ChHHHHHHHHHHHHHHHhcCCCeEEecccccc
Confidence            479999999999999999999876544       479999987654  23345678889999999878999999999999


Q ss_pred             eCCeEEEEEeccCCCChHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEee
Q 043828          153 DKDAIYLVMELCEGGELFDRIVNK----------------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFA  216 (586)
Q Consensus       153 ~~~~~~iv~E~~~gg~L~~~l~~~----------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~  216 (586)
                      +++.+|+|||||++|+|.+++...                ..+++..+..++.||+.||.|||+++||||||||+|||+ 
T Consensus        90 ~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl-  168 (299)
T d1fgka_          90 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV-  168 (299)
T ss_dssp             SSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE-
T ss_pred             cCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceee-
Confidence            999999999999999999999754                348999999999999999999999999999999999999 


Q ss_pred             cCCCCCceEEeecccccccCCCC---ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHH
Q 043828          217 DGSENSQLKAIDFGLSIFFKPGE---QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGI  291 (586)
Q Consensus       217 ~~~~~~~vkl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~  291 (586)
                        +.++.+||+|||++.......   ......||+.|+|||++. +.|+.++|||||||++|+|++ |.+||.+.+...+
T Consensus       169 --~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~  246 (299)
T d1fgka_         169 --TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL  246 (299)
T ss_dssp             --CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred             --cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHH
Confidence              677899999999998764332   234467899999999986 579999999999999999998 7999999988888


Q ss_pred             HHHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          292 AHAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       292 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ...+..+.. ++.  ...+++.+.+||.+||+.||.+|||+.||++
T Consensus       247 ~~~i~~~~~-~~~--p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         247 FKLLKEGHR-MDK--PSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             HHHHHTTCC-CCC--CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHcCCC-CCC--CccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            877766532 222  2468999999999999999999999999986

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-48  Score=386.08  Aligned_cols=250  Identities=22%  Similarity=0.343  Sum_probs=211.3

Q ss_pred             cCeeecceeccCCceEEEEEEEc-----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC
Q 043828           81 DKYTFGKELGRGEFGITHQCFEI-----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD  155 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~  155 (586)
                      ++|++++.||+|+||.||+|++.     .+++.||||++.+..  .......+.+|+.+++++.+|||||++++++.+..
T Consensus        23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~  100 (311)
T d1t46a_          23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG  100 (311)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc--CHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCC
Confidence            68999999999999999999863     466789999997653  23445678899999999978999999999999999


Q ss_pred             eEEEEEeccCCCChHHHHHhCC------------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeec
Q 043828          156 AIYLVMELCEGGELFDRIVNKG------------------HYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFAD  217 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~------------------~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~  217 (586)
                      .+|||||||++|+|.+++....                  .+++..+..++.||+.||.|||+++|+||||||+||++  
T Consensus       101 ~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~--  178 (311)
T d1t46a_         101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL--  178 (311)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE--
T ss_pred             EEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccc--
Confidence            9999999999999999987543                  58999999999999999999999999999999999999  


Q ss_pred             CCCCCceEEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhh-CCCCCCCCCHHHHH
Q 043828          218 GSENSQLKAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLC-GVPPFWAETEEGIA  292 (586)
Q Consensus       218 ~~~~~~vkl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~  292 (586)
                       +..+.+||+|||.++.......   .....||+.|+|||++. +.++.++|||||||++|+|+| |.+||...+..+.+
T Consensus       179 -~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~  257 (311)
T d1t46a_         179 -THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF  257 (311)
T ss_dssp             -ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred             -cccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHH
Confidence             5678999999999987654322   23467899999999987 568999999999999999998 66667666655555


Q ss_pred             HHHHhCccCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          293 HAIIRGKIDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       293 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ..+.........  ...+++.+.+||.+||+.||.+|||+.+|++
T Consensus       258 ~~~i~~~~~~~~--~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         258 YKMIKEGFRMLS--PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             HHHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHhcCCCCCC--cccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            555444333322  2467899999999999999999999999986

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-48  Score=382.10  Aligned_cols=249  Identities=20%  Similarity=0.274  Sum_probs=214.5

Q ss_pred             ccCeeecceeccCCceEEEEEEEc-----cCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeC
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEI-----ETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDK  154 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~  154 (586)
                      .++|++++.||+|+||+||+|.+.     .++..||||++....  .......+.+|+.+++++ +|||||++++++..+
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~--~~~~~~~~~~E~~il~~l-~h~nIv~~~~~~~~~   95 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQG   95 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGC-CCTTBCCEEEEECSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc--ChHHHHHHHHHHHHHHHc-CCCCEeeeeeEEecC
Confidence            478999999999999999999875     245789999987543  333456789999999999 899999999999999


Q ss_pred             CeEEEEEeccCCCChHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCce
Q 043828          155 DAIYLVMELCEGGELFDRIVNK----------GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQL  224 (586)
Q Consensus       155 ~~~~iv~E~~~gg~L~~~l~~~----------~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~v  224 (586)
                      ..+++|||||++|+|.+++...          ..+++..+..++.|++.||.|||+++|+||||||+|||+   +.++++
T Consensus        96 ~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLl---d~~~~~  172 (308)
T d1p4oa_          96 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV---AEDFTV  172 (308)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE---CTTCCE
T ss_pred             CceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceee---cCCceE
Confidence            9999999999999999988642          247889999999999999999999999999999999999   678899


Q ss_pred             EEeecccccccCCCCc---eecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhC-CCCCCCCCHHHHHHHHHhCc
Q 043828          225 KAIDFGLSIFFKPGEQ---FCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCG-VPPFWAETEEGIAHAIIRGK  299 (586)
Q Consensus       225 kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g-~~pf~~~~~~~~~~~i~~~~  299 (586)
                      ||+|||+|+.......   .....||+.|+|||.+. +.++.++|||||||++|||+|| .+||.+.+..+....+..+.
T Consensus       173 Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~  252 (308)
T d1p4oa_         173 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG  252 (308)
T ss_dssp             EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTC
T ss_pred             EEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCC
Confidence            9999999986643322   23346899999999987 4688899999999999999998 58898999999888888765


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          300 IDFERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       300 ~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ...   ..+.+++.+.+||.+||+.||.+|||+.+|++
T Consensus       253 ~~~---~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~  287 (308)
T d1p4oa_         253 LLD---KPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS  287 (308)
T ss_dssp             CCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCC---CcccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            422   22468899999999999999999999999997

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.8e-47  Score=377.08  Aligned_cols=259  Identities=18%  Similarity=0.252  Sum_probs=206.2

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      +.++|++++.||+|+||+||+|++..+|+.||||++......     ..+..|+++++.+..|++|+.+..++.+.+.++
T Consensus         5 vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~   79 (299)
T d1ckia_           5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV   79 (299)
T ss_dssp             ETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS-----CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEE
T ss_pred             ECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC-----HHHHHHHHHHHHccCCCcccEEEEEEecCCEEE
Confidence            346899999999999999999999999999999998765322     347889999999955566777888888999999


Q ss_pred             EEEeccCCCChHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          159 LVMELCEGGELFDRIV-NKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      +|||||. ++|...+. ....+++..+..++.|++.||.|||++||+||||||+|||+...+.+..+||+|||+|+....
T Consensus        80 ivme~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~  158 (299)
T d1ckia_          80 MVMELLG-PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD  158 (299)
T ss_dssp             EEEECCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBC
T ss_pred             EEEEEcC-CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccc
Confidence            9999995 56655554 456799999999999999999999999999999999999986545667899999999987653


Q ss_pred             CC--------ceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHH---hCccCCC-C
Q 043828          238 GE--------QFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAETEEGIAHAII---RGKIDFE-R  304 (586)
Q Consensus       238 ~~--------~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~---~~~~~~~-~  304 (586)
                      ..        ......||+.|+|||++.+ .|+.++|||||||++|+|++|..||...........+.   ......+ .
T Consensus       159 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (299)
T d1ckia_         159 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE  238 (299)
T ss_dssp             TTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHH
T ss_pred             cccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChh
Confidence            32        2345689999999999875 68999999999999999999999998765544332221   1111111 1


Q ss_pred             CCCCCCCHHHHHHHHHccCCCCCCCCCHH---HHhcCCCccC
Q 043828          305 DPWPKVSKEAKELVKNMLDPNPYNRLTLE---EVLENPWIKN  343 (586)
Q Consensus       305 ~~~~~~~~~~~~li~~~L~~dp~~Rps~~---eil~hp~~~~  343 (586)
                      ...+.+|+++.+||.+||+.||++||++.   ++|+|+|.+.
T Consensus       239 ~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~  280 (299)
T d1ckia_         239 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  280 (299)
T ss_dssp             HHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             HhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHc
Confidence            12346899999999999999999999987   4567777653

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-46  Score=373.11  Aligned_cols=247  Identities=21%  Similarity=0.313  Sum_probs=201.6

Q ss_pred             eeecceeccCCceEEEEEEEccCC---cEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEe-CCeEE
Q 043828           83 YTFGKELGRGEFGITHQCFEIETG---ETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYED-KDAIY  158 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~---~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~-~~~~~  158 (586)
                      +.+.++||+|+||+||+|++..++   ..||||++.+.  ......+.+.+|+.+|+++ +|||||++++++.. ++.++
T Consensus        29 ~~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~~E~~~l~~l-~HpnIv~~~g~~~~~~~~~~  105 (311)
T d1r0pa_          29 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDF-SHPNVLSLLGICLRSEGSPL  105 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEECC----CEEEEEEEECCC--CCHHHHHHHHHHHHHHHTC-CCTTBCCCCEEEEETTTEEE
T ss_pred             eccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcc--cCHHHHHHHHHHHHHHHhC-CCCCEeEEeEEEEecCCceE
Confidence            344678999999999999876543   35899998643  2444567899999999999 89999999999765 56899


Q ss_pred             EEEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEeecccccccCC
Q 043828          159 LVMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAIDFGLSIFFKP  237 (586)
Q Consensus       159 iv~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~~~~  237 (586)
                      +|||||++|+|.+++... ..+++..+..++.|++.||.|||+.+|+||||||+|||+   +.++.+||+|||+++....
T Consensus       106 lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl---~~~~~~kL~DFG~~~~~~~  182 (311)
T d1r0pa_         106 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML---DEKFTVKVADFGLARDMYD  182 (311)
T ss_dssp             EEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---CTTCCEEECSSGGGCCTTT
T ss_pred             EEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeE---CCCCCEEEecccchhhccc
Confidence            999999999999988754 457788899999999999999999999999999999999   6778999999999987643


Q ss_pred             CC-----ceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCC-CHHHHHHHHHhCccCCCCCCCCCC
Q 043828          238 GE-----QFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAE-TEEGIAHAIIRGKIDFERDPWPKV  310 (586)
Q Consensus       238 ~~-----~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~  310 (586)
                      ..     ......||+.|+|||.+. +.++.++||||||+++|||++|..||... +..++...+..+.... .  .+.+
T Consensus       183 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~-~--p~~~  259 (311)
T d1r0pa_         183 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL-Q--PEYC  259 (311)
T ss_dssp             TTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCC-C--CTTC
T ss_pred             cccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC-C--cccC
Confidence            32     122356899999999986 57899999999999999999977777553 4445556666654322 2  2467


Q ss_pred             CHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          311 SKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       311 ~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                      ++.+.+||.+||..||++|||+.||++|
T Consensus       260 ~~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         260 PDPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            8999999999999999999999999987

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=9.1e-46  Score=365.16  Aligned_cols=252  Identities=19%  Similarity=0.239  Sum_probs=207.1

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEEE
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~i  159 (586)
                      .++|++++.||+|+||+||+|++..+|+.||||++......     ..+.+|+++++.|.+|+||+.+++++......|+
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-----~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~   78 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA-----PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL   78 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS-----CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCc-----HHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEE
Confidence            46899999999999999999999999999999998654322     3467899999999777999999999999999999


Q ss_pred             EEeccCCCChHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecC--CCCCceEEeecccccccC
Q 043828          160 VMELCEGGELFDRIVNK-GHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADG--SENSQLKAIDFGLSIFFK  236 (586)
Q Consensus       160 v~E~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~--~~~~~vkl~Dfg~a~~~~  236 (586)
                      ||||| +++|.+++... ..++...+..++.|++.||.|||++||+||||||+|||++..  ...+.+||+|||+|+...
T Consensus        79 vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~  157 (293)
T d1csna_          79 VIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR  157 (293)
T ss_dssp             EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred             EEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcc
Confidence            99999 78998888764 469999999999999999999999999999999999999642  235789999999998754


Q ss_pred             CC--------CceecccCCccccchhhhhc-cCCCcchHHHHHHHHHHHhhCCCCCCCCC---HHHHHHHHHhCccCCC-
Q 043828          237 PG--------EQFCEIVGSPYYMAPEVLRR-NYGPEIDVWSAGVIIYILLCGVPPFWAET---EEGIAHAIIRGKIDFE-  303 (586)
Q Consensus       237 ~~--------~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~---~~~~~~~i~~~~~~~~-  303 (586)
                      ..        ......+||+.|||||++.+ .++.++|||||||++|+|++|..||.+..   .......+.......+ 
T Consensus       158 ~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~  237 (293)
T d1csna_         158 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL  237 (293)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH
T ss_pred             cCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCCh
Confidence            32        12335689999999999875 68999999999999999999999997543   3333333332222111 


Q ss_pred             CCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHhc
Q 043828          304 RDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVLE  337 (586)
Q Consensus       304 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil~  337 (586)
                      ....+.+|+++.+++..|+..+|++||+++.+.+
T Consensus       238 ~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~  271 (293)
T d1csna_         238 RELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  271 (293)
T ss_dssp             HHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence            1123468899999999999999999999877654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-46  Score=368.34  Aligned_cols=248  Identities=21%  Similarity=0.271  Sum_probs=191.5

Q ss_pred             ccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCC----
Q 043828           80 LDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKD----  155 (586)
Q Consensus        80 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~----  155 (586)
                      .++|.+.+.||+|+||+||+|+.  +|+.||||++.....    .......|+..+..+ +|||||++++++.+.+    
T Consensus         2 ~~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~~----~~~~~e~ei~~~~~~-~HpnIv~~~~~~~~~~~~~~   74 (303)
T d1vjya_           2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE----RSWFREAEIYQTVML-RHENILGFIAADNKDNGTWT   74 (303)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGGH----HHHHHHHHHHTSTTC-CCTTBCCEEEEEEEECSSSE
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch----hHHHHHHHHHHHhhC-CCCcCcceEEEEEeCCCcce
Confidence            46799999999999999999975  789999999865421    112233455555667 8999999999997654    


Q ss_pred             eEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH--------cCceeccCCCCceEeecCCCCCceEEe
Q 043828          156 AIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHE--------NGVMHRDLKPENFLFADGSENSQLKAI  227 (586)
Q Consensus       156 ~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~--------~~ivHrDlkp~Nill~~~~~~~~vkl~  227 (586)
                      .+|+|||||++|+|.+++.+. .+++..+..++.|++.||.|||+        +||+||||||+|||+   +.++.+||+
T Consensus        75 ~~~lv~Ey~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl---~~~~~~Kl~  150 (303)
T d1vjya_          75 QLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---KKNGTCCIA  150 (303)
T ss_dssp             EEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEE---CTTSCEEEC
T ss_pred             EEEEEEecccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEE---cCCCCeEEE
Confidence            689999999999999999765 68999999999999999999996        599999999999999   677899999


Q ss_pred             ecccccccCCCC-----ceecccCCccccchhhhhcc-------CCCcchHHHHHHHHHHHhhCCCCCCC----------
Q 043828          228 DFGLSIFFKPGE-----QFCEIVGSPYYMAPEVLRRN-------YGPEIDVWSAGVIIYILLCGVPPFWA----------  285 (586)
Q Consensus       228 Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~l~~~-------~~~~~DiwslG~il~~ll~g~~pf~~----------  285 (586)
                      |||++.......     .....+||+.|+|||++...       ++.++|||||||+||||+||.+||..          
T Consensus       151 DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~  230 (303)
T d1vjya_         151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD  230 (303)
T ss_dssp             CCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTT
T ss_pred             ecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhh
Confidence            999998765432     22346899999999998642       56689999999999999999887632          


Q ss_pred             -----CCHHHHHHHHHhCccCCCCCC-C--CCCCHHHHHHHHHccCCCCCCCCCHHHHhcC
Q 043828          286 -----ETEEGIAHAIIRGKIDFERDP-W--PKVSKEAKELVKNMLDPNPYNRLTLEEVLEN  338 (586)
Q Consensus       286 -----~~~~~~~~~i~~~~~~~~~~~-~--~~~~~~~~~li~~~L~~dp~~Rps~~eil~h  338 (586)
                           .........+.......+.+. +  ......+.+|+.+||+.||.+|||+.||+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~  291 (303)
T d1vjya_         231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             TSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             cccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence                 122333333333332211111 0  1122458999999999999999999999873

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.5e-43  Score=361.37  Aligned_cols=259  Identities=21%  Similarity=0.383  Sum_probs=195.8

Q ss_pred             cCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCC----------CCCCeeEEEEE
Q 043828           81 DKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLP----------KHPNIVTYKEA  150 (586)
Q Consensus        81 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~----------~hpnIv~l~~~  150 (586)
                      ++|+++++||+|+||+||+|++..+|+.||||++.+..    ...+.+.+|+.+++.+.          .||||++++++
T Consensus        13 ~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~----~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~   88 (362)
T d1q8ya_          13 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH   88 (362)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred             CcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc----cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEE
Confidence            36999999999999999999999999999999997543    22356788999988872          35889999988


Q ss_pred             EEe--CCeEEEEEeccCCCChHHHH---HhCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCceEeecCC---CC
Q 043828          151 YED--KDAIYLVMELCEGGELFDRI---VNKGHYTERAAAAVGKTILRIVKVCHE-NGVMHRDLKPENFLFADGS---EN  221 (586)
Q Consensus       151 ~~~--~~~~~iv~E~~~gg~L~~~l---~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~ivHrDlkp~Nill~~~~---~~  221 (586)
                      +..  ....+++++++..+......   .....+++..++.++.||+.||.|||+ .||+||||||+|||+...+   ..
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~  168 (362)
T d1q8ya_          89 FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENL  168 (362)
T ss_dssp             EEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTE
T ss_pred             eeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCccccc
Confidence            764  46677777777655433222   234578999999999999999999998 8999999999999995321   12


Q ss_pred             CceEEeecccccccCCCCceecccCCccccchhhhh-ccCCCcchHHHHHHHHHHHhhCCCCCCCCCHH------HHHHH
Q 043828          222 SQLKAIDFGLSIFFKPGEQFCEIVGSPYYMAPEVLR-RNYGPEIDVWSAGVIIYILLCGVPPFWAETEE------GIAHA  294 (586)
Q Consensus       222 ~~vkl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~  294 (586)
                      ..++++|||.+.....  .....+||+.|+|||++. ..|+.++||||+||++++|++|..||......      .....
T Consensus       169 ~~~kl~dfg~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~  246 (362)
T d1q8ya_         169 IQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ  246 (362)
T ss_dssp             EEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHH
T ss_pred             ceeeEeeccccccccc--ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHH
Confidence            3599999999876432  334568999999999886 56899999999999999999999999654321      11111


Q ss_pred             HHh--Ccc----------------------CC--------------CCCCCCCCCHHHHHHHHHccCCCCCCCCCHHHHh
Q 043828          295 IIR--GKI----------------------DF--------------ERDPWPKVSKEAKELVKNMLDPNPYNRLTLEEVL  336 (586)
Q Consensus       295 i~~--~~~----------------------~~--------------~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~eil  336 (586)
                      ...  +..                      ..              ....+...++.+++||.+||..||.+|||++|+|
T Consensus       247 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L  326 (362)
T d1q8ya_         247 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLV  326 (362)
T ss_dssp             HHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHH
T ss_pred             HHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence            110  000                      00              0001122457899999999999999999999999


Q ss_pred             cCCCccCCC
Q 043828          337 ENPWIKNDN  345 (586)
Q Consensus       337 ~hp~~~~~~  345 (586)
                      +||||+...
T Consensus       327 ~Hp~f~~~~  335 (362)
T d1q8ya_         327 NHPWLKDTL  335 (362)
T ss_dssp             TCGGGTTCT
T ss_pred             cCcccCCCC
Confidence            999999653

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=99.92  E-value=1.3e-24  Score=197.05  Aligned_cols=161  Identities=20%  Similarity=0.357  Sum_probs=147.2

Q ss_pred             hhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHH
Q 043828          384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQ  463 (586)
Q Consensus       384 ~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~  463 (586)
                      ++.++++++|+.+|.|++|+|+.+||..+|+.+|..++..+++.+++.+|.|++|.|+|.||+..+...      ..+++
T Consensus        15 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~~------~~~~~   88 (182)
T d1y1xa_          15 NDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI------LSMRE   88 (182)
T ss_dssp             CTTSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHH
T ss_pred             CcHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHhcccCchhhhhhhhccccccccccccccccccccccc------ccccc
Confidence            344689999999999999999999999999999999999999999999999999999999998865432      45889


Q ss_pred             HHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhhhhhccCcc
Q 043828          464 AFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSAL  543 (586)
Q Consensus       464 ~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i  543 (586)
                      +|+.+|.+++|+|+.+||..+|..+|...+ +++++.+++.+|.|+||.|+|+||+.++.....++++|+.+|.+++|+|
T Consensus        89 ~F~~~D~~~~g~I~~~el~~~l~~~g~~ls-~~e~~~i~~~~d~~~dg~I~~~eF~~~~~~l~~~~~~F~~~D~~~~G~i  167 (182)
T d1y1xa_          89 GFRKRDSSGDGRLDSNEVRAALLSSGYQVS-EQTFQALMRKFDRQRRGSLGFDDYVELSIFVCRVRNVFAFYDRERTGQV  167 (182)
T ss_dssp             HHHHHCTTSSSCBCHHHHHHHHHTTSCCCC-HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHCTTCCSEE
T ss_pred             chhccccccchhhhhHHHHHHHHHhCCchh-HHHHHHHHhhcccCCCCCcCHHHHHHHHHHHHHHHHHHHHhCCCCCCcE
Confidence            999999999999999999999999988776 8999999999999999999999999999888889999999999999997


Q ss_pred             c--HHHHHHH
Q 043828          544 S--IKLFKDK  551 (586)
Q Consensus       544 ~--~~el~~~  551 (586)
                      +  .+|+...
T Consensus       168 s~~~~~f~~~  177 (182)
T d1y1xa_         168 TFTFDTFIGG  177 (182)
T ss_dssp             EEEHHHHHHH
T ss_pred             EeeHHHHHHH
Confidence            5  5677654

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=2.2e-24  Score=195.31  Aligned_cols=162  Identities=19%  Similarity=0.252  Sum_probs=144.9

Q ss_pred             hhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCC-CCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHH
Q 043828          383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQK-VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDIL  461 (586)
Q Consensus       383 ~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~  461 (586)
                      ..+.+.|..+|+.+|.|++|+||.+||..+|+.++.. .+.++++.++..+|.|++|.|+|+||+.++...      ..+
T Consensus        15 ~~~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~~------~~~   88 (181)
T d1hqva_          15 LPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI------TDW   88 (181)
T ss_dssp             CSCHHHHHHHHHHHCTTCCSSBCHHHHHHHCCCSSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHHH------HHH
T ss_pred             CccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCcccHHHHHHHhhccccccccchhhhHHHhhhhhc------ccc
Confidence            3455789999999999999999999999999988754 688999999999999999999999999876543      358


Q ss_pred             HHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhhhhhccC
Q 043828          462 SQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMS  541 (586)
Q Consensus       462 ~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G  541 (586)
                      +.+|+.+|.+++|.|+.+||+.++...+.... ++++..++..+|.+++|.|+|+||+.++...+.+.+.|+.+|++++|
T Consensus        89 ~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~-~e~~~~~~~~~d~~~dg~Is~~eF~~~~~~l~~l~~~F~~~D~~~dG  167 (181)
T d1hqva_          89 QNVFRTYDRDNSGMIDKNELKQALSGFGYRLS-DQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDG  167 (181)
T ss_dssp             HHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCC-HHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHHHHHCTTCSS
T ss_pred             ccccccccccccchhhhHHHHHHHHHcCCcch-hHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence            89999999999999999999999999987766 89999999999999999999999999998888999999999999999


Q ss_pred             ccc--HHHHHHH
Q 043828          542 ALS--IKLFKDK  551 (586)
Q Consensus       542 ~i~--~~el~~~  551 (586)
                      .|+  .+|+..+
T Consensus       168 ~i~~~~~ef~~~  179 (181)
T d1hqva_         168 WIQVSYEQYLSM  179 (181)
T ss_dssp             CCCCCHHHHHHH
T ss_pred             CEEecHHHHHHH
Confidence            775  4555443

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.6e-24  Score=190.33  Aligned_cols=154  Identities=19%  Similarity=0.265  Sum_probs=136.6

Q ss_pred             HHHhhhhccCCCCCCcCHHHHHHHHHhcCCCC-----CHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHH
Q 043828          389 IKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV-----SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQ  463 (586)
Q Consensus       389 ~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~-----~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~  463 (586)
                      +..+|..+ .++||.|+.+||+.+|+.+|.+.     +.+.++.++..+|.|++|.|+|+||+.++...      +.++.
T Consensus         2 ~~~~F~~~-a~~dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~~------~~~~~   74 (165)
T d1k94a_           2 VYTYFSAV-AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKE   74 (165)
T ss_dssp             HHHHHHHH-HGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHH
T ss_pred             hHHHHHHh-cCCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhcc------chhHH
Confidence            35667777 67899999999999999987654     56789999999999999999999999876543      46899


Q ss_pred             HHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhhhhhccCcc
Q 043828          464 AFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRAMMSAL  543 (586)
Q Consensus       464 ~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i  543 (586)
                      +|+.||+|++|+|+.+||+.+|..+|...+ +++++.++..+|.  +|.|+|+||+.++...+.+.++|+.+|+|++|+|
T Consensus        75 ~F~~fD~d~sG~I~~~El~~~l~~~G~~l~-~~~~~~l~~~~d~--~g~i~~~eFi~~~~~l~~~~~~F~~~D~d~~G~i  151 (165)
T d1k94a_          75 NFMTVDQDGSGTVEHHELRQAIGLMGYRLS-PQTLTTIVKRYSK--NGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSA  151 (165)
T ss_dssp             HHHHHCTTCCSBCCHHHHHHHHHHTTCCCC-HHHHHHHHHHHCB--TTBCBHHHHHHHHHHHHHHHHHHHTTCTTCCSEE
T ss_pred             HHHHhCCCCCCeEcHHHHHHHHHHhhhcCC-HHHHHHHHHHcCC--CCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCcE
Confidence            999999999999999999999999999877 8899999999975  5899999999999888899999999999999988


Q ss_pred             --cHHHHHHHH
Q 043828          544 --SIKLFKDKS  552 (586)
Q Consensus       544 --~~~el~~~~  552 (586)
                        +.+|+....
T Consensus       152 ~l~~~ef~~~~  162 (165)
T d1k94a_         152 NFIYDDFLQGT  162 (165)
T ss_dssp             EEEHHHHHHHH
T ss_pred             EecHHHHHHHH
Confidence              568887654

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.91  E-value=4.2e-25  Score=202.29  Aligned_cols=166  Identities=22%  Similarity=0.227  Sum_probs=122.8

Q ss_pred             eeecceeccCCceEEEEEEEccCCcEEEEEEeeccccC-----C----------hhcHHHHHHHHHHHHhCCCCCCeeEE
Q 043828           83 YTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLK-----T----------EIDIDDVRREVEIMRHLPKHPNIVTY  147 (586)
Q Consensus        83 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~-----~----------~~~~~~~~~Ei~~l~~l~~hpnIv~l  147 (586)
                      |.++++||+|+||+||+|++ .+|+.||||+++.....     .          ........+|...+.++ .|++++..
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~-~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~v~~~   79 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL-QGLAVPKV   79 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT-TTSSSCCE
T ss_pred             chhCCEeeeCcceEEEEEEC-CCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHc-cCCCcceE
Confidence            56889999999999999987 47899999987532111     0          01123445788999999 89999998


Q ss_pred             EEEEEeCCeEEEEEeccCCCChHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCceEeecCCCCCceEEe
Q 043828          148 KEAYEDKDAIYLVMELCEGGELFDRIVNKGHYTERAAAAVGKTILRIVKVCHENGVMHRDLKPENFLFADGSENSQLKAI  227 (586)
Q Consensus       148 ~~~~~~~~~~~iv~E~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivHrDlkp~Nill~~~~~~~~vkl~  227 (586)
                      +++.  .  .+++|||+++..+..       ++...+..++.|++.+|.|||++||+||||||+|||+.   + ..++|+
T Consensus        80 ~~~~--~--~~lvme~~~~~~~~~-------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~---~-~~~~li  144 (191)
T d1zara2          80 YAWE--G--NAVLMELIDAKELYR-------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS---E-EGIWII  144 (191)
T ss_dssp             EEEE--T--TEEEEECCCCEEGGG-------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE---T-TEEEEC
T ss_pred             EEec--C--CEEEEEeeccccccc-------hhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeee---C-CCEEEE
Confidence            7653  2  279999998866532       45566778999999999999999999999999999995   2 358999


Q ss_pred             ecccccccCCCCceecccCCccccc------hhhhhccCCCcchHHHHHHH
Q 043828          228 DFGLSIFFKPGEQFCEIVGSPYYMA------PEVLRRNYGPEIDVWSAGVI  272 (586)
Q Consensus       228 Dfg~a~~~~~~~~~~~~~gt~~y~a------PE~l~~~~~~~~DiwslG~i  272 (586)
                      |||+|........       ..|..      .+.+.+.|+.++|+||+.--
T Consensus       145 DFG~a~~~~~~~~-------~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~  188 (191)
T d1zara2         145 DFPQSVEVGEEGW-------REILERDVRNIITYFSRTYRTEKDINSAIDR  188 (191)
T ss_dssp             CCTTCEETTSTTH-------HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred             ECCCcccCCCCCc-------HHHHHHHHHHHHHHHcCCCCCcccHHHHHHH
Confidence            9999976543221       11221      23345678999999997643

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=99.90  E-value=3.7e-24  Score=212.97  Aligned_cols=196  Identities=17%  Similarity=0.215  Sum_probs=178.1

Q ss_pred             cCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCch
Q 043828          379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGND  458 (586)
Q Consensus       379 ~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~  458 (586)
                      ..+..++...++++|..+|.|++|.|+.+||+.+|..+|..++..++..+|..+|.|++|.|+|.||+..+.....    
T Consensus       114 ~~l~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~----  189 (321)
T d1ij5a_         114 PMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAA----  189 (321)
T ss_dssp             CCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHT----
T ss_pred             ccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHcCCcccHHHHHHHHHHHhhcCCccccchhhhhhhhhhhh----
Confidence            3456778889999999999999999999999999999999999999999999999999999999999986654433    


Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhhhhh
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSRA  538 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d  538 (586)
                        +..+|+.+|.+++|.++..++...+...+...  ......++..++.+++|.+.+.+|.........+..+|..+|.|
T Consensus       190 --~~~~F~~~d~d~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d  265 (321)
T d1ij5a_         190 --LVADFRKIDTNSNGTLSRKEFREHFVRLGFDK--KSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFD  265 (321)
T ss_dssp             --SCCCHHHHCTTCCSEECHHHHHHHHHHTTCCC--HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred             --hhHHHHHHhhcccccchhHHHhhhhhcccccc--hHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcC
Confidence              33469999999999999999999999877653  66778899999999999999999999988888899999999999


Q ss_pred             ccCcccHHHHHHHHHhhcc-cCChhhHHHHHHhhccCCCceEecC
Q 043828          539 MMSALSIKLFKDKSMELTK-SMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       539 ~~G~i~~~el~~~~~~~g~-~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      ++|+|+.+||+.++..+|. .++++++..+++.+|.|+||+|+|.
T Consensus       266 ~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~  310 (321)
T d1ij5a_         266 KSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQ  310 (321)
T ss_dssp             SCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHH
T ss_pred             CCCCCcHHHHHHHHHHcCCCcCcHHHHHHHHHHhCCCCCCcCcHH
Confidence            9999999999999999997 5999999999999999999999975

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=9.8e-24  Score=189.41  Aligned_cols=161  Identities=19%  Similarity=0.287  Sum_probs=142.3

Q ss_pred             chhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCC-----CHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCC
Q 043828          382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV-----SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIG  456 (586)
Q Consensus       382 ~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~-----~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~  456 (586)
                      |.++...++..|..++ ++||.|+..||+.+|+.+|.++     +.++++.++..+|.|++|.|+|+||+.++...    
T Consensus         2 p~~~~~~~~~~F~~~~-~~dG~Is~~EL~~~L~~~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~----   76 (172)
T d1juoa_           2 PGQTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL----   76 (172)
T ss_dssp             TTCCCCTTHHHHHHHH-TTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH----
T ss_pred             CcchHHHHHHHHHHhC-CCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHHHhh----
Confidence            4566678999999997 7899999999999999987653     57889999999999999999999999876543    


Q ss_pred             chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhhh
Q 043828          457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYS  536 (586)
Q Consensus       457 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D  536 (586)
                        ..+..+|+.+|.|++|.|+.+|+..+|..+|.... +++++.+++.+|.  +|.|+|+||+.++.....++.+|+.+|
T Consensus        77 --~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls-~~~~~~l~~~~d~--~g~i~~~eF~~~~~~~~~~~~~f~~~D  151 (172)
T d1juoa_          77 --NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLS-PQAVNSIAKRYST--NGKITFDDYIACCVKLRALTDSFRRRD  151 (172)
T ss_dssp             --HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCC-HHHHHHHHHHTCS--SSSEEHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             --hhhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhh-HHHHHHHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHHhC
Confidence              44788999999999999999999999999998776 8899999999964  578999999999998899999999999


Q ss_pred             hhccCcccH--HHHHHHH
Q 043828          537 RAMMSALSI--KLFKDKS  552 (586)
Q Consensus       537 ~d~~G~i~~--~el~~~~  552 (586)
                      +|++|+|++  +|+..+.
T Consensus       152 ~d~~G~Itl~~~eFl~~~  169 (172)
T d1juoa_         152 TAQQGVVNFPYDDFIQCV  169 (172)
T ss_dssp             TTCCSEEEEEHHHHHHHH
T ss_pred             CCCCCcEEecHHHHHHHH
Confidence            999999854  7776654

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=99.90  E-value=1.7e-24  Score=195.86  Aligned_cols=155  Identities=20%  Similarity=0.233  Sum_probs=121.2

Q ss_pred             chhhH-hHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCC--------CCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh
Q 043828          382 PQDQM-AQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQK--------VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL  452 (586)
Q Consensus       382 ~~~~~-~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~--------~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~  452 (586)
                      +++++ +.++++|+.+| +++|.|+..||+.+|..++..        ++.+.++.++..+|.|++|.|+|+||..++...
T Consensus        14 s~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~e~~~~li~~~D~d~~G~i~~~EF~~l~~~~   92 (188)
T d1qxpa2          14 SEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRI   92 (188)
T ss_dssp             -------------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHc-CCCCEECHHHHHHHHHHhCccccccccccCCHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Confidence            44554 45899999999 558999999999998776443        456789999999999999999999999877543


Q ss_pred             ccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHH
Q 043828          453 KRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMAS  532 (586)
Q Consensus       453 ~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F  532 (586)
                            ..++.+|+.||+|++|+|+..||+.+|..+|.... .+.++.++.. |.|++|.|+|+||+.++.....+..+|
T Consensus        93 ------~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~-~~~~~~l~~~-~~~~dg~i~f~eFi~~~~~l~~~~~~F  164 (188)
T d1qxpa2          93 ------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLP-CQLHQVIVAR-FADDELIIDFDNFVRCLVRLEILFKIF  164 (188)
T ss_dssp             ------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECC-HHHHHHHHHH-TSCSSSBCCHHHHHHHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCC-HHHHHHHHHH-hcCCCCcCCHHHHHHHHHHHHHHHHHH
Confidence                  45899999999999999999999999999998876 6656555554 679999999999999998888899999


Q ss_pred             HhhhhhccCcccH
Q 043828          533 RQYSRAMMSALSI  545 (586)
Q Consensus       533 ~~~D~d~~G~i~~  545 (586)
                      +.+|++++|+|++
T Consensus       165 ~~~D~~~~G~i~l  177 (188)
T d1qxpa2         165 KQLDPENTGTIQL  177 (188)
T ss_dssp             HHSCSSCCSCEEE
T ss_pred             HHhCCCCCCeEEe
Confidence            9999999998855

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.90  E-value=1.3e-23  Score=188.96  Aligned_cols=158  Identities=16%  Similarity=0.261  Sum_probs=136.8

Q ss_pred             hhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCC--------CCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccC
Q 043828          384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQK--------VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRI  455 (586)
Q Consensus       384 ~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~--------~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~  455 (586)
                      +++++++++|..+|. +||.|+..||+.+|..+|..        ++.+.+..++..+|.|++|.|+|+||+.++...   
T Consensus         1 ee~~~~r~~F~~~d~-~dg~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~~~~---   76 (173)
T d1alva_           1 EEVRQFRRLFAQLAG-DDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI---   76 (173)
T ss_dssp             CHHHHHHHHHHHHHG-GGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH---
T ss_pred             ChHHHHHHHHHHHcC-CCCcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhhhhh---
Confidence            478899999999995 48999999999999887533        467889999999999999999999998876443   


Q ss_pred             CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhh
Q 043828          456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQY  535 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~  535 (586)
                         ..++.+|+.||.|++|.|+..||..+|...|...+ +++++.++ .+|.|++|.|+|+||+.++...+.+..+|+.|
T Consensus        77 ---~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~-~~~~~~~~-~~d~d~~G~i~~~EF~~~~~~~~~~~~~f~~~  151 (173)
T d1alva_          77 ---KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLN-EHLYSMII-RRYSDEGGNMDFDNFISCLVRLDAMFRAFKSL  151 (173)
T ss_dssp             ---HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCC-HHHHHHHH-HHHTCSSSCBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---hHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhH-HHHHHHhh-ccccCCCCeEeHHHHHHHHHHHHHHHHHHHHh
Confidence               45889999999999999999999999999998776 66665554 66779999999999999998888999999999


Q ss_pred             hhhccCcccH--HHHHH
Q 043828          536 SRAMMSALSI--KLFKD  550 (586)
Q Consensus       536 D~d~~G~i~~--~el~~  550 (586)
                      |+|++|.|+.  +|+..
T Consensus       152 D~d~~G~it~~~~efl~  168 (173)
T d1alva_         152 DKDGTGQIQVNIQEWLQ  168 (173)
T ss_dssp             SSSCCSEEEEEHHHHHH
T ss_pred             CCCCCCcEEecHHHHHH
Confidence            9999999964  45543

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=99.89  E-value=5.3e-24  Score=193.69  Aligned_cols=160  Identities=16%  Similarity=0.235  Sum_probs=137.8

Q ss_pred             chhhH-hHHHHhhhhccCCCCCCcCHHHHHHHHHhcCC--------CCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh
Q 043828          382 PQDQM-AQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQ--------KVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL  452 (586)
Q Consensus       382 ~~~~~-~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~--------~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~  452 (586)
                      +.+++ +.++++|..+| ++||.|+..||..+|..+|.        .++.+.+..++..+|.|++|.|+|+||+.++...
T Consensus        12 ~~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~~   90 (186)
T d1df0a1          12 NEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI   90 (186)
T ss_dssp             CCSCSCHHHHHHHHHHH-GGGTCEEHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHhcccccccccccCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhH
Confidence            33444 46899999999 89999999999999987643        3567889999999999999999999999876543


Q ss_pred             ccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHH
Q 043828          453 KRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMAS  532 (586)
Q Consensus       453 ~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F  532 (586)
                            ..++.+|+.+|+|++|+|+.+||..+|+.+|...+ .+ +.+++...|.|++|.|+|+||+.++...+.++.+|
T Consensus        91 ------~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~-~~-~~~~~~~~d~d~dg~I~f~eFi~~~~~l~~~~~~F  162 (186)
T d1df0a1          91 ------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLP-CQ-LHQVIVARFADDELIIDFDNFVRCLVRLEILFKIF  162 (186)
T ss_dssp             ------HHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECC-HH-HHHHHHHHHCCSTTEECHHHHHHHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhccc-HH-HHHHHHHHHcCCCCeEeHHHHHHHHHHHHHHHHHH
Confidence                  45899999999999999999999999999988776 55 45667779999999999999999999889999999


Q ss_pred             HhhhhhccCcccH--HHHHH
Q 043828          533 RQYSRAMMSALSI--KLFKD  550 (586)
Q Consensus       533 ~~~D~d~~G~i~~--~el~~  550 (586)
                      +.+|+|++|+|++  .|+..
T Consensus       163 ~~~D~~~~G~i~l~~~ef~~  182 (186)
T d1df0a1         163 KQLDPENTGTIQLDLISWLS  182 (186)
T ss_dssp             HHHCTTCCSEEEEEHHHHHH
T ss_pred             HHhCCCCCCcEEecHHHHHH
Confidence            9999999999855  44443

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=99.89  E-value=3.2e-23  Score=180.93  Aligned_cols=143  Identities=29%  Similarity=0.603  Sum_probs=131.1

Q ss_pred             CCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhc-cCCch
Q 043828          380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLK-RIGND  458 (586)
Q Consensus       380 ~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-~~~~~  458 (586)
                      +++++++++++++|..+|.+++|+|+.+||..++...+..++...+..+++.+|.+++|.|+|+||+..+.... .....
T Consensus         2 ~lt~~e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~   81 (146)
T d1exra_           2 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSE   81 (146)
T ss_dssp             CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChH
Confidence            57788999999999999999999999999999999999999999999999999999999999999998654332 23346


Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      +.++.+|+.+|.|++|.|+..||..++..+|...+ ++++..+|+.+|.|+||.|+|+||++++.
T Consensus        82 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~-~~~~~~i~~~~D~d~dG~i~~~eF~~~l~  145 (146)
T d1exra_          82 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLT-DDEVDEMIREADIDGDGHINYEEFVRMMV  145 (146)
T ss_dssp             HHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCC-HHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCC-HHHHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence            78999999999999999999999999999998776 89999999999999999999999999875

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.89  E-value=6.1e-23  Score=177.93  Aligned_cols=138  Identities=22%  Similarity=0.492  Sum_probs=125.4

Q ss_pred             CchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh-hccCCchh
Q 043828          381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH-LKRIGNDD  459 (586)
Q Consensus       381 l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~-~~~~~~~~  459 (586)
                      ++++|+++++++|..+|.|++|.|+..||..+|+.+|.+++..++..++.    +++|.|+|+||+.++.. ......++
T Consensus         1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~el~~~~~----~~~~~i~~~eF~~~~~~~~~~~~~~~   76 (142)
T d1wdcb_           1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTDSEE   76 (142)
T ss_dssp             CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCCCHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCCHHHHHHHHH----hccCccccccccccccccccccchhh
Confidence            47889999999999999999999999999999999999999999998885    67899999999996554 44455678


Q ss_pred             HHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          460 ILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       460 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      .++.+|+.||+|++|+|+.+||+.+|..+|...+ ++++.++++.+|.| +|+|+|+||+++|..
T Consensus        77 ~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt-~~e~~~l~~~~d~~-~G~I~y~eF~~~l~~  139 (142)
T d1wdcb_          77 TIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFN-KDEMRMTFKEAPVE-GGKFDYVKFTAMIKG  139 (142)
T ss_dssp             HHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCC-HHHHHHHHHHCCEE-TTEECHHHHHHHHHT
T ss_pred             hHHHhhhhhcccCCCcccHHHHHHHHHHccccCC-HHHHHHHHHHhCCC-CCEEcHHHHHHHHhc
Confidence            8999999999999999999999999999998766 89999999999998 699999999999875

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=9.5e-23  Score=177.84  Aligned_cols=143  Identities=34%  Similarity=0.578  Sum_probs=132.0

Q ss_pred             cCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhcc-CCc
Q 043828          379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKR-IGN  457 (586)
Q Consensus       379 ~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~-~~~  457 (586)
                      ..++++++.+++++|+.+|.|++|+|+.+||..++...|..++..++..++..++.++++.++|++|......... ...
T Consensus         2 ~~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (146)
T d1lkja_           2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDS   81 (146)
T ss_dssp             CCCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCH
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhccccH
Confidence            4678999999999999999999999999999999999999999999999999999999999999999986655433 345


Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      ++.++.+|+.||+|++|+|+.+||+.+|..+|...+ +++++.++..+| |+||+|+|+||+++|.
T Consensus        82 ~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~-~~~~~~~~~~~d-d~dG~I~~~eF~~~m~  145 (146)
T d1lkja_          82 EQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLT-DAEVDDMLREVS-DGSGEINIQQFAALLS  145 (146)
T ss_dssp             HHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCC-HHHHHHHHHHHC-CSSSEEEHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCccc-HHHHHHHHHhcc-CCCCeEeHHHHHHHhC
Confidence            678999999999999999999999999999998777 889999999999 9999999999999886

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.6e-22  Score=173.07  Aligned_cols=139  Identities=25%  Similarity=0.509  Sum_probs=127.4

Q ss_pred             hhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh-ccCCchhHH
Q 043828          383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL-KRIGNDDIL  461 (586)
Q Consensus       383 ~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~-~~~~~~~~~  461 (586)
                      +++.++++++|..+|.|++|+|+..||..+++..|..++...+..++..+|.+++|.|+|.||+...... ......+.+
T Consensus         2 ~~~~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l   81 (141)
T d2obha1           2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEI   81 (141)
T ss_dssp             HHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhccHHHH
Confidence            5678899999999999999999999999999999999999999999999999999999999999865432 223346779


Q ss_pred             HHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 043828          462 SQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM  522 (586)
Q Consensus       462 ~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~  522 (586)
                      +.+|..+|.+++|.|+..||..++..+|...+ +.++..+|+.+|.|+||.|+|+||+++|
T Consensus        82 ~~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~-~~e~~~l~~~~D~d~dG~i~~~EF~~~m  141 (141)
T d2obha1          82 LKAFKLFDDDETGKISFKNLKRVAKELGENLT-DEELQEMIDEADRDGDGEVSEQEFLRIM  141 (141)
T ss_dssp             HHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCC-HHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred             HHHHHHhcccCCCCccHHHHHHHHHHhCCCCC-HHHHHHHHHHHCCCCCCCEeHHHHHHhC
Confidence            99999999999999999999999999998777 8999999999999999999999999886

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.86  E-value=4.5e-22  Score=174.60  Aligned_cols=142  Identities=25%  Similarity=0.412  Sum_probs=125.1

Q ss_pred             CchhhHhHHHHhhhhccC--CCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhc--cCC
Q 043828          381 LPQDQMAQIKQMFYMMDT--DKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLK--RIG  456 (586)
Q Consensus       381 l~~~~~~~~~~~F~~~D~--~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~--~~~  456 (586)
                      ++++|+++++++|..||.  |++|.|+..||..+|+.+|.+++.+++..+. ..|.+++|.|+|+||+.++....  ...
T Consensus         1 Ls~eqi~~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t~~e~~~~~-~~~~~~~~~i~~~eFl~~~~~~~~~~~~   79 (152)
T d1wdcc_           1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVG-GTHKMGEKSLPFEEFLPAYEGLMDCEQG   79 (152)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHTT-CCSSTTSCEECHHHHHHHHHHHTTSCCC
T ss_pred             CCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCccHhhhhhhh-hhhccccccccccccccccccccccchh
Confidence            467889999999999995  8999999999999999999999999998764 46888999999999999765543  234


Q ss_pred             chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCC--CCCceeHHHHHHHHhc
Q 043828          457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLD--RDGRISFEEFKAMMTS  524 (586)
Q Consensus       457 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~--~dg~i~~~eF~~~~~~  524 (586)
                      ..++++++|+.||.+++|+|+.+||+.+|..+|...+ +++++.+++.+|.+  ++|.|+|+||++.|..
T Consensus        80 ~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~~ls-~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~~  148 (152)
T d1wdcc_          80 TFADYMEAFKTFDREGQGFISGAELRHVLTALGERLS-DEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA  148 (152)
T ss_dssp             CHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCC-HHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred             HHHhhhhhhhccccccCccchHHHHHHHHHHcCCCCC-HHHHHHHHHHhccCCCCCCEEEHHHHHHHHhc
Confidence            5678999999999999999999999999999998877 89999999999864  5689999999998764

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.86  E-value=6.3e-22  Score=172.33  Aligned_cols=137  Identities=19%  Similarity=0.383  Sum_probs=121.1

Q ss_pred             HhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCC--CCCcccHhHHHhhhhhhc---cCCchhH
Q 043828          386 MAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVD--GNGLLSCDEFVTMSVHLK---RIGNDDI  460 (586)
Q Consensus       386 ~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d--~dg~i~~~eF~~~~~~~~---~~~~~~~  460 (586)
                      .++++++|..||.|++|+|+.+||..+|+.+|.+++..++..++..++.+  ++|.|+|+||+.++....   .....+.
T Consensus         3 ~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~   82 (145)
T d2mysc_           3 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFED   82 (145)
T ss_pred             HHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccchHHH
Confidence            46789999999999999999999999999999999999999999988765  688999999998664432   2345667


Q ss_pred             HHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       461 ~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ++.+|+.||.|++|+|+.+||+.+|..+|...+ .++++.+++. |.|+||.|+|+||++.+..
T Consensus        83 l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~-~~e~~~l~~~-~~d~dG~I~y~eF~~~ll~  144 (145)
T d2mysc_          83 FVEGLRVFDKEGNGTVMGAELRHVLATLGEKMT-EEEVEELMKG-QEDSNGCINYEAFVKHIMS  144 (145)
T ss_pred             HHHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCC-HHHHHHHHhh-cCCCCCeEEHHHHHHHHhc
Confidence            999999999999999999999999999998766 8899999975 8899999999999988753

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.86  E-value=8.5e-22  Score=175.02  Aligned_cols=144  Identities=35%  Similarity=0.656  Sum_probs=129.7

Q ss_pred             CCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh----ccC
Q 043828          380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL----KRI  455 (586)
Q Consensus       380 ~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~----~~~  455 (586)
                      .++.+++.+++++|..+|.|++|+|+.+||+.++...+..++...+..++..+|.+++|.+++.||+......    ...
T Consensus        13 ~ls~~~i~el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~~~   92 (162)
T d1topa_          13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKG   92 (162)
T ss_dssp             HSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhccc
Confidence            4678899999999999999999999999999999999999999999999999999999999999998754322    122


Q ss_pred             CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ...+.++.+|+.+|.|++|+|+..||..+|...+.... .+++..+|..+|.|+||.|+|+||+++|..
T Consensus        93 ~~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~-~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~  160 (162)
T d1topa_          93 KSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVT-EEDIEDLMKDSDKNNDGRIDFDEFLKMMEG  160 (162)
T ss_dssp             HHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCC-HHHHHHHHHHHCTTCSSSBCHHHHHHHHHS
T ss_pred             CcHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhhCCCCC-HHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence            34567889999999999999999999999999887766 889999999999999999999999999875

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.86  E-value=1.1e-21  Score=173.04  Aligned_cols=148  Identities=29%  Similarity=0.570  Sum_probs=130.2

Q ss_pred             hcccCCchhhHhHHHHhhhhccCCC-CCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh--
Q 043828          376 VVADNLPQDQMAQIKQMFYMMDTDK-NGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL--  452 (586)
Q Consensus       376 ~~~~~l~~~~~~~~~~~F~~~D~~~-~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~--  452 (586)
                      ....+++++++++++++|..+|.|+ ||.|+..||..+|+.+|..++..++..++..++.+++|.+++.+|.......  
T Consensus         3 ~~~~~Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (156)
T d1dtla_           3 AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMK   82 (156)
T ss_dssp             TGGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC
T ss_pred             HHHHHCCHHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhccc
Confidence            3456788999999999999999995 8999999999999999999999999999999999999999999998743322  


Q ss_pred             --ccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          453 --KRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       453 --~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                        .....++.++.+|+.||.|++|+|+.+||..++..+|...+ +++++.+|+.+|.|+||.|+|+||+.+|..
T Consensus        83 ~~~~~~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls-~~e~~~i~~~~D~d~dG~I~~~eF~~~l~g  155 (156)
T d1dtla_          83 DDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETIT-EDDIEELMKDGDKNNDGRIDYDEFLEFMKG  155 (156)
T ss_dssp             -----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCC-HHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred             ccccccHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCC-HHHHHHHHHHhCCCCCCeEeHHHHHHHHcC
Confidence              22345678999999999999999999999999999887766 899999999999999999999999999864

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.85  E-value=4.4e-22  Score=180.07  Aligned_cols=145  Identities=38%  Similarity=0.764  Sum_probs=133.7

Q ss_pred             ccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCc
Q 043828          378 ADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGN  457 (586)
Q Consensus       378 ~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~  457 (586)
                      +.++++++++.++++|+.+|.|++|+|+.+||..+|..++..++..+++.+|..+|.+++|.|+|.+|+.+.........
T Consensus         1 ~~~Lt~~ei~~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~   80 (182)
T d1s6ia_           1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLER   80 (182)
T ss_dssp             CCSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCC
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccccccchhhhhhhhccccccchHHHHHHHHHhhccccc
Confidence            35788889999999999999999999999999999999999999999999999999999999999999997776666667


Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      .+.++.+|+.+|.+++|+|+..||..++..+|.  + ++++..+|+.+|.|+||.|+|+||+++|...
T Consensus        81 ~e~l~~aF~~~D~d~~G~i~~~el~~~l~~~gl--~-~~ev~~~f~~~D~d~DG~Is~~EF~~~m~~~  145 (182)
T d1s6ia_          81 EENLVSAFSYFDKDGSGYITLDEIQQACKDFGL--D-DIHIDDMIKEIDQDNDGQIDYGEFAAMMRKR  145 (182)
T ss_dssp             CCSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTC--C-TTHHHHHHHHHCSSSSSEEETTHHHHTTSCC
T ss_pred             HHHHHHHHHHHhhcCCCccchhhhhhhhhhcCc--c-HHHHHHHHHHhhcCCCCeEeHHHHHHHHHhC
Confidence            778999999999999999999999999988763  3 6789999999999999999999999999854

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.85  E-value=2.2e-21  Score=168.66  Aligned_cols=141  Identities=19%  Similarity=0.379  Sum_probs=122.5

Q ss_pred             CchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh-hccCCchh
Q 043828          381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH-LKRIGNDD  459 (586)
Q Consensus       381 l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~-~~~~~~~~  459 (586)
                      ++++++.+++++|..+|.+++|.|+.+||..+|+.+|..++..+   ++..++.+++|.|+|.||+.++.. .......+
T Consensus         1 f~~~qi~el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~---~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~   77 (145)
T d2mysb_           1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNE---ELDAMIKEASGPINFTVFLTMFGEKLKGADPED   77 (145)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchHH---HHHHHHHhccCceeechhhhhhhhcccccchHH
Confidence            46788999999999999999999999999999999997665543   344555678999999999996544 34445567


Q ss_pred             HHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          460 ILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       460 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      .++.+|+.||.+++|+|+.+||+.+|..+|...+ ++++..++..+|.|++|.|+|.||+++|...
T Consensus        78 ~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls-~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~~  142 (145)
T d2mysb_          78 VIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFT-PEEIKNMWAAFPPDVAGNVDYKNICYVITHG  142 (145)
T ss_pred             HHHHHHHhhhhcccchhhHHHHHHHHHHcCCCCC-HHHHHHHHHHhCCCCCCeEeHHHHHHHhccC
Confidence            8999999999999999999999999999998766 8999999999999999999999999999754

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.85  E-value=1.3e-21  Score=168.85  Aligned_cols=133  Identities=21%  Similarity=0.397  Sum_probs=118.1

Q ss_pred             HhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhc---cCCchhHHH
Q 043828          386 MAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLK---RIGNDDILS  462 (586)
Q Consensus       386 ~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~---~~~~~~~~~  462 (586)
                      ...++++|..||.|++|.|+.+||..+|+.+|.+++.+++..+    +.+.+|.|+|+||+.++....   .....+.++
T Consensus         4 ~~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t~~ei~~~----~~~~~~~i~~~eF~~~~~~~~~~~~~~~~~~l~   79 (140)
T d1ggwa_           4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI----ESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFV   79 (140)
T ss_dssp             CTTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHH----HTTSCSSEEHHHHHHHHCTTSSSSSSCCHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhHHHhhhhh----hccccccccchhhhhhhhhhhhcchhhHHHHHH
Confidence            3678999999999999999999999999999999999887654    678899999999999765432   223467899


Q ss_pred             HHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          463 QAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       463 ~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ++|+.||.|++|+|+.+||+.+|..+|...+ +++++.+++.+|.| ||.|+|+||+.+|..
T Consensus        80 ~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt-~~e~~~l~~~~d~~-dG~I~y~eF~~~m~s  139 (140)
T d1ggwa_          80 KGFQVFDKDATGMIGVGELRYVLTSLGEKLS-NEEMDELLKGVPVK-DGMVNYHDFVQMILA  139 (140)
T ss_dssp             HHHHTTCSSCSSCCCHHHHHHHHHHHHSCSC-HHHHHHHHHHTTCS-SCCSTTTHHHHHHHC
T ss_pred             HHHHHHhccCCCcchHHHHHHHHHHcCCCCC-HHHHHHHHHhhCCC-CCEEeHHHHHHHHhc
Confidence            9999999999999999999999999998766 89999999999988 999999999998764

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=99.85  E-value=2.4e-21  Score=166.20  Aligned_cols=129  Identities=19%  Similarity=0.366  Sum_probs=115.0

Q ss_pred             HHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCC---chhHHHHHH
Q 043828          389 IKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIG---NDDILSQAF  465 (586)
Q Consensus       389 ~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~---~~~~~~~~F  465 (586)
                      .+++|+.+|.|+||.||.+||..++..++..++.++++.+|..+|.|++|.|+|+||+.++.......   ....++.+|
T Consensus         2 ae~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~F   81 (134)
T d1jfja_           2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLY   81 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccc
Confidence            46899999999999999999999999999999999999999999999999999999998765443322   245689999


Q ss_pred             hhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 043828          466 RFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM  522 (586)
Q Consensus       466 ~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~  522 (586)
                      +.+|.|++|+|+.+|+..++..++     .+.+.++|..+|.|+||.|+|+||+++|
T Consensus        82 ~~~D~~~~g~i~~~el~~~~~~~~-----~~~~~~~~~~~D~d~dG~is~~EF~~~~  133 (134)
T d1jfja_          82 KLMDVDGDGKLTKEEVTSFFKKHG-----IEKVAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHHCCSSSSEEEHHHHHHHHTTTT-----CHHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             cccccccCCcccHHHHHHHHHhcC-----cHHHHHHHHHHCCCCCCCCCHHHHHHHh
Confidence            999999999999999999998654     3468889999999999999999999986

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.84  E-value=3.8e-21  Score=167.26  Aligned_cols=123  Identities=20%  Similarity=0.305  Sum_probs=111.9

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCC--CCCceeHHHHHHHHhcc---------h
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLD--RDGRISFEEFKAMMTSG---------A  526 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~--~dg~i~~~eF~~~~~~~---------~  526 (586)
                      .++++++|..||.|++|+|+.+||..+|+.+|..++ ..++..++..++.+  ++|.|+|+||..++...         .
T Consensus         3 ~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~-~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~   81 (145)
T d2mysc_           3 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPT-NAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGTFE   81 (145)
T ss_pred             HHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcch-hhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccchHH
Confidence            467999999999999999999999999999999887 78899999887655  68999999999988532         5


Q ss_pred             HHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          527 DWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       527 ~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      .++.+|+.||+|++|+|+.+||+.+|..+|.+++.++++.|++. |.|+||+|+|.
T Consensus        82 ~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~-~~d~dG~I~y~  136 (145)
T d2mysc_          82 DFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYE  136 (145)
T ss_pred             HHHHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCHHHHHHHHhh-cCCCCCeEEHH
Confidence            68899999999999999999999999999999999999999985 88999999985

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=5.5e-21  Score=166.42  Aligned_cols=136  Identities=21%  Similarity=0.383  Sum_probs=118.8

Q ss_pred             HHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHH-hcCCCCCcccHhHHHhhhhhh------ccCCchhH
Q 043828          388 QIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEA-ADVDGNGLLSCDEFVTMSVHL------KRIGNDDI  460 (586)
Q Consensus       388 ~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~-~D~d~dg~i~~~eF~~~~~~~------~~~~~~~~  460 (586)
                      .++++|..||.|++|+|+.+||..+|+.+|..++.++++.++.. .+.+.+|.|+|.||..++...      ......+.
T Consensus         3 ~~k~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~~   82 (146)
T d1m45a_           3 ANKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTED   82 (146)
T ss_dssp             CCTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHH
T ss_pred             HHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccccchHHH
Confidence            47899999999999999999999999999999999999999975 456677999999999865422      22345678


Q ss_pred             HHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       461 ~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      +..+|+.||.+++|+|+.+||..+|..+|...+ ++++..++..+|.|+||.|+|+||+..+.+
T Consensus        83 l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~-~~ei~~l~~~~D~d~dG~I~y~eF~~~i~~  145 (146)
T d1m45a_          83 FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLT-DAEVDELLKGVEVDSNGEIDYKKFIEDVLR  145 (146)
T ss_dssp             HHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCC-HHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred             HHHHHHhhccccccccchhhhhhhhcccCCcch-HHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence            999999999999999999999999999998766 899999999999999999999999987653

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.83  E-value=6.1e-21  Score=164.66  Aligned_cols=119  Identities=17%  Similarity=0.300  Sum_probs=108.4

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc---------hHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG---------ADW  528 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~---------~~~  528 (586)
                      +.+++++|..||+|++|+|+.+||..+|+.+|..++ .+++..    ++.+++|.|+|+||+.++...         +.+
T Consensus         4 ~~~fke~F~~~D~d~dG~I~~~el~~~l~~lg~~~t-~~ei~~----~~~~~~~~i~~~eF~~~~~~~~~~~~~~~~~~l   78 (140)
T d1ggwa_           4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPT-LAEITE----IESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEF   78 (140)
T ss_dssp             CTTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCC-HHHHHH----HHTTSCSSEEHHHHHHHHCTTSSSSSSCCHHHH
T ss_pred             HHHHHHHHHHHCCCCCCeECHHHHHHHHHHHHhhhH-HHhhhh----hhccccccccchhhhhhhhhhhhcchhhHHHHH
Confidence            356899999999999999999999999999999887 666654    467889999999999999643         569


Q ss_pred             HHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          529 KMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       529 ~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +++|+.||+|++|+|+.+||+++|..+|.+++++++++|++.+|.| ||+|+|.
T Consensus        79 ~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-dG~I~y~  131 (140)
T d1ggwa_          79 VKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYH  131 (140)
T ss_dssp             HHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTCS-SCCSTTT
T ss_pred             HHHHHHHhccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhCCC-CCEEeHH
Confidence            9999999999999999999999999999999999999999999988 9999875

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.82  E-value=1.9e-20  Score=161.95  Aligned_cols=119  Identities=16%  Similarity=0.335  Sum_probs=108.8

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKM  530 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~  530 (586)
                      .++++++|..||+|++|.|+..||..+|+.+|..++ +.++..++.    +++|.|+|+||+.++...       +.++.
T Consensus         6 i~e~~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~~-~~el~~~~~----~~~~~i~~~eF~~~~~~~~~~~~~~~~l~~   80 (142)
T d1wdcb_           6 IQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPD-DKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTDSEETIRN   80 (142)
T ss_dssp             HHHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCC-HHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCCCHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCcCChHHHHHHHHHhhcCCC-HHHHHHHHH----hccCccccccccccccccccccchhhhHHH
Confidence            356899999999999999999999999999999887 888887774    668999999999988643       77999


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +|+.||+|++|+|+.+||++++..+|.++|++++++|++.+|.| +|+|+|.
T Consensus        81 aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-~G~I~y~  131 (142)
T d1wdcb_          81 AFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYV  131 (142)
T ss_dssp             HHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHH
T ss_pred             hhhhhcccCCCcccHHHHHHHHHHccccCCHHHHHHHHHHhCCC-CCEEcHH
Confidence            99999999999999999999999999999999999999999998 6999874

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=99.82  E-value=3.9e-20  Score=161.03  Aligned_cols=123  Identities=22%  Similarity=0.403  Sum_probs=115.3

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHHH
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKMA  531 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~~  531 (586)
                      .+++++|..+|+|++|+|+.+||..++...+..++ ...+..++..+|.+++|.|+|+||+..+...       +.++.+
T Consensus         9 ~~l~~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~-~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~   87 (146)
T d1exra_           9 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEA   87 (146)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCC-HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCCC-HHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChHHHHHHH
Confidence            46899999999999999999999999999998877 8889999999999999999999999987532       578899


Q ss_pred             HHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          532 SRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       532 F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      |+.||.|++|+|+.+||+.++..+|..+++++++++++.+|.|+||+|++.
T Consensus        88 F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i~~~~D~d~dG~i~~~  138 (146)
T d1exra_          88 FKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYE  138 (146)
T ss_dssp             HHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHH
T ss_pred             HHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHH
Confidence            999999999999999999999999999999999999999999999999874

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.82  E-value=1.2e-19  Score=165.28  Aligned_cols=151  Identities=19%  Similarity=0.256  Sum_probs=124.9

Q ss_pred             hhhHhHHHHhhhhccCC-CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHH
Q 043828          383 QDQMAQIKQMFYMMDTD-KNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDIL  461 (586)
Q Consensus       383 ~~~~~~~~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~  461 (586)
                      .-...+++++|..|+.+ ++|+|+.+||+.+|...+...+...++.+|+.+|.|+||.|+|.||+.++........++.+
T Consensus        17 ~~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~~   96 (189)
T d1jbaa_          17 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKL   96 (189)
T ss_dssp             HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHH
T ss_pred             ccCHHHHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHHH
Confidence            33445566666666554 69999999999999999999999999999999999999999999999988777767778899


Q ss_pred             HHHHhhhcCCCCCcccHHHHHHHHHhcC----------------CCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          462 SQAFRFFDKNQSGFIEVDELKEVLLEDN----------------AGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       462 ~~~F~~~D~d~~G~i~~~el~~~l~~~~----------------~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      +.+|+.||.|++|.|+..|+..++..+.                .....++.++.+|..+|.|+||.|+|+||+.++...
T Consensus        97 ~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~if~~~D~d~dG~Is~~EF~~~~~~~  176 (189)
T d1jbaa_          97 KWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRD  176 (189)
T ss_dssp             HHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTTT
T ss_pred             HHHHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchhhhhccccchHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC
Confidence            9999999999999999999988775421                111224567889999999999999999999999877


Q ss_pred             hHHHHHHH
Q 043828          526 ADWKMASR  533 (586)
Q Consensus       526 ~~~~~~F~  533 (586)
                      +.+.+++.
T Consensus       177 p~i~~~l~  184 (189)
T d1jbaa_         177 KWVMKMLQ  184 (189)
T ss_dssp             TTHHHHHH
T ss_pred             HHHHHHhc
Confidence            66665543

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.82  E-value=5.3e-20  Score=167.57  Aligned_cols=156  Identities=22%  Similarity=0.297  Sum_probs=133.8

Q ss_pred             CCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCH-HHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCch
Q 043828          380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSD-PDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGND  458 (586)
Q Consensus       380 ~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~-~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~  458 (586)
                      .++..+++.+.+.|..  .+++|.|+..|+..++..++..... +.++++|..+|.|++|.|+|.||+.++........+
T Consensus        21 ~fs~~Ei~~l~~~F~~--~~~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~~   98 (190)
T d1fpwa_          21 YFDRREIQQWHKGFLR--DCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLE   98 (190)
T ss_dssp             CSTHHHHHHHHHHHHH--HCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCST
T ss_pred             CCCHHHHHHHHHHHHH--HCCCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCcccHHHHHHHHHHHccCchH
Confidence            4678888888888854  4568999999999999988765554 447999999999999999999999988777777778


Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCC-----------CCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchH
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAG-----------PNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGAD  527 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~-----------~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~  527 (586)
                      +.++.+|+.||.|++|.|+.+|+..++......           ...+..++.+|+.+|.|+||.|+|+||..++...+.
T Consensus        99 e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~p~  178 (190)
T d1fpwa_          99 EKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPS  178 (190)
T ss_dssp             HHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSSTT
T ss_pred             HHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCHH
Confidence            999999999999999999999999998754321           112567899999999999999999999999999999


Q ss_pred             HHHHHHhhhh
Q 043828          528 WKMASRQYSR  537 (586)
Q Consensus       528 ~~~~F~~~D~  537 (586)
                      +.++|..||.
T Consensus       179 i~~~l~~~d~  188 (190)
T d1fpwa_         179 IIGALNLYDG  188 (190)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHhhhhcc
Confidence            9999999983

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=5.8e-20  Score=163.36  Aligned_cols=146  Identities=28%  Similarity=0.437  Sum_probs=122.5

Q ss_pred             hcccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccC
Q 043828          376 VVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRI  455 (586)
Q Consensus       376 ~~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~  455 (586)
                      .|...++++++++++++|+.+|.|++|+|+.+||..++.....    +.++.+|..+|.+++|.|+|+||+..+......
T Consensus         5 ~~~t~ft~eei~~l~~~F~~~D~d~~G~I~~~E~~~~~~~~~~----~~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~   80 (165)
T d1auib_           5 EMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQN----PLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVK   80 (165)
T ss_dssp             CCCCSCCHHHHHHHHHHHHHHCTTCCSEECHHHHTTSHHHHTC----TTHHHHHHHHCTTCSSSEEHHHHHHHHGGGCTT
T ss_pred             HHcCCCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHhhhccCC----HHHHHHHHHHccccchhhhhhhhhhhccccccc
Confidence            4677889999999999999999999999999999887765432    246789999999999999999999977665433


Q ss_pred             -CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCC----HHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          456 -GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNG----DQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       456 -~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~----~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                       ...+.++.+|+.+|.|++|+|+.+||..+++........    +..+..+|..+|.|+||.|+++||+++|...
T Consensus        81 ~~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dG~Is~~EF~~i~~~~  155 (165)
T d1auib_          81 GDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL  155 (165)
T ss_dssp             CCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCTTSSSSEEHHHHHHHHGGG
T ss_pred             hhhHHHHHHHHHHhcccccccccHHHHHHHHHHhccccCchHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHHhcC
Confidence             445679999999999999999999999999764333222    4457788999999999999999999998753

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=99.81  E-value=3.7e-20  Score=167.22  Aligned_cols=126  Identities=20%  Similarity=0.231  Sum_probs=99.2

Q ss_pred             CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhh
Q 043828          456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQY  535 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~  535 (586)
                      ...++++++|+.+|.|++|+|+.+||..+|+.+|...+ +.+++.++..+|.|++|+|+|.||...+.....+..+|+.+
T Consensus        15 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~s-~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~F~~~   93 (182)
T d1y1xa_          15 NDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFS-LATTEKLLHMYDKNHSGEITFDEFKDLHHFILSMREGFRKR   93 (182)
T ss_dssp             CTTSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCC-HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHhcccCc-hhhhhhhhccccccccccccccccccccccccccccchhcc
Confidence            34456788888888888888888888888877777665 77788888888888888888888887777667777888888


Q ss_pred             hhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          536 SRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       536 D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      |.+++|+|+.+||++++..+|..+++++++.+++.+|.|+||.|++.
T Consensus        94 D~~~~g~I~~~el~~~l~~~g~~ls~~e~~~i~~~~d~~~dg~I~~~  140 (182)
T d1y1xa_          94 DSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFD  140 (182)
T ss_dssp             CTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHH
T ss_pred             ccccchhhhhHHHHHHHHHhCCchhHHHHHHHHhhcccCCCCCcCHH
Confidence            88888888888888888888888888888888888888888887763

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=8.9e-20  Score=157.73  Aligned_cols=124  Identities=21%  Similarity=0.383  Sum_probs=116.6

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKM  530 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~  530 (586)
                      .++++++|..+|+|++|+|+..||..++...|..++ ...+..++..+|.+++|.|+++||...+...       ..++.
T Consensus         5 ~~elk~~F~~~D~~~~G~Is~~e~~~~l~~~~~~~~-~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~   83 (141)
T d2obha1           5 KQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPK-KEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILK   83 (141)
T ss_dssp             HHHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCC-HHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCeEeHHHHHHHHHhcCCchh-HHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhccHHHHHH
Confidence            457999999999999999999999999999988877 8889999999999999999999999988643       56889


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +|..+|.+++|.|+.++|+.++..+|..++++++..+++.+|.|+||+|++.
T Consensus        84 ~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e~~~l~~~~D~d~dG~i~~~  135 (141)
T d2obha1          84 AFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQ  135 (141)
T ss_dssp             HHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHH
T ss_pred             HHHHhcccCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCCEeHH
Confidence            9999999999999999999999999999999999999999999999999874

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.7e-20  Score=161.85  Aligned_cols=133  Identities=20%  Similarity=0.372  Sum_probs=115.1

Q ss_pred             HHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcC--CCCCcccHhHHHhhhhhhcc---CCchhHHH
Q 043828          388 QIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADV--DGNGLLSCDEFVTMSVHLKR---IGNDDILS  462 (586)
Q Consensus       388 ~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~--d~dg~i~~~eF~~~~~~~~~---~~~~~~~~  462 (586)
                      +++++|..||.+++|.|+.+||..+|+.+|..++..++..++..++.  +++|.|+|.||..++.....   ....+.++
T Consensus         1 e~ke~F~~~D~d~~G~I~~~el~~~l~~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~l~   80 (139)
T d1w7jb1           1 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYL   80 (139)
T ss_dssp             CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCH
T ss_pred             CHHHHHHHHhCCCCCeECHHHHHHHHHHhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhccccHHHHHH
Confidence            47899999999999999999999999999999999999999988774  67999999999986654322   23355689


Q ss_pred             HHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 043828          463 QAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM  522 (586)
Q Consensus       463 ~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~  522 (586)
                      .+|+.+|+|++|+|+.+||+.+|..+|...+ +++++.++.. |.|+||.|+|+||+++|
T Consensus        81 ~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~-~~e~~~l~~~-~~d~dg~I~~~eF~~~l  138 (139)
T d1w7jb1          81 EGFRVFDKEGNGKVMGAELRHVLTTLGEKMT-EEEVETVLAG-HEDSNGCINYEAFLKHI  138 (139)
T ss_dssp             HHHHTTCTTSSSEEEHHHHHHHHHHSSSCCC-HHHHHHHHTT-CCCTTSEEEHHHHHHHT
T ss_pred             HhhhhccCCCCCeEeHHHHHHHHHHhCCCCC-HHHHHHHHhh-CCCCCCeEeHHHHHHHh
Confidence            9999999999999999999999999998776 8889988865 88999999999999876

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=1.1e-19  Score=163.98  Aligned_cols=149  Identities=15%  Similarity=0.210  Sum_probs=71.8

Q ss_pred             CCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccC-CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHH
Q 043828          420 VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRI-GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTI  498 (586)
Q Consensus       420 ~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~  498 (586)
                      +..+++..+|..+|.|++|+|+.+||..++...... ...+.++.+|+.+|.|++|.|+.+||..++..       ...+
T Consensus        16 ~~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~-------~~~~   88 (181)
T d1hqva_          16 PDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY-------ITDW   88 (181)
T ss_dssp             SCHHHHHHHHHHHCTTCCSSBCHHHHHHHCCCSSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHH-------HHHH
T ss_pred             ccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCcccHHHHHHHhhccccccccchhhhHHHhhhhh-------cccc
Confidence            334445555555555555555555555444333222 23444555555555555555555555554432       2234


Q ss_pred             HHHHHHhcCCCCCceeHHHHHHHHhcc------hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhc
Q 043828          499 RDILRDVDLDRDGRISFEEFKAMMTSG------ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVE  572 (586)
Q Consensus       499 ~~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d  572 (586)
                      ...++.+|.+++|.|+.+||..++...      +.+..+++.+|.+++|.|+.+|+...+..+      +.+..+++.+|
T Consensus        89 ~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~~~l------~~l~~~F~~~D  162 (181)
T d1hqva_          89 QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL------QRLTDIFRRYD  162 (181)
T ss_dssp             HHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHHHHCSSCSSCBCHHHHHHHHHHH------HHHHHHHHHHC
T ss_pred             ccccccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH------HHHHHHHHHhC
Confidence            444555555555555555555544322      344455555555555555555555444222      12444555555


Q ss_pred             cCCCceEec
Q 043828          573 LKKSGQLRI  581 (586)
Q Consensus       573 ~~~dg~i~~  581 (586)
                      +++||.|++
T Consensus       163 ~~~dG~i~~  171 (181)
T d1hqva_         163 TDQDGWIQV  171 (181)
T ss_dssp             TTCSSCCCC
T ss_pred             CCCCCCEEe
Confidence            555555544

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.80  E-value=4.2e-20  Score=161.82  Aligned_cols=122  Identities=19%  Similarity=0.253  Sum_probs=108.9

Q ss_pred             hHHHHHHhhhcC--CCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc--------hHH
Q 043828          459 DILSQAFRFFDK--NQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG--------ADW  528 (586)
Q Consensus       459 ~~~~~~F~~~D~--d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~--------~~~  528 (586)
                      ++++++|..||.  |++|+|+.+||..+|+.+|..++ +.++..+ ...+.+++|.|+|+||+.++...        ..+
T Consensus         7 ~~l~~~F~~fD~~~~~dG~I~~~el~~~l~~lG~~~t-~~e~~~~-~~~~~~~~~~i~~~eFl~~~~~~~~~~~~~~~~l   84 (152)
T d1wdcc_           7 DDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPR-NEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADY   84 (152)
T ss_dssp             HHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCC-HHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHH
T ss_pred             HHHHHHHHHHCcCCCCCCeECHHHHHHHHHHhccCcc-Hhhhhhh-hhhhccccccccccccccccccccccchhHHHhh
Confidence            468899999994  89999999999999999999887 8888765 45688899999999999987532        669


Q ss_pred             HHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhcc--CCCceEecC
Q 043828          529 KMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVEL--KKSGQLRIP  582 (586)
Q Consensus       529 ~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~--~~dg~i~~~  582 (586)
                      +.+|+.||+|++|+|+.+||+++|..+|..+|++++++|++.+|.  |++|+|+|.
T Consensus        85 ~~aF~~~D~~~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~d~~~d~~G~I~y~  140 (152)
T d1wdcc_          85 MEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYE  140 (152)
T ss_dssp             HHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHH
T ss_pred             hhhhhccccccCccchHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCEEEHH
Confidence            999999999999999999999999999999999999999999986  456899974

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1.2e-19  Score=164.80  Aligned_cols=156  Identities=16%  Similarity=0.231  Sum_probs=131.7

Q ss_pred             CCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCH-HHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCch
Q 043828          380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSD-PDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGND  458 (586)
Q Consensus       380 ~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~-~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~  458 (586)
                      .++..++..+.+.|...  +++|.|+..++..++..++..... ..++.+|..+|.|++|.|+|.||+.++.........
T Consensus        18 ~fs~~Ei~~l~~~F~~~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~~   95 (187)
T d1g8ia_          18 YFTEKEVQQWYKGFIKD--CPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLD   95 (187)
T ss_dssp             SSCHHHHHHHHHHHHHH--CTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCHH
T ss_pred             CCCHHHHHHHHHHHHHH--CCCCCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHhccCchh
Confidence            46788888888888654  468999999999999988766654 446889999999999999999999977776666778


Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCC-----------CCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchH
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNA-----------GPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGAD  527 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~-----------~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~  527 (586)
                      +.++.+|+.||.|++|+|+.+|+..++..+..           ....++.++.+|..+|.|+||.|+|+||+.++...+.
T Consensus        96 e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~p~  175 (187)
T d1g8ia_          96 EKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPS  175 (187)
T ss_dssp             HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHCHH
T ss_pred             hhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhccHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHCHH
Confidence            88999999999999999999999998864311           0112467889999999999999999999999999899


Q ss_pred             HHHHHHhhhh
Q 043828          528 WKMASRQYSR  537 (586)
Q Consensus       528 ~~~~F~~~D~  537 (586)
                      +.+.|..||.
T Consensus       176 ~~~~l~~~~~  185 (187)
T d1g8ia_         176 IVQALSLYDG  185 (187)
T ss_dssp             HHHHHCCBTT
T ss_pred             HHHHHHHhhc
Confidence            9999988873

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.80  E-value=2.8e-20  Score=161.90  Aligned_cols=121  Identities=20%  Similarity=0.331  Sum_probs=109.2

Q ss_pred             HHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHH-hcCCCCCceeHHHHHHHHhcc------------hH
Q 043828          461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRD-VDLDRDGRISFEEFKAMMTSG------------AD  527 (586)
Q Consensus       461 ~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~-~d~~~dg~i~~~eF~~~~~~~------------~~  527 (586)
                      ++++|..||+|++|+|+.+||..+|+.+|..++ +++++.++.. .+.+.+|.|+|+||..++...            +.
T Consensus         4 ~k~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s-~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~~   82 (146)
T d1m45a_           4 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPT-NQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTED   82 (146)
T ss_dssp             CTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCC-HHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHH
T ss_pred             HHHHHHHHcCCCcCCCCHHHHHHHHHHcCCchh-HHHHhhhhccccccccccccccchhhhhhhhhcccccccccchHHH
Confidence            577999999999999999999999999999887 8889999874 556677999999999988532            56


Q ss_pred             HHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          528 WKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       528 ~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +..+|+.||++++|+|+.+||+.+|..+|..++++++..|++.+|.|+||+|+|.
T Consensus        83 l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D~d~dG~I~y~  137 (146)
T d1m45a_          83 FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYK  137 (146)
T ss_dssp             HHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHH
T ss_pred             HHHHHHhhccccccccchhhhhhhhcccCCcchHHHHHHHHHHhCCCCCCcEEHH
Confidence            8899999999999999999999999999999999999999999999999999985

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.79  E-value=2.4e-19  Score=155.85  Aligned_cols=123  Identities=22%  Similarity=0.383  Sum_probs=114.9

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKM  530 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~  530 (586)
                      ..+++++|+.||.|++|+|+.+||..++...|..++ +..+..++...+.++++.++|++|...+...       +.++.
T Consensus         9 i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (146)
T d1lkja_           9 IAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPS-EAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLE   87 (146)
T ss_dssp             HHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCC-HHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcEeHHHHHHHHHhcCCCCC-HHHHHHHHHHhccCCcccccHHHHHHHHHHhhccccHHHHHHH
Confidence            356899999999999999999999999999998887 8889999999999999999999999988642       57899


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +|+.||+|++|+|+.+||+.++..+|..+++++++.|++.+| |+||+|++.
T Consensus        88 aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dG~I~~~  138 (146)
T d1lkja_          88 AFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQ  138 (146)
T ss_dssp             HHHHHCSSSSCEEEHHHHHHHHHHHTCSCCHHHHHHHHHHHC-CSSSEEEHH
T ss_pred             HHHHhCCCCCCcCcHHHHHHHHHHcCCcccHHHHHHHHHhcc-CCCCeEeHH
Confidence            999999999999999999999999999999999999999999 999999874

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.79  E-value=1.5e-19  Score=156.92  Aligned_cols=120  Identities=14%  Similarity=0.171  Sum_probs=107.5

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHHH
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKMA  531 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~~  531 (586)
                      ++++++|..||.|++|+|+.+||..+|+.+|..++..+.    +..++.+++|.|+|+||+..+...       +.++.+
T Consensus         7 ~el~e~F~~~D~~~~G~I~~~e~~~~l~~lg~~~~~~~~----~~~~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~a   82 (145)
T d2mysb_           7 EDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEE----LDAMIKEASGPINFTVFLTMFGEKLKGADPEDVIMGA   82 (145)
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCcchHHH----HHHHHHhccCceeechhhhhhhhcccccchHHHHHHH
Confidence            468899999999999999999999999999977664443    445556778999999999988653       679999


Q ss_pred             HHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          532 SRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       532 F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      |+.||++++|+|+.+||+++|..+|.++|+++++.+++.+|.|+||+|+|.
T Consensus        83 F~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d~d~dg~I~y~  133 (145)
T d2mysb_          83 FKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYK  133 (145)
T ss_pred             HHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHH
Confidence            999999999999999999999999999999999999999999999999874

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.79  E-value=2.6e-19  Score=158.65  Aligned_cols=123  Identities=22%  Similarity=0.342  Sum_probs=114.0

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc----------hHH
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG----------ADW  528 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~----------~~~  528 (586)
                      .+++++|+.+|+|++|+|+.+||..+|...+..+. +..+..++..+|.+++|.+++.||...+...          +.+
T Consensus        20 ~el~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~   98 (162)
T d1topa_          20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPT-KEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEEL   98 (162)
T ss_dssp             HHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCC-HHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCeEcHHHHHHHHhccCCchh-HHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhcccCcHHHH
Confidence            46999999999999999999999999999888777 8899999999999999999999998776422          557


Q ss_pred             HHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          529 KMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       529 ~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +.+|+.||.|++|+|+.+||+.++...|...+.++++.||+.+|.|+||.|++.
T Consensus        99 ~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~  152 (162)
T d1topa_          99 ANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFD  152 (162)
T ss_dssp             HHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHH
T ss_pred             HHHHHHHCCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHhCCCCCCcEEHH
Confidence            889999999999999999999999999999999999999999999999999974

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.79  E-value=1e-18  Score=158.01  Aligned_cols=153  Identities=21%  Similarity=0.353  Sum_probs=125.7

Q ss_pred             ccCCchhhHhHHHHhhhhccCC--CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhc-c
Q 043828          378 ADNLPQDQMAQIKQMFYMMDTD--KNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLK-R  454 (586)
Q Consensus       378 ~~~l~~~~~~~~~~~F~~~D~~--~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~-~  454 (586)
                      ...++.+++..+++.|+.+|.+  ++|.|+.+||+.++...+...+ ..++.+|+.+|.|++|.|+|.||+.++.... .
T Consensus         8 ~t~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~~~-~~~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~   86 (183)
T d2zfda1           8 DTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKES-LFADRVFDLFDTKHNGILGFEEFARALSVFHPN   86 (183)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSCCC-HHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTT
T ss_pred             hCCCCHHHHHHHHHHHHHHCcCCCCCCcCcHHHHHHHHHhcCCCCC-HHHHHHHHHHccCCCCcCcHHHHHHHHHhhhcc
Confidence            3567899999999999999976  6999999999999988776654 4689999999999999999999998665443 3


Q ss_pred             CCchhHHHHHHhhhcCCCCCcccHHHHHHHHHh----cCCCCCCHH----HHHHHHHHhcCCCCCceeHHHHHHHHhcch
Q 043828          455 IGNDDILSQAFRFFDKNQSGFIEVDELKEVLLE----DNAGPNGDQ----TIRDILRDVDLDRDGRISFEEFKAMMTSGA  526 (586)
Q Consensus       455 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~----~~~~~~~~~----~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~  526 (586)
                      ...++.++.+|+.+|.|++|.|+.+|+..++..    .+.... +.    .+..+|..+|.|+||.|+|+||..++...+
T Consensus        87 ~~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~-~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~~p  165 (183)
T d2zfda1          87 APIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLK-DTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHP  165 (183)
T ss_dssp             SCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCC-HHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHHSG
T ss_pred             CcHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccc-hHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHCH
Confidence            455678999999999999999999999998754    243333 33    356678999999999999999999998765


Q ss_pred             HHHHHH
Q 043828          527 DWKMAS  532 (586)
Q Consensus       527 ~~~~~F  532 (586)
                      .+.+.|
T Consensus       166 ~~~~~~  171 (183)
T d2zfda1         166 SLLKNM  171 (183)
T ss_dssp             GGGGGG
T ss_pred             HHHHHc
Confidence            555444

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=3.8e-20  Score=159.65  Aligned_cols=121  Identities=16%  Similarity=0.237  Sum_probs=109.6

Q ss_pred             HHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcC--CCCCceeHHHHHHHHhcc---------hHH
Q 043828          460 ILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDL--DRDGRISFEEFKAMMTSG---------ADW  528 (586)
Q Consensus       460 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~--~~dg~i~~~eF~~~~~~~---------~~~  528 (586)
                      +++++|+.||+|++|+|+.+||..+|+.+|..++ +.++..++..++.  +++|.|+|.+|..++...         +.+
T Consensus         1 e~ke~F~~~D~d~~G~I~~~el~~~l~~lg~~~t-~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~l   79 (139)
T d1w7jb1           1 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPT-NAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDY   79 (139)
T ss_dssp             CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCC-HHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CC
T ss_pred             CHHHHHHHHhCCCCCeECHHHHHHHHHHhccCCC-HHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhccccHHHHH
Confidence            3789999999999999999999999999999888 8889999887764  678999999999988642         558


Q ss_pred             HHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          529 KMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       529 ~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +.+|+.||+|++|+|+.+||+.++..+|..+++++++.|+.. |.|+||+|+|.
T Consensus        80 ~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~~-~~d~dg~I~~~  132 (139)
T d1w7jb1          80 LEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAG-HEDSNGCINYE  132 (139)
T ss_dssp             HHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTT-CCCTTSEEEHH
T ss_pred             HHhhhhccCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCeEeHH
Confidence            899999999999999999999999999999999999999975 88999999974

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=99.78  E-value=3.2e-19  Score=152.66  Aligned_cols=117  Identities=19%  Similarity=0.221  Sum_probs=105.3

Q ss_pred             HHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc---------hHHHHH
Q 043828          461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG---------ADWKMA  531 (586)
Q Consensus       461 ~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~---------~~~~~~  531 (586)
                      .+.+|+.+|.|++|.||.+||..++..++..++ ++++..++..+|.|++|.|+|+||+.++...         ..++.+
T Consensus         2 ae~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~-~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~   80 (134)
T d1jfja_           2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKN-EQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVL   80 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSH-HHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCC-HHHHHHHHHHhhhccccccccccccccccccccccccccccccccc
Confidence            467899999999999999999999999988776 8889999999999999999999999988743         557899


Q ss_pred             HHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          532 SRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       532 F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      |+.+|.+++|+|+.+|++.++..++    .+++.++++.+|.|+||+|++.
T Consensus        81 F~~~D~~~~g~i~~~el~~~~~~~~----~~~~~~~~~~~D~d~dG~is~~  127 (134)
T d1jfja_          81 YKLMDVDGDGKLTKEEVTSFFKKHG----IEKVAEQVMKADANGDGYITLE  127 (134)
T ss_dssp             HHHHCCSSSSEEEHHHHHHHHTTTT----CHHHHHHHHHHHCSSSSEEEHH
T ss_pred             ccccccccCCcccHHHHHHHHHhcC----cHHHHHHHHHHCCCCCCCCCHH
Confidence            9999999999999999999987665    4688899999999999999974

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.78  E-value=1.2e-18  Score=156.93  Aligned_cols=155  Identities=17%  Similarity=0.262  Sum_probs=127.2

Q ss_pred             CCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCC-HHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCch
Q 043828          380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVS-DPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGND  458 (586)
Q Consensus       380 ~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~-~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~  458 (586)
                      .++..+++.+.+.|..  .+++|.|+.+||..++..++.... ...++.+|..+|.|++|.|+|+||+.++.........
T Consensus         9 ~ft~~ei~~l~~~F~~--~~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~~   86 (178)
T d1s6ca_           9 NFTKRELQVLYRGFKN--ECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVH   86 (178)
T ss_dssp             SCCHHHHHHHHHHHHH--HCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHH
T ss_pred             CCCHHHHHHHHHHHHH--HCcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhccchH
Confidence            4567778787777754  456899999999999998876654 4456999999999999999999999877766666778


Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCC-----------CCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchH
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNA-----------GPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGAD  527 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~-----------~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~  527 (586)
                      +.++.+|+.||.|++|.|+.+|+..++..+..           ....+..++.+|+.+|.|+||.|+|+||..++...++
T Consensus        87 ~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~DG~Is~~EF~~~i~~~~~  166 (178)
T d1s6ca_          87 EKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDN  166 (178)
T ss_dssp             HHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSCCH
T ss_pred             HHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHCHH
Confidence            89999999999999999999999887654211           0112556788999999999999999999999998888


Q ss_pred             HHHHHHhhh
Q 043828          528 WKMASRQYS  536 (586)
Q Consensus       528 ~~~~F~~~D  536 (586)
                      +.+.+..|+
T Consensus       167 ~~~~l~~~~  175 (178)
T d1s6ca_         167 IMRSLQLFQ  175 (178)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHhhhhc
Confidence            888777765

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.78  E-value=3.5e-19  Score=160.96  Aligned_cols=152  Identities=20%  Similarity=0.292  Sum_probs=127.3

Q ss_pred             cCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCC-HHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCc
Q 043828          379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVS-DPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGN  457 (586)
Q Consensus       379 ~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~-~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~  457 (586)
                      .+++.++++.+.+.|..  .+++|.|+..||..++..++.... ...++++|..+|.+++|.|+|+||+.++........
T Consensus        16 t~fs~~ei~~l~~~F~~--~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~~   93 (181)
T d1bjfa_          16 TDFTEHEIQEWYKGFLR--DCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKL   93 (181)
T ss_dssp             SSCCHHHHHHHHHHHHH--HSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCH
T ss_pred             cCCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhch
Confidence            35778888888888854  467899999999999998875554 456899999999999999999999998777777777


Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCC-----------CCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcch
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAG-----------PNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGA  526 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~-----------~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~  526 (586)
                      ++.++.+|+.+|.|++|+|+.+|+..++......           ...+..++.+|..+|.|+||.|+|+||++++...+
T Consensus        94 ~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~~p  173 (181)
T d1bjfa_          94 EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDP  173 (181)
T ss_dssp             HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHCT
T ss_pred             HHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhCH
Confidence            8899999999999999999999999998754221           12256789999999999999999999999998776


Q ss_pred             HHHHHH
Q 043828          527 DWKMAS  532 (586)
Q Consensus       527 ~~~~~F  532 (586)
                      .+.+.+
T Consensus       174 ~~~~~l  179 (181)
T d1bjfa_         174 SIVRLL  179 (181)
T ss_dssp             HHHHTT
T ss_pred             HHHHHh
Confidence            655443

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.77  E-value=4.8e-19  Score=155.84  Aligned_cols=124  Identities=19%  Similarity=0.324  Sum_probs=112.4

Q ss_pred             hhHHHHHHhhhcCCC-CCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc----------h
Q 043828          458 DDILSQAFRFFDKNQ-SGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG----------A  526 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~-~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~----------~  526 (586)
                      .++++++|+.||.|+ ||.|+..||..+|+.+|..++ +.++..++..++.+++|.+++++|...+...          +
T Consensus        13 ~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (156)
T d1dtla_          13 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPT-PEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEE   91 (156)
T ss_dssp             HHHHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCC-HHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHH
T ss_pred             HHHHHHHHHHHcCCCCCCeECHHHHHHHHHHcCCCCC-HHHHHHHHHHhhccCCCccchhhhhhhhhhcccccccccHHH
Confidence            456899999999996 899999999999999999887 8999999999999999999999998765422          5


Q ss_pred             HHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          527 DWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       527 ~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      .++.+|+.||.|++|+|+.+|+++++..+|..+++++++++|+.+|.|+||+|++.
T Consensus        92 ~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~i~~~~D~d~dG~I~~~  147 (156)
T d1dtla_          92 ELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYD  147 (156)
T ss_dssp             HHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHH
T ss_pred             HHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEeHH
Confidence            68899999999999999999999999999999999999999999999999999974

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.77  E-value=8.2e-19  Score=161.28  Aligned_cols=152  Identities=14%  Similarity=0.177  Sum_probs=126.0

Q ss_pred             cCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCC-HHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCc
Q 043828          379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVS-DPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGN  457 (586)
Q Consensus       379 ~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~-~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~  457 (586)
                      .+++..++..+.+.|.  +.+++|.|+.+||+.++..++.... ...++.+|..+|.|++|.|+|.||+.++........
T Consensus        20 t~f~~~ei~~l~~~F~--~~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~f~EF~~~~~~~~~~~~   97 (201)
T d1omra_          20 TKFTEEELSSWYQSFL--KECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKT   97 (201)
T ss_dssp             CSSCHHHHHHHHHHHH--HHCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEEHHHHHHHHHHHHSSCG
T ss_pred             CCCCHHHHHHHHHHHH--HHCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccch
Confidence            3467888888888884  4567899999999999999876554 455689999999999999999999987777766777


Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCC-------------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGP-------------NGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~-------------~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ++.++.+|+.||.|++|.|+.+|+..++.......             ..+..++.+|..+|.|+||.|+|+||+..+..
T Consensus        98 ~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~  177 (201)
T d1omra_          98 NQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGTLA  177 (201)
T ss_dssp             GGSHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGGSSHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCCCCccCHHHHHHHHHHHHhhcChhhhhhhhhhhccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            88899999999999999999999999887643321             11445788999999999999999999998887


Q ss_pred             chHHHHHH
Q 043828          525 GADWKMAS  532 (586)
Q Consensus       525 ~~~~~~~F  532 (586)
                      .+.+.+.+
T Consensus       178 ~~~~~~~l  185 (201)
T d1omra_         178 NKEILRLI  185 (201)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHh
Confidence            66665554

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.5e-18  Score=152.89  Aligned_cols=117  Identities=15%  Similarity=0.229  Sum_probs=102.1

Q ss_pred             HHHHhhhcCCCCCcccHHHHHHHHHhcCCCCC----CHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHHhhhh
Q 043828          462 SQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN----GDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASRQYSR  537 (586)
Q Consensus       462 ~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~----~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~  537 (586)
                      ...|..+ .+.+|.|+.+||+.+|+..|....    ..+.++.++..+|.|++|.|+|+||+.++.....|+.+|+.||+
T Consensus         3 ~~~F~~~-a~~dG~I~~~EL~~~L~~~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~~~~~~~~F~~fD~   81 (165)
T d1k94a_           3 YTYFSAV-AGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVDQ   81 (165)
T ss_dssp             HHHHHHH-HGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             HHHHHHh-cCCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhccchhHHHHHHhCC
Confidence            4556666 577999999999999999887653    36789999999999999999999999999988999999999999


Q ss_pred             hccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEec
Q 043828          538 AMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRI  581 (586)
Q Consensus       538 d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~  581 (586)
                      |++|+|+.+||+.++..+|..+++++++.|++.+|.  ||.|++
T Consensus        82 d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~~d~--~g~i~~  123 (165)
T d1k94a_          82 DGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK--NGRIFF  123 (165)
T ss_dssp             TCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHCB--TTBCBH
T ss_pred             CCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHHcCC--CCcCcH
Confidence            999999999999999999999999999999987764  355554

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.1e-18  Score=155.94  Aligned_cols=111  Identities=19%  Similarity=0.270  Sum_probs=91.1

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCC----CHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN----GDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMASR  533 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~----~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~  533 (586)
                      .+.++..|+.++ ++||.|+..||+.+|+.+|..+.    +.+++..++..+|.|++|.|+|+||+.++.....+..+|+
T Consensus         6 ~~~~~~~F~~~~-~~dG~Is~~EL~~~L~~~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~~~~~~~f~   84 (172)
T d1juoa_           6 QDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFI   84 (172)
T ss_dssp             CCTTHHHHHHHH-TTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC-CCCCCCCHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHHHhhhhhhHHHH
Confidence            455788888886 67889999999888888876543    3677888888888888899999999888887788888889


Q ss_pred             hhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHH
Q 043828          534 QYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKK  569 (586)
Q Consensus       534 ~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~  569 (586)
                      .||+|++|+|+.+|++.+|..+|..++.++++.+++
T Consensus        85 ~~D~d~sG~i~~~El~~~l~~~g~~ls~~~~~~l~~  120 (172)
T d1juoa_          85 SFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAK  120 (172)
T ss_dssp             TTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred             HhCcCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence            999999999999999888888888888877765555

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.75  E-value=1.7e-18  Score=156.11  Aligned_cols=122  Identities=20%  Similarity=0.320  Sum_probs=113.7

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc------hHHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG------ADWKMA  531 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~~~~  531 (586)
                      ..+++++|+.+|.|++|+|+.+||..+|..++..++ ..++..++..+|.+++|.|+|++|+..+...      +.++.+
T Consensus         9 i~~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~~~-~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~e~l~~a   87 (182)
T d1s6ia_           9 IGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELM-ESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSA   87 (182)
T ss_dssp             TCSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCC-HHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHH
T ss_pred             HHHHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCccc-cccchhhhhhhhccccccchHHHHHHHHHhhcccccHHHHHHH
Confidence            356999999999999999999999999999998887 8899999999999999999999999987654      678999


Q ss_pred             HHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          532 SRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       532 F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      |+.+|.+++|+|+.++|++++..+|  +++++++.|++.+|.|+||+|++.
T Consensus        88 F~~~D~d~~G~i~~~el~~~l~~~g--l~~~ev~~~f~~~D~d~DG~Is~~  136 (182)
T d1s6ia_          88 FSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDNDGQIDYG  136 (182)
T ss_dssp             HHHTTTTCSSEEEHHHHHHTTTTTT--CCTTHHHHHHHHHCSSSSSEEETT
T ss_pred             HHHHhhcCCCccchhhhhhhhhhcC--ccHHHHHHHHHHhhcCCCCeEeHH
Confidence            9999999999999999999999887  799999999999999999999985

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=99.74  E-value=1.6e-18  Score=156.99  Aligned_cols=121  Identities=13%  Similarity=0.087  Sum_probs=77.5

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCC-------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHH
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGP-------NGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMA  531 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~-------~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~  531 (586)
                      +.++++|..+| |+||.|+..||..+|..+|...       .+.+++..++..+|.|++|.|+|+||+.++.....|+.+
T Consensus        18 ~~~r~~F~~~d-~~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~   96 (186)
T d1df0a1          18 DGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKIQKYQKI   96 (186)
T ss_dssp             HHHHHHHHHHH-GGGTCEEHHHHHHHHHHHHHC----CCCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHc-CCCCeEcHHHHHHHHHHhcccccccccccCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhHHHHHHH
Confidence            44666677666 6667777777777666544321       125566667777777777777777777766666666777


Q ss_pred             HHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEec
Q 043828          532 SRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRI  581 (586)
Q Consensus       532 F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~  581 (586)
                      |+.||+|++|+|+.+||+.+|...|..++.+.++ ++..+|.|+||+|++
T Consensus        97 F~~~D~d~sG~I~~~El~~~l~~~g~~~~~~~~~-~~~~~d~d~dg~I~f  145 (186)
T d1df0a1          97 YREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQ-VIVARFADDELIIDF  145 (186)
T ss_dssp             HHHHCTTCCSCEEGGGHHHHHHHTTEECCHHHHH-HHHHHHCCSTTEECH
T ss_pred             HHhhCCCCCCcccHHHHHHHHHHHHhcccHHHHH-HHHHHHcCCCCeEeH
Confidence            7777777777777777777777777666655443 333456666666654

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=99.71  E-value=4.7e-17  Score=147.84  Aligned_cols=153  Identities=18%  Similarity=0.243  Sum_probs=116.9

Q ss_pred             chhhHhHHHHhhhhccCCCCCCcCHHHHHHHH-----HhcCCCCCHHHHHHH-----HHHhcCCCCCcccHhHHHhhhhh
Q 043828          382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGL-----NMIGQKVSDPDVKML-----MEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       382 ~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l-----~~~~~~~~~~~~~~~-----~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      +++++++++++|..+|.|++|+|+.+||..++     +.+|..++..++..+     +...+.+.++.|+++||+.++..
T Consensus         9 ~~~~i~r~k~~F~~~D~d~dG~I~~~E~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~   88 (189)
T d1qv0a_           9 NPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQ   88 (189)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhhccccCCCceehHHHHHHHHH
Confidence            46778899999999999999999999998754     456777666665433     44556778899999999886533


Q ss_pred             hcc-----------CCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHH
Q 043828          452 LKR-----------IGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA  520 (586)
Q Consensus       452 ~~~-----------~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~  520 (586)
                      ...           ....+.+..+|+.+|.|++|+|+.+||..++..+|...+ ++++..+|+.+|.|+||.|+|+||++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~-~~~~~~lf~~~D~d~dG~Is~~EF~~  167 (189)
T d1qv0a_          89 LATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPS-QEDCEATFRHCDLDNAGDLDVDEMTR  167 (189)
T ss_dssp             HHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCC-HHHHHHHHHHSCCCTTSCEEHHHHHH
T ss_pred             HHHHhhhccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCC-HHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence            211           112345778999999999999999999999999998877 88999999999999999999999998


Q ss_pred             HHhcchHHHHHHHhhhhhccC
Q 043828          521 MMTSGADWKMASRQYSRAMMS  541 (586)
Q Consensus       521 ~~~~~~~~~~~F~~~D~d~~G  541 (586)
                      ++..      .|...|.+-.|
T Consensus       168 ~~~~------~~~~~d~~~~g  182 (189)
T d1qv0a_         168 QHLG------FWYTLDPEADG  182 (189)
T ss_dssp             HHHH------HHTTCCGGGTT
T ss_pred             HHHH------hCCCCCCCCCC
Confidence            7752      34445555444

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=6.4e-17  Score=145.08  Aligned_cols=152  Identities=18%  Similarity=0.302  Sum_probs=117.9

Q ss_pred             cCCchhhHhHHHHhhhhccCCCCCC--------cCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCC-CCCcccHhHHHhhh
Q 043828          379 DNLPQDQMAQIKQMFYMMDTDKNGD--------LTFEELKDGLNMIGQKVSDPDVKMLMEAADVD-GNGLLSCDEFVTMS  449 (586)
Q Consensus       379 ~~l~~~~~~~~~~~F~~~D~~~~G~--------i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d-~dg~i~~~eF~~~~  449 (586)
                      ..++.+++..+++.|..++.+++|.        ++.+++..+.. +..++   -++++|+.+|.| ++|.|+|+||+.++
T Consensus         9 T~ft~~EI~~l~~~F~~l~~~~~~~~~~~~~~~i~~~e~~~~~~-l~~~~---~~~rif~~fd~~~~~g~I~f~EFv~~l   84 (180)
T d1xo5a_           9 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPE-LKANP---FKERICRVFSTSPAKDSLSFEDFLDLL   84 (180)
T ss_dssp             CCSCHHHHHHHHHHHHTTSCGGGCSHHHHHHCCEEHHHHHTSHH-HHTCT---THHHHHHHHCCSTTCCEECHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHCcCccccccccccceEcHHHHhcCcc-cccCh---HHHHHHHhccCCCCCCcCcHHHHHHHH
Confidence            3678899999999999998887765        55555543222 11111   367899999987 69999999999876


Q ss_pred             hhhc-cCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcC-----CCCCC---HHHHHHHHHHhcCCCCCceeHHHHHH
Q 043828          450 VHLK-RIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDN-----AGPNG---DQTIRDILRDVDLDRDGRISFEEFKA  520 (586)
Q Consensus       450 ~~~~-~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~-----~~~~~---~~~~~~~~~~~d~~~dg~i~~~eF~~  520 (586)
                      .... ....++.++.+|+.||.|++|+|+.+||..++..+.     ...+.   ++.+..++..+|.|+||.|+|+||..
T Consensus        85 ~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~dG~Is~~EF~~  164 (180)
T d1xo5a_          85 SVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQH  164 (180)
T ss_dssp             HHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCSSSBCHHHHHH
T ss_pred             HHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence            5554 345577899999999999999999999999998752     22221   23466789999999999999999999


Q ss_pred             HHhcchHHHHHHHh
Q 043828          521 MMTSGADWKMASRQ  534 (586)
Q Consensus       521 ~~~~~~~~~~~F~~  534 (586)
                      ++...+++...|+.
T Consensus       165 ~~~~~P~~~~~f~i  178 (180)
T d1xo5a_         165 VISRSPDFASSFKI  178 (180)
T ss_dssp             HHHHCHHHHHHHHH
T ss_pred             HHHhCHHHHhhCee
Confidence            99988888888753

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.70  E-value=7.9e-18  Score=152.47  Aligned_cols=140  Identities=15%  Similarity=0.247  Sum_probs=112.7

Q ss_pred             CchhhHhHHHHhhhh-ccCCCCCCcCHHHHHHHHHhcCC----CCCH-----------HHHHHHHHHhcCCCCCcccHhH
Q 043828          381 LPQDQMAQIKQMFYM-MDTDKNGDLTFEELKDGLNMIGQ----KVSD-----------PDVKMLMEAADVDGNGLLSCDE  444 (586)
Q Consensus       381 l~~~~~~~~~~~F~~-~D~~~~G~i~~~el~~~l~~~~~----~~~~-----------~~~~~~~~~~D~d~dg~i~~~e  444 (586)
                      +++.+.++++.+|+. +|.|+||+|+.+||..++..++.    ....           .....++...|.+++|.|++++
T Consensus         2 lt~~q~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~   81 (185)
T d2sasa_           2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE   81 (185)
T ss_dssp             CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred             cCHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeH
Confidence            567788999999997 69999999999999999876521    1111           1134567778999999999999


Q ss_pred             HHhhhhhhccC---------CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeH
Q 043828          445 FVTMSVHLKRI---------GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISF  515 (586)
Q Consensus       445 F~~~~~~~~~~---------~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~  515 (586)
                      |..++......         .....+..+|+.+|.|++|+|+.+||+.+|..+|..   .++++.+|..+|.|+||.|+|
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l~---~~~~~~~f~~~D~d~dG~i~~  158 (185)
T d2sasa_          82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQ---CADVPAVYNVITDGGKVTFDL  158 (185)
T ss_dssp             HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCC---CSSHHHHHHHHHTTTTSCCSH
T ss_pred             hhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcCCC---HHHHHHHHHHcCCCCCCCCcH
Confidence            99866432211         123458899999999999999999999999987753   557899999999999999999


Q ss_pred             HHHHHHHh
Q 043828          516 EEFKAMMT  523 (586)
Q Consensus       516 ~eF~~~~~  523 (586)
                      +||..++.
T Consensus       159 ~EF~~~~~  166 (185)
T d2sasa_         159 NRYKELYY  166 (185)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            99998875

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=99.70  E-value=1.7e-18  Score=156.10  Aligned_cols=122  Identities=12%  Similarity=0.095  Sum_probs=89.4

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCC-------CCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcchHHHHH
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAG-------PNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSGADWKMA  531 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~-------~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~  531 (586)
                      +.++++|+.+|. ++|.|+..||+.+|...+..       ....+.++.++..+|.|++|.|+|+||..++.....|+.+
T Consensus        20 ~~~r~~F~~~d~-~dG~Is~~EL~~~L~~~~~~~~~~~~~~~s~e~~~~li~~~D~d~~G~i~~~EF~~l~~~~~~~~~~   98 (188)
T d1qxpa2          20 DNFKTLFSKLAG-DDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIRNYLTI   98 (188)
T ss_dssp             -------CCCCC-SSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcC-CCCEECHHHHHHHHHHhCccccccccccCCHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhHHHHHH
Confidence            357888988884 47999999998887655443       2336778889999999999999999999988888889999


Q ss_pred             HHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          532 SRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       532 F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      |+.||+|++|+|+..||+.+|..+|..++++.++.|+.. |.|+||.|+++
T Consensus        99 F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~~-~~~~dg~i~f~  148 (188)
T d1qxpa2          99 FRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVAR-FADDELIIDFD  148 (188)
T ss_dssp             HGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHH-TSCSSSBCCHH
T ss_pred             HHHhCCCCCCEECHHHHHHHHHHhhhcCCHHHHHHHHHH-hcCCCCcCCHH
Confidence            999999999999999999999999988887766666655 55777777653

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=99.70  E-value=4.9e-17  Score=131.83  Aligned_cols=101  Identities=30%  Similarity=0.444  Sum_probs=85.5

Q ss_pred             CCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhc---CCCCCCH
Q 043828          419 KVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLED---NAGPNGD  495 (586)
Q Consensus       419 ~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~---~~~~~~~  495 (586)
                      -++.++|.+++..+|  .+|.|+|.||+.++..  ....++.++.+|+.||+|++|+|+.+||+.+|+.+   |...+ +
T Consensus         5 ~l~~~di~~~~~~~~--~~G~idf~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~-~   79 (109)
T d5pala_           5 VLKADDINKAISAFK--DPGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLN-D   79 (109)
T ss_dssp             TSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCC-H
T ss_pred             HccHHHHHHHHHhcC--CCCcCcHHHHHHHHHh--cCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCC-H
Confidence            356788999999886  4689999999976532  23456789999999999999999999999999876   43444 8


Q ss_pred             HHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          496 QTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       496 ~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ++++++++.+|.|+||.|+|+||+++|..
T Consensus        80 ~e~~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d5pala_          80 TETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             HHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence            89999999999999999999999999863

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.70  E-value=4.6e-17  Score=131.99  Aligned_cols=100  Identities=26%  Similarity=0.454  Sum_probs=84.9

Q ss_pred             CCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhc---CCCCCCHH
Q 043828          420 VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLED---NAGPNGDQ  496 (586)
Q Consensus       420 ~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~---~~~~~~~~  496 (586)
                      ++.++|.+++..+|  ++|.|+|+||+.++..  .....+.++.+|+.||+|++|+|+.+||+.+|..+   |..++ ++
T Consensus         6 l~~eeI~~~~~~~d--~dG~idf~EF~~~~~~--~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls-~~   80 (109)
T d1pvaa_           6 LKADDIKKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLT-DA   80 (109)
T ss_dssp             SCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCC-HH
T ss_pred             CCHHHHHHHHHhcC--CCCCCcHHHHHHHHHH--ccCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCC-HH
Confidence            46788888888775  5788999999986542  23456789999999999999999999999999877   33444 89


Q ss_pred             HHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          497 TIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       497 ~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      +++.+++.+|.|+||.|+|+||+.+|..
T Consensus        81 ev~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d1pvaa_          81 ETKAFLKAADKDGDGKIGIDEFETLVHE  108 (109)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             HHHHHHHHHCCCCcCcEeHHHHHHHHHh
Confidence            9999999999999999999999999864

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=99.70  E-value=5.6e-17  Score=145.18  Aligned_cols=138  Identities=18%  Similarity=0.222  Sum_probs=108.5

Q ss_pred             hhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcC--CCCCHHH-------HHHHHHH--hcCCCCCcccHhHHHhhhhh
Q 043828          383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIG--QKVSDPD-------VKMLMEA--ADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       383 ~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~--~~~~~~~-------~~~~~~~--~D~d~dg~i~~~eF~~~~~~  451 (586)
                      +-+.++++.+|..+|.|+||+|+.+||..++..++  .......       ....+..  .|.+++|.|+++||+..+..
T Consensus         2 ~~~~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~   81 (174)
T d2scpa_           2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKE   81 (174)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHh
Confidence            34678999999999999999999999999987652  1222222       2222332  27788999999999986654


Q ss_pred             hccCC-----chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          452 LKRIG-----NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       452 ~~~~~-----~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      .....     ....++.+|+.+|.|++|.|+.+||..++..++..   .+++..+|..+|.|+||.|+++||+.++.
T Consensus        82 ~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~---~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~  155 (174)
T d2scpa_          82 MVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLD---KTMAPASFDAIDTNNDGLLSLEEFVIAGS  155 (174)
T ss_dssp             HTSCGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCC---GGGHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred             hhcchhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHhhh---hHHHHHHHhhcCCCCCCcEeHHHHHHHHH
Confidence            43221     23458889999999999999999999999987753   56789999999999999999999999875

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.69  E-value=1.6e-17  Score=148.43  Aligned_cols=147  Identities=14%  Similarity=0.172  Sum_probs=99.6

Q ss_pred             HHHHHHHHHhcCCCCCcccHhHHHhhhhhhccC--------CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCC
Q 043828          423 PDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRI--------GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNG  494 (586)
Q Consensus       423 ~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~--------~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~  494 (586)
                      .+++++|..+| ++||.|+..|+..++......        ...+..+.++..+|.|++|.|+.+|+..++..       
T Consensus         4 ~~~r~~F~~~d-~~dg~I~~~EL~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~~~-------   75 (173)
T d1alva_           4 RQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN-------   75 (173)
T ss_dssp             HHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH-------
T ss_pred             HHHHHHHHHHc-CCCCcCCHHHHHHHHHHhCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhhhh-------
Confidence            45677777777 347777777777765544322        12356777777777777777777777776643       


Q ss_pred             HHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-----hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHH
Q 043828          495 DQTIRDILRDVDLDRDGRISFEEFKAMMTSG-----ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKK  569 (586)
Q Consensus       495 ~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-----~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~  569 (586)
                      ...+..+++.+|.|++|.|+..||..++...     +....+|..+|.|++|.|+.+|+.+++..+      +.+..+++
T Consensus        76 ~~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~~~~~~~~~~d~d~~G~i~~~EF~~~~~~~------~~~~~~f~  149 (173)
T d1alva_          76 IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYSDEGGNMDFDNFISCLVRL------DAMFRAFK  149 (173)
T ss_dssp             HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHTCSSSCBCHHHHHHHHHHH------HHHHHHHH
T ss_pred             hhHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHHHHHHHhhccccCCCCeEeHHHHHHHHHHH------HHHHHHHH
Confidence            3346667777777777777777777776532     455666667777777777777777776543      35667777


Q ss_pred             hhccCCCceEecCC
Q 043828          570 SVELKKSGQLRIPH  583 (586)
Q Consensus       570 ~~d~~~dg~i~~~~  583 (586)
                      .+|+|+||.||+++
T Consensus       150 ~~D~d~~G~it~~~  163 (173)
T d1alva_         150 SLDKDGTGQIQVNI  163 (173)
T ss_dssp             HHSSSCCSEEEEEH
T ss_pred             HhCCCCCCcEEecH
Confidence            78888888887654

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.69  E-value=2e-16  Score=143.57  Aligned_cols=152  Identities=20%  Similarity=0.317  Sum_probs=127.9

Q ss_pred             CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHh-cCCCCCcccHhHHHhhhhhhccCC-chhHHHHHHhhhcCCCCCccc
Q 043828          400 KNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAA-DVDGNGLLSCDEFVTMSVHLKRIG-NDDILSQAFRFFDKNQSGFIE  477 (586)
Q Consensus       400 ~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~-D~d~dg~i~~~eF~~~~~~~~~~~-~~~~~~~~F~~~D~d~~G~i~  477 (586)
                      +...++.+++..+.+.  ..+++.||+.+++.| +.+.+|.|+..||..++....... ..+....+|+.+|.|++|.|+
T Consensus         4 ~~S~l~~e~l~~l~~~--t~fs~~Ei~~l~~~F~~~~~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~   81 (190)
T d1fpwa_           4 KTSKLSKDDLTCLKQS--TYFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIH   81 (190)
T ss_dssp             CSCCSTTHHHHHHTTT--CCSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEEC
T ss_pred             ccCCCCHHHHHHHHHH--cCCCHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCccc
Confidence            3456888998886665  357889999998887 557899999999998776654433 345568899999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc------------------hHHHHHHHhhhhhc
Q 043828          478 VDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG------------------ADWKMASRQYSRAM  539 (586)
Q Consensus       478 ~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------------------~~~~~~F~~~D~d~  539 (586)
                      ..||..++..++.... ++.++.+|..+|.|++|.|+++||..++...                  ..+..+|+.+|.|+
T Consensus        82 ~~Ef~~~~~~~~~~~~-~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~  160 (190)
T d1fpwa_          82 FEEFITVLSTTSRGTL-EEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNE  160 (190)
T ss_dssp             HHHHHHHHHHHSCCCS-THHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHHHHccCch-HHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCC
Confidence            9999999998887666 7889999999999999999999999988532                  34778999999999


Q ss_pred             cCcccHHHHHHHHHh
Q 043828          540 MSALSIKLFKDKSME  554 (586)
Q Consensus       540 ~G~i~~~el~~~~~~  554 (586)
                      +|.|+.+|+++++..
T Consensus       161 dG~Is~~EF~~~~~~  175 (190)
T d1fpwa_         161 DGYITLDEFREGSKV  175 (190)
T ss_dssp             SSEEEHHHHHHHHHS
T ss_pred             CCcCcHHHHHHHHHH
Confidence            999999999998654

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=5.4e-17  Score=143.85  Aligned_cols=119  Identities=16%  Similarity=0.224  Sum_probs=100.1

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-------hHHHHH
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-------ADWKMA  531 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-------~~~~~~  531 (586)
                      ..++++|+.+|+|++|+|+.+||..++.. +..+.    ++.++..+|.+++|.|+|+||+..+...       ..++.+
T Consensus        16 ~~l~~~F~~~D~d~~G~I~~~E~~~~~~~-~~~~~----~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~~~~~~~~~~   90 (165)
T d1auib_          16 KRLGKRFKKLDLDNSGSLSVEEFMSLPEL-QQNPL----VQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFA   90 (165)
T ss_dssp             HHHHHHHHHHCTTCCSEECHHHHTTSHHH-HTCTT----HHHHHHHHCTTCSSSEEHHHHHHHHGGGCTTCCHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCcHHHHHHhhhc-cCCHH----HHHHHHHHccccchhhhhhhhhhhccccccchhhHHHHHHH
Confidence            46888999999999999999999887654 33333    6778999999999999999999988754       568999


Q ss_pred             HHhhhhhccCcccHHHHHHHHHhh-cccCC----hhhHHHHHHhhccCCCceEecC
Q 043828          532 SRQYSRAMMSALSIKLFKDKSMEL-TKSME----LNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       532 F~~~D~d~~G~i~~~el~~~~~~~-g~~~~----~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      |+.||.|++|+|+.+||.+++... |..++    ++.++.++.++|.|+||+|++.
T Consensus        91 f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dG~Is~~  146 (165)
T d1auib_          91 FRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFE  146 (165)
T ss_dssp             HHHHCTTCSSEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCTTSSSSEEHH
T ss_pred             HHHhcccccccccHHHHHHHHHHhccccCchHHHHHHHHHHHHHcCCCCCCcEeHH
Confidence            999999999999999999998664 44444    5667889999999999999975

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=99.67  E-value=7.4e-17  Score=146.23  Aligned_cols=141  Identities=17%  Similarity=0.211  Sum_probs=112.3

Q ss_pred             chhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHh-----cCCCCCHHHHHHHHH-----HhcCCCCCcccHhHHHhhhhh
Q 043828          382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNM-----IGQKVSDPDVKMLME-----AADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       382 ~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~-----~~~~~~~~~~~~~~~-----~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      ++..+++++++|..+|.|++|+|+.+||..++..     ++..++..++...+.     ......++.+++.+|+..+..
T Consensus         7 ~p~~~~~~k~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (187)
T d1uhka1           7 NPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKK   86 (187)
T ss_dssp             CHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHhccCccHHHHHHHHHHhhhhcccccccccccHHHHHHHHHH
Confidence            3566789999999999999999999999776543     566666665444433     334556778999999875433


Q ss_pred             hcc-----------CCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHH
Q 043828          452 LKR-----------IGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA  520 (586)
Q Consensus       452 ~~~-----------~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~  520 (586)
                      ...           ......++.+|+.+|+|++|+|+.+||+.+|..+|...+ ++++..+|..+|.|+||.|+|+||++
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~-~~~~~~lf~~~D~d~dG~Is~~EF~~  165 (187)
T d1uhka1          87 LATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQS-SEDCEETFRVCDIDESGQLDVDEMTR  165 (187)
T ss_dssp             HHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCS-HHHHHHHHHHSCCCTTSCEEHHHHHH
T ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCcc-HHHHHHHHHHhCCCCCCCEeHHHHHH
Confidence            211           112345889999999999999999999999999998766 88999999999999999999999998


Q ss_pred             HHh
Q 043828          521 MMT  523 (586)
Q Consensus       521 ~~~  523 (586)
                      .+.
T Consensus       166 ~~~  168 (187)
T d1uhka1         166 QHL  168 (187)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            664

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.67  E-value=1.6e-16  Score=145.61  Aligned_cols=151  Identities=21%  Similarity=0.227  Sum_probs=124.0

Q ss_pred             CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHh-cCCCCCcccHhHHHhhhhhhccCC-chhHHHHHHhhhcCCCCCccc
Q 043828          400 KNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAA-DVDGNGLLSCDEFVTMSVHLKRIG-NDDILSQAFRFFDKNQSGFIE  477 (586)
Q Consensus       400 ~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~-D~d~dg~i~~~eF~~~~~~~~~~~-~~~~~~~~F~~~D~d~~G~i~  477 (586)
                      +.|.|+.++|.++.+..  .++..++..+++.| +.+++|.|+++||..++....... ....+..+|+.+|.|++|.|+
T Consensus         4 ~~~~l~~e~l~~l~~~t--~f~~~ei~~l~~~F~~~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~   81 (201)
T d1omra_           4 KSGALSKEILEELQLNT--KFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLD   81 (201)
T ss_dssp             SSCTHHHHHHHHHGGGC--SSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEE
T ss_pred             ccCCCCHHHHHHHHHhC--CCCHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEe
Confidence            56889999998877753  57899999999986 677899999999998776655433 345568899999999999999


Q ss_pred             HHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc--------------------hHHHHHHHhhhh
Q 043828          478 VDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG--------------------ADWKMASRQYSR  537 (586)
Q Consensus       478 ~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~--------------------~~~~~~F~~~D~  537 (586)
                      ..||..++..+..... ++.++.+|..+|.|++|.|+++||..++...                    .....+|+.+|+
T Consensus        82 f~EF~~~~~~~~~~~~-~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~  160 (201)
T d1omra_          82 FKEYVIALHMTSAGKT-NQKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGK  160 (201)
T ss_dssp             HHHHHHHHHHHHSSCG-GGSHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGGSSHHHHHHHHHHHTTC
T ss_pred             ehhHHHHHHhhcccch-HHHHHHHHHHHccCCCCccCHHHHHHHHHHHHhhcChhhhhhhhhhhccHHHHHHHHHHHhCC
Confidence            9999998887665544 6678999999999999999999998877532                    234678999999


Q ss_pred             hccCcccHHHHHHHHH
Q 043828          538 AMMSALSIKLFKDKSM  553 (586)
Q Consensus       538 d~~G~i~~~el~~~~~  553 (586)
                      |++|.|+.+|+.+++.
T Consensus       161 d~dG~Is~~EF~~~~~  176 (201)
T d1omra_         161 KDDDKLTEKEFIEGTL  176 (201)
T ss_dssp             CTTCCBCHHHHHHHHH
T ss_pred             CCCCCCcHHHHHHHHH
Confidence            9999999999988764

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.66  E-value=7.1e-16  Score=138.01  Aligned_cols=137  Identities=22%  Similarity=0.346  Sum_probs=111.8

Q ss_pred             hHhHHHHhhhhccCCCCCCcCHHHHHHHHHhc----CCCCCHHHH-----------HHHHHHhcCCCCCcccHhHHHhhh
Q 043828          385 QMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI----GQKVSDPDV-----------KMLMEAADVDGNGLLSCDEFVTMS  449 (586)
Q Consensus       385 ~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~----~~~~~~~~~-----------~~~~~~~D~d~dg~i~~~eF~~~~  449 (586)
                      ..++++++|+.+|.|++|.|+.+||+.++..+    +......++           ..++...|.+++|.|++.++....
T Consensus         5 ~~~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   84 (176)
T d1nyaa_           5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVT   84 (176)
T ss_dssp             HHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHH
Confidence            34678999999999999999999999998765    334433333           445666789999999999998855


Q ss_pred             hhhccCC--------chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHH
Q 043828          450 VHLKRIG--------NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAM  521 (586)
Q Consensus       450 ~~~~~~~--------~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~  521 (586)
                      .......        ....++.+|..+|.|++|.|+.+||+.++..+|.   ++++++.+|..+|.|+||.|+++||+.+
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~~---~~~~~~~~f~~~D~d~dG~i~~~Ef~~~  161 (176)
T d1nyaa_          85 ENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGM---SKAEAAEAFNQVDTNGNGELSLDELLTA  161 (176)
T ss_dssp             HHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTC---CHHHHHHHHHHHCTTCSSEEEHHHHHHH
T ss_pred             hhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcCC---cHHHHHHHHHHHCCCCCCcEeHHHHHHH
Confidence            4432221        2345788999999999999999999999998764   3788999999999999999999999999


Q ss_pred             Hhc
Q 043828          522 MTS  524 (586)
Q Consensus       522 ~~~  524 (586)
                      +..
T Consensus       162 ~~~  164 (176)
T d1nyaa_         162 VRD  164 (176)
T ss_dssp             HSC
T ss_pred             HHH
Confidence            874

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.65  E-value=1.8e-16  Score=143.78  Aligned_cols=124  Identities=18%  Similarity=0.205  Sum_probs=97.1

Q ss_pred             hhHHHHHHhhhcCC-CCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc------hHHHH
Q 043828          458 DDILSQAFRFFDKN-QSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG------ADWKM  530 (586)
Q Consensus       458 ~~~~~~~F~~~D~d-~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~~~  530 (586)
                      ..+++++|+.|+++ ++|+|+.+||..+|...+.... ...++.+|..+|.|+||.|+|.||+..+...      +.++.
T Consensus        20 ~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l~~~~~~~~-~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~~~~~~~   98 (189)
T d1jbaa_          20 AAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEA-TQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKW   98 (189)
T ss_dssp             HHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTT-HHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHH
T ss_pred             HHHHHHHHHHhcccCCCCeeeHHHHHHHHHHcCCCcc-HHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccchHHHHHH
Confidence            45678888888665 4889999999888887666554 7778888999999999999999998877632      66788


Q ss_pred             HHHhhhhhccCcccHHHHHHHHHhhc----------------c-cCChhhHHHHHHhhccCCCceEecC
Q 043828          531 ASRQYSRAMMSALSIKLFKDKSMELT----------------K-SMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       531 ~F~~~D~d~~G~i~~~el~~~~~~~g----------------~-~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +|+.||.|++|.|+.+|+..++..+.                . ..+++.++.+++.+|+|+||+|++.
T Consensus        99 ~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~if~~~D~d~dG~Is~~  167 (189)
T d1jbaa_          99 TFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLN  167 (189)
T ss_dssp             HHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHH
T ss_pred             HHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchhhhhccccchHHHHHHHHHHhCCCCCCcEeHH
Confidence            89999999999999998888765431                1 1124567899999999999999975

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.63  E-value=4.6e-16  Score=140.08  Aligned_cols=112  Identities=17%  Similarity=0.259  Sum_probs=78.0

Q ss_pred             CCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc------hHHHHHHHhhhhhccCccc
Q 043828          471 NQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG------ADWKMASRQYSRAMMSALS  544 (586)
Q Consensus       471 d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~  544 (586)
                      +++|.|+..||..++..++........++.++..+|.+++|.|+|+||+..+...      +.++.+|+.||.|++|+|+
T Consensus        34 ~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~~~~~~~~~f~~~D~d~dg~i~  113 (181)
T d1bjfa_          34 CPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYIS  113 (181)
T ss_dssp             STTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEE
T ss_pred             CCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhchHHHHHHHHHHhccCCCCeec
Confidence            4566666666666666555444434556667777777777777777776665532      4566777777777777777


Q ss_pred             HHHHHHHHHhh------------cccCChhhHHHHHHhhccCCCceEecC
Q 043828          545 IKLFKDKSMEL------------TKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       545 ~~el~~~~~~~------------g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      .+|+..++...            +..++++.++.||+.+|.|+||+|++.
T Consensus       114 ~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~  163 (181)
T d1bjfa_         114 KAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLE  163 (181)
T ss_dssp             HHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHH
T ss_pred             HHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHHHhCCCCCCcEeHH
Confidence            77777776543            234667789999999999999999975

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.60  E-value=2.1e-15  Score=121.70  Aligned_cols=101  Identities=32%  Similarity=0.405  Sum_probs=86.4

Q ss_pred             CCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCC--CCCHH
Q 043828          419 KVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAG--PNGDQ  496 (586)
Q Consensus       419 ~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~--~~~~~  496 (586)
                      .++.++|..++...+.  +|.|+|.||+.++..  .....++++.+|+.||+|++|+|+.+||..+|..++..  ..+++
T Consensus         4 gls~~di~~~~~~~~~--~gsi~~~eF~~~~~l--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~   79 (107)
T d2pvba_           4 GLKDADVAAALAACSA--ADSFKHKEFFAKVGL--ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDA   79 (107)
T ss_dssp             TSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHH
T ss_pred             CCCHHHHHHHHHhccC--CCCcCHHHHHHHHhc--ccCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHH
Confidence            4678899999998865  467999999986542  23466789999999999999999999999999988643  23488


Q ss_pred             HHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          497 TIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       497 ~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      ++..+|+.+|.|+||.|+|+||+.+|.
T Consensus        80 ~~~~l~~~~D~d~dG~I~~~EF~~~m~  106 (107)
T d2pvba_          80 ETKAFLADGDKDGDGMIGVDEFAAMIK  106 (107)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            999999999999999999999999886

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=99.60  E-value=1.7e-15  Score=137.32  Aligned_cols=123  Identities=15%  Similarity=0.192  Sum_probs=94.8

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHH-----HhcCCCCCCHHHHHH-----HHHHhcCCCCCceeHHHHHHHHhcc---
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVL-----LEDNAGPNGDQTIRD-----ILRDVDLDRDGRISFEEFKAMMTSG---  525 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l-----~~~~~~~~~~~~~~~-----~~~~~d~~~dg~i~~~eF~~~~~~~---  525 (586)
                      ..++.+|..||.|++|+|+.+||..++     +.+|..+. ..+...     .....+.+.++.|+++||...+...   
T Consensus        14 ~r~k~~F~~~D~d~dG~I~~~E~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~   92 (189)
T d1qv0a_          14 KRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPE-QTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATS   92 (189)
T ss_dssp             HHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHH-HHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHcCCCch-hHHHHHHHHHHHhhhccccCCCceehHHHHHHHHHHHHH
Confidence            357788888888888888888887643     44555443 333332     2345567788999999998888642   


Q ss_pred             --------------hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          526 --------------ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       526 --------------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                                    ..+..+|+.||+|++|+|+.+|++.++..+|..+++++++.|++.+|.|+||+|++.
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~  163 (189)
T d1qv0a_          93 ELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVD  163 (189)
T ss_dssp             HHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHH
T ss_pred             hhhccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcEeHH
Confidence                          345678999999999999999999999999999999999999999999999999974

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.60  E-value=6.4e-16  Score=125.16  Aligned_cols=86  Identities=14%  Similarity=0.187  Sum_probs=77.5

Q ss_pred             HHHHHHHHHHhcCCCCCceeHHHHHHHHhcc----hHHHHHHHhhhhhccCcccHHHHHHHHHhh---cccCChhhHHHH
Q 043828          495 DQTIRDILRDVDLDRDGRISFEEFKAMMTSG----ADWKMASRQYSRAMMSALSIKLFKDKSMEL---TKSMELNKSMEL  567 (586)
Q Consensus       495 ~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~----~~~~~~F~~~D~d~~G~i~~~el~~~~~~~---g~~~~~~~~~~~  567 (586)
                      .++|..++..+|  ++|.|+|+||+.++...    +.++.+|+.||+|++|+|+.+||+.++..+   |..+++++++.|
T Consensus         8 ~eeI~~~~~~~d--~dG~idf~EF~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls~~ev~~~   85 (109)
T d1pvaa_           8 ADDIKKALDAVK--AEGSFNHKKFFALVGLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAF   85 (109)
T ss_dssp             HHHHHHHHHHTC--STTCCCHHHHHHHHTCTTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCCHHHHHHH
T ss_pred             HHHHHHHHHhcC--CCCCCcHHHHHHHHHHccCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCCHHHHHHH
Confidence            778888888875  56889999999998643    779999999999999999999999999876   678999999999


Q ss_pred             HHhhccCCCceEecC
Q 043828          568 KKSVELKKSGQLRIP  582 (586)
Q Consensus       568 ~~~~d~~~dg~i~~~  582 (586)
                      |+.+|.|+||+|++.
T Consensus        86 ~~~~D~d~dG~I~~~  100 (109)
T d1pvaa_          86 LKAADKDGDGKIGID  100 (109)
T ss_dssp             HHHHCTTCSSSBCHH
T ss_pred             HHHHCCCCcCcEeHH
Confidence            999999999999975

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.60  E-value=2.5e-15  Score=134.72  Aligned_cols=127  Identities=12%  Similarity=0.168  Sum_probs=90.8

Q ss_pred             CchhHHHHHHhhh-cCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc------hHH
Q 043828          456 GNDDILSQAFRFF-DKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG------ADW  528 (586)
Q Consensus       456 ~~~~~~~~~F~~~-D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------~~~  528 (586)
                      -+..+++.+|+.| +.+++|.|+.+||..++..++........++.++..+|.|++|.|+|+||+..+...      +.+
T Consensus        10 ft~~ei~~l~~~F~~~~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~~~~~   89 (178)
T d1s6ca_          10 FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKL   89 (178)
T ss_dssp             CCHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhccchHHHH
Confidence            3456666666665 556678888888888777766555445666778888888888888888887766422      567


Q ss_pred             HHHHHhhhhhccCcccHHHHHHHHHhhc------------ccCChhhHHHHHHhhccCCCceEecC
Q 043828          529 KMASRQYSRAMMSALSIKLFKDKSMELT------------KSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       529 ~~~F~~~D~d~~G~i~~~el~~~~~~~g------------~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                      +.+|+.||.|++|+|+.+|+..++..+.            ....+..++.+++.+|.|+||.|++.
T Consensus        90 ~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~DG~Is~~  155 (178)
T d1s6ca_          90 RWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLD  155 (178)
T ss_dssp             HHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHH
T ss_pred             HHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCCCCCCcEeHH
Confidence            7788888888888888888877654321            12335567899999999999999874

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=7.4e-15  Score=132.66  Aligned_cols=150  Identities=19%  Similarity=0.255  Sum_probs=114.9

Q ss_pred             CCcCHHHHHHHHHhcCCCCCHHHHHHHHHHh-cCCCCCcccHhHHHhhhhhhccCCch-hHHHHHHhhhcCCCCCcccHH
Q 043828          402 GDLTFEELKDGLNMIGQKVSDPDVKMLMEAA-DVDGNGLLSCDEFVTMSVHLKRIGND-DILSQAFRFFDKNQSGFIEVD  479 (586)
Q Consensus       402 G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~-D~d~dg~i~~~eF~~~~~~~~~~~~~-~~~~~~F~~~D~d~~G~i~~~  479 (586)
                      -+++.+++..+.+..  .++..++..+++.| +.+++|.++.++|..++......... .....+|+.+|.+++|.|+.+
T Consensus         3 skl~~e~i~~l~~~t--~fs~~Ei~~l~~~F~~~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~~dg~I~~~   80 (187)
T d1g8ia_           3 SKLKPEVVEELTRKT--YFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFS   80 (187)
T ss_dssp             CSCCHHHHHHHHHTS--SSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHH
T ss_pred             ccCCHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHhCcCCCCCCcHH
Confidence            357777787777653  47788888888887 45778999999998876655544443 344678999999999999999


Q ss_pred             HHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc------------------hHHHHHHHhhhhhccC
Q 043828          480 ELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG------------------ADWKMASRQYSRAMMS  541 (586)
Q Consensus       480 el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------------------~~~~~~F~~~D~d~~G  541 (586)
                      ||..++........ ++.+..+|+.+|.|+||.|+.+||..++...                  +.+..+|+.+|.|++|
T Consensus        81 EF~~~l~~~~~~~~-~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG  159 (187)
T d1g8ia_          81 EFIQALSVTSRGTL-DEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADG  159 (187)
T ss_dssp             HHHHHHHHHHHCCH-HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSS
T ss_pred             HHHHHHHHhccCch-hhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhccHHHHHHHHHHHhCCCCCC
Confidence            99888876554433 6678888999999999999999988877521                  3356788888999999


Q ss_pred             cccHHHHHHHHHh
Q 043828          542 ALSIKLFKDKSME  554 (586)
Q Consensus       542 ~i~~~el~~~~~~  554 (586)
                      +|+.+|+.+++..
T Consensus       160 ~Is~~EF~~~~~~  172 (187)
T d1g8ia_         160 KLTLQEFQEGSKA  172 (187)
T ss_dssp             EEEHHHHHHHHHH
T ss_pred             cEeHHHHHHHHHH
Confidence            9999998887654

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=99.59  E-value=2.8e-15  Score=135.65  Aligned_cols=123  Identities=14%  Similarity=0.107  Sum_probs=98.0

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHH-----hcCCCCCCHHHHHHHHH-----HhcCCCCCceeHHHHHHHHhcc---
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLL-----EDNAGPNGDQTIRDILR-----DVDLDRDGRISFEEFKAMMTSG---  525 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~-----~~~~~~~~~~~~~~~~~-----~~d~~~dg~i~~~eF~~~~~~~---  525 (586)
                      ..++++|+.+|.|++|+|+.+||..++.     .++..+. ..++...+.     ......++.+++.+|+..+...   
T Consensus        12 ~~~k~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (187)
T d1uhka1          12 GRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPE-QAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATD   90 (187)
T ss_dssp             HHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHH-HHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHhccCcc-HHHHHHHHHHhhhhcccccccccccHHHHHHHHHHHHHH
Confidence            4577888888888889888888876554     3455444 333333333     3345567789999998776532   


Q ss_pred             --------------hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          526 --------------ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       526 --------------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                                    ..+..+|+.||+|++|+|+.+||+.++..+|..+++++++.+++.+|.|+||+|++.
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~  161 (187)
T d1uhka1          91 ELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVD  161 (187)
T ss_dssp             HHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHH
T ss_pred             HHHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHH
Confidence                          337789999999999999999999999999999999999999999999999999975

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.58  E-value=5.3e-15  Score=120.05  Aligned_cols=101  Identities=27%  Similarity=0.420  Sum_probs=85.5

Q ss_pred             CCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCC--CCCHHH
Q 043828          420 VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAG--PNGDQT  497 (586)
Q Consensus       420 ~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~--~~~~~~  497 (586)
                      ++.+++..++..++.  +|.|+|+||+.++..  .....+.++.+|+.||+|++|+|+.+||..+|+.++..  ..++.+
T Consensus         6 ~~~~~i~~~~~~~~~--~~~i~f~eF~~~~~~--~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~e   81 (109)
T d1rwya_           6 LSAEDIKKAIGAFTA--ADSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKE   81 (109)
T ss_dssp             SCHHHHHHHHHTTCS--TTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHH
T ss_pred             cCHHHHHHHHHhccc--CCCcCHHHHHHHHcc--ccCCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHHH
Confidence            567888889988754  578999999886543  23457789999999999999999999999999987643  334889


Q ss_pred             HHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          498 IRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       498 ~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ++.+++.+|.|+||+|+|+||+++|..
T Consensus        82 ~~~~~~~~D~d~dG~i~~~EF~~~m~~  108 (109)
T d1rwya_          82 TKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             HHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             HHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            999999999999999999999999864

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.58  E-value=6.1e-16  Score=139.77  Aligned_cols=82  Identities=12%  Similarity=0.192  Sum_probs=52.9

Q ss_pred             HHHHHHhcCCCCCceeHHHHHHHHhcc---------------hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhh
Q 043828          499 RDILRDVDLDRDGRISFEEFKAMMTSG---------------ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNK  563 (586)
Q Consensus       499 ~~~~~~~d~~~dg~i~~~eF~~~~~~~---------------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~  563 (586)
                      ..++...|.+++|.|++++|...+...               ..+..+|+.+|.|++|+|+.+||+.++..+|  ++.++
T Consensus        63 ~~~~~~~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~--l~~~~  140 (185)
T d2sasa_          63 RDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ--LQCAD  140 (185)
T ss_dssp             HHHHHHHCTTCSSCEEHHHHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC--CCCSS
T ss_pred             HHHHHHhCcCCCCcEeeeHhhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcC--CCHHH
Confidence            344555666666667776666665421               2355677777777777777777777766554  56667


Q ss_pred             HHHHHHhhccCCCceEecC
Q 043828          564 SMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       564 ~~~~~~~~d~~~dg~i~~~  582 (586)
                      ++.++..+|.|+||.|++.
T Consensus       141 ~~~~f~~~D~d~dG~i~~~  159 (185)
T d2sasa_         141 VPAVYNVITDGGKVTFDLN  159 (185)
T ss_dssp             HHHHHHHHHTTTTSCCSHH
T ss_pred             HHHHHHHcCCCCCCCCcHH
Confidence            7777777777777777653

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=99.58  E-value=2.2e-15  Score=121.91  Aligned_cols=87  Identities=9%  Similarity=0.114  Sum_probs=77.6

Q ss_pred             CHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc----hHHHHHHHhhhhhccCcccHHHHHHHHHhh---cccCChhhHHH
Q 043828          494 GDQTIRDILRDVDLDRDGRISFEEFKAMMTSG----ADWKMASRQYSRAMMSALSIKLFKDKSMEL---TKSMELNKSME  566 (586)
Q Consensus       494 ~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~----~~~~~~F~~~D~d~~G~i~~~el~~~~~~~---g~~~~~~~~~~  566 (586)
                      ..++|.+++..++.  +|.|+|.||+.++...    +.++.+|+.||+|++|+|+.+||+.+|..+   |..++++++++
T Consensus         7 ~~~di~~~~~~~~~--~G~idf~eF~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~~~e~~~   84 (109)
T d5pala_           7 KADDINKAISAFKD--PGTFDYKRFFHLVGLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKA   84 (109)
T ss_dssp             CHHHHHHHHHHTCS--TTCCCHHHHHHHHTCTTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHH
T ss_pred             cHHHHHHHHHhcCC--CCcCcHHHHHHHHHhcCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCCHHHHHH
Confidence            37789999998864  5789999999988533    779999999999999999999999998765   78899999999


Q ss_pred             HHHhhccCCCceEecC
Q 043828          567 LKKSVELKKSGQLRIP  582 (586)
Q Consensus       567 ~~~~~d~~~dg~i~~~  582 (586)
                      ||+.+|.|+||+|++.
T Consensus        85 ~~~~~D~d~dG~I~~~  100 (109)
T d5pala_          85 LLAAGDSDHDGKIGAD  100 (109)
T ss_dssp             HHHHHCTTCSSSEEHH
T ss_pred             HHHHhCCCCCCCEeHH
Confidence            9999999999999975

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=99.58  E-value=4e-15  Score=132.87  Aligned_cols=122  Identities=10%  Similarity=0.072  Sum_probs=74.8

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcC----CCCCCHH----HHHHHHHH--hcCCCCCceeHHHHHHHHhcc---
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDN----AGPNGDQ----TIRDILRD--VDLDRDGRISFEEFKAMMTSG---  525 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~----~~~~~~~----~~~~~~~~--~d~~~dg~i~~~eF~~~~~~~---  525 (586)
                      ++++.+|+.+|.|++|+|+.+||..++..++    .......    .....+..  .+.+++|.|+++||+..+...   
T Consensus         6 ~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~   85 (174)
T d2scpa_           6 QKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVKN   85 (174)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHhhhcc
Confidence            3456666666666666666666666554332    1111011    11111221  256667778888777776432   


Q ss_pred             --------hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhHHHHHHhhccCCCceEecC
Q 043828          526 --------ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKSMELKKSVELKKSGQLRIP  582 (586)
Q Consensus       526 --------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~  582 (586)
                              ..+..+|+.+|+|++|+|+.+|++.++..+|  ++.+++..+++.+|.|+||.|++.
T Consensus        86 ~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~--~~~~~~~~~f~~~D~d~dG~Is~~  148 (174)
T d2scpa_          86 PEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG--LDKTMAPASFDAIDTNNDGLLSLE  148 (174)
T ss_dssp             GGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT--CCGGGHHHHHHHHCTTCSSEECHH
T ss_pred             hhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHh--hhhHHHHHHHhhcCCCCCCcEeHH
Confidence                    3456678888888888888888887776665  466777788888888888887764

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.55  E-value=8.4e-15  Score=118.44  Aligned_cols=104  Identities=24%  Similarity=0.393  Sum_probs=86.3

Q ss_pred             cCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCC--CC
Q 043828          416 IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAG--PN  493 (586)
Q Consensus       416 ~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~--~~  493 (586)
                      ++..++.++|..++..++  .+|.++|.+|+..+..  .....+.++++|+.||+|++|+|+.+||+.+|..++..  ..
T Consensus         2 ~~d~ls~~dI~~~l~~~~--~~~s~~~~~F~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l   77 (108)
T d1rroa_           2 ITDILSAEDIAAALQECQ--DPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAREL   77 (108)
T ss_dssp             GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHSG--GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCC
T ss_pred             hhhhCCHHHHHHHHHhcc--cCCCccHHHHHHHHcc--CcCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCC
Confidence            345678888999988775  5678999999875432  23466789999999999999999999999999887532  23


Q ss_pred             CHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          494 GDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       494 ~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      ++++++.+++.+|.|+||.|+|+||+.+|.
T Consensus        78 ~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~  107 (108)
T d1rroa_          78 TESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             CHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             CHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence            489999999999999999999999999886

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.54  E-value=4.9e-15  Score=132.42  Aligned_cols=82  Identities=15%  Similarity=0.168  Sum_probs=63.4

Q ss_pred             HHHHHHhcCCCCCceeHHHHHHHHhcc--------------hHHHHHHHhhhhhccCcccHHHHHHHHHhhcccCChhhH
Q 043828          499 RDILRDVDLDRDGRISFEEFKAMMTSG--------------ADWKMASRQYSRAMMSALSIKLFKDKSMELTKSMELNKS  564 (586)
Q Consensus       499 ~~~~~~~d~~~dg~i~~~eF~~~~~~~--------------~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g~~~~~~~~  564 (586)
                      ..++...+.+++|.|++.++...+...              ..++.+|..||.|++|.|+.+|++.++..+|  ++++++
T Consensus        61 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~--~~~~~~  138 (176)
T d1nyaa_          61 DYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEA  138 (176)
T ss_dssp             HHHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CCHHHH
T ss_pred             HHHHHHhcCCCCCcccHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcC--CcHHHH
Confidence            445666677777888888877655422              4467788888888888888888888887776  678888


Q ss_pred             HHHHHhhccCCCceEecC
Q 043828          565 MELKKSVELKKSGQLRIP  582 (586)
Q Consensus       565 ~~~~~~~d~~~dg~i~~~  582 (586)
                      +.++..+|.|+||+|++.
T Consensus       139 ~~~f~~~D~d~dG~i~~~  156 (176)
T d1nyaa_         139 AEAFNQVDTNGNGELSLD  156 (176)
T ss_dssp             HHHHHHHCTTCSSEEEHH
T ss_pred             HHHHHHHCCCCCCcEeHH
Confidence            888888888888888863

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.52  E-value=8.1e-14  Score=125.23  Aligned_cols=135  Identities=16%  Similarity=0.226  Sum_probs=97.9

Q ss_pred             CCCHHHHHHHHH---HhcCC--CCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCC
Q 043828          419 KVSDPDVKMLME---AADVD--GNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPN  493 (586)
Q Consensus       419 ~~~~~~~~~~~~---~~D~d--~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~  493 (586)
                      .++.++++.+++   .+|.+  ++|.|+++||..++...... .......+|+.+|.|++|.|+..||..++..+.....
T Consensus        10 ~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~~~~~~-~~~~~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~~~   88 (183)
T d2zfda1          10 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKK-ESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAP   88 (183)
T ss_dssp             SCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHSCSSC-CCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSC
T ss_pred             CCCHHHHHHHHHHHHHHCcCCCCCCcCcHHHHHHHHHhcCCC-CCHHHHHHHHHHccCCCCcCcHHHHHHHHHhhhccCc
Confidence            456666555544   44544  68899999997765433322 2345678899999999999999999888876544433


Q ss_pred             CHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc--------------hHHHHHHHhhhhhccCcccHHHHHHHHHh
Q 043828          494 GDQTIRDILRDVDLDRDGRISFEEFKAMMTSG--------------ADWKMASRQYSRAMMSALSIKLFKDKSME  554 (586)
Q Consensus       494 ~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~--------------~~~~~~F~~~D~d~~G~i~~~el~~~~~~  554 (586)
                      .++.+..+|..+|.|++|.|+.+|+..++...              +.+..+|+.+|.|++|.|+.+|+.+++..
T Consensus        89 ~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~  163 (183)
T d2zfda1          89 IDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLR  163 (183)
T ss_dssp             HHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            36668888899999999999999888876421              22556788889999999999999888754

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.48  E-value=3.8e-14  Score=103.14  Aligned_cols=64  Identities=34%  Similarity=0.742  Sum_probs=60.9

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM  522 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~  522 (586)
                      +++++++|+.||+|++|+|+.+||+.+++.+|...+ +.++..++..+|.|++|.|+|+||+++|
T Consensus         2 eeel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~-~~e~~~l~~~~D~d~~g~I~~~eF~~~m   65 (65)
T d1fw4a_           2 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT-DEEVDEMIREADIDGDGQVNYEEFVQMM   65 (65)
T ss_dssp             CHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-HHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred             HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCC-HHHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence            578999999999999999999999999999999887 8999999999999999999999999875

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.48  E-value=6e-14  Score=105.20  Aligned_cols=69  Identities=39%  Similarity=0.721  Sum_probs=64.6

Q ss_pred             CCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          455 IGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       455 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ..++++++.+|+.||+|++|+|+..||+.+|+.+|..++ +++++.++..+|.|++|.|+|+||+.+|..
T Consensus         5 ~~~eeel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~-~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~   73 (75)
T d1jc2a_           5 GKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVI-EEDIEDLMKDSDKNNDGRIDFDEFLKMMEG   73 (75)
T ss_dssp             CCCHHHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCC-HHHHHHHHHHHCSSSCSEECHHHHHHHHHT
T ss_pred             CCcHHHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCcc-HHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            356788999999999999999999999999999999887 899999999999999999999999999874

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=99.47  E-value=4.7e-14  Score=107.62  Aligned_cols=69  Identities=30%  Similarity=0.594  Sum_probs=64.5

Q ss_pred             chhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          382 PQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       382 ~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      +++++++++++|+.||.|++|+|+..||+.+|+.+| .++..++..+|+.+|.|++|.|+|+||+.++..
T Consensus         1 T~ee~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg-~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~   69 (81)
T d2opoa1           1 TPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA   69 (81)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh-cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            367889999999999999999999999999999998 689999999999999999999999999987654

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.47  E-value=2e-14  Score=105.56  Aligned_cols=67  Identities=27%  Similarity=0.550  Sum_probs=62.5

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      +++++++|+.||+|++|+|+.+||+.+|+.+|..+.++++++.+|+.+|.|+||.|+|+||+.+|.+
T Consensus         1 eeel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~r   67 (68)
T d1c7va_           1 EEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK   67 (68)
T ss_dssp             CHHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred             CHHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            3679999999999999999999999999999987656999999999999999999999999999874

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.47  E-value=3.7e-14  Score=107.32  Aligned_cols=72  Identities=33%  Similarity=0.579  Sum_probs=68.7

Q ss_pred             cCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhh
Q 043828          379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSV  450 (586)
Q Consensus       379 ~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  450 (586)
                      ..++++++.+++++|..||.|++|+|+..||+.+|+.+|..++..++..++..+|.|++|.|+|+||+.++.
T Consensus         2 ~~lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~   73 (77)
T d1f54a_           2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMS   73 (77)
T ss_dssp             CCCCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            467889999999999999999999999999999999999999999999999999999999999999998764

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=99.47  E-value=4.3e-14  Score=107.78  Aligned_cols=75  Identities=25%  Similarity=0.509  Sum_probs=69.6

Q ss_pred             hcccCCchhhHhHHHHhhhhccCCC-CCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhh
Q 043828          376 VVADNLPQDQMAQIKQMFYMMDTDK-NGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSV  450 (586)
Q Consensus       376 ~~~~~l~~~~~~~~~~~F~~~D~~~-~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  450 (586)
                      .....+++++++.++++|..||.++ +|+|+..||+.+|+.+|.+++..+++.+++.+|.|++|.|+|+||+.++.
T Consensus         4 ~~~~~ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~   79 (82)
T d1wrka1           4 AAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV   79 (82)
T ss_dssp             HHHHHCCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHH
T ss_pred             HHHhhCCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            3455788999999999999999995 89999999999999999999999999999999999999999999998664

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.45  E-value=2.2e-14  Score=110.93  Aligned_cols=75  Identities=37%  Similarity=0.777  Sum_probs=70.9

Q ss_pred             hhcccCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhh
Q 043828          375 RVVADNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMS  449 (586)
Q Consensus       375 ~~~~~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~  449 (586)
                      ..++..++++++..++++|..||.|++|+|+..||+.+|+.+|..+++++++.+|+.+|.|++|.|+|+||+.++
T Consensus        11 ~~ma~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~am   85 (87)
T d1s6ja_          11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             HHSSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HHHHhhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence            457788889999999999999999999999999999999999999999999999999999999999999998754

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=99.45  E-value=1e-13  Score=105.66  Aligned_cols=75  Identities=28%  Similarity=0.379  Sum_probs=64.0

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc-hHHHHHHHh
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG-ADWKMASRQ  534 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~-~~~~~~F~~  534 (586)
                      ..+++++|+.||.|++|+|+..||..+|+.+| .++ +.++..+|..+|.|++|.|+|+||+.++... ...+.+++.
T Consensus         5 ~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg-~~~-~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~e~~~~   80 (81)
T d2opoa1           5 IADRERIFKRFDTNGDGKISSSELGDALKTLG-SVT-PDEVRRMMAEIDTDGDGFISFDEFTDFARANRGLVKDVSKI   80 (81)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCC-HHHHHHHHHHHCTTCSSEECHHHHHHHHHHCTTTHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhh-cCC-HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHCccchHHHHhh
Confidence            35689999999999999999999999999998 455 8899999999999999999999999998754 233444443

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.45  E-value=7.6e-14  Score=106.42  Aligned_cols=70  Identities=33%  Similarity=0.631  Sum_probs=67.1

Q ss_pred             CchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhh
Q 043828          381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSV  450 (586)
Q Consensus       381 l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  450 (586)
                      ++++++.+++++|..||.|++|+|+..||+.+|+.+|.++++.++..+|..+|.|++|.|+|+||+.++.
T Consensus         8 Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~   77 (81)
T d1avsa_           8 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV   77 (81)
T ss_dssp             BCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            6788999999999999999999999999999999999999999999999999999999999999998664

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=99.44  E-value=5.7e-14  Score=104.92  Aligned_cols=71  Identities=31%  Similarity=0.608  Sum_probs=67.5

Q ss_pred             CCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhh
Q 043828          380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSV  450 (586)
Q Consensus       380 ~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  450 (586)
                      +++++++.+++++|..||.|++|+|+..||..+|..+|..++++++..+++.+|.|++|.|+|+||+.++.
T Consensus         1 qLs~eei~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~   71 (73)
T d2pq3a1           1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA   71 (73)
T ss_dssp             CCCHHHHHHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            36788999999999999999999999999999999999999999999999999999999999999998664

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.44  E-value=3.2e-14  Score=110.05  Aligned_cols=85  Identities=26%  Similarity=0.384  Sum_probs=71.7

Q ss_pred             CCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCcee
Q 043828          435 DGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRIS  514 (586)
Q Consensus       435 d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~  514 (586)
                      +.+|.|+.++...+  ..........++++|+.||+|++|+|+.+||+.+|+.+|..++ +.+++.+++.+|.|++|.|+
T Consensus         1 ~~~g~id~~~~~ma--~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s-~~e~~~l~~~~D~d~~g~I~   77 (87)
T d1s6ja_           1 HSSGHIDDDDKHMA--ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELM-ESEIKDLMDAADIDKSGTID   77 (87)
T ss_dssp             CCSSSSSSHHHHSS--SSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCC-HHHHHHHHHHHCTTCSSEEC
T ss_pred             CCCCccCchHHHHH--hhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCC-HHHHHHHHHHcCCCCCCeEe
Confidence            46799999886532  2222233346899999999999999999999999999999887 88999999999999999999


Q ss_pred             HHHHHHHH
Q 043828          515 FEEFKAMM  522 (586)
Q Consensus       515 ~~eF~~~~  522 (586)
                      |+||+.+|
T Consensus        78 ~~EFl~am   85 (87)
T d1s6ja_          78 YGEFIAAT   85 (87)
T ss_dssp             HHHHTTCC
T ss_pred             HHHHHHHH
Confidence            99998765

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=99.44  E-value=1.4e-13  Score=104.94  Aligned_cols=69  Identities=35%  Similarity=0.661  Sum_probs=64.4

Q ss_pred             CCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          455 IGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       455 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ..++++++++|+.||+|++|+|+..||+.+|+.+|..++ +.+++.+|..+|.|+||+|+|+||+.+|..
T Consensus        11 ~~~ee~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~-~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~   79 (81)
T d1fi5a_          11 GKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETIT-EDDIEELMKDGDKNNDGRIDYDEFLEFMKG   79 (81)
T ss_dssp             CCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCC-HHHHHHHHHHHCSSSSSSEEHHHHHHHHSC
T ss_pred             CCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCC-HHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence            346778999999999999999999999999999998877 899999999999999999999999999874

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.3e-13  Score=123.23  Aligned_cols=105  Identities=13%  Similarity=0.184  Sum_probs=79.9

Q ss_pred             CCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCC-CCCceeHHHHHHHHhcc-------hHHHHHHHhhhhhccCccc
Q 043828          473 SGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLD-RDGRISFEEFKAMMTSG-------ADWKMASRQYSRAMMSALS  544 (586)
Q Consensus       473 ~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~-~dg~i~~~eF~~~~~~~-------~~~~~~F~~~D~d~~G~i~  544 (586)
                      .|+++.+++..+. .+..++.    ++.++..+|.| ++|.|+|+||+..+...       +.++.+|+.||.|++|+|+
T Consensus        39 ~~~i~~~e~~~~~-~l~~~~~----~~rif~~fd~~~~~g~I~f~EFv~~l~~~~~~~~~~~kl~~~F~~~D~d~~G~I~  113 (180)
T d1xo5a_          39 RAQVPFEQILSLP-ELKANPF----KERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLN  113 (180)
T ss_dssp             HCCEEHHHHHTSH-HHHTCTT----HHHHHHHHCCSTTCCEECHHHHHHHHHHHSTTSCHHHHHHHHHHHHCTTCSSSBC
T ss_pred             cceEcHHHHhcCc-ccccChH----HHHHHHhccCCCCCCcCcHHHHHHHHHHHhhcCCHHHHHHHhhccccCCCCCeee
Confidence            3556777775533 2233333    56788889987 68999999999877421       5688899999999999999


Q ss_pred             HHHHHHHHHhh-----cccCChhhHH----HHHHhhccCCCceEecC
Q 043828          545 IKLFKDKSMEL-----TKSMELNKSM----ELKKSVELKKSGQLRIP  582 (586)
Q Consensus       545 ~~el~~~~~~~-----g~~~~~~~~~----~~~~~~d~~~dg~i~~~  582 (586)
                      .+|+..++..+     +..+++++++    .+++.+|.|+||+|++.
T Consensus       114 ~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~dG~Is~~  160 (180)
T d1xo5a_         114 REDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS  160 (180)
T ss_dssp             HHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCSSSBCHH
T ss_pred             HHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCCCcCcHH
Confidence            99999998876     5567777754    57788999999999874

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.42  E-value=1.7e-13  Score=110.28  Aligned_cols=86  Identities=12%  Similarity=0.084  Sum_probs=76.9

Q ss_pred             HHHHHHHHHHhcCCCCCceeHHHHHHHHhcc----hHHHHHHHhhhhhccCcccHHHHHHHHHhhc---ccCChhhHHHH
Q 043828          495 DQTIRDILRDVDLDRDGRISFEEFKAMMTSG----ADWKMASRQYSRAMMSALSIKLFKDKSMELT---KSMELNKSMEL  567 (586)
Q Consensus       495 ~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~----~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g---~~~~~~~~~~~  567 (586)
                      ++++..++...+.+  |.|+|.||+..+...    +.++.+|+.||+|++|+|+.+||+.++..++   ..++++++++|
T Consensus         7 ~~di~~~~~~~~~~--gsi~~~eF~~~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~~~~~~~~~~~l   84 (107)
T d2pvba_           7 DADVAAALAACSAA--DSFKHKEFFAKVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAF   84 (107)
T ss_dssp             HHHHHHHHHHTCST--TCCCHHHHHHHHTGGGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCCHHHHHHH
T ss_pred             HHHHHHHHHhccCC--CCcCHHHHHHHHhcccCCHHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhcccccCCHHHHHHH
Confidence            78899999998764  579999999987643    7799999999999999999999999998874   56899999999


Q ss_pred             HHhhccCCCceEecC
Q 043828          568 KKSVELKKSGQLRIP  582 (586)
Q Consensus       568 ~~~~d~~~dg~i~~~  582 (586)
                      |+.+|.|+||+|++.
T Consensus        85 ~~~~D~d~dG~I~~~   99 (107)
T d2pvba_          85 LADGDKDGDGMIGVD   99 (107)
T ss_dssp             HHHHCTTCSSSBCHH
T ss_pred             HHHhCCCCCCcEeHH
Confidence            999999999999874

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=9.7e-15  Score=129.16  Aligned_cols=135  Identities=7%  Similarity=0.154  Sum_probs=94.3

Q ss_pred             HHHHhhhh--ccCCCCCCcCHHHHHHHHHhcCCCC--CHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHH
Q 043828          388 QIKQMFYM--MDTDKNGDLTFEELKDGLNMIGQKV--SDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQ  463 (586)
Q Consensus       388 ~~~~~F~~--~D~~~~G~i~~~el~~~l~~~~~~~--~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~  463 (586)
                      .++++|..  +|.|++|.|+..||..++...+...  ..+.+..++...|.+++|.|+|+||...+....   ...++..
T Consensus         6 ~l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~---~r~ei~~   82 (170)
T d2zkmx1           6 FLDKILVKLKMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC---PRPEIDE   82 (170)
T ss_dssp             HHHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS---CCHHHHT
T ss_pred             HHHHHHHHHhcccCCCCCCcHHHHHHHHHHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccC---CHHHHHH
Confidence            35556665  7999999999999999987653322  234567778888999999999999998776543   3567999


Q ss_pred             HHhhhcCCCCCcccHHHHHHHHHhcCCCC---------CCHHHHHHHHHHhcCCC----CCceeHHHHHHHHhcc
Q 043828          464 AFRFFDKNQSGFIEVDELKEVLLEDNAGP---------NGDQTIRDILRDVDLDR----DGRISFEEFKAMMTSG  525 (586)
Q Consensus       464 ~F~~~D~d~~G~i~~~el~~~l~~~~~~~---------~~~~~~~~~~~~~d~~~----dg~i~~~eF~~~~~~~  525 (586)
                      +|..+|.|++|+||.+||..+|......+         .+.+.+..++..+..+.    +|.|++++|..++...
T Consensus        83 ~F~~~d~d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ls~d~F~~fL~S~  157 (170)
T d2zkmx1          83 IFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCGP  157 (170)
T ss_dssp             TCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHHST
T ss_pred             HHHHHcCCCCCcccHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHHccccccccCCeECHHHHHHHHcCc
Confidence            99999999999999999999998765432         23567888999887764    4889999999988653

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.41  E-value=1.7e-13  Score=110.96  Aligned_cols=87  Identities=8%  Similarity=0.122  Sum_probs=76.4

Q ss_pred             HHHHHHHHHHhcCCCCCceeHHHHHHHHhcc----hHHHHHHHhhhhhccCcccHHHHHHHHHhhc---ccCChhhHHHH
Q 043828          495 DQTIRDILRDVDLDRDGRISFEEFKAMMTSG----ADWKMASRQYSRAMMSALSIKLFKDKSMELT---KSMELNKSMEL  567 (586)
Q Consensus       495 ~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~----~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g---~~~~~~~~~~~  567 (586)
                      .+++..++..++.  +|.|+|.||+.++...    ..++.+|+.||+|++|+|+.+||+.++..++   ..+++++++.|
T Consensus         8 ~~~i~~~~~~~~~--~~~i~f~eF~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~~~~e~~~~   85 (109)
T d1rwya_           8 AEDIKKAIGAFTA--ADSFDHKKFFQMVGLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTL   85 (109)
T ss_dssp             HHHHHHHHHTTCS--TTCCCHHHHHHHHTGGGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCCCHHHHHHH
T ss_pred             HHHHHHHHHhccc--CCCcCHHHHHHHHccccCCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccCCHHHHHHH
Confidence            7788889988754  5789999999988533    7789999999999999999999999998874   46899999999


Q ss_pred             HHhhccCCCceEecCC
Q 043828          568 KKSVELKKSGQLRIPH  583 (586)
Q Consensus       568 ~~~~d~~~dg~i~~~~  583 (586)
                      ++.+|.|+||+|++.+
T Consensus        86 ~~~~D~d~dG~i~~~E  101 (109)
T d1rwya_          86 MAAGDKDGDGKIGVEE  101 (109)
T ss_dssp             HHHHCTTCSSSEEHHH
T ss_pred             HHHhCCCCCCeEeHHH
Confidence            9999999999999853

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.40  E-value=2.8e-13  Score=103.19  Aligned_cols=65  Identities=34%  Similarity=0.537  Sum_probs=61.4

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ++++++|+.||.|++|+|+..||..+|+.+|..++ +.++..++..+|.|++|.|+|+||+.+|..
T Consensus        14 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s-~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~   78 (81)
T d1avsa_          14 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPT-KEELDAIIEEVDEDGSGTIDFEEFLVMMVR   78 (81)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-HHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCC-HHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            46889999999999999999999999999999887 899999999999999999999999999874

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=99.40  E-value=3.3e-13  Score=132.77  Aligned_cols=131  Identities=23%  Similarity=0.391  Sum_probs=111.2

Q ss_pred             HhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhhccCCchhHHHHHH
Q 043828          386 MAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAF  465 (586)
Q Consensus       386 ~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F  465 (586)
                      ...+...|..+|.+++|.++..++...+...+.. .......++..++.+.+|.+.+.+|........      .+..+|
T Consensus       187 ~~~~~~~F~~~d~d~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~------~~~~~F  259 (321)
T d1ij5a_         187 LAALVADFRKIDTNSNGTLSRKEFREHFVRLGFD-KKSVQDALFRYADEDESDDVGFSEYVHLGLCLL------VLRILY  259 (321)
T ss_dssp             HHTSCCCHHHHCTTCCSEECHHHHHHHHHHTTCC-CHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH------HHHHHH
T ss_pred             hhhhhHHHHHHhhcccccchhHHHhhhhhccccc-chHHHHHHHHhhhcccccccccccccchhhhhh------HHHHHH
Confidence            3456678999999999999999999999887765 556778889999999999999999987554332      367789


Q ss_pred             hhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          466 RFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       466 ~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      ..+|.|++|+|+..||..+|..+|....+..++..+|..+|.|+||.|+|+||+.+|.
T Consensus       260 ~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~ml  317 (321)
T d1ij5a_         260 AFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVL  317 (321)
T ss_dssp             HHTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHH
T ss_pred             HHHhcCCCCCCcHHHHHHHHHHcCCCcCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            9999999999999999999999887534467789999999999999999999999875

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=99.40  E-value=3.2e-13  Score=102.03  Aligned_cols=69  Identities=25%  Similarity=0.490  Sum_probs=64.1

Q ss_pred             CCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          455 IGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       455 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ..++++++++|+.||+|++|+|+.+||..+|+.+|...+ ..++..+++.+|.|++|.|+|+||+.+|.+
T Consensus         5 ~d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~-~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k   73 (77)
T d1oqpa_           5 RDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLT-EEELQEMIAEADRNDDNEIDEDEFIRIMKK   73 (77)
T ss_dssp             SSHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCC-HHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence            345678999999999999999999999999999998877 889999999999999999999999999874

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=99.39  E-value=3.5e-13  Score=102.61  Aligned_cols=66  Identities=27%  Similarity=0.503  Sum_probs=61.7

Q ss_pred             hhHHHHHHhhhcCCC-CCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          458 DDILSQAFRFFDKNQ-SGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~-~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      .++++++|+.||+|| +|+|+..||+.+|+.+|..++ +.+++.++..+|.|+||.|+|+||+.+|.+
T Consensus        14 ~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t-~~el~~~i~~~D~d~~G~I~f~eFl~im~~   80 (82)
T d1wrka1          14 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPT-PEELQEMIDEVDEDGSGTVDFDEFLVMMVR   80 (82)
T ss_dssp             HHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCC-HHHHHHHHHTTCTTCCSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCC-HHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            357899999999996 799999999999999999987 899999999999999999999999999874

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.39  E-value=3.7e-13  Score=98.54  Aligned_cols=63  Identities=27%  Similarity=0.513  Sum_probs=59.9

Q ss_pred             HHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       461 ~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ++++|+.||+|++|+|+..||..+++.+|...+ +++++.++..+|.|+||.|+|+||+.+|.+
T Consensus         3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~-~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~   65 (67)
T d1tiza_           3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFT-QEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSC-HHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHCCCCcCcCcHHHHHHHHHHhccccc-hHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            689999999999999999999999999998877 899999999999999999999999999864

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.39  E-value=2.9e-13  Score=96.89  Aligned_cols=61  Identities=26%  Similarity=0.556  Sum_probs=57.9

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHH
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKA  520 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~  520 (586)
                      ++++++|+.||++++|+|+.+||+.+|+.+|...+ +.++..+++.+|.|++|.|+|+||+.
T Consensus         1 Eel~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~-~~ei~~l~~~~D~d~dg~I~~~eFl~   61 (61)
T d2fcea1           1 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLT-DAEVDELLKGVEVDSNGEIDYKKFIE   61 (61)
T ss_dssp             HHHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCC-HHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred             ChHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCC-HHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence            46899999999999999999999999999998887 89999999999999999999999974

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.39  E-value=3.6e-13  Score=101.70  Aligned_cols=65  Identities=31%  Similarity=0.609  Sum_probs=61.6

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ++++++|+.||.|++|+|+..||..+|+.+|..++ +.++..++..+|.|++|.|+|+||+.+|..
T Consensus        10 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t-~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~   74 (77)
T d1f54a_          10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPS-EAEVNDLMNEIDVDGNHQIEFSEFLALMSR   74 (77)
T ss_dssp             HHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCC-HHHHHHHHHTTCCSSCCEEEHHHHHHHHTT
T ss_pred             HHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            46899999999999999999999999999999887 899999999999999999999999999864

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=99.37  E-value=3.3e-13  Score=100.65  Aligned_cols=65  Identities=34%  Similarity=0.619  Sum_probs=61.4

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      .+++++|+.||+|++|+|+..||..+|+.+|..++ ++++..++..+|.|++|.|+|+||+.+|..
T Consensus         8 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s-~~~~~~~~~~~D~d~~g~I~f~eF~~~m~~   72 (73)
T d2pq3a1           8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT-EAELQDMINEVDADGNGTIDFPEFLTMMAR   72 (73)
T ss_dssp             HHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCC-HHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCC-HHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            46899999999999999999999999999999887 899999999999999999999999999864

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.37  E-value=4.1e-13  Score=100.54  Aligned_cols=65  Identities=28%  Similarity=0.512  Sum_probs=61.8

Q ss_pred             hHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          387 AQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       387 ~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      ++++++|+.||.|++|+|+..||+.+|+.+|..++.++++.+++.+|.|++|+|+|+||+.++..
T Consensus         9 eel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~   73 (75)
T d1jc2a_           9 EELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG   73 (75)
T ss_dssp             HHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHT
T ss_pred             HHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            47899999999999999999999999999999999999999999999999999999999987654

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.37  E-value=4e-13  Score=97.62  Aligned_cols=62  Identities=34%  Similarity=0.690  Sum_probs=59.7

Q ss_pred             hHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhh
Q 043828          387 AQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTM  448 (586)
Q Consensus       387 ~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~  448 (586)
                      ++++++|+.||.|++|+|+.+||+.+++.+|..+++.++..+++.+|.|++|.|+|+||+.+
T Consensus         3 eel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~   64 (65)
T d1fw4a_           3 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM   64 (65)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHH
Confidence            46899999999999999999999999999999999999999999999999999999999875

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=99.36  E-value=4.3e-13  Score=102.15  Aligned_cols=65  Identities=28%  Similarity=0.555  Sum_probs=61.7

Q ss_pred             hHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          387 AQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       387 ~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      ++++++|..||.|++|+|+..||+.+|+.+|.+++.++++.+|+.+|.|+||+|+|+||+.++..
T Consensus        15 e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~   79 (81)
T d1fi5a_          15 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG   79 (81)
T ss_dssp             HHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHSC
T ss_pred             HHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence            57899999999999999999999999999999999999999999999999999999999987643

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.35  E-value=5e-13  Score=107.82  Aligned_cols=86  Identities=10%  Similarity=0.063  Sum_probs=75.3

Q ss_pred             HHHHHHHHHHhcCCCCCceeHHHHHHHHhcc----hHHHHHHHhhhhhccCcccHHHHHHHHHhh---cccCChhhHHHH
Q 043828          495 DQTIRDILRDVDLDRDGRISFEEFKAMMTSG----ADWKMASRQYSRAMMSALSIKLFKDKSMEL---TKSMELNKSMEL  567 (586)
Q Consensus       495 ~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~----~~~~~~F~~~D~d~~G~i~~~el~~~~~~~---g~~~~~~~~~~~  567 (586)
                      .++|..++..++.  +|.++|.+|...+...    +.++++|+.||+|++|+|+.+||+.++..+   |..+++++++.|
T Consensus         8 ~~dI~~~l~~~~~--~~s~~~~~F~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~~~~~~~~   85 (108)
T d1rroa_           8 AEDIAAALQECQD--PDTFEPQKFFQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSL   85 (108)
T ss_dssp             HHHHHHHHHHTCS--TTCCCHHHHHHHHSGGGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHH
T ss_pred             HHHHHHHHHhccc--CCCccHHHHHHHHccCcCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCCCHHHHHHH
Confidence            7889998888764  5679999998775322    779999999999999999999999999876   557899999999


Q ss_pred             HHhhccCCCceEecC
Q 043828          568 KKSVELKKSGQLRIP  582 (586)
Q Consensus       568 ~~~~d~~~dg~i~~~  582 (586)
                      ++.+|.|+||+|++.
T Consensus        86 ~~~~D~d~dG~I~~~  100 (108)
T d1rroa_          86 MDAADNDGDGKIGAD  100 (108)
T ss_dssp             HHHHCCSSSSSEEHH
T ss_pred             HHHhCCCCCCeEeHH
Confidence            999999999999975

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.35  E-value=5.5e-13  Score=97.58  Aligned_cols=64  Identities=30%  Similarity=0.522  Sum_probs=60.4

Q ss_pred             HHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          388 QIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       388 ~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      .++++|+.+|.|++|+|+..||+.+++.+|..+++++++.+|+.+|.|+||.|+|+||+.++..
T Consensus         2 ~~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~   65 (67)
T d1tiza_           2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             hHHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            3689999999999999999999999999999999999999999999999999999999987643

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.34  E-value=5.1e-13  Score=95.59  Aligned_cols=61  Identities=25%  Similarity=0.550  Sum_probs=58.5

Q ss_pred             hHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHh
Q 043828          387 AQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVT  447 (586)
Q Consensus       387 ~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~  447 (586)
                      ++++++|+.||.+++|+|+..||+.+|+.+|.+++..++..+|+.+|.|++|.|+|+||+.
T Consensus         1 Eel~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~   61 (61)
T d2fcea1           1 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE   61 (61)
T ss_dssp             HHHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred             ChHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence            3688999999999999999999999999999999999999999999999999999999974

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=99.33  E-value=1.1e-12  Score=99.05  Aligned_cols=68  Identities=21%  Similarity=0.482  Sum_probs=63.4

Q ss_pred             hhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       384 ~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      +..++++++|..||.|++|+|+..||..+|+.+|..++..++..+|+.+|.|++|.|+|+||+.++..
T Consensus         6 d~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k   73 (77)
T d1oqpa_           6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK   73 (77)
T ss_dssp             SHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence            44568999999999999999999999999999999999999999999999999999999999987643

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.31  E-value=5.2e-13  Score=97.78  Aligned_cols=64  Identities=30%  Similarity=0.581  Sum_probs=59.8

Q ss_pred             hHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCC-CCHHHHHHHHHHhcCCCCCcccHhHHHhhhh
Q 043828          387 AQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQK-VSDPDVKMLMEAADVDGNGLLSCDEFVTMSV  450 (586)
Q Consensus       387 ~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  450 (586)
                      ++++++|+.||.+++|+|+.+||+.+|+.+|.. ++.++++.+|+.+|.|+||.|+|+||+.++.
T Consensus         2 eel~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~   66 (68)
T d1c7va_           2 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK   66 (68)
T ss_dssp             HHHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            468899999999999999999999999999875 7999999999999999999999999998764

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1e-13  Score=122.40  Aligned_cols=123  Identities=12%  Similarity=0.056  Sum_probs=82.7

Q ss_pred             HHHHHHhh--hcCCCCCcccHHHHHHHHHhcCCCCC-CHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc---hHHHHHHH
Q 043828          460 ILSQAFRF--FDKNQSGFIEVDELKEVLLEDNAGPN-GDQTIRDILRDVDLDRDGRISFEEFKAMMTSG---ADWKMASR  533 (586)
Q Consensus       460 ~~~~~F~~--~D~d~~G~i~~~el~~~l~~~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~---~~~~~~F~  533 (586)
                      .++++|..  +|.|++|.|+.+||.+++...+.... ..+.+..++...|.+++|.|+|+||..++...   +++..+|.
T Consensus         6 ~l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~r~ei~~~F~   85 (170)
T d2zkmx1           6 FLDKILVKLKMQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCPRPEIDEIFT   85 (170)
T ss_dssp             HHHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSCCHHHHTTCC
T ss_pred             HHHHHHHHHhcccCCCCCCcHHHHHHHHHHhhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccCCHHHHHHHHH
Confidence            35666665  79999999999999998864322111 12344556777899999999999999888743   88999999


Q ss_pred             hhhhhccCcccHHHHHHHHHhhcc----------cCChhhHHHHHHhhccCCC----ceEecC
Q 043828          534 QYSRAMMSALSIKLFKDKSMELTK----------SMELNKSMELKKSVELKKS----GQLRIP  582 (586)
Q Consensus       534 ~~D~d~~G~i~~~el~~~~~~~g~----------~~~~~~~~~~~~~~d~~~d----g~i~~~  582 (586)
                      .||.|++|+|+.+||+.+|.....          .++.+.+.++|..+..+.+    |.|+++
T Consensus        86 ~~d~d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ls~d  148 (170)
T d2zkmx1          86 SYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPE  148 (170)
T ss_dssp             --------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHH
T ss_pred             HHcCCCCCcccHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHHccccccccCCeECHH
Confidence            999999999999999999976543          3578899999999877655    777764

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.25  E-value=2.3e-12  Score=96.77  Aligned_cols=69  Identities=30%  Similarity=0.478  Sum_probs=59.6

Q ss_pred             CchhHHHHHHhhhcCC--CCCcccHHHHHHHHHhcCCCCC-CHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          456 GNDDILSQAFRFFDKN--QSGFIEVDELKEVLLEDNAGPN-GDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~d--~~G~i~~~el~~~l~~~~~~~~-~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      .+.++++++|+.||.+  ++|+|+.+||+.+|+.+|..++ .+.++..++..+|.|+||.|+|+||+.+|.+
T Consensus         2 ~s~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~   73 (76)
T d1qx2a_           2 KSPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK   73 (76)
T ss_dssp             CCHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHH
Confidence            3567899999999764  4699999999999999987665 2457999999999999999999999999864

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=3.2e-11  Score=92.31  Aligned_cols=65  Identities=25%  Similarity=0.273  Sum_probs=61.2

Q ss_pred             hHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhh
Q 043828          385 QMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMS  449 (586)
Q Consensus       385 ~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~  449 (586)
                      ....+.++|..+|.+++|+|+.+||+.+|..++..+++++++.+|..+|.|++|.|+|.||+..+
T Consensus        18 ~~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f   82 (83)
T d1wlza1          18 HYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF   82 (83)
T ss_dssp             THHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence            34678999999999999999999999999999999999999999999999999999999998753

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=4.1e-11  Score=91.64  Aligned_cols=64  Identities=16%  Similarity=0.346  Sum_probs=60.1

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHH
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMM  522 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~  522 (586)
                      ...++++|+.+|.+++|+|+.+||+.+|..++...+ ++++..++..+|.|++|.|+|.||+..+
T Consensus        19 ~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~-~~e~~~l~~~~d~~~~g~I~y~eFl~~f   82 (83)
T d1wlza1          19 YHAITQEFENFDTMKTNTISREEFRAICNRRVQILT-DEQFDRLWNEMPVNAKGRLKYPDFLSRF   82 (83)
T ss_dssp             HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCC-HHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCC-hhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence            456899999999999999999999999999998877 9999999999999999999999999876

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=4.5e-11  Score=93.68  Aligned_cols=67  Identities=19%  Similarity=0.264  Sum_probs=62.0

Q ss_pred             CchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhh
Q 043828          381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMS  449 (586)
Q Consensus       381 l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~  449 (586)
                      +++++.+.++++|+.+|.|++|+|+.+|+..++..++  ++.+++.++|+.+|.|+||.|+++||+.++
T Consensus         4 lt~~e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~am   70 (95)
T d1c07a_           4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLKTG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAF   70 (95)
T ss_dssp             SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHTTT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcC--CCHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence            5678889999999999999999999999999999875  678999999999999999999999998755

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.10  E-value=2.1e-11  Score=91.37  Aligned_cols=66  Identities=24%  Similarity=0.398  Sum_probs=57.2

Q ss_pred             HhHHHHhhhhccCC--CCCCcCHHHHHHHHHhcCCCCC--HHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          386 MAQIKQMFYMMDTD--KNGDLTFEELKDGLNMIGQKVS--DPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       386 ~~~~~~~F~~~D~~--~~G~i~~~el~~~l~~~~~~~~--~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      .++++++|+.||.+  ++|+|+.+||+.+|+.+|.+++  ..+++.+|+.+|.|+||.|+|+||+.++..
T Consensus         4 ~eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~   73 (76)
T d1qx2a_           4 PEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK   73 (76)
T ss_dssp             HHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHH
Confidence            45789999999765  4799999999999999987765  447999999999999999999999987654

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.07  E-value=8.9e-11  Score=91.41  Aligned_cols=67  Identities=21%  Similarity=0.260  Sum_probs=62.1

Q ss_pred             CchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhh
Q 043828          381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMS  449 (586)
Q Consensus       381 l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~  449 (586)
                      +++++.+.++++|..+|.|++|+|+.+|++.++.+++  ++..++..+++.+|.|++|.|+|+||+.++
T Consensus         3 ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~   69 (92)
T d1fi6a_           3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAF   69 (92)
T ss_dssp             CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHHcc--CCHHHHHHHHHHhCCCCCCeecHHHHHHHH
Confidence            5678889999999999999999999999999999875  678999999999999999999999998654

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.03  E-value=6.8e-11  Score=88.69  Aligned_cols=69  Identities=23%  Similarity=0.496  Sum_probs=57.2

Q ss_pred             CchhHHHHHHhhhcC-C-CCCcccHHHHHHHHHhcCCCC-CCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          456 GNDDILSQAFRFFDK-N-QSGFIEVDELKEVLLEDNAGP-NGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~-d-~~G~i~~~el~~~l~~~~~~~-~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ...++++.+|..||. + ++|+|+.+||+.+|+.+.... .++.+++.++..+|.|+||.|+|+||+.+|.+
T Consensus         4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~   75 (78)
T d1cb1a_           4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKK   75 (78)
T ss_dssp             CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            456789999999975 4 458999999999999874332 23556899999999999999999999999864

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=99.02  E-value=3.5e-10  Score=88.12  Aligned_cols=67  Identities=21%  Similarity=0.421  Sum_probs=58.1

Q ss_pred             hHHHHHHhhh-cCCCC-CcccHHHHHHHHHhcCCC----CCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          459 DILSQAFRFF-DKNQS-GFIEVDELKEVLLEDNAG----PNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       459 ~~~~~~F~~~-D~d~~-G~i~~~el~~~l~~~~~~----~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      +.+.++|..| |+||+ |+|+.+||+.+|..++..    +.+++++..+|+.+|.|+||.|+|+||+.+|...
T Consensus         9 ~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l   81 (93)
T d1zfsa1           9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL   81 (93)
T ss_dssp             HHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence            5688899988 88885 999999999999886532    3358899999999999999999999999999754

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=99.01  E-value=1.1e-10  Score=90.35  Aligned_cols=67  Identities=19%  Similarity=0.233  Sum_probs=57.9

Q ss_pred             hhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhc-----CCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          384 DQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMI-----GQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       384 ~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~-----~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      ..++.+..+|+.||.| +|+|+.+||+.+|...     +...+...++++|+.+|.|+||.|+|+||+.++..
T Consensus         6 ~~ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~   77 (92)
T d1a4pa_           6 HAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG   77 (92)
T ss_dssp             HHHHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHH
Confidence            3567899999999987 8999999999999874     34456788999999999999999999999886544

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.00  E-value=6.4e-11  Score=88.87  Aligned_cols=68  Identities=22%  Similarity=0.301  Sum_probs=57.9

Q ss_pred             hhHhHHHHhhhhccC--CCCCCcCHHHHHHHHHhc--CCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          384 DQMAQIKQMFYMMDT--DKNGDLTFEELKDGLNMI--GQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       384 ~~~~~~~~~F~~~D~--~~~G~i~~~el~~~l~~~--~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      .....+..+|+.||.  ++.|+|+.+||+.+|+.+  +...+.++++.+|..+|.|+||.|+|+||+.++..
T Consensus         4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~   75 (78)
T d1cb1a_           4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKK   75 (78)
T ss_dssp             CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            456789999999975  345899999999999987  44556778999999999999999999999987654

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=98.99  E-value=2.8e-10  Score=88.68  Aligned_cols=68  Identities=24%  Similarity=0.316  Sum_probs=58.5

Q ss_pred             hhHhHHHHhhhhc-cCCCC-CCcCHHHHHHHHHhcC-----CCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          384 DQMAQIKQMFYMM-DTDKN-GDLTFEELKDGLNMIG-----QKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       384 ~~~~~~~~~F~~~-D~~~~-G~i~~~el~~~l~~~~-----~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      ..+..+.++|+.| |.|++ |+|+.+||+.+|..++     ...+.++++.+|+.+|.|+||.|+|+||+.++..
T Consensus         6 ~~i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~   80 (93)
T d1zfsa1           6 TAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA   80 (93)
T ss_dssp             HHHHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence            3457899999998 88875 9999999999998864     3457889999999999999999999999986644

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=98.99  E-value=2.6e-10  Score=89.36  Aligned_cols=68  Identities=13%  Similarity=0.221  Sum_probs=57.9

Q ss_pred             hhHhHHHHhhhhc-cCCCC-CCcCHHHHHHHHHhcCC--CCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          384 DQMAQIKQMFYMM-DTDKN-GDLTFEELKDGLNMIGQ--KVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       384 ~~~~~~~~~F~~~-D~~~~-G~i~~~el~~~l~~~~~--~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      ..+..+.++|+.| |.+++ |+|+..||+.+|+.++.  ..+.++++.+|..+|.|+||.|+|+||+.++..
T Consensus        11 ~~i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~   82 (98)
T d1yuta1          11 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE   82 (98)
T ss_dssp             HHHHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence            4567899999998 77775 99999999999988643  346667999999999999999999999987644

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=4.6e-10  Score=87.58  Aligned_cols=66  Identities=23%  Similarity=0.286  Sum_probs=60.5

Q ss_pred             CchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhh
Q 043828          381 LPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMS  449 (586)
Q Consensus       381 l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~  449 (586)
                      ++.++...++++|+.+| +++|+|+.+|++.+|.+.|  ++.++++.++..+|.|+||.|+++||+.++
T Consensus         4 ls~ee~~~y~~~F~~~D-~~~G~i~~~el~~~l~~~g--l~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~   69 (95)
T d2jxca1           4 VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLNSK--LPVDILGRVWELSDIDHDGMLDRDEFAVAM   69 (95)
T ss_dssp             SCHHHHHHHHHHHHHTC-CBTTEEEHHHHHHHHTTSS--CCHHHHHHHHHHHCTTCSSEEEHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhC-CCCCceeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCeEcHHHHHHHH
Confidence            56788899999999999 8999999999999999876  578899999999999999999999998654

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=98.95  E-value=4.2e-10  Score=88.16  Aligned_cols=66  Identities=15%  Similarity=0.379  Sum_probs=55.8

Q ss_pred             hHHHHHHhhh-cCCCC-CcccHHHHHHHHHhcCCC-CCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          459 DILSQAFRFF-DKNQS-GFIEVDELKEVLLEDNAG-PNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       459 ~~~~~~F~~~-D~d~~-G~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      +.+..+|..| |.||+ |+|+..||+.+|+.++.. ..+..+++++|..+|.|+||.|+|+||+.++..
T Consensus        14 ~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~   82 (98)
T d1yuta1          14 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE   82 (98)
T ss_dssp             HHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence            4577889887 78875 999999999999886543 233567999999999999999999999999875

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=98.95  E-value=8.1e-10  Score=85.58  Aligned_cols=68  Identities=16%  Similarity=0.289  Sum_probs=58.0

Q ss_pred             hhHhHHHHhhhhc-cCCCCC-CcCHHHHHHHHHh-----cCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          384 DQMAQIKQMFYMM-DTDKNG-DLTFEELKDGLNM-----IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       384 ~~~~~~~~~F~~~-D~~~~G-~i~~~el~~~l~~-----~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      +.+..+.++|+.| |.|++| +|+.+||+.+|+.     ++...++++++++|+.+|.|+||.|+|+||+.++..
T Consensus         6 ~~i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~   80 (93)
T d3c1va1           6 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC   80 (93)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHH
Confidence            3467899999998 566655 7999999999987     356678999999999999999999999999986644

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=98.95  E-value=2.4e-10  Score=88.42  Aligned_cols=66  Identities=18%  Similarity=0.454  Sum_probs=55.7

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcC-----CCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDN-----AGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~-----~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      .+.+..+|..||.| +|+|+.+||..+|....     ... .+..++.+|+.+|.|+||.|+|+||..++...
T Consensus         8 ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~-~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l   78 (92)
T d1a4pa_           8 METMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQK-DPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGL   78 (92)
T ss_dssp             HHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSC-CTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccC-CHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHH
Confidence            35688999999987 89999999999997632     222 36679999999999999999999999998753

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=98.94  E-value=6.1e-10  Score=85.99  Aligned_cols=68  Identities=19%  Similarity=0.155  Sum_probs=58.6

Q ss_pred             hhHhHHHHhhhhc-cCCCCC-CcCHHHHHHHHHhc-----CCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          384 DQMAQIKQMFYMM-DTDKNG-DLTFEELKDGLNMI-----GQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       384 ~~~~~~~~~F~~~-D~~~~G-~i~~~el~~~l~~~-----~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      ..+..+..+|+.| |.+++| +|+++||+.+|+..     +...+..+++++++.+|.|+||.|+|+||+.++..
T Consensus         6 ~~i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~   80 (93)
T d1ksoa_           6 QAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLAC   80 (93)
T ss_dssp             HHHHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Confidence            4567899999998 999999 59999999999875     34456889999999999999999999999986544

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=6e-10  Score=88.05  Aligned_cols=64  Identities=20%  Similarity=0.348  Sum_probs=49.5

Q ss_pred             HHHHHhhhcCCCCCcccHHHHHHHHHhcCCCC---------------CCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          461 LSQAFRFFDKNQSGFIEVDELKEVLLEDNAGP---------------NGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       461 ~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~---------------~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ++.+|+.+|.||||+|+.+||..+++.++...               ..+..+..+|..+|.|+||.|+++||++.+.+
T Consensus        18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~~   96 (99)
T d1snla_          18 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQR   96 (99)
T ss_dssp             HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHC
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHhc
Confidence            67788888888888888888888886542110               01345788999999999999999999998764

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=98.93  E-value=1.3e-09  Score=84.39  Aligned_cols=67  Identities=19%  Similarity=0.449  Sum_probs=55.8

Q ss_pred             hHHHHHHhhh-cCCCCC-cccHHHHHHHHHhcC----CCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          459 DILSQAFRFF-DKNQSG-FIEVDELKEVLLEDN----AGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       459 ~~~~~~F~~~-D~d~~G-~i~~~el~~~l~~~~----~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      +.+..+|..| |.||+| +|+.+||+.+|....    .....+++++++|..+|.|+||.|+|+||+.++...
T Consensus         9 ~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l   81 (93)
T d3c1va1           9 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI   81 (93)
T ss_dssp             HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Confidence            5688999998 677654 799999999998632    233448899999999999999999999999998753

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=7.4e-10  Score=86.55  Aligned_cols=63  Identities=21%  Similarity=0.324  Sum_probs=56.7

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      ...++++|+.+|+|++|+|+.+|+..++...+.  . .+++..++..+|.|+||.|+|+||+.+|.
T Consensus         9 ~~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~l--~-~~~l~~i~~~~D~d~dG~l~~~EF~~am~   71 (95)
T d1c07a_           9 KAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGL--P-STLLAHIWSLCDTKDCGKLSKDQFALAFH   71 (95)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTC--C-HHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCCcHHHHHHHHHhcCC--C-HHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            356889999999999999999999999998664  3 78899999999999999999999988775

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=98.92  E-value=1e-09  Score=84.67  Aligned_cols=67  Identities=16%  Similarity=0.231  Sum_probs=56.9

Q ss_pred             hHHHHHHhhh-cCCCCC-cccHHHHHHHHHhcCCC----CCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          459 DILSQAFRFF-DKNQSG-FIEVDELKEVLLEDNAG----PNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       459 ~~~~~~F~~~-D~d~~G-~i~~~el~~~l~~~~~~----~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      +.+..+|..| |+||+| +|+.+||+.+|+.....    ...+.++.+++..+|.|+||.|+|+||+.++...
T Consensus         9 ~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l   81 (93)
T d1ksoa_           9 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL   81 (93)
T ss_dssp             HHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence            4577889887 999999 59999999999875432    2348899999999999999999999999998753

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=98.90  E-value=5.4e-10  Score=85.53  Aligned_cols=68  Identities=24%  Similarity=0.374  Sum_probs=59.7

Q ss_pred             hhHhHHHHhhhhc-cCCCCC-CcCHHHHHHHHHh---cCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          384 DQMAQIKQMFYMM-DTDKNG-DLTFEELKDGLNM---IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       384 ~~~~~~~~~F~~~-D~~~~G-~i~~~el~~~l~~---~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      ..+..+..+|+.| |++++| +|+..||+.+++.   ++...++++++.+++.+|.|+||.|+|+||+.++..
T Consensus         6 ~ai~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~   78 (89)
T d1k8ua_           6 QAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGA   78 (89)
T ss_dssp             HHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence            4567899999998 999999 6999999999987   466678889999999999999999999999986543

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.89  E-value=1.9e-09  Score=83.66  Aligned_cols=62  Identities=23%  Similarity=0.388  Sum_probs=56.1

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      ..++++|+.+|+|++|+|+.+|+..++...+.  . ..++..++..+|.|+||.|+|+||+.++.
T Consensus         9 ~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~l--~-~~~l~~i~~~~D~d~dG~l~~~EF~~a~~   70 (92)
T d1fi6a_           9 QYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKL--P-ILELSHIWELSDFDKDGALTLDEFCAAFH   70 (92)
T ss_dssp             HHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSS--C-HHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCcccchhHHHHHHHHHHccC--C-HHHHHHHHHHhCCCCCCeecHHHHHHHHH
Confidence            45889999999999999999999999998764  3 78899999999999999999999987665

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=98.87  E-value=9.7e-10  Score=84.08  Aligned_cols=66  Identities=20%  Similarity=0.412  Sum_probs=56.3

Q ss_pred             hHHHHHHhhh-cCCCCC-cccHHHHHHHHHh---cCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          459 DILSQAFRFF-DKNQSG-FIEVDELKEVLLE---DNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       459 ~~~~~~F~~~-D~d~~G-~i~~~el~~~l~~---~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      ..+..+|..| |+||+| +|+..||+.++..   .+.... ++++.++++.+|.|+||.|+|+||+.++...
T Consensus         9 ~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~-~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~l   79 (89)
T d1k8ua_           9 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQ-DAEIARLMEDLDRNKDQEVNFQEYVTFLGAL   79 (89)
T ss_dssp             HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTT-SHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCC-HHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence            4577889888 999999 6999999999986   444444 6789999999999999999999999998753

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=5.9e-10  Score=89.44  Aligned_cols=69  Identities=19%  Similarity=0.238  Sum_probs=61.9

Q ss_pred             CCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhh
Q 043828          380 NLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSV  450 (586)
Q Consensus       380 ~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  450 (586)
                      .+..++.+.++++|..+|.|++|+|+.+|++.+|.+.|  ++.+++.++|+.+|.|++|.|+++||+.++.
T Consensus        15 ~lt~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~--L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~   83 (110)
T d1iq3a_          15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSDADCDGALTLPEFCAAFH   83 (110)
T ss_dssp             CCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHhhc--cchHHHHHHHHHhccCCCCeECHHHHHHHHH
Confidence            45678889999999999999999999999999998866  5677899999999999999999999987553

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=98.83  E-value=9.9e-10  Score=83.78  Aligned_cols=68  Identities=15%  Similarity=0.257  Sum_probs=58.4

Q ss_pred             hhHhHHHHhhhhc-cCCCCCC-cCHHHHHHHHHh-cCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          384 DQMAQIKQMFYMM-DTDKNGD-LTFEELKDGLNM-IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       384 ~~~~~~~~~F~~~-D~~~~G~-i~~~el~~~l~~-~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      ..+..+..+|+.| |.|++|. ++.+||+.++.. ++...+..+++.+++.+|.|+||.|+|+||+.++..
T Consensus         7 ~ai~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~   77 (87)
T d1xk4a1           7 KALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIK   77 (87)
T ss_dssp             HHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            4457889999998 8899986 589999999975 676677778999999999999999999999987644

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=98.82  E-value=7.8e-10  Score=84.35  Aligned_cols=65  Identities=15%  Similarity=0.280  Sum_probs=53.8

Q ss_pred             hHHHHHHhhh-cCCCCCcc-cHHHHHHHHHh-cCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          459 DILSQAFRFF-DKNQSGFI-EVDELKEVLLE-DNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       459 ~~~~~~F~~~-D~d~~G~i-~~~el~~~l~~-~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      +.+..+|..| |+||+|.+ +.+||+.+|.. ++.... +.+++++++.+|.|+||.|+|+||+.++.+
T Consensus        10 ~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~-~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~   77 (87)
T d1xk4a1          10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIR-KKGADVWFKELDINTDGAVNFQEFLILVIK   77 (87)
T ss_dssp             HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHH-TTCHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccc-hHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            3577788887 99999865 89999999976 343333 567999999999999999999999999875

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=98.81  E-value=8.5e-10  Score=86.94  Aligned_cols=68  Identities=10%  Similarity=0.129  Sum_probs=57.3

Q ss_pred             hhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCC-------CCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          383 QDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQK-------VSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       383 ~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~-------~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      +..+..+..+|+.|| +++|.|+..||+.+|+..+..       .+...++.+|+.+|.|+||.|+|+||+.++..
T Consensus         6 E~~i~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~   80 (100)
T d1psra_           6 ERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD   80 (100)
T ss_dssp             HHHHHHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence            455778889999997 789999999999999986532       34567899999999999999999999986654

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1.5e-09  Score=85.67  Aligned_cols=62  Identities=23%  Similarity=0.307  Sum_probs=41.3

Q ss_pred             HHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCC----------------CHHHHHHHHHHhcCCCCCcccHhHHHhhh
Q 043828          388 QIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKV----------------SDPDVKMLMEAADVDGNGLLSCDEFVTMS  449 (586)
Q Consensus       388 ~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~----------------~~~~~~~~~~~~D~d~dg~i~~~eF~~~~  449 (586)
                      .++.+|..+|.|+||+|+.+||..++..++...                ....++.+|+.+|.|+||.|+++||+.++
T Consensus        17 ~~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~   94 (99)
T d1snla_          17 NPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLAST   94 (99)
T ss_dssp             CHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHH
T ss_pred             CHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHH
Confidence            367899999999999999999999987642111                11224555555555555555555555543

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=98.79  E-value=6.7e-09  Score=78.68  Aligned_cols=68  Identities=15%  Similarity=0.217  Sum_probs=55.8

Q ss_pred             hhHhHHHHhhhhcc-CCCCC-CcCHHHHHHHHHhc-----CCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          384 DQMAQIKQMFYMMD-TDKNG-DLTFEELKDGLNMI-----GQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       384 ~~~~~~~~~F~~~D-~~~~G-~i~~~el~~~l~~~-----~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      ..+..+..+|+.|+ .++++ +|+.+||+.+|+..     +...+++.++.+|+.+|.|+||.|+|+||+.++..
T Consensus         5 ~ai~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~   79 (87)
T d1e8aa_           5 EHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI   79 (87)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence            45678999999985 45554 69999999999874     33456788999999999999999999999986543

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=98.79  E-value=1.5e-09  Score=64.48  Aligned_cols=33  Identities=33%  Similarity=0.684  Sum_probs=30.2

Q ss_pred             chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcC
Q 043828          457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDN  489 (586)
Q Consensus       457 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~  489 (586)
                      +++++++||+.||+||+|+|+..||+.+|+.+|
T Consensus         1 seeel~eAF~~FDkDg~G~Is~~EL~~vm~~lG   33 (33)
T d2hf5a1           1 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLG   33 (33)
T ss_dssp             CHHHHHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred             CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence            357899999999999999999999999998775

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=98.78  E-value=1.2e-09  Score=64.90  Aligned_cols=31  Identities=13%  Similarity=0.122  Sum_probs=29.0

Q ss_pred             hHHHHHHHhhhhhccCcccHHHHHHHHHhhc
Q 043828          526 ADWKMASRQYSRAMMSALSIKLFKDKSMELT  556 (586)
Q Consensus       526 ~~~~~~F~~~D~d~~G~i~~~el~~~~~~~g  556 (586)
                      +++++||+.||+|++|+|+.+||+++|..+|
T Consensus         3 eel~eAF~~FDkDg~G~Is~~EL~~vm~~lG   33 (33)
T d2hf5a1           3 EEIREAFRVFDKDGNGYISAAELRHVMTNLG   33 (33)
T ss_dssp             HHHHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence            5789999999999999999999999998876

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=98.74  E-value=1.7e-08  Score=76.33  Aligned_cols=66  Identities=20%  Similarity=0.386  Sum_probs=54.0

Q ss_pred             hHHHHHHhhh-cCCCCC-cccHHHHHHHHHhcCC----CCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          459 DILSQAFRFF-DKNQSG-FIEVDELKEVLLEDNA----GPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       459 ~~~~~~F~~~-D~d~~G-~i~~~el~~~l~~~~~----~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      ..+..+|..| +++|++ +|+.+||+.+|+....    ...++..++++|..+|.|+||.|+|+||+.++..
T Consensus         8 ~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~   79 (87)
T d1e8aa_           8 EGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI   79 (87)
T ss_dssp             HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH
Confidence            3577889888 556664 6999999999987432    2334788999999999999999999999999874

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=1.1e-08  Score=79.47  Aligned_cols=61  Identities=25%  Similarity=0.388  Sum_probs=54.9

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      ..++++|+.+| +++|+|+.+|+..+|...|.  . ..+++.++..+|.|+||.|+++||+.++.
T Consensus        10 ~~y~~~F~~~D-~~~G~i~~~el~~~l~~~gl--~-~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~   70 (95)
T d2jxca1          10 AKYDAIFDSLS-PVNGFLSGDKVKPVLLNSKL--P-VDILGRVWELSDIDHDGMLDRDEFAVAMF   70 (95)
T ss_dssp             HHHHHHHHHTC-CBTTEEEHHHHHHHHTTSSC--C-HHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHhC-CCCCceeHHHHHHHHHHcCC--C-HHHHHHHHHHhcCCCCCeEcHHHHHHHHH
Confidence            46889999999 89999999999999988764  3 78899999999999999999999987765

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.73  E-value=6.8e-09  Score=81.46  Aligned_cols=62  Identities=21%  Similarity=0.302  Sum_probs=56.4

Q ss_pred             hHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhh
Q 043828          387 AQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSV  450 (586)
Q Consensus       387 ~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  450 (586)
                      ..++++|+.+|.|++|+|+.+|++.++...|  ++.+++..+|+.+|.|++|.|+++||..++.
T Consensus        11 ~~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~--L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~   72 (99)
T d1qjta_          11 PVYEKYYRQVEAGNTGRVLALDAAAFLKKSG--LPDLILGKIWDLADTDGKGVLSKQEFFVALR   72 (99)
T ss_dssp             THHHHHHHHHCCTTSSCCCSHHHHHHHHTSS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcccHHHHHHHHHHcC--CcHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Confidence            4577899999999999999999999999866  6799999999999999999999999987653

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.65  E-value=1.8e-08  Score=78.93  Aligned_cols=62  Identities=18%  Similarity=0.248  Sum_probs=56.0

Q ss_pred             hHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          459 DILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       459 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      ..++++|+.+|+|++|+|+.+|+..++...|.  + .+++..++..+|.|+||.|+++||..+|.
T Consensus        11 ~~y~~~F~~~D~d~~G~i~~~e~~~~l~~s~L--~-~~~L~~i~~~~D~d~dG~L~~~EF~~am~   72 (99)
T d1qjta_          11 PVYEKYYRQVEAGNTGRVLALDAAAFLKKSGL--P-DLILGKIWDLADTDGKGVLSKQEFFVALR   72 (99)
T ss_dssp             THHHHHHHHHCCTTSSCCCSHHHHHHHHTSSS--C-HHHHHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcccHHHHHHHHHHcCC--c-HHHHHHHHHHHcCCCCCccCHHHHHHHHH
Confidence            45778999999999999999999999997664  3 88899999999999999999999998776

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=98.63  E-value=4e-09  Score=82.95  Aligned_cols=65  Identities=18%  Similarity=0.347  Sum_probs=51.8

Q ss_pred             HHHHHHhhhcCCCCCcccHHHHHHHHHhcCCC------CCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          460 ILSQAFRFFDKNQSGFIEVDELKEVLLEDNAG------PNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       460 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~------~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      .+..+|..|| +++|.|+..||+.+|+..+..      ...+..++.+|..+|.|+||.|+|+||+.++...
T Consensus        11 ~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l   81 (100)
T d1psra_          11 GMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDI   81 (100)
T ss_dssp             HHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence            3556666665 789999999999999875432      1124568999999999999999999999998753

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=1e-08  Score=82.07  Aligned_cols=64  Identities=22%  Similarity=0.300  Sum_probs=56.4

Q ss_pred             chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       457 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      ..+.++++|+.+|+|++|+|+.+|++.+|...|..   ..++..+++.+|.|+||.|+++||+.+|.
T Consensus        20 e~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~L~---~~~L~~Iw~l~D~d~dG~l~~~EF~~am~   83 (110)
T d1iq3a_          20 QREYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLS---IPELSYIWELSDADCDGALTLPEFCAAFH   83 (110)
T ss_dssp             SHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCS---SCCHHHHHHHHCSSSCSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCcccchhHHHHHHHHHhhccc---hHHHHHHHHHhccCCCCeECHHHHHHHHH
Confidence            45678899999999999999999999999876654   45689999999999999999999988775

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.54  E-value=1.7e-07  Score=88.15  Aligned_cols=89  Identities=17%  Similarity=0.085  Sum_probs=65.6

Q ss_pred             cccCeeecceeccCCceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           79 ILDKYTFGKELGRGEFGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        79 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ..+.|++.+..+.++.+.||++.  ..+..+++|+.........   ..+.+|...++.|..+--+++++.+..+++..|
T Consensus        12 ~~~~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~~~---~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~   86 (263)
T d1j7la_          12 LIEKYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKGTT---YDVEREKDMMLWLEGKLPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             HHTTSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTTST---TCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEE
T ss_pred             hhhceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCcccch---hhHHHHHHHHHHHhccCCCCcEEEEEecCCceE
Confidence            34577877766656667899874  4667788898865543322   356788988888866655788888888899999


Q ss_pred             EEEeccCCCChHHH
Q 043828          159 LVMELCEGGELFDR  172 (586)
Q Consensus       159 iv~E~~~gg~L~~~  172 (586)
                      +||++++|.++.+.
T Consensus        87 lv~~~l~G~~~~~~  100 (263)
T d1j7la_          87 LLMSEADGVLCSEE  100 (263)
T ss_dssp             EEEECCSSEEHHHH
T ss_pred             EEEEeccccccccc
Confidence            99999999877543

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=98.48  E-value=2.3e-07  Score=70.25  Aligned_cols=66  Identities=23%  Similarity=0.348  Sum_probs=53.6

Q ss_pred             hHhHHHHhhhhcc-CCCC-CCcCHHHHHHHHHh-----cCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhh
Q 043828          385 QMAQIKQMFYMMD-TDKN-GDLTFEELKDGLNM-----IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSV  450 (586)
Q Consensus       385 ~~~~~~~~F~~~D-~~~~-G~i~~~el~~~l~~-----~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  450 (586)
                      .+..+..+|+.|. .+++ ++|++.||+.+|+.     +.....+..++++|+.+|.|+||.|+|+||+.+..
T Consensus         7 ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~   79 (90)
T d3cr5x1           7 AVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVA   79 (90)
T ss_dssp             HHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHH
Confidence            4567899999985 4554 58999999999986     23334567799999999999999999999987554

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.39  E-value=1.4e-07  Score=53.10  Aligned_cols=33  Identities=42%  Similarity=0.839  Sum_probs=29.0

Q ss_pred             chhHHHHHHhhhcCCCCCcccHHHHHHHHHhcC
Q 043828          457 NDDILSQAFRFFDKNQSGFIEVDELKEVLLEDN  489 (586)
Q Consensus       457 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~  489 (586)
                      .++++.++|+.||+|+||+|+.+||..+++..|
T Consensus         2 sEeELae~FRifDkNaDGyiD~eEl~~ilr~tG   34 (34)
T d1ctda_           2 SEEELANAFRIFDKNADGYIDIEELGEILRATG   34 (34)
T ss_dssp             HHHHHHHHHHTTCCSSSSCBCHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHccCCcccccHHHHHHHHHhcC
Confidence            467899999999999999999999999987643

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=98.35  E-value=3.2e-07  Score=70.05  Aligned_cols=67  Identities=18%  Similarity=0.235  Sum_probs=54.2

Q ss_pred             hHhHHHHhhhhccC-CCC-CCcCHHHHHHHHHh-----cCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhh
Q 043828          385 QMAQIKQMFYMMDT-DKN-GDLTFEELKDGLNM-----IGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVH  451 (586)
Q Consensus       385 ~~~~~~~~F~~~D~-~~~-G~i~~~el~~~l~~-----~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  451 (586)
                      .+..+..+|+.|.. +++ ++|+..||+.+|+.     ++..-....++++|+.+|.|+||.|+|+||+.+...
T Consensus         7 ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~   80 (95)
T d1qlsa_           7 CIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGG   80 (95)
T ss_dssp             HHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence            45678899998754 454 58999999999976     344456678999999999999999999999876543

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=98.35  E-value=1.1e-06  Score=66.47  Aligned_cols=66  Identities=21%  Similarity=0.388  Sum_probs=53.3

Q ss_pred             HHHHHHhhh-cCCCC-CcccHHHHHHHHHhc----CCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          460 ILSQAFRFF-DKNQS-GFIEVDELKEVLLED----NAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       460 ~~~~~F~~~-D~d~~-G~i~~~el~~~l~~~----~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      .+-.+|..| .++|+ ++|+..||+.+|..-    ......+..++++|..+|.|+||.|+|+||+.++...
T Consensus        10 ~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~l   81 (90)
T d3cr5x1          10 ALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMI   81 (90)
T ss_dssp             HHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            467789888 45665 579999999999862    2233347789999999999999999999999988754

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=98.21  E-value=9.5e-07  Score=67.26  Aligned_cols=66  Identities=21%  Similarity=0.303  Sum_probs=50.3

Q ss_pred             hHhHHHHhhhhccC-CCC-CCcCHHHHHHHHHh-c----CCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhh
Q 043828          385 QMAQIKQMFYMMDT-DKN-GDLTFEELKDGLNM-I----GQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSV  450 (586)
Q Consensus       385 ~~~~~~~~F~~~D~-~~~-G~i~~~el~~~l~~-~----~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  450 (586)
                      -+..+..+|+.|.. +++ +++++.||+.+++. +    .....+..++.+|+.+|.|+||.|+|+||+.+..
T Consensus         7 ai~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~   79 (94)
T d1j55a_           7 AMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVA   79 (94)
T ss_dssp             HHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHH
Confidence            45678899999854 443 58999999999986 2    2233456799999999999999999999988653

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=98.17  E-value=1.3e-06  Score=66.60  Aligned_cols=65  Identities=18%  Similarity=0.336  Sum_probs=51.7

Q ss_pred             HHHHHHhhhc-CCCC-CcccHHHHHHHHHh-----cCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          460 ILSQAFRFFD-KNQS-GFIEVDELKEVLLE-----DNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       460 ~~~~~F~~~D-~d~~-G~i~~~el~~~l~~-----~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      .+-.+|..|. ++|+ ++++..||+.+|..     ++.. ..+..++++|..+|.|+||.|+|+||+.++...
T Consensus        10 ~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~-~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~l   81 (95)
T d1qlsa_          10 SLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQ-KDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL   81 (95)
T ss_dssp             HHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHC-CCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence            4667888774 5665 67999999999875     3322 236779999999999999999999999998754

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.07  E-value=3.9e-06  Score=83.41  Aligned_cols=82  Identities=17%  Similarity=0.171  Sum_probs=52.6

Q ss_pred             cceeccCCceEEEEEEEccCCcEEEEEEeecccc-C---ChhcHHHHHHHHHHHHhCCCC--CCeeEEEEEEEeCCeEEE
Q 043828           86 GKELGRGEFGITHQCFEIETGETYACKKIAKEKL-K---TEIDIDDVRREVEIMRHLPKH--PNIVTYKEAYEDKDAIYL  159 (586)
Q Consensus        86 ~~~lG~G~~g~V~~~~~~~~~~~~avK~i~~~~~-~---~~~~~~~~~~Ei~~l~~l~~h--pnIv~l~~~~~~~~~~~i  159 (586)
                      .+.||.|....||++....+++.+++|.-..... .   .....++...|...|+.+..+  ..+++++.+  ++...++
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l  108 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  108 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence            3468999999999998777788999997543211 0   122345667788888876444  345666644  4556679


Q ss_pred             EEeccCCCCh
Q 043828          160 VMELCEGGEL  169 (586)
Q Consensus       160 v~E~~~gg~L  169 (586)
                      |||++.+..+
T Consensus       109 vmE~L~~~~~  118 (392)
T d2pula1         109 VMEDLSHLKI  118 (392)
T ss_dssp             EECCCTTSEE
T ss_pred             EEeccCCccc
Confidence            9999987554

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=98.03  E-value=6.6e-06  Score=60.81  Aligned_cols=65  Identities=18%  Similarity=0.266  Sum_probs=51.0

Q ss_pred             hHhHHHHhhhhccC-CC-CCCcCHHHHHHHHHh-cCCC-----CCHHHHHHHHHHhcCCCCCcccHhHHHhhh
Q 043828          385 QMAQIKQMFYMMDT-DK-NGDLTFEELKDGLNM-IGQK-----VSDPDVKMLMEAADVDGNGLLSCDEFVTMS  449 (586)
Q Consensus       385 ~~~~~~~~F~~~D~-~~-~G~i~~~el~~~l~~-~~~~-----~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~  449 (586)
                      -+..+..+|+.|.. ++ .++++..||+.+++. ++.-     -.+..++.+|+.+|.|+||.|+|+||+.+.
T Consensus         8 ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li   80 (83)
T d1xk4c1           8 NIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLM   80 (83)
T ss_dssp             HHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHH
Confidence            35678899999864 23 369999999999986 3221     133458999999999999999999998754

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=98.03  E-value=4.6e-06  Score=63.36  Aligned_cols=66  Identities=18%  Similarity=0.395  Sum_probs=50.0

Q ss_pred             HHHHHHhhhc-CCCC-CcccHHHHHHHHHhcCC----CCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhcc
Q 043828          460 ILSQAFRFFD-KNQS-GFIEVDELKEVLLEDNA----GPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTSG  525 (586)
Q Consensus       460 ~~~~~F~~~D-~d~~-G~i~~~el~~~l~~~~~----~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  525 (586)
                      .+-.+|..|. ++|+ ++++..||+.+|..--.    .+.++..++.+|..+|.|+||.|+|+||+.++...
T Consensus        10 ~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~l   81 (94)
T d1j55a_          10 MIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI   81 (94)
T ss_dssp             HHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            4677888874 4554 58999999999976211    12235679999999999999999999999998753

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.93  E-value=4.5e-06  Score=46.88  Aligned_cols=31  Identities=26%  Similarity=0.514  Sum_probs=27.2

Q ss_pred             hHHHHhhhhccCCCCCCcCHHHHHHHHHhcC
Q 043828          387 AQIKQMFYMMDTDKNGDLTFEELKDGLNMIG  417 (586)
Q Consensus       387 ~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~  417 (586)
                      +++.+.|+.||.|.||+|+.+||..+++..|
T Consensus         4 eELae~FRifDkNaDGyiD~eEl~~ilr~tG   34 (34)
T d1ctda_           4 EELANAFRIFDKNADGYIDIEELGEILRATG   34 (34)
T ss_dssp             HHHHHHHHTTCCSSSSCBCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHccCCcccccHHHHHHHHHhcC
Confidence            5788999999999999999999999987643

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=97.92  E-value=1.1e-05  Score=59.49  Aligned_cols=64  Identities=27%  Similarity=0.485  Sum_probs=50.0

Q ss_pred             HHHHHHhhhc-CCCC-CcccHHHHHHHHHhcCCC----C-CCHHHHHHHHHHhcCCCCCceeHHHHHHHHh
Q 043828          460 ILSQAFRFFD-KNQS-GFIEVDELKEVLLEDNAG----P-NGDQTIRDILRDVDLDRDGRISFEEFKAMMT  523 (586)
Q Consensus       460 ~~~~~F~~~D-~d~~-G~i~~~el~~~l~~~~~~----~-~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  523 (586)
                      .+-.+|..|. ++|+ +.++..||+.+|..--..    . ..+..++.+|..+|.|+||.|+|+||+.++.
T Consensus        11 ~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~   81 (83)
T d1xk4c1          11 TIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMA   81 (83)
T ss_dssp             HHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHh
Confidence            4667888885 3443 789999999999862211    1 2356789999999999999999999999875

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.78  E-value=4.9e-05  Score=70.22  Aligned_cols=75  Identities=11%  Similarity=0.094  Sum_probs=51.1

Q ss_pred             eeccCCc-eEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCC-CCeeEEEEEEEeCCeEEEEEeccC
Q 043828           88 ELGRGEF-GITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH-PNIVTYKEAYEDKDAIYLVMELCE  165 (586)
Q Consensus        88 ~lG~G~~-g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~h-pnIv~l~~~~~~~~~~~iv~E~~~  165 (586)
                      .+..|.. +.||++. ...+..+++|.......      ..+..|...++.|..+ -.+++++.+..+++..++||++++
T Consensus        17 ~~~~G~s~~~v~r~~-~~~~~~~vlK~~~~~~~------~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~   89 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLS-AQGRPVLFVKTDLSGAL------NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP   89 (255)
T ss_dssp             ECSCTTSSCEEEEEE-CTTSCCEEEEEECSCTT------SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS
T ss_pred             EcCCcccCCeEEEEE-eCCCCEEEEEeCCccCH------hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeee
Confidence            3444554 5789885 34566788887644321      2466777777766333 236778888888889999999998


Q ss_pred             CCCh
Q 043828          166 GGEL  169 (586)
Q Consensus       166 gg~L  169 (586)
                      |.++
T Consensus        90 G~~~   93 (255)
T d1nd4a_          90 GQDL   93 (255)
T ss_dssp             SEET
T ss_pred             cccc
Confidence            8665

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=1.8e-05  Score=63.26  Aligned_cols=86  Identities=7%  Similarity=0.138  Sum_probs=54.0

Q ss_pred             CCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhc------CCCCCcccHhHHHhhhhhhccCC--chhHHHHHHhhhcC
Q 043828          399 DKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAAD------VDGNGLLSCDEFVTMSVHLKRIG--NDDILSQAFRFFDK  470 (586)
Q Consensus       399 ~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D------~d~dg~i~~~eF~~~~~~~~~~~--~~~~~~~~F~~~D~  470 (586)
                      +..+.|+.++|.++.+..  +++..+|+.+++.|-      ...+|.|++++|..++...-...  ...-.+.+|+.||+
T Consensus         3 ~~~s~l~p~~l~~L~~~T--~fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~   80 (118)
T d1tuza_           3 KERGLISPSDFAQLQKYM--EYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFET   80 (118)
T ss_dssp             CCCSCSCHHHHHHHHHHH--HHCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCC
T ss_pred             cccCCCCHHHHHHHHHHc--CCCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHcc
Confidence            356678888888877654  356667777777762      13567788888877654433222  24456777888877


Q ss_pred             CCC--------CcccHHHHHHHHH
Q 043828          471 NQS--------GFIEVDELKEVLL  486 (586)
Q Consensus       471 d~~--------G~i~~~el~~~l~  486 (586)
                      |++        |.|+..||..+|.
T Consensus        81 ~~d~~~~~~~~g~I~f~efv~~LS  104 (118)
T d1tuza_          81 GHCLNETNVTKDVVCLNDVSCYFS  104 (118)
T ss_dssp             CCCTTCCCCCSCCEEHHHHHHHHH
T ss_pred             ccccccccCCCceeeHHHHHHHHH
Confidence            765        4555555555544

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=2.1e-05  Score=62.88  Aligned_cols=73  Identities=8%  Similarity=0.117  Sum_probs=58.2

Q ss_pred             CchhhHhHHHHhhhhcc---CCCCCCcCHHHHHHHHHhcCCC--CCHHHHHHHHHHhcCCCC--------CcccHhHHHh
Q 043828          381 LPQDQMAQIKQMFYMMD---TDKNGDLTFEELKDGLNMIGQK--VSDPDVKMLMEAADVDGN--------GLLSCDEFVT  447 (586)
Q Consensus       381 l~~~~~~~~~~~F~~~D---~~~~G~i~~~el~~~l~~~~~~--~~~~~~~~~~~~~D~d~d--------g~i~~~eF~~  447 (586)
                      ++..+++.+++.|+...   ...+|.|+.++|+.++..+...  .+..-++++|..||.|+|        |.|+|.||+.
T Consensus        22 fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~~d~~~~~~~~g~I~f~efv~  101 (118)
T d1tuza_          22 YSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDVSC  101 (118)
T ss_dssp             HCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHHHH
T ss_pred             CCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHccccccccccCCCceeeHHHHHH
Confidence            56778889999997653   2578999999999999876432  346678999999999976        8999999998


Q ss_pred             hhhhhc
Q 043828          448 MSVHLK  453 (586)
Q Consensus       448 ~~~~~~  453 (586)
                      .+.-+.
T Consensus       102 ~LS~l~  107 (118)
T d1tuza_         102 YFSLLE  107 (118)
T ss_dssp             HHHHHH
T ss_pred             HHHHHc
Confidence            665443

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.77  E-value=0.0014  Score=64.49  Aligned_cols=75  Identities=12%  Similarity=0.007  Sum_probs=51.3

Q ss_pred             cceeccCCceEEEEEEEcc-------CCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCCCCeeEEEEEEEeCCeEE
Q 043828           86 GKELGRGEFGITHQCFEIE-------TGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKHPNIVTYKEAYEDKDAIY  158 (586)
Q Consensus        86 ~~~lG~G~~g~V~~~~~~~-------~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~hpnIv~l~~~~~~~~~~~  158 (586)
                      ++.|+.|-.-.+|++....       .+..|++++....  ..   .....+|..+++.+..+.-.+++++++.+    +
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~--~~---~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g  117 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ET---ESHLVAESVIFTLLSERHLGPKLYGIFSG----G  117 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc--ch---hhHHHHHHHHHHHHHhCCCCCeEEEEcCC----c
Confidence            3578888889999987542       2355666665421  11   23456899999988666556688877643    6


Q ss_pred             EEEeccCCCCh
Q 043828          159 LVMELCEGGEL  169 (586)
Q Consensus       159 iv~E~~~gg~L  169 (586)
                      +|+||++|.+|
T Consensus       118 ~I~efi~g~~l  128 (395)
T d1nw1a_         118 RLEEYIPSRPL  128 (395)
T ss_dssp             EEECCCCEEEC
T ss_pred             eEEEEeccccC
Confidence            89999988554

>d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Osteonectin
domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=0.00023  Score=58.28  Aligned_cols=58  Identities=19%  Similarity=0.198  Sum_probs=39.5

Q ss_pred             HhhhhccCC-CCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhh
Q 043828          391 QMFYMMDTD-KNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSV  450 (586)
Q Consensus       391 ~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  450 (586)
                      =.|..+|.| .||.|+..||+.+...+  .+.+.-+..+++..|.|+||.|++.|+..++.
T Consensus        81 W~F~~LD~n~~D~~L~~~EL~~l~~~L--~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~  139 (151)
T d1sraa_          81 WQFGQLDQHPIDGYLSHTELAPLRAPL--IPMEHCTTRFFETCDLDNDKYIALDEWAGCFG  139 (151)
T ss_dssp             HHHHHHCCTTCSSEECTTTTGGGGSTT--STTGGGHHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred             eehhhcCCCCCCCccCHHHHHHHHHhh--cCCchHHHHHHHHhcCCCCCcCCHHHHHHHcC
Confidence            347777887 47788887777654332  33445577777777888888888777777653

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=96.69  E-value=0.0013  Score=62.80  Aligned_cols=70  Identities=16%  Similarity=0.213  Sum_probs=45.1

Q ss_pred             ceEEEEEEEccCCcEEEEEEeeccccCChhcHHHHHHHHHHHHhCCCC--C--CeeEE--EEEEEeCCeEEEEEeccCCC
Q 043828           94 FGITHQCFEIETGETYACKKIAKEKLKTEIDIDDVRREVEIMRHLPKH--P--NIVTY--KEAYEDKDAIYLVMELCEGG  167 (586)
Q Consensus        94 ~g~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~Ei~~l~~l~~h--p--nIv~l--~~~~~~~~~~~iv~E~~~gg  167 (586)
                      --.||++.. .+|..|++|+.+....    ..+++..|...+..|..+  |  ..+..  -..+...+..+.++++++|.
T Consensus        35 EN~vy~v~~-~dg~~~VlK~~rp~~~----s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~  109 (325)
T d1zyla1          35 ENRVYQFQD-EDRRRFVVKFYRPERW----TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGR  109 (325)
T ss_dssp             SSEEEEECC-TTCCCEEEEEECTTTS----CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCE
T ss_pred             cceeEEEEc-CCCCEEEEEEeCCCCC----CHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCc
Confidence            357999853 6788899999865432    246778888888877322  1  11111  11234567889999999774


Q ss_pred             C
Q 043828          168 E  168 (586)
Q Consensus       168 ~  168 (586)
                      .
T Consensus       110 ~  110 (325)
T d1zyla1         110 Q  110 (325)
T ss_dssp             E
T ss_pred             C
Confidence            3

>d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Osteonectin
domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.00033  Score=57.30  Aligned_cols=61  Identities=20%  Similarity=0.331  Sum_probs=45.8

Q ss_pred             HHHHHhhhcCC-CCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCCCCceeHHHHHHHHhc
Q 043828          461 LSQAFRFFDKN-QSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDLDRDGRISFEEFKAMMTS  524 (586)
Q Consensus       461 ~~~~F~~~D~d-~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  524 (586)
                      +.-.|..+|.| +||.|+..||..+.+.+  .+. +.=+..++...|.|+||.|++.|+...+.-
T Consensus        79 v~W~F~~LD~n~~D~~L~~~EL~~l~~~L--~~~-e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~v  140 (151)
T d1sraa_          79 VHWQFGQLDQHPIDGYLSHTELAPLRAPL--IPM-EHCTTRFFETCDLDNDKYIALDEWAGCFGI  140 (151)
T ss_dssp             HHHHHHHHCCTTCSSEECTTTTGGGGSTT--STT-GGGHHHHHHHHCTTCSSSEEHHHHHHHTTC
T ss_pred             ceeehhhcCCCCCCCccCHHHHHHHHHhh--cCC-chHHHHHHHHhcCCCCCcCCHHHHHHHcCC
Confidence            44458889998 48999999988754322  222 445778888899999999999999888764

>d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.04  E-value=0.03  Score=41.94  Aligned_cols=69  Identities=12%  Similarity=0.174  Sum_probs=53.3

Q ss_pred             CchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCC-CCCHHHHHHHHHHhcCCC----CCceeHHHHHHHHhcc
Q 043828          456 GNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAG-PNGDQTIRDILRDVDLDR----DGRISFEEFKAMMTSG  525 (586)
Q Consensus       456 ~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~-~~~~~~~~~~~~~~d~~~----dg~i~~~eF~~~~~~~  525 (586)
                      ....++..+|..+-. +.+.+|.++|..+|+..... ..+++.+..+|..+..+.    .|.+++++|..+|...
T Consensus         5 ~~R~ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S~   78 (94)
T d1qasa1           5 TQRAEIDRAFEEAAG-SAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSA   78 (94)
T ss_dssp             SCCHHHHHHHHHHHT-TSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHSS
T ss_pred             CccHHHHHHHHHHhC-CCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcCc
Confidence            445678999998854 45789999999999875433 335778899999987663    3679999999988754

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.71  E-value=0.045  Score=51.14  Aligned_cols=31  Identities=32%  Similarity=0.468  Sum_probs=25.3

Q ss_pred             cCceeccCCCCceEeecCCCCCceEEeecccccc
Q 043828          201 NGVMHRDLKPENFLFADGSENSQLKAIDFGLSIF  234 (586)
Q Consensus       201 ~~ivHrDlkp~Nill~~~~~~~~vkl~Dfg~a~~  234 (586)
                      .|+||+|+.++||+++   .+..+-|+||+.+..
T Consensus       183 ~giIHgDl~~dNvl~~---~~~v~gvIDF~~~~~  213 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFL---GDELSGLIDFYFACN  213 (316)
T ss_dssp             EEEECSCCCGGGEEEE---TTEEEEECCCTTCEE
T ss_pred             cccccCCcchhhhhcc---cccceeEeccccccc
Confidence            4799999999999994   445568999998753

>d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=94.21  E-value=0.23  Score=32.66  Aligned_cols=74  Identities=16%  Similarity=0.310  Sum_probs=60.4

Q ss_pred             cCCchhhHhHHHHhhhhccCCCCCCcCHHHHHHHHHhcCCCCCHHHHHHHHHHhc-CCCC-CcccHhHHHhhhhhh
Q 043828          379 DNLPQDQMAQIKQMFYMMDTDKNGDLTFEELKDGLNMIGQKVSDPDVKMLMEAAD-VDGN-GLLSCDEFVTMSVHL  452 (586)
Q Consensus       379 ~~l~~~~~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D-~d~d-g~i~~~eF~~~~~~~  452 (586)
                      ..+.+++..+-.++|..||.|....-...+-...|.++|...+..+.+.+++..- ..+| ..|.-+|++.++..+
T Consensus         6 ralgpeekdecmkifdifdrnaeniapvsdtmdmltklgqtytkreteaimkeargpkgdkknigpeewltlcskw   81 (86)
T d1j7qa_           6 RALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCSKW   81 (86)
T ss_dssp             CCCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHHHHH
T ss_pred             cccCchhHHHHHHHHHHHhccccccCCcchHHHHHHHhhhHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHHHHH
Confidence            3466788888899999999999988889999999999999999999999999763 3333 357788888766543

>d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: alpha-Actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.91  E-value=0.17  Score=34.99  Aligned_cols=61  Identities=13%  Similarity=0.319  Sum_probs=47.6

Q ss_pred             CCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhcC----C-CCCceeHHHHHHHHhc
Q 043828          455 IGNDDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVDL----D-RDGRISFEEFKAMMTS  524 (586)
Q Consensus       455 ~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~----~-~dg~i~~~eF~~~~~~  524 (586)
                      ..+.+++.++|+.+ .++..+||.+||++.|.        .++++-++..+-.    + ..|..+|..|...+-.
T Consensus         4 ~~TaEqv~~aFr~l-A~~KpyVT~~dL~~~L~--------peqaeyc~~~M~~y~~~~~~~~ayDY~sF~~~l~g   69 (73)
T d1h8ba_           4 TDTAEQVIASFRIL-ASDKPYILAEELRRELP--------PDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALYG   69 (73)
T ss_dssp             CSTHHHHHHHHHHH-TTSCSSBCHHHHHHHSC--------HHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHTC
T ss_pred             cccHHHHHHHHHHH-hCCCCeeCHHHHHhhcC--------HHHHHHHHHHCcccCCCCCCCCcccHHHHHHHHhc
Confidence            45678899999999 56789999999998663        5668888888742    2 3578999999987653

>d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Endo-1,4-beta-xylanase Y
species: Clostridium thermocellum [TaxId: 1515]

Probab=92.16  E-value=0.14  Score=34.11  Aligned_cols=51  Identities=18%  Similarity=0.225  Sum_probs=22.1

Q ss_pred             cCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHH
Q 043828          433 DVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVL  485 (586)
Q Consensus       433 D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l  485 (586)
                      |.|+||.|+..+...+...........+  ..|...|.|+||.|+..++..+.
T Consensus         2 DvN~Dg~vni~D~~~l~~~il~~~~~~~--~~~~aaDvn~Dg~i~i~D~~~l~   52 (59)
T d2cclb1           2 DVNGDGTINSTDLTMLKRSVLRAITLTD--DAKARADVDKNGSINAADVLLLS   52 (59)
T ss_dssp             CTTCSSSCCHHHHHHHHHHHTTSSCCCH--HHHHHHCTTCSSCCSHHHHHHHH
T ss_pred             CCCCCCCCcHHHHHHHHHHHhCCCCCCh--hhhhccccCCCCCCCHHHHHHHH
Confidence            4455555555555443332221111111  12444555555555555554443

>d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=91.18  E-value=0.46  Score=31.20  Aligned_cols=66  Identities=18%  Similarity=0.299  Sum_probs=53.2

Q ss_pred             hhHHHHHHhhhcCCCCCcccHHHHHHHHHhcCCCCCCHHHHHHHHHHhc-CCCC-CceeHHHHHHHHhc
Q 043828          458 DDILSQAFRFFDKNQSGFIEVDELKEVLLEDNAGPNGDQTIRDILRDVD-LDRD-GRISFEEFKAMMTS  524 (586)
Q Consensus       458 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d-~~~d-g~i~~~eF~~~~~~  524 (586)
                      .++..++|..||+|....-...+-..+|..+|...+ ..+.+.++.+.- ..|| ..|.-+|++.+...
T Consensus        13 kdecmkifdifdrnaeniapvsdtmdmltklgqtyt-kreteaimkeargpkgdkknigpeewltlcsk   80 (86)
T d1j7qa_          13 KDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYT-KRETEAIMKEARGPKGDKKNIGPEEWLTLCSK   80 (86)
T ss_dssp             HHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCS-HHHHHHHHHHHHCSSCSSCCBCTTHHHHHHHH
T ss_pred             HHHHHHHHHHHhccccccCCcchHHHHHHHhhhHHh-HHHHHHHHHHhcCCCCccccCCHHHHHHHHHH
Confidence            456778999999999999999999999999999887 778888887762 2332 46888899887763

>d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=90.63  E-value=0.21  Score=36.94  Aligned_cols=63  Identities=17%  Similarity=0.147  Sum_probs=42.3

Q ss_pred             HhHHHHhhhhccCCCCCCcCHHHHHHHHHhc-C-CCCCHHHHHHHHHHhcCCC----CCcccHhHHHhhh
Q 043828          386 MAQIKQMFYMMDTDKNGDLTFEELKDGLNMI-G-QKVSDPDVKMLMEAADVDG----NGLLSCDEFVTMS  449 (586)
Q Consensus       386 ~~~~~~~F~~~D~~~~G~i~~~el~~~l~~~-~-~~~~~~~~~~~~~~~D~d~----dg~i~~~eF~~~~  449 (586)
                      ..++..+|..+-.+ .+.+|.++|...|... + ...+.+.+..++..+..+.    .|.+++++|...+
T Consensus         7 R~ei~~if~~ys~~-~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL   75 (94)
T d1qasa1           7 RAEIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYL   75 (94)
T ss_dssp             CHHHHHHHHHHHTT-SSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHH
T ss_pred             cHHHHHHHHHHhCC-CCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHH
Confidence            35667777777544 3568888888888764 3 2356667788888876653    3567777777643

>d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Cellulosome endoglucanase SS
species: Clostridium thermocellum [TaxId: 1515]

Probab=89.34  E-value=0.11  Score=36.17  Aligned_cols=52  Identities=19%  Similarity=0.158  Sum_probs=30.8

Q ss_pred             cCCCCCcccHhHHHhhhhhhccCCchhHHHHHHhhhcCCCCCcccHHHHHHHHHhc
Q 043828          433 DVDGNGLLSCDEFVTMSVHLKRIGNDDILSQAFRFFDKNQSGFIEVDELKEVLLED  488 (586)
Q Consensus       433 D~d~dg~i~~~eF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~  488 (586)
                      |.|+||.|+..+...+............    +...|.|+||.|+..++..+.+.+
T Consensus         8 DvN~DG~Vd~~D~~~~~~~i~~~~~~~~----~~~aDvn~DG~Id~~D~~~l~~~i   59 (71)
T d1dava_           8 DVNDDGKVNSTDAVALKRYVLRSGISIN----TDNADLNEDGRVNSTDLGILKRYI   59 (71)
T ss_dssp             CSSSSSBSSGGGHHHHHHHHHCSCSCCC----GGGTCSSSSSSCSSHHHHHHHHHT
T ss_pred             ccCCCCCCcHHHHHHHHHHHcCCCCcCC----CcceecCCCCCcCHHHHHHHHHHH
Confidence            6677777777776665444322211111    234677888888877777666543

>d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Endo-1,4-beta-xylanase Y
species: Clostridium thermocellum [TaxId: 1515]

Probab=86.42  E-value=0.73  Score=30.44  Aligned_cols=50  Identities=22%  Similarity=0.334  Sum_probs=38.2

Q ss_pred             cCCCCCCcCHHHHHHHHHhc-CC-CCCHHHHHHHHHHhcCCCCCcccHhHHHhhhh
Q 043828          397 DTDKNGDLTFEELKDGLNMI-GQ-KVSDPDVKMLMEAADVDGNGLLSCDEFVTMSV  450 (586)
Q Consensus       397 D~~~~G~i~~~el~~~l~~~-~~-~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~  450 (586)
                      |.|+||.|+..++..+.+.+ +. .++..    -+...|.|+||.|+-.+...+.+
T Consensus         2 DvN~Dg~vni~D~~~l~~~il~~~~~~~~----~~~aaDvn~Dg~i~i~D~~~l~~   53 (59)
T d2cclb1           2 DVNGDGTINSTDLTMLKRSVLRAITLTDD----AKARADVDKNGSINAADVLLLSR   53 (59)
T ss_dssp             CTTCSSSCCHHHHHHHHHHHTTSSCCCHH----HHHHHCTTCSSCCSHHHHHHHHH
T ss_pred             CCCCCCCCcHHHHHHHHHHHhCCCCCChh----hhhccccCCCCCCCHHHHHHHHH
Confidence            78999999999998888764 32 23332    36778999999999988876554

>d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Cellulosome endoglucanase SS
species: Clostridium thermocellum [TaxId: 1515]

Probab=84.21  E-value=0.17  Score=35.16  Aligned_cols=51  Identities=10%  Similarity=0.214  Sum_probs=37.7

Q ss_pred             cCCCCCCcCHHHHHHHHHhc-CCCCCHHHHHHHHHHhcCCCCCcccHhHHHhhhhhh
Q 043828          397 DTDKNGDLTFEELKDGLNMI-GQKVSDPDVKMLMEAADVDGNGLLSCDEFVTMSVHL  452 (586)
Q Consensus       397 D~~~~G~i~~~el~~~l~~~-~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~  452 (586)
                      |.|.||.|+..++..+++.+ +.. +..+    +...|.|+||.|+..++..+.+..
T Consensus         8 DvN~DG~Vd~~D~~~~~~~i~~~~-~~~~----~~~aDvn~DG~Id~~D~~~l~~~i   59 (71)
T d1dava_           8 DVNDDGKVNSTDAVALKRYVLRSG-ISIN----TDNADLNEDGRVNSTDLGILKRYI   59 (71)
T ss_dssp             CSSSSSBSSGGGHHHHHHHHHCSC-SCCC----GGGTCSSSSSSCSSHHHHHHHHHT
T ss_pred             ccCCCCCCcHHHHHHHHHHHcCCC-CcCC----CcceecCCCCCcCHHHHHHHHHHH
Confidence            78999999999998888765 322 2111    225799999999999998765543