Citrus Sinensis ID: 043866

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------45

MQLPKPIKVSPIVDENPIFENGKEDQPLSPMSRLFHEPESNLYIVVMIGFKSKINPDFVKANLGHSLLKHHRFSSLQVEDEKIKGGLKWVPTKVNLDNHVIVPNLEPKSIDSADKFVEDYVSNLSKTGIKMSKQPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLVSLFLSCTRKVSNPEELPSNSIPPTSKEGDSRSYGIKGFWPYLSFKYFWFVFSLFYNTLVDAVMVIATILMFVKDSETPLKGIMGKASGPRRTVHRSLSLDDFKNVKNAMNTTINDAVVAVTQAGLSRNLNRKYGELLLVNKGASERNNNLPKNIRLRAAIMKDLRSSGEVQELADIVKNGYKTKSGNKIGFVIFPFSIALRDDPLDYLREAKARMDRKKASLEAEFSYLLSQYTVKFGIKGANCPSKTTLLFSNVNGPQEEISFYGHPIAYVAPSCYGQTN

cccccccccccccccccccccccccccccHHHHHHccccccEEEEEEEEEcccccHHHHHHHHHHHHHHcccccccEEEcccccccEEEEcccccccccEEEccccccccccHHHHHHHHHHHHHccccccccccccEEEEEEEccccccEEEEEEEEccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEEEEHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcHHHHHccccccccccccccccEEEEEEcccccccHHHHHHHHHHcccccccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccccccccEEEEEccccccccEEEcccEEEEEccccccccc

ccccccEEEEEccccccccccccccccccHHHHHHccccccEEEEEEEEEcccccHHHHHHHHHHHHHccccccEEEEcccccccccEEEEEEEcccccEEEccccccccccHHHHHHHHHHHHHcccccccccccEEEEEEEcccccHHHEEEEEEEHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEEEEccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEEcccccccHHHHHHHHcccccccccccEEEEEEEccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcHHHHHHHcccEEEEEcccccccEEEEccccEEEEccccccccc

mqlpkpikvspivdenpifengkedqplspmsrlfhepesnLYIVVMIGFkskinpdfvKANLGhsllkhhrfsslqvedekikgglkwvptkvnldnhvivpnlepksidsaDKFVEDYVSNLSKTgikmskqpmwdlhllniktsdaESVAVLRVHHSLGDGTSLVSLFLSCtrkvsnpeelpsnsipptskegdsrsygikgfwpylsFKYFWFVFSLFYNTLVDAVMVIATILMFVKdsetplkgimgkasgprrtvhrslslddfKNVKNAMNTTINDAVVAVTQAGLSRNLNRKYGELLLVNkgasernnnlpkNIRLRAAIMKDLRSSGEVQELADIVKNgyktksgnkigfvifpfsialrddplDYLREAKARMDRKKASLEAEFSYLLSQYTVKfgikgancpskttllfsnvngpqeeisfyghpiayvapscygqtn

mqlpkpikvspivdenpifengkedqplsPMSRLFHEPESNLYIVVMIGFKSKINPDFVKANLGHSLLKHHRFSSLQVEDEKIKGglkwvptkvnldnhvivpnlepksidsadKFVEDYVSNLSKTGIKMSKQPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLVSLFLSCTRKvsnpeelpsnsipptskegdsrSYGIKGFWPYLSFKYFWFVFSLFYNTLVDAVMVIATILMFVKDSETPLKgimgkasgprrtvhrslslDDFKNVKNAMNTTINDAVVAVTQAGLSRNLNRKYGELLLvnkgasernnnlpknIRLRAAIMKDLrssgevqeLADIVKngyktksgnkiGFVIFPFSIALRDDPLDYLREAKARMDRKKASLEAEFSYLLSQYTVKFGIKGANCPSKTTLLFSNVNGPQEEISFYGHPIAYVAPSCYGQTN

***************************************SNLYIVVMIGFKSKINPDFVKANLGHSLLKHHRFSSLQVEDEKIKGGLKWVPTKVNLDNHVIVPNLEPKSIDSADKFVEDYVSNLSKTGIKMSKQPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLVSLFLSCTR************************YGIKGFWPYLSFKYFWFVFSLFYNTLVDAVMVIATILMFVKDSET*********************LDDFKNVKNAMNTTINDAVVAVTQAGLSRNLNRKYGELLLVNK************IRLRAAIMKDL****EVQELADIVKNGYKTKSGNKIGFVIFPFSIALRDDPLDYLREAK********SLEAEFSYLLSQYTVKFGIKGANCPSKTTLLFSNVNGPQEEISFYGHPIAYVAPSCY****

*****************************PMSRLFHEPESNLYIVVMIGFKSKINPDFVKANLGHSLLKHHRFSSLQVEDEKIKGGLKWVPTKVNLDNHVIVPNLEPKSIDSADKFVEDYVSNLSKTGIKMSKQPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLVSLFLSCTRKVSNPEELP********************FWPYLSFKYFWFVFSLFYNTLVDAVMVIATILMFVKDSETPLKGIMGKASGPRRTVHRSLSLDDFKNVKNAMNTTINDAVVAVTQAGLSRNLNRKYGELLLV****SERNNNLPKNIRLRAAIMKDLRSSGEVQEL******GYKTKSGNKIGFVIFPFSIALRDDPLDYLREAK***********AEFSYLLSQYTVKFGIKGANCPSKTTLLFSNVNGPQEEISFYGHPIAYVAPSCYG***

MQLPKPIKVSPIVDENPIFENGKEDQPLSPMSRLFHEPESNLYIVVMIGFKSKINPDFVKANLGHSLLKHHRFSSLQVEDEKIKGGLKWVPTKVNLDNHVIVPNLEPKSIDSADKFVEDYVSNLSKTGIKMSKQPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLVSLFLSCTRKV*********************SYGIKGFWPYLSFKYFWFVFSLFYNTLVDAVMVIATILMFVKDSETPLKGIMGK********HRSLSLDDFKNVKNAMNTTINDAVVAVTQAGLSRNLNRKYGELLLVNKGASERNNNLPKNIRLRAAIMKDLRSSGEVQELADIVKNGYKTKSGNKIGFVIFPFSIALRDDPLDYLREAKARMDRKKASLEAEFSYLLSQYTVKFGIKGANCPSKTTLLFSNVNGPQEEISFYGHPIAYVAPSCYGQTN

MQLPKPIKVSPIVDENPIFENGKEDQPLSPMSRLFHEPESNLYIVVMIGFKSKINPDFVKANLGHSLLKHHRFSSLQVEDEKIKGGLKWVPTKVNLDNHVIVPNLEPKSIDSADKFVEDYVSNLSKTGIKMSKQPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLVSLFLSCTRKVSNPEELPSNS*************GIKGFWPYLSFKYFWFVFSLFYNTLVDAVMVIATILMFVKDSETPLKGIMGKASGPRRTVHRSLSLDDFKNVKNAMNTTINDAVVAVTQAGLSRNLNRKYG**************NLPKNIRLRAAIMKDLRSSGEVQELADIVKNGYKTKSGNKIGFVIFPFSIALRDDPLDYLREAKARMDRKKASLEAEFSYLLSQYTVKFGIKGANCPSKTTLLFSNVNGPQEEISFYGHPIAYVAPSCYGQ**

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MQLPKPIKVSPIVDENPIFENGKEDQPLSPMSRLFHEPESNLYIVVMIGFKSKINPDFVKANLGHSLLKHHRFSSLQVEDEKIKGGLKWVPTKVNLDNHVIVPNLEPKSIDSADKFVEDYVSNLSKTGIKMSKQPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLVSLFLSCTRKVSNPEELPSNSIPPTSKEGDSRSYGIKGFWPYLSFKYFWFVFSLFYNTLVDAVMVIATILMFVKDSETPLKGIMGKASGPRRTVHRSLSLDDFKNVKNAMNTTINDAVVAVTQAGLSRNLNRKYGELLLVNKGASERNNNLPKNIRLRAAIMKDLRSSGEVQELADIVKNGYKTKSGNKIGFVIFPFSIALRDDPxxxxxxxxxxxxxxxxxxxxxFSYLLSQYTVKFGIKGANCPSKTTLLFSNVNGPQEEISFYGHPIAYVAPSCYGQTN

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		449	2.2.26 [Sep-21-2011]
Q93ZR6		481	O-acyltransferase WSD1 OS	no	no	0.888	0.829	0.414	7e-89
P67211		454	Putative diacyglycerol O-	yes	no	0.592	0.585	0.263	0.0002
P67210		454	Probable diacyglycerol O-	yes	no	0.592	0.585	0.263	0.0002
P67205		505	Putative diacyglycerol O-	no	no	0.579	0.514	0.241	0.0003
P67204		505	Putative diacyglycerol O-	no	no	0.579	0.514	0.241	0.0003

>sp\|Q93ZR6\|WSD1_ARATH O-acyltransferase WSD1 OS=Arabidopsis thaliana GN=WSD1 PE=2 SV=1	Back alignment and function desciption

 Score =  328 bits (840), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 176/425 (41%), Positives = 268/425 (63%), Gaps = 26/425 (6%)

Query: 26  QPLSPMSRLFHEPESNLYIVVMIGFKSKINPDFVKANLGHSLLKHHRFSSLQVEDEKIKG 85
           +PLSPMS +   P  N +IV+  GFK++ N       + ++L+   RFSS    + K KG
Sbjct: 17  EPLSPMSHMLSSP--NFFIVITFGFKTRCNRSAFVDGINNTLINAPRFSSKMEINYKKKG 74

Query: 86  GLKWVPTKVNLDNHVIVPNLEPKSIDSADKFVEDYVSNLSKTGIKMSKQPMWDLHLLNIK 145
              W+P K+ +D+H+IVP+LE  +I + D+FVEDY SN++   + MSK P+W+ HLLN+K
Sbjct: 75  EPVWIPVKLRVDDHIIVPDLEYSNIQNPDQFVEDYTSNIANIPMDMSK-PLWEFHLLNMK 133

Query: 146 TSDAESVAVLRVHHSLGDGTSLVSLFLSCTRKVSNPEELPSNSIPPTSKEGDSRSYGIKG 205
           TS AES+A++++HHS+GDG SL+SL L+C+RK+S+P+ L SN+   T K  DS ++    
Sbjct: 134 TSKAESLAIVKIHHSIGDGMSLMSLLLACSRKISDPDALVSNT-TATKKPADSMAW---- 188

Query: 206 FWPYLSFKYFWFVFSLFYNTLVDAVMVIATILMFVKDSETPLKGIMGKASGPRRTVHRSL 265
            W ++ F   WF+  + + T+V+   ++ T+  F++D++ PL G         + VHR +
Sbjct: 189 -WLFVGF---WFMIRVTFTTIVEFSKLMLTVC-FLEDTKNPLMGNPSDGFQSWKVVHRII 243

Query: 266 SLDDFKNVKNAMNTTINDAVVAVTQAGLSRNLNRKYGELLLVNKGASERNNNLPKNIRLR 325
           S +D K +K+ MN  +ND ++ +TQAGLSR L+ KY        G++     + + +R+R
Sbjct: 244 SFEDVKLIKDTMNMKVNDVLLGMTQAGLSRYLSSKY-------DGSTAEKKKILEKLRVR 296

Query: 326 AAIMKDLRSSGEVQELADIVKNGYKTKSGNKIGFVIFPFSIALRDDPLDYLREAKARMDR 385
            A+  +LR + ++++LAD++  G K + GN IG VIFP  +    DPL+Y+R AKA MDR
Sbjct: 297 GAVAINLRPATKIEDLADMMAKGSKCRWGNFIGTVIFPLWVKSEKDPLEYIRRAKATMDR 356

Query: 386 KKASLEAEFSYLLSQYTVK-FGIKGANCPSK-----TTLLFSNVNGPQEEISFYGHPIAY 439
           KK SLEA F Y + ++T+K FG K      K     T+L FSNV GP EEISF+ HPI+Y
Sbjct: 357 KKISLEAFFFYGIIKFTLKFFGGKAVEAFGKRIFGHTSLAFSNVKGPDEEISFFHHPISY 416

Query: 440 VAPSC 444
           +A S 
Sbjct: 417 IAGSA 421

Bifunctional wax ester synthase/diacylglycerol acyltransferase. Involved in cuticular wax biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 7EC: 5

>sp\|P67211\|Y3761_MYCBO Putative diacyglycerol O-acyltransferase Mb3761c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb3761c PE=3 SV=1	Back alignment and function description

>sp\|P67210\|TGS2_MYCTU Probable diacyglycerol O-acyltransferase tgs2 OS=Mycobacterium tuberculosis GN=tgs2 PE=1 SV=1	Back alignment and function description

>sp\|P67205\|Y919_MYCBO Putative diacyglycerol O-acyltransferase Mb0919 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=Mb0919 PE=3 SV=1	Back alignment and function description

>sp\|P67204\|Y895_MYCTU Putative diacyglycerol O-acyltransferase Rv0895/MT0919 OS=Mycobacterium tuberculosis GN=Rv0895 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		449
224146250		496	predicted protein [Populus trichocarpa]	0.973	0.881	0.571	1e-136
225454542		513	PREDICTED: O-acyltransferase WSD1 [Vitis	0.944	0.826	0.541	1e-131
359489554		473	PREDICTED: LOW QUALITY PROTEIN: O-acyltr	0.917	0.871	0.540	1e-128
224146248		495	predicted protein [Populus trichocarpa]	0.955	0.866	0.552	1e-127
297745467		1045	unnamed protein product [Vitis vinifera]	0.902	0.387	0.545	1e-125
225470892		514	PREDICTED: O-acyltransferase WSD1 [Vitis	0.902	0.787	0.545	1e-125
255564707		506	conserved hypothetical protein [Ricinus	0.919	0.816	0.553	1e-124
225470890		508	PREDICTED: O-acyltransferase WSD1-like [	0.910	0.805	0.538	1e-121
297745460		531	unnamed protein product [Vitis vinifera]	0.899	0.760	0.539	1e-119
359489561		607	PREDICTED: LOW QUALITY PROTEIN: O-acyltr	0.899	0.665	0.539	1e-119

>gi\|224146250\|ref\|XP_002325937.1\| predicted protein [Populus trichocarpa] gi\|222862812\|gb\|EEF00319.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 257/450 (57%), Positives = 335/450 (74%), Gaps = 13/450 (2%)

Query: 1   MQLPKPIKVSPIVDENPIFENGKEDQPLSPMSRLFHEPESNLYIVVMIGFKSKINPDFVK 60
           +Q  KPIK +  VD      + +E+QPLSP++R+FHE +S +YI+V+IGF++++NP+ +K
Sbjct: 3   IQAIKPIKTTKNVDITS--SSAEEEQPLSPVARMFHESDSTVYIIVIIGFETQLNPEVIK 60

Query: 61  ANLGHSLLKHHRFSSLQVEDEKIKGGLKWVPTKVNLDNHVIVPNLEPKSIDSADKFVEDY 120
           ANLGH+LL   RF SLQV DEK  G LKWV T V+LDNHV VP L+P ++DS D FVEDY
Sbjct: 61  ANLGHTLLSQPRFCSLQVPDEKRGGELKWVRTVVDLDNHVKVPTLDP-NMDSPDMFVEDY 119

Query: 121 VSNLSKTGIKMSKQPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLVSLFLSCTRKVSN 180
           VSNLSKTGI MS  PMWDLHLLNIKTSDAESV VLRVHHSLGDGTSL++LF+SCTRKVS+
Sbjct: 120 VSNLSKTGISMS-IPMWDLHLLNIKTSDAESVGVLRVHHSLGDGTSLMTLFMSCTRKVSD 178

Query: 181 PEELPSNSIPPTSKEGDSRSYGIKGFWPYLSFKYFWFVFSLFYNTLVDAVMVIATILMFV 240
           PE LP  S+P   K+    S G  GF  Y  F   + V  L++NT VD VM   T   ++
Sbjct: 179 PEALP--SLPMNMKKKHGSSSG--GFLQY--FIKLFSVLLLYWNTFVDVVMFFITTF-YL 231

Query: 241 KDSETPLKGIMGKASGPRRTVHRSLSLDDFKNVKNAMNTTINDAVVAVTQAGLSRNLNRK 300
            D++TPLKG +G AS PRR VHR++SL+D K VKNAMN T+ND +V VT+A L+RNLNRK
Sbjct: 232 DDTKTPLKGPLGVASTPRRIVHRTVSLEDVKLVKNAMNVTVNDVMVGVTEAALTRNLNRK 291

Query: 301 YGELLLVNKGASERNNNLPKNIRLRAAIMKDLRSSGEVQELADIVKNGYKTKSGNKIGFV 360
           YG+ +    G +E +NNLPKNIRLRA    +LR     +++++++K+  K K GN IG+V
Sbjct: 292 YGK-IKEEAGGAEGHNNLPKNIRLRATHFVNLRPYLVNEDVSEMIKSSSKVKLGNLIGYV 350

Query: 361 IFPFSIALRDDPLDYLREAKARMDRKKASLEAEFSYLLSQYTVK-FGIKGANCPSKTTLL 419
           IFPF+I LR+D LD++R AKA   RKKASLEA ++YL++++ +K F  K A+ P++TTL 
Sbjct: 351 IFPFTIGLREDVLDHVRSAKATGKRKKASLEALYTYLMAKFFIKFFSAKWASFPTQTTLW 410

Query: 420 FSNVNGPQEEISFYGHPIAYVAPSCYGQTN 449
           +SNV GPQEE++ +GH +AYVAP+CYGQ N
Sbjct: 411 YSNVPGPQEEVTCFGHQVAYVAPTCYGQPN 440

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225454542\|ref\|XP_002278404.1\| PREDICTED: O-acyltransferase WSD1 [Vitis vinifera] gi\|297745452\|emb\|CBI40532.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359489554\|ref\|XP_003633936.1\| PREDICTED: LOW QUALITY PROTEIN: O-acyltransferase WSD1-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224146248\|ref\|XP_002325936.1\| predicted protein [Populus trichocarpa] gi\|222862811\|gb\|EEF00318.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|297745467\|emb\|CBI40547.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|225470892\|ref\|XP_002263409.1\| PREDICTED: O-acyltransferase WSD1 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255564707\|ref\|XP_002523348.1\| conserved hypothetical protein [Ricinus communis] gi\|223537436\|gb\|EEF39064.1\| conserved hypothetical protein [Ricinus communis]	Back alignment and taxonomy information

>gi\|225470890\|ref\|XP_002263252.1\| PREDICTED: O-acyltransferase WSD1-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|297745460\|emb\|CBI40540.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359489561\|ref\|XP_003633939.1\| PREDICTED: LOW QUALITY PROTEIN: O-acyltransferase WSD1-like [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		449
TAIR\|locus:2082921		507	AT3G49200 [Arabidopsis thalian	0.919	0.814	0.485	1e-98
TAIR\|locus:2082906		522	AT3G49190 [Arabidopsis thalian	0.928	0.798	0.484	2.9e-96
TAIR\|locus:2082936		518	AT3G49210 [Arabidopsis thalian	0.946	0.820	0.466	5.9e-96
TAIR\|locus:2154287		486	FOP1 "FOLDED PETAL 1" [Arabido	0.906	0.837	0.442	2.2e-89
TAIR\|locus:505006610		480	AT5G12420 [Arabidopsis thalian	0.928	0.868	0.437	5.3e-88
TAIR\|locus:2154282		483	AT5G53380 [Arabidopsis thalian	0.933	0.867	0.442	2.9e-87
TAIR\|locus:2171372		488	AT5G16350 [Arabidopsis thalian	0.930	0.856	0.432	1e-84
TAIR\|locus:2171152		482	AT5G22490 [Arabidopsis thalian	0.908	0.846	0.426	5.8e-82
TAIR\|locus:2030332		479	AT1G72110 [Arabidopsis thalian	0.899	0.843	0.405	1.8e-80
TAIR\|locus:2169175		481	WSD1 [Arabidopsis thaliana (ta	0.585	0.546	0.409	1.6e-54

TAIR\|locus:2082921 AT3G49200 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 980 (350.0 bits), Expect = 1.0e-98, P = 1.0e-98
 Identities = 214/441 (48%), Positives = 299/441 (67%)

Query:    23 KEDQPLSPMSRLFHEPESNLYIVVMIGFKSKINPDFVKANLGHSLLKHHRFSSLQVED-E 81
             +E+QPLSP +RLFH PE N YI+ ++G K+KI PD +   +  +L++H RFSS  V +  
Sbjct:    23 EEEQPLSPAARLFHAPEFNCYIISVVGLKNKIEPDMIIEGIKQTLMRHPRFSSKLVNNCN 82

Query:    82 KIKGGLKWVPTKVNLDNHVIVPNLEPKSIDSA--DKFVEDYVSNLSKTGIKMSKQPMWDL 139
               +   KWV T V +++HVI+P ++ + I++A  D F+E YVS+L+   +  SK P+W++
Sbjct:    83 NNRQEQKWVRTNVVVEDHVIIPKIQTQHIENANADVFLESYVSDLTTIPLDTSK-PLWEV 141

Query:   140 HLLNIKTSDAESVAVLRVHHSLGDGTSLVSLFLSCTRKVSNPEELPS----N--SIPPTS 193
             HLL++KTSDAE+VAVLR+HHSLGDG S++SL L+CTRK SNP ELPS    N  S   +S
Sbjct:   142 HLLDLKTSDAENVAVLRIHHSLGDGMSMMSLVLACTRKTSNPNELPSLPYQNRPSSGSSS 201

Query:   194 KEGDSRSYGIKGFWPYLSFKYFWFVFSLFYNTLVDAVMVIATILMFVKDSETPLKGIMGK 253
              +  SR Y  + FW  +     W    L  NT+ DA+  IAT L F+KD+ETP+KG    
Sbjct:   202 LKTSSRCYS-RFFWLVM---VLWSAALLVLNTVCDALEFIATAL-FLKDTETPIKGDFKL 256

Query:   254 ASGPRRT-VHRSLSLDDFKNVKNAMNTTINDAVVAVTQAGLSRNLNRKYGELLLVNKGAS 312
             + G R   VHR++SLDD K +KNAM  T+ND V+ V+QAGLS+ L R+YGE     +  S
Sbjct:   257 SKGKRMCMVHRTVSLDDIKLIKNAMKMTVNDVVLGVSQAGLSQYLKRRYGE-----QEES 311

Query:   313 ERNN-NLPKNIRLRAAIMKDLRSSGEVQELADIVKNGYKTKSGNKIGFVIFPFSIALRDD 371
             +RN+ N+PK IRLRAA++ +LR +  +Q+LAD++  G K + GN IG++IFPFSIAL DD
Sbjct:   312 KRNSSNIPKGIRLRAALLVNLRPTTGIQDLADMMTKGSKCRWGNWIGYIIFPFSIALCDD 371

Query:   372 PLDYLREAKARMDRKKASLEAEFSYLLSQYTVK-FGI-KGAN----CPSKTTLLFSNVNG 425
             PL +LR AK+ +DRKK SLEA  ++++ +  +   G+ + AN      S TT+ FSN+ G
Sbjct:   372 PLKHLRRAKSTIDRKKNSLEAVLTFVVGKILLNTLGVQRAANVLNRALSNTTMSFSNLVG 431

Query:   426 PQEEISFYGHPIAYVAPSCYG 446
             P EEISFYGH + Y+APS YG
Sbjct:   432 PVEEISFYGHTVTYIAPSVYG 452

GO:0004144 "diacylglycerol O-acyltransferase activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

TAIR\|locus:2082906 AT3G49190 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2082936 AT3G49210 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2154287 FOP1 "FOLDED PETAL 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:505006610 AT5G12420 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2154282 AT5G53380 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2171372 AT5G16350 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2171152 AT5G22490 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2030332 AT1G72110 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2169175 WSD1 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pm.C_LG_XIX0175	hypothetical protein (496 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		449
pfam06974		153	pfam06974, DUF1298, Protein of unknown function (D	2e-42
TIGR02946		446	TIGR02946, acyl_WS_DGAT, acyltransferase, WS/DGAT/	6e-22
pfam03007		263	pfam03007, WES_acyltransf, Wax ester synthase-like	2e-06
pfam00668		300	pfam00668, Condensation, Condensation domain	0.001

>gnl\|CDD\|191657 pfam06974, DUF1298, Protein of unknown function (DUF1298)	Back alignment and domain information

 Score =  146 bits (371), Expect = 2e-42
 Identities = 61/106 (57%), Positives = 76/106 (71%), Gaps = 6/106 (5%)

Query: 348 GYKTKSGNKIGFVIFPFSIALRDDPLDYLREAKARMDRKKASLEAEFSYLLSQYTVK-FG 406
           G K + GN  G+V+ PFSIAL DDPL+Y+R+AKA +DRKK SLEA F+Y + ++ +K FG
Sbjct: 2   GSKCRWGNYFGYVLLPFSIALEDDPLEYVRKAKATIDRKKHSLEAAFTYGIIKFVLKVFG 61

Query: 407 IKGANC-----PSKTTLLFSNVNGPQEEISFYGHPIAYVAPSCYGQ 447
           IK A        S TT+ FSNV GP EEISF+GHPI Y+APS YG 
Sbjct: 62  IKAAAALFNRIFSNTTMCFSNVVGPVEEISFFGHPITYIAPSSYGH 107

This family represents the C-terminus (approximately 170 residues) of a number of hypothetical plant proteins of unknown function. Length = 153

>gnl\|CDD\|234068 TIGR02946, acyl_WS_DGAT, acyltransferase, WS/DGAT/MGAT	Back alignment and domain information

>gnl\|CDD\|111851 pfam03007, WES_acyltransf, Wax ester synthase-like Acyl-CoA acyltransferase domain	Back alignment and domain information

>gnl\|CDD\|216052 pfam00668, Condensation, Condensation domain	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		449
TIGR02946		446	acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This b	100.0
PF03007		263	WES_acyltransf: Wax ester synthase-like Acyl-CoA a	100.0
PF00668		301	Condensation: Condensation domain; InterPro: IPR00	99.87
PRK12467		3956	peptide synthase; Provisional	99.86
PRK12467		3956	peptide synthase; Provisional	99.85
PRK10252		1296	entF enterobactin synthase subunit F; Provisional	99.84
PRK12316		5163	peptide synthase; Provisional	99.83
PRK12316		5163	peptide synthase; Provisional	99.81
PRK05691		4334	peptide synthase; Validated	99.8
COG4908		439	Uncharacterized protein containing a NRPS condensa	99.79
PRK05691		4334	peptide synthase; Validated	99.79
PRK09294		416	acyltransferase PapA5; Provisional	99.76
PF06974		153	DUF1298: Protein of unknown function (DUF1298); In	99.73
PF07247		480	AATase: Alcohol acetyltransferase; InterPro: IPR01	99.72
PLN02481		436	Omega-hydroxypalmitate O-feruloyl transferase	97.88
PLN02663		431	hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinn	97.83
PLN03157		447	spermidine hydroxycinnamoyl transferase; Provision	97.71
PF02458		432	Transferase: Transferase family; InterPro: IPR0034	97.62
PLN00140		444	alcohol acetyltransferase family protein; Provisio	97.34
PF07428		413	Tri3: 15-O-acetyltransferase Tri3; InterPro: IPR00	94.99
COG1020		642	EntF Non-ribosomal peptide synthetase modules and	94.0
TIGR03443		1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	91.48

>TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT	Back alignment and domain information

Probab=100.00  E-value=1.7e-45  Score=382.10  Aligned_cols=371  Identities=25%  Similarity=0.312  Sum_probs=276.6

Q ss_pred             CChhhhccc--CCCCCeE-EEEEEEecCCCCHHHHHHHHHHHhhhccccceeeeecccCCCeeEEee-eccCCcceeEec
Q 043866           28 LSPMSRLFH--EPESNLY-IVVMIGFKSKINPDFVKANLGHSLLKHHRFSSLQVEDEKIKGGLKWVP-TKVNLDNHVIVP  103 (449)
Q Consensus        28 Ls~~d~~~l--~~~~~~~-i~~~~~~~g~ld~~~l~~al~~~l~~~p~lr~~~~~~~~~~g~p~W~~-~~~d~~~hv~~~  103 (449)
                      ||+.|+.|+  +.+.+.+ +..++.++|++|.+.|++++..++.+||+||+++.......++++|+. .+++++.|+...
T Consensus         1 ls~~D~~~l~~e~~~~~~~~~~~~~l~g~ld~~~l~~al~~~~~rh~~LR~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~   80 (446)
T TIGR02946         1 LSPVDAAFLRLETPTRPMHIGALAVFEGPLSFEALRALLESRLPLAPRFRQRLREVPLGLGHPYWVEDPDFDLDYHVRRV   80 (446)
T ss_pred             CCHHHHHHHhccCCCCCceEEEEEEEcCCccHHHHHHHHHHhhccCChhhcccccCCCCCCCcEEeeCCCCChHHhhccc
Confidence            789999997  4444444 677789999999999999999999999999999987533357789988 889998888765


Q ss_pred             cCCCCCCCchHHHHHHHHHHHHhCCCCCCCCCceEEEEeeeeCCCCeEEEEEeeccccccCCcHHHHHHHhccccCCCCC
Q 043866          104 NLEPKSIDSADKFVEDYVSNLSKTGIKMSKQPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLVSLFLSCTRKVSNPEE  183 (449)
Q Consensus       104 ~l~~~~~~~~~~~l~~~~~~~~~~pld~~~~PlW~~~li~~~~~~~~~~l~lr~HH~l~DG~s~~~ll~~l~~~~~~p~~  183 (449)
                      +++..+   .++++++++++..+++||.++ |+|++++++++. ++++++++++||+++||+|+..++.++++.+.++..
T Consensus        81 ~~~~~~---~~~~~~~~~~~~~~~p~dl~~-Pl~r~~li~~~~-~~~~~l~~~~HH~i~DG~S~~~l~~~l~~~~~~~~~  155 (446)
T TIGR02946        81 ALPAPG---TRRELLELVGRLMSTPLDRSR-PLWEMHLIEGLA-GGRFAVLTKVHHALADGVAGLRLLARLLDDDPDPPP  155 (446)
T ss_pred             cCCCCC---CHHHHHHHHHHHhcCCCCCCC-CCeEEEEEeccC-CCeEEEEEEeehhhhchHHHHHHHHHHcCCCCCCCC
Confidence            555444   678899999999999999998 999999999653 578999999999999999999999999987533322


Q ss_pred             CCCCCCCCCCCCCCCCccCccCcchhhHHHHHHH-----HHHH------HHHH-HHHHHHH---HHHHhcccCCCCCccc
Q 043866          184 LPSNSIPPTSKEGDSRSYGIKGFWPYLSFKYFWF-----VFSL------FYNT-LVDAVMV---IATILMFVKDSETPLK  248 (449)
Q Consensus       184 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~------~~~~-~~~~~~~---~~~~~~~~~~p~t~~~  248 (449)
                      .+..   .+.. .  .       .+.++..|...     ....      .|.. +......   ......++.+|+++++
T Consensus       156 ~~~~---~~~~-~--~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (446)
T TIGR02946       156 LPAP---PPPP-Q--P-------STRGLLSGALSGLPSALLRRVASTAPGVVRAAGRAVEGVARSARPALPFTAPPTPLN  222 (446)
T ss_pred             CCCC---CCCC-C--C-------chhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCCCCCcCC
Confidence            1110   0000 0  0       01122221110     0000      1111 1110000   0000113456788888


Q ss_pred             cCCCCCCCCeEEEEEeeChHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhhchhhhhccccccccCCCCCCceeEEEE
Q 043866          249 GIMGKASGPRRTVHRSLSLDDFKNVKNAMNTTINDAVVAVTQAGLSRNLNRKYGELLLVNKGASERNNNLPKNIRLRAAI  328 (449)
Q Consensus       249 ~~~~~~~~~r~~~~~~~~~~~vk~ia~~~g~TvNDvllAa~a~aL~r~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~v  328 (449)
                      ++.++   .|.+.+..++++++|++++++|+|+|||++||++++|++|+.++|+               .+. ..++++|
T Consensus       223 ~~~~~---~r~~~~~~~~~~~l~~~a~~~g~T~ndvllaa~~~al~~~~~~~~~---------------~~~-~~i~~~~  283 (446)
T TIGR02946       223 GPISR---KRRFAAQSLPLADVKAVAKAFGVTINDVVLAAVAGALRRYLEERGE---------------LPD-DPLVAMV  283 (446)
T ss_pred             CCCCc---cceEEeeccCHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHcCC---------------CCC-CceEEEE
Confidence            88776   8888899999999999999999999999999999999999988774               344 3799999


Q ss_pred             EeeccCCchhhHHHHHHhcCCCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH---Hh-
Q 043866          329 MKDLRSSGEVQELADIVKNGYKTKSGNKIGFVIFPFSIALRDDPLDYLREAKARMDRKKASLEAEFSYLLSQYT---VK-  404 (449)
Q Consensus       329 Pvs~R~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~~~d~~~rL~~v~~~~~~~k~~~~~~~~~~~~~~~---~~-  404 (449)
                      |||+|...+            ...+||.++++.+.||++ .+||.++|++|+++|+.+|++.+....+.+..++   +. 
T Consensus       284 pv~~R~~~~------------~~~~~N~~~~~~~~l~~~-~~~~~~~l~~v~~~~~~~k~~~~~~~~~~~~~~~~~lP~~  350 (446)
T TIGR02946       284 PVSLRPMED------------DSEGGNQVSAVLVPLPTG-IADPVERLSAIHASMTRAKESGQAMGANALLALSGLLPAP  350 (446)
T ss_pred             eeecccccc------------CCCCCCEEEEEEecCCCC-CCCHHHHHHHHHHHHHHHHHhHhhcCHHHHHHHHHhccHH
Confidence            999998643            236999999999999997 7899999999999999999998877555543322   21 


Q ss_pred             hh---cccc-c-cCCCceeeeecCCCCccceeecCceeeEEecCcCCCC
Q 043866          405 FG---IKGA-N-CPSKTTLLFSNVNGPQEEISFYGHPIAYVAPSCYGQT  448 (449)
Q Consensus       405 ~~---~~~~-~-~~~~~~~~~SNvpGp~~~l~l~G~~v~~~~p~~~~~~  448 (449)
                      +.   .+.. . ....+|+++||||||+.+++++|++|+++|++.+..+
T Consensus       351 ~~~~~~~~~~~~~~~~~~~~~SNvpg~~~~~~~~g~~v~~~~~~~p~~~  399 (446)
T TIGR02946       351 LLRLALRALARKAQRLFNLVISNVPGPREPLYLAGAKLDELYPLSPLLD  399 (446)
T ss_pred             HHHHHHHHhhccCCCceeEEEeCCCCCCcccEecCeeEEEeeccccccC
Confidence            11   1111 1 1234699999999999999999999999999987643

This bacteria-specific protein family includes a characterized, homodimeric, broad specificity acyltransferase from Acinetobacter sp. strain ADP1, active as wax ester synthase, as acyl coenzyme A:diacylglycerol acyltransferase, and as acyl-CoA:monoacylglycerol acyltransferase.

>PF03007 WES_acyltransf: Wax ester synthase-like Acyl-CoA acyltransferase domain; InterPro: IPR004255 This entry represents the N terminus (approximately 170 residues) of a number of hypothetical plant proteins	Back alignment and domain information

>PF00668 Condensation: Condensation domain; InterPro: IPR001242 This domain is found in many multi-domain enzymes which synthesize peptide antibiotics	Back alignment and domain information

>PRK12467 peptide synthase; Provisional	Back alignment and domain information

>PRK12467 peptide synthase; Provisional	Back alignment and domain information

>PRK10252 entF enterobactin synthase subunit F; Provisional	Back alignment and domain information

>PRK12316 peptide synthase; Provisional	Back alignment and domain information

>PRK12316 peptide synthase; Provisional	Back alignment and domain information

>PRK05691 peptide synthase; Validated	Back alignment and domain information

>COG4908 Uncharacterized protein containing a NRPS condensation (elongation) domain [General function prediction only]	Back alignment and domain information

>PRK05691 peptide synthase; Validated	Back alignment and domain information

>PRK09294 acyltransferase PapA5; Provisional	Back alignment and domain information

>PF06974 DUF1298: Protein of unknown function (DUF1298); InterPro: IPR009721 This entry represents the C terminus (approximately 170 residues) of a number of hypothetical plant proteins	Back alignment and domain information

>PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2	Back alignment and domain information

>PLN02481 Omega-hydroxypalmitate O-feruloyl transferase	Back alignment and domain information

>PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase	Back alignment and domain information

>PLN03157 spermidine hydroxycinnamoyl transferase; Provisional	Back alignment and domain information

>PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes	Back alignment and domain information

>PLN00140 alcohol acetyltransferase family protein; Provisional	Back alignment and domain information

>PF07428 Tri3: 15-O-acetyltransferase Tri3; InterPro: IPR009992 This family represents a conserved region approximately 400 residues long within 15-O-acetyltransferase (Tri3), which seems to be restricted to ascomycete fungi	Back alignment and domain information

>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		449
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-12
2vsq_A		1304	Surfactin synthetase subunit 3; ligase, peptidyl c	2e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 68.3 bits (166), Expect = 2e-12
 Identities = 63/446 (14%), Positives = 113/446 (25%), Gaps = 166/446 (37%)

Query: 56  PDFVKANLGHSLLKHHRFSSLQVEDEKIKGGLKWVPTKVNLDNHVIVPN----------- 104
             FV             F    V+D       K + +K  +D+ ++  +           
Sbjct: 27  DAFVD-----------NFDCKDVQDM-----PKSILSKEEIDHIIMSKDAVSGTLRLFWT 70

Query: 105 LEPKSIDSADKFVED-----------------------------YVSNLSKTGIKMSK-- 133
           L  K  +   KFVE+                                 L       +K  
Sbjct: 71  LLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYN 130

Query: 134 ----QPMWDL--HLLNIKTSDAESVAVLRVHHSLGDG-TSLVSLFLSCTRKVSNPEELPS 186
               QP   L   LL ++   A++V +      LG G T +                   
Sbjct: 131 VSRLQPYLKLRQALLELR--PAKNVLI---DGVLGSGKTWVALDVCL------------- 172

Query: 187 NSIPPTSKEGDSRSYGIKGFWPYLSFKY-------------FWFVFSLFYNTLVDAVMVI 233
                + K      + I  FW  L+ K                +     + +  D     
Sbjct: 173 -----SYKVQCKMDFKI--FW--LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDH---S 220

Query: 234 ATILMFVKDSETPLKGIMGKASGPRRTVHRSL-SLDDFKNVK--NAMN-------TTIND 283
           + I + +   +  L+ ++             L  L + +N K  NA N       TT   
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPYEN-----CLLVLLNVQNAKAWNAFNLSCKILLTTRFK 275

Query: 284 AVVAVTQAGLSRNLNRKYGELLLVNKGASERNNN--LPKNIRLRAAIMKDLRSSGEVQEL 341
            V     A         +  L   +   +       L K +  R    +DL    EV   
Sbjct: 276 QVTDFLSAA-----TTTHISLDHHSMTLTPDEVKSLLLKYLDCRP---QDLPR--EVLT- 324

Query: 342 ADIVKNGYKTKSGNKIGFVIFPFSIAL-----RDDP--LDYLREAKA-RMDRK-KASLEA 392
                                P  +++     RD     D  +     ++    ++SL  
Sbjct: 325 -------------------TNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365

Query: 393 EFSYLLSQYTVKFGI--KGANCPSKT 416
                  +   +  +    A+ P+  
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAHIPTIL 391

PyMOL of 1vt4

>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Length = 1304	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		449
2jgp_A		520	Tyrocidine synthetase 3; multifunctional enzyme, a	99.95
1l5a_A		436	Amide synthase, VIBH; nonribosomal peptide synthet	99.93
1q9j_A		422	PAPA5, polyketide synthase associated protein 5; c	99.93
4hvm_A		493	Tlmii; PSI-biology, midwest center for structural	99.92
2xhg_A		466	Tyrocidine synthetase A; isomerase, nonribosomal p	99.92
2vsq_A		1304	Surfactin synthetase subunit 3; ligase, peptidyl c	99.92
3fot_A		519	15-O-acetyltransferase; fusarium head blight, tric	98.95
2bgh_A		421	Vinorine synthase; VS, BAHD, acetyltransferase, au	97.88
4g22_A		439	Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn	97.72
2xr7_A		453	Malonyltransferase; xenobiotics, naphthols; HET: M	97.68
2rkv_A		451	Trichothecene 3-O-acetyltransferase; BAHD superfam	97.21
2e1v_A		454	Acyl transferase; BAHD superfamily, seleno-methion	97.16

>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}	Back alignment and structure

Probab=99.95  E-value=7.9e-26  Score=237.25  Aligned_cols=338  Identities=13%  Similarity=0.085  Sum_probs=227.4

Q ss_pred             CCCCCCCChhhhccc-----CCCCCeE-EEEEEEecCCCCHHHHHHHHHHHhhhccccceeeeecccCCCeeEEee-ecc
Q 043866           22 GKEDQPLSPMSRLFH-----EPESNLY-IVVMIGFKSKINPDFVKANLGHSLLKHHRFSSLQVEDEKIKGGLKWVP-TKV   94 (449)
Q Consensus        22 ~~~~~~Ls~~d~~~l-----~~~~~~~-i~~~~~~~g~ld~~~l~~al~~~l~~~p~lr~~~~~~~~~~g~p~W~~-~~~   94 (449)
                      .+...|||+.|+.+|     .+....| +...++++|.+|.++|++|+...+.+||.||++|...   .|.++|+. ++.
T Consensus        93 ~~~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~ld~~~l~~A~~~lv~rh~~LRt~f~~~---~~~~~q~v~~~~  169 (520)
T 2jgp_A           93 KQAYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGKLERTRVEAAFQRLIARHESLRTSFAVV---NGEPVQNIHEDV  169 (520)
T ss_dssp             CCSSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEECCCHHHHHHHHHHHHHHCGGGGEEEEEE---TTEEEEEECSCC
T ss_pred             CCCCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCCCCHHHHHHHHHHHHHHhHhheeEEEee---CCEEEEEECCCC
Confidence            456789999999987     3555555 6677899999999999999999999999999999874   57788776 554


Q ss_pred             CCcceeEeccCCCCCCCchHHHHHHHHHHHHhCCCCCCCCCceEEEEeeeeCCCCeEEEEEeeccccccCCcHHHHHHHh
Q 043866           95 NLDNHVIVPNLEPKSIDSADKFVEDYVSNLSKTGIKMSKQPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLVSLFLSC  174 (449)
Q Consensus        95 d~~~hv~~~~l~~~~~~~~~~~l~~~~~~~~~~pld~~~~PlW~~~li~~~~~~~~~~l~lr~HH~l~DG~s~~~ll~~l  174 (449)
                      ++...+.  ++       +++++.+ +.+...++||++++|+|++.+++.  +++++.+++.+||+++||+|+..++.++
T Consensus       170 ~~~~~~~--~~-------~~~~~~~-~~~~~~~~fdl~~~pl~r~~l~~~--~~~~~~l~~~~HH~i~Dg~S~~~l~~el  237 (520)
T 2jgp_A          170 PFALAYS--EV-------TEEEARE-LVSSLVQPFDLEVAPLIRVSLLKI--GEDRYVLFTDMHHSISDGVSSGILLAEW  237 (520)
T ss_dssp             CCCCEEE--EC-------CHHHHHH-HHHHTCCCCCTTSSCCEEEEEEEE--ETTEEEEEEEEBGGGCCHHHHHHHHHHH
T ss_pred             CCceEEE--eC-------CHHHHHH-HHHHhcCCCCCCCCcceeEEEEEE--cCCcEEEEEEccceeecHhHHHHHHHHH
Confidence            4433322  22       2445555 667788999999889999999985  3578999999999999999999999999


Q ss_pred             ccccCCCCCCCCCCCCCCCCCCCCCccCccCcchhhHHHHHHHH--------HHHHHHHHHHHHHHHHHHhcccCCCCC-
Q 043866          175 TRKVSNPEELPSNSIPPTSKEGDSRSYGIKGFWPYLSFKYFWFV--------FSLFYNTLVDAVMVIATILMFVKDSET-  245 (449)
Q Consensus       175 ~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~p~t-  245 (449)
                      ...|... ..+..    +             ..|.++..|....        ...+|...      +..     ..+.. 
T Consensus       238 ~~~Y~~~-~l~~~----~-------------~~~~d~~~~~~~~~~~~~~~~~~~yW~~~------l~~-----~~~~~~  288 (520)
T 2jgp_A          238 VQLYQGD-VLPEL----R-------------IQYKDFAVWQQEFSQSAAFHKQEAYWLQT------FAD-----DIPVLN  288 (520)
T ss_dssp             HHHHTTC-CCCCC----S-------------CCHHHHHHHHHHHTTSHHHHHHHHHHHHH------TSS-----CCCCCC
T ss_pred             HHHHccC-CCCCC----C-------------CCHHHHHHHHHHhhcChhhHHHHHHHHHH------hCC-----CCCcCC
Confidence            9887432 11110    0             1255666655432        12344321      111     01111 


Q ss_pred             -ccccCCCC-CCCCeEEEEEeeC---hHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhhchhhhhccccccccCCCCC
Q 043866          246 -PLKGIMGK-ASGPRRTVHRSLS---LDDFKNVKNAMNTTINDAVVAVTQAGLSRNLNRKYGELLLVNKGASERNNNLPK  320 (449)
Q Consensus       246 -~~~~~~~~-~~~~r~~~~~~~~---~~~vk~ia~~~g~TvNDvllAa~a~aL~r~~~~~~~~~~~~~~~~~~~~~~~p~  320 (449)
                       |...+... ...........++   .+.++++|+++|+|++++++||++.+|++|..+                     
T Consensus       289 lp~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~~~T~~~~l~aa~a~~L~~~~~~---------------------  347 (520)
T 2jgp_A          289 LPTDFTRPSTQSFAGDQCTIGAGKALTEGLHQLAQATGTTLYMVLLAAYNVLLAKYAGQ---------------------  347 (520)
T ss_dssp             CCCSSCCCSSCCCBEEEEEEECCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTC---------------------
T ss_pred             CCCCCCCCCCCCCCccEEEEeCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCC---------------------
Confidence             11111100 0001111223333   568999999999999999999999999999743                     


Q ss_pred             CceeEEEEEeeccCCchhhHHHHHHhcCCCCCCCceEEEEEeeeccCCCCCHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Q 043866          321 NIRLRAAIMKDLRSSGEVQELADIVKNGYKTKSGNKIGFVIFPFSIALRDDPLDYLREAKARMDRKKASLEAEFSYLLSQ  400 (449)
Q Consensus       321 ~~~l~~~vPvs~R~~~~~~~~~~~~~~~~~~~~gN~~~~~~~~Lp~~~~~d~~~rL~~v~~~~~~~k~~~~~~~~~~~~~  400 (449)
                       .++.+++|++.|...+.           +...|+.++.+.+++.++...++.+.|++|++.+..+......-+ ..+..
T Consensus       348 -~dv~~g~~~~gR~~~~~-----------~~~vG~f~n~lplr~~~~~~~~~~~~l~~v~~~~~~~~~h~~~p~-~~i~~  414 (520)
T 2jgp_A          348 -EDIIVGTPITGRSHADL-----------EPIVGMFVNTLAMRNKPQREKTFSEFLQEVKQNALDAYGHQDYPF-EELVE  414 (520)
T ss_dssp             -SCEEEEEEECCCCSGGG-----------TTCCSCCCEEEEEEECCCTTSBHHHHHHHHHHHHHHHHHTCCSCH-HHHHH
T ss_pred             -CCeEEEeccCCCCchhh-----------hccEEeeeeeeeEEecCCCCCCHHHHHHHHHHHHHHHHHhccCCH-HHHHH
Confidence             37999999999986543           357899999999999887456899999999999988877654221 12222


Q ss_pred             HHHhhhccc-cccCCCceeeeecCCCCccceeecCceeeEE
Q 043866          401 YTVKFGIKG-ANCPSKTTLLFSNVNGPQEEISFYGHPIAYV  440 (449)
Q Consensus       401 ~~~~~~~~~-~~~~~~~~~~~SNvpGp~~~l~l~G~~v~~~  440 (449)
                      .   ++... ......++.+++..+++.....++|..++.+
T Consensus       415 ~---l~~~r~~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~  452 (520)
T 2jgp_A          415 K---LAIARDLSRNPLFDTVFTFQNSTEEVMTLPECTLAPF  452 (520)
T ss_dssp             H---TCCCCCTTSCSSCSEEEEEECCCCSCCCCSSEEEEEC
T ss_pred             H---hcCCCCCCCCCcEEEEEEEecCCCccccCCCceeEEe
Confidence            2   22111 1111223445555555555566677665543

PyMOL of 2jgp

>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2	Back alignment and structure

>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2	Back alignment and structure

>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}	Back alignment and structure

>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}	Back alignment and structure

>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}	Back alignment and structure

>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*	Back alignment and structure

>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}	Back alignment and structure

>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A	Back alignment and structure

>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}	Back alignment and structure

>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*	Back alignment and structure

>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		449
d1l5aa1		174	c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 6	2e-04
d1q9ja1		175	c.43.1.2 (A:1-175) Polyketide synthase associated	0.003

>d1l5aa1 c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 666]} Length = 174	Back information, alignment and structure


class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: NRPS condensation domain (amide synthase)
domain: VibH
species: Vibrio cholerae [TaxId: 666]

 Score = 39.8 bits (92), Expect = 2e-04
 Identities = 20/136 (14%), Positives = 44/136 (32%), Gaps = 13/136 (9%)

Query: 37  EPESNLY-IVVMIGFKSKINPDFVKANLGHSLLKHHRFSSLQVEDEKIKGGLKWVPTKVN 95
            P  NL  +   +     ++   +   L  ++ +   F +         G L W P    
Sbjct: 15  YPHINLDTVAHSLRLTGPLDTTLLLRALHLTVSEIDLFRARFSAQ----GELYWHPFSPP 70

Query: 96  LDNHVIVPNLEPKSIDSADKFVEDYVSNLSKTGIKMSKQPMWDLHLLNIKTSDAESVAVL 155
           +D   +  +LE       +      +    +    +   P+    +   + S +E +   
Sbjct: 71  IDYQDLSIHLEA------EPLAWRQIEQDLQRSSTLIDAPITSHQV--YRLSHSEHLIYT 122

Query: 156 RVHHSLGDGTSLVSLF 171
           R HH + DG  ++   
Sbjct: 123 RAHHIVLDGYGMMLFE 138

PyMOL of d1l5aa1

>d1q9ja1 c.43.1.2 (A:1-175) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 175	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		449
d1l5aa1		174	VibH {Vibrio cholerae [TaxId: 666]}	99.68
d1q9ja1		175	Polyketide synthase associated protein 5, PapA5 {M	99.36
d1q9ja2		238	Polyketide synthase associated protein 5, PapA5 {M	98.62
d1l5aa2		250	VibH {Vibrio cholerae [TaxId: 666]}	97.64

>d1l5aa1 c.43.1.2 (A:1-174) VibH {Vibrio cholerae [TaxId: 666]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: CoA-dependent acyltransferases
superfamily: CoA-dependent acyltransferases
family: NRPS condensation domain (amide synthase)
domain: VibH
species: Vibrio cholerae [TaxId: 666]

Probab=99.68  E-value=3.4e-16  Score=138.22  Aligned_cols=139  Identities=14%  Similarity=0.207  Sum_probs=109.8

Q ss_pred             CChhhhccc-----CCCCCeE-EEEEEEecCCCCHHHHHHHHHHHhhhccccceeeeecccCCCeeEEeeeccCCcceeE
Q 043866           28 LSPMSRLFH-----EPESNLY-IVVMIGFKSKINPDFVKANLGHSLLKHHRFSSLQVEDEKIKGGLKWVPTKVNLDNHVI  101 (449)
Q Consensus        28 Ls~~d~~~l-----~~~~~~~-i~~~~~~~g~ld~~~l~~al~~~l~~~p~lr~~~~~~~~~~g~p~W~~~~~d~~~hv~  101 (449)
                      |+..|+.+|     .|+.+.| +...++++|++|.+.|++|+...+.+||.||++|...   .+ ..|......++.+..
T Consensus         1 ~~~aQ~~~W~~~~~~p~~~~yni~~~~~i~g~ld~~~l~~A~~~l~~rh~~LRt~f~~~---~~-~~~~~~~~~~~~~~~   76 (174)
T d1l5aa1           1 MLLAQKPFWQRHLAYPHINLDTVAHSLRLTGPLDTTLLLRALHLTVSEIDLFRARFSAQ---GE-LYWHPFSPPIDYQDL   76 (174)
T ss_dssp             CCGGGHHHHHHHHHSTTSCCSEEEEEEEEESSCCHHHHHHHHHHHHHTCGGGGEEECTT---CC-EEECSSCCCCEEEEC
T ss_pred             CCHHHHHHHHHHHcCCCCCeeeccEEEEEcCCCCHHHHHHHHHHHHHhCchheEEEecc---Cc-EEEEEEeeceeeEec
Confidence            677899988     5778888 7778899999999999999999999999999999874   33 344432222322211


Q ss_pred             eccCCCCCCCchHHHHHHHHHHHHhCCCCCCCCCceEEEEeeeeCCCCeEEEEEeeccccccCCcHHHHHHHhcccc
Q 043866          102 VPNLEPKSIDSADKFVEDYVSNLSKTGIKMSKQPMWDLHLLNIKTSDAESVAVLRVHHSLGDGTSLVSLFLSCTRKV  178 (449)
Q Consensus       102 ~~~l~~~~~~~~~~~l~~~~~~~~~~pld~~~~PlW~~~li~~~~~~~~~~l~lr~HH~l~DG~s~~~ll~~l~~~~  178 (449)
                        .. ...   .+.+..+.+.+...++||..++|++++.+++.  +++++.+++++||+++||+|+..++.++...|
T Consensus        77 --~~-~~~---~~~~~~~~~~~~~~~~~dl~~~pl~r~~l~~~--~~~~~~l~~~~hHii~Dg~S~~~l~~el~~~Y  145 (174)
T d1l5aa1          77 --SI-HLE---AEPLAWRQIEQDLQRSSTLIDAPITSHQVYRL--SHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHY  145 (174)
T ss_dssp             --TT-CTT---HHHHHHHHHHHHHTSCCCCBTSCSCEEEEEEE--ETTEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred             --cc-ccc---hHHHHHHHHHHHHhCCccccCCCcEEEEEEEe--CCCceEEeeecccEEEcHhHHHHHHHHHHHHH
Confidence              11 111   56667777888889999999999999999984  46789999999999999999999999998776

PyMOL of d1l5aa1

>d1q9ja1 c.43.1.2 (A:1-175) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

>d1q9ja2 c.43.1.2 (A:181-418) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

>d1l5aa2 c.43.1.2 (A:175-424) VibH {Vibrio cholerae [TaxId: 666]}	Back information, alignment and structure