Citrus Sinensis ID: 043981

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-
Protein Sequence
MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCIRQSNLN
Secondary Structure (PSIPRED)
ccEEEccccccccccccccccEEEcccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccHHHHHHHHcccccccccccccccccccHHHcHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccHHEEcccccccccccEEEEEcccccHHHHHcccEEEcccHEHEEEEEEEEEcccccccccccccccHHHHHHHHHccccEEEEcccccccccccccccHHHHHHHHHHHHHHHcccHcccccHHHHHHHcccccccccccccccEEEccccc
Coil and Loop (DISEMBL)
MVAHLSDFSIAklltgedqsmtQTQTLATIgymapeygregrvsangdvYSFGIMLMEtftgkkptdeiFNEEMTLKHWvndwlpistmEVVDvnllsqediHFVAKEQCVSFVFNLAMactvespeqrINAKEIVTKLLKIRDSLLRNvggrcirqsnln
Flexible Loop (DISEMBL)
MVAHLSDFSIAklltgedqsmtqTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMActvespeqrinAKEIVTKLLKIRDsllrnvggrcirqsnln
Low Complexity Region (SEG)
MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCIRQSNLN
Disordered region (IsUnstruct)
************************QTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI******
Disordered Region (DISOPRED)
MVAHLSDFSIAKLL************LATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR*************
Disordered Region (DISEMBL)
MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCIRQSNLN
Disordered Region (DISPRO)
**AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRNVGG**IR*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCIRQSNLN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	161	2.2.26 [Sep-21-2011]
C0LGP4	1010	Probable LRR receptor-lik	yes	no	0.913	0.145	0.389	5e-26
Q9SD62	1025	Putative receptor-like pr	no	no	0.925	0.145	0.380	2e-25
C0LGT6	1031	LRR receptor-like serine/	no	no	0.819	0.128	0.358	8e-19
Q9FIZ3	1252	LRR receptor-like serine/	no	no	0.869	0.111	0.342	4e-18
C0LGQ5	1249	LRR receptor-like serine/	no	no	0.875	0.112	0.346	1e-17
Q9SYM9	355	Receptor-like serine/thre	no	no	0.875	0.397	0.390	1e-16
Q9LVI6	647	Probable inactive recepto	no	no	0.857	0.213	0.354	4e-16
Q9FL28	1173	LRR receptor-like serine/	no	no	0.869	0.119	0.34	5e-16
Q9LP77	655	Probable inactive recepto	no	no	0.795	0.195	0.353	9e-16
C0LGW6	966	LRR receptor-like serine/	no	no	0.832	0.138	0.365	1e-15

>sp|C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1

 Score =  116 bits (291), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 60/154 (38%), Positives = 90/154 (58%), Gaps = 7/154 (4%)

Query: 1    MVAHLSDFSIAKLLTGEDQ-----SMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
            + AH+SDF +A+LL   D+      ++      TIGY APEYG  G+ S NGDVYSFGI+
Sbjct: 851  LTAHVSDFGLARLLLKFDEESFFNQLSSAGVRGTIGYAAPEYGVGGQPSINGDVYSFGIL 910

Query: 56   LMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLS-QEDIHFVAKEQCVSFV 114
            L+E FTGK+PT+E+F    TL  +    LP   +++VD ++L     + F   E C++ V
Sbjct: 911  LLEMFTGKRPTNELFGGNFTLNSYTKSALPERILDIVDESILHIGLRVGFPVVE-CLTMV 969

Query: 115  FNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR 148
            F + + C  ESP  R+    +V +L+ IR+   +
Sbjct: 970  FEVGLRCCEESPMNRLATSIVVKELISIRERFFK 1003

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9SD62|Y3471_ARATH Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana GN=At3g47110 PE=3 SV=1

 Score =  114 bits (286), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 90/155 (58%), Gaps = 6/155 (3%)

Query: 1    MVAHLSDFSIAKLLTGEDQSMTQTQ-----TLATIGYMAPEYGREGRVSANGDVYSFGIM 55
            + AH+SDF +A+LL   D+     Q        TIGY APEYG  G  S  GDVYSFGI+
Sbjct: 868  LTAHVSDFGLAQLLLKFDRDTFHIQFSSAGVRGTIGYAAPEYGMGGHPSIMGDVYSFGIV 927

Query: 56   LMETFTGKKPTDEIFNEEMTLKHWVNDWL-PISTMEVVDVNLLSQEDIHFVAKEQCVSFV 114
            L+E FTGK+PT+++F + +TL  +    L     +++ D  +L           +C++ V
Sbjct: 928  LLEIFTGKRPTNKLFVDGLTLHSFTKSALQKRQALDITDETILRGAYAQHFNMVECLTLV 987

Query: 115  FNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRN 149
            F + ++C+ ESP  RI+  E ++KL+ IR+S  R+
Sbjct: 988  FRVGVSCSEESPVNRISMAEAISKLVSIRESFFRD 1022

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGT6|EFR_ARATH LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1

 Score = 92.8 bits (229), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 74/148 (50%), Gaps = 16/148 (10%)

Query: 1   MVAHLSDFSIAKLLTGEDQ-----SMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
           + AH+SDF +A+LL   D+       +      TIGY APEYG  G+ S  GDVYSFGI+
Sbjct: 861 LTAHVSDFGLAQLLYKYDRESFLNQFSSAGVRGTIGYAAPEYGMGGQPSIQGDVYSFGIL 920

Query: 56  LMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVF 115
           L+E F+GKKPTDE F  +  L  +    L   T                 A ++ +  V 
Sbjct: 921 LLEMFSGKKPTDESFAGDYNLHSYTKSILSGCTSSGGS-----------NAIDEGLRLVL 969

Query: 116 NLAMACTVESPEQRINAKEIVTKLLKIR 143
            + + C+ E P  R+   E V +L+ IR
Sbjct: 970 QVGIKCSEEYPRDRMRTDEAVRELISIR 997

Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of elongation factor Tu (EF-Tu), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Reduces transformation by Rhizobium radiobacter probably by inducing plant defense during the interaction. Binding to the effector AvrPto1 from P.syringae blocks the downstream plant immune response.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FIZ3|GSO2_ARATH LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2

 Score = 90.5 bits (223), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 78/143 (54%), Gaps = 3/143 (2%)

Query: 3    AHLSDFSIAKLLTGEDQSMTQTQTL--ATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            AHL DF +AK+LTG   + T++ T+   + GY+APEY    + +   DVYS GI+LME  
Sbjct: 1093 AHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIV 1152

Query: 61   TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF-VFNLAM 119
            TGK PT+ +F+EE  +  WV   L           L+  E    +  E+  ++ V  +A+
Sbjct: 1153 TGKMPTEAMFDEETDMVRWVETVLDTPPGSEAREKLIDSELKSLLPCEEEAAYQVLEIAL 1212

Query: 120  ACTVESPEQRINAKEIVTKLLKI 142
             CT   P++R ++++    LL +
Sbjct: 1213 QCTKSYPQERPSSRQASEYLLNV 1235

Together with GSO1, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Involved in the nuclear division phase of megagametogenesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1

 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 81/150 (54%), Gaps = 9/150 (6%)

Query: 1    MVAHLSDFSIAKLLTGEDQSMTQTQT--LATIGYMAPEYGREGRVSANGDVYSFGIMLME 58
            M AHL DF +AK+LT    + T + T    + GY+APEY    + +   DVYS GI+LME
Sbjct: 1096 MEAHLGDFGLAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLME 1155

Query: 59   TFTGKKPTDEIFNEEMTLKHWVNDWLPISTM---EVVDVNLLSQEDIHFVAKEQCVSFVF 115
              TGK PTD +F  EM +  WV   L ++     +++D  L  +  + F     C   V 
Sbjct: 1156 IVTGKMPTDSVFGAEMDMVRWVETHLEVAGSARDKLIDPKL--KPLLPFEEDAACQ--VL 1211

Query: 116  NLAMACTVESPEQRINAKEIVTKLLKIRDS 145
             +A+ CT  SP++R ++++    LL + ++
Sbjct: 1212 EIALQCTKTSPQERPSSRQACDSLLHVYNN 1241

Together with GSO2, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SYM9|Y1853_ARATH Receptor-like serine/threonine-protein kinase At1g78530 OS=Arabidopsis thaliana GN=At1g78530 PE=2 SV=1

 Score = 85.9 bits (211), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 78/146 (53%), Gaps = 5/146 (3%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           M A +SDF +A L+   D++   T    T GY+APEY   G+ +  GDVYSFG++L+E  
Sbjct: 209 MEARVSDFGLATLME-PDKTHVSTFVAGTFGYLAPEYFDTGKATMKGDVYSFGVVLLELL 267

Query: 61  TGKKPTDEIFNEEMT-LKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           TG+KPTD+ F EE T L  WV   +     EVV  N L       V + + ++ VF +AM
Sbjct: 268 TGRKPTDDEFFEEGTKLVTWVKGVVRDQREEVVIDNRLRGSS---VQENEEMNDVFGIAM 324

Query: 120 ACTVESPEQRINAKEIVTKLLKIRDS 145
            C    P  R    E+V  L  I+ S
Sbjct: 325 MCLEPEPAIRPAMTEVVKLLEYIKLS 350

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LVI6|RLK90_ARATH Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1

 Score = 84.0 bits (206), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 84/155 (54%), Gaps = 17/155 (10%)

Query: 3   AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
           A +SDF +A+L+     S + T      GY APE     RVS   DVYSFG++L+E  TG
Sbjct: 504 ARVSDFGLAQLV-----SASSTTPNRATGYRAPEVTDPRRVSQKADVYSFGVVLLELLTG 558

Query: 63  KKPTDEIFNEE-MTLKHWVN-----DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFN 116
           K P++ + NEE M L  WV+     +W      EV D  L+S E +  V+ E+ ++ +  
Sbjct: 559 KAPSNSVMNEEGMDLARWVHSVAREEW----RNEVFDSELMSIETV--VSVEEEMAEMLQ 612

Query: 117 LAMACTVESPEQRINAKEIVTKLLKIRDSLLRNVG 151
           L + CT + P++R    E+V ++ ++R S    VG
Sbjct: 613 LGIDCTEQHPDKRPVMVEVVRRIQELRQSGADRVG 647

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FL28|FLS2_ARATH LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1

 Score = 83.6 bits (205), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 84/150 (56%), Gaps = 10/150 (6%)

Query: 2    VAHLSDFSIAKLLTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGIMLME 58
            VAH+SDF  A++L   +   T   T A   TIGY+APE+    +V+   DV+SFGI++ME
Sbjct: 1010 VAHVSDFGTARILGFREDGSTTASTSAFEGTIGYLAPEFAYMRKVTTKADVFSFGIIMME 1069

Query: 59   TFTGKKPT--DEIFNEEMTLKHWVNDWLP---ISTMEVVDVNLLSQEDIHFVAKEQCVSF 113
              T ++PT  ++  +++MTL+  V   +       + V+D+ L   + I  + +E+ +  
Sbjct: 1070 LMTKQRPTSLNDEDSQDMTLRQLVEKSIGNGRKGMVRVLDMEL--GDSIVSLKQEEAIED 1127

Query: 114  VFNLAMACTVESPEQRINAKEIVTKLLKIR 143
               L + CT   PE R +  EI+T L+K+R
Sbjct: 1128 FLKLCLFCTSSRPEDRPDMNEILTHLMKLR 1157

Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of flagellin (flg22), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Flagellin-binding to the receptor is the first step to initiate the innate immune MAP kinase signaling cascade (MEKK1, MKK4/MKK5 and MPK3/MPK6), resulting in enhanced resistance against pathogens. Binding to the effector AvrPto1 from Pseudomonas syringae blocks the downstream plant immune response.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LP77|Y1848_ARATH Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1

 Score = 82.8 bits (203), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 19/147 (12%)

Query: 3   AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
           A +SDF +A+L+       + T      GY APE     RVS  GDVYSFG++L+E  TG
Sbjct: 510 AKVSDFGLAQLV-----GSSATNPNRATGYRAPEVTDPKRVSQKGDVYSFGVVLLELITG 564

Query: 63  KKPTDEIFNEE-MTLKHWV-----NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFN 116
           K P++ + NEE + L  WV     ++W      EV D  LLS        +E+ ++ +  
Sbjct: 565 KAPSNSVMNEEGVDLPRWVKSVARDEW----RREVFDSELLSLA----TDEEEMMAEMVQ 616

Query: 117 LAMACTVESPEQRINAKEIVTKLLKIR 143
           L + CT + P+QR    E+V K+  +R
Sbjct: 617 LGLECTSQHPDQRPEMSEVVRKMENLR 643

Arabidopsis thaliana (taxid: 3702)

>sp|C0LGW6|ERL1_ARATH LRR receptor-like serine/threonine-protein kinase ERL1 OS=Arabidopsis thaliana GN=ERL1 PE=2 SV=1

 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 75/145 (51%), Gaps = 11/145 (7%)

Query: 3   AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
           AHLSDF IAK +    ++   T  L TIGY+ PEY R  R++   D+YSFGI+L+E  TG
Sbjct: 787 AHLSDFGIAKSIPAS-KTHASTYVLGTIGYIDPEYARTSRINEKSDIYSFGIVLLELLTG 845

Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNL-LSQEDIHFVAKEQCVSFVFNLAMAC 121
           KK  D   N    +    +D    + ME VD  + ++  D+  + K       F LA+ C
Sbjct: 846 KKAVDNEANLHQLILSKADDN---TVMEAVDPEVTVTCMDLGHIRK------TFQLALLC 896

Query: 122 TVESPEQRINAKEIVTKLLKIRDSL 146
           T  +P +R    E+   LL +  SL
Sbjct: 897 TKRNPLERPTMLEVSRVLLSLVPSL 921

Receptor kinase that regulates inflorescence architecture and organ shape as well as stomatal patterning, including density and clustering, together with ER and ERL2.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	161
359483198	1087	PREDICTED: probable LRR receptor-like se	0.869	0.128	0.595	1e-42
359485176	1160	PREDICTED: probable LRR receptor-like se	0.900	0.125	0.605	2e-41
224116832	1061	predicted protein [Populus trichocarpa]	0.875	0.132	0.573	1e-40
359485453	1202	PREDICTED: probable LRR receptor-like se	0.894	0.119	0.568	1e-40
302143440	929	unnamed protein product [Vitis vinifera]	0.900	0.156	0.585	2e-40
359485451	1454	PREDICTED: LRR receptor-like serine/thre	0.900	0.099	0.585	2e-40
255572272	1089	serine-threonine protein kinase, plant-t	0.925	0.136	0.533	6e-40
147843440	868	hypothetical protein VITISV_043680 [Viti	0.869	0.161	0.591	2e-39
147855067	646	hypothetical protein VITISV_024048 [Viti	0.894	0.222	0.575	8e-39
147853795	1420	hypothetical protein VITISV_005816 [Viti	0.900	0.102	0.557	1e-38

>gi|359483198|ref|XP_002271405.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Vitis vinifera]

 Score =  177 bits (449), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 84/141 (59%), Positives = 109/141 (77%), Gaps = 1/141 (0%)

Query: 3    AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
             H+ DF IAKLL  E++S+ +TQTLATIGYMAP+Y   G V+ +GDVYS+GI+LMETFT 
Sbjct: 943  GHVGDFGIAKLLR-EEESIRETQTLATIGYMAPKYVSNGIVTTSGDVYSYGIVLMETFTR 1001

Query: 63   KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
            ++PTDEIF+EEM++K+WV DWL  S  EVVD NLL  ED  F+AK+QC+S +  LAM C 
Sbjct: 1002 RRPTDEIFSEEMSMKNWVWDWLCGSITEVVDANLLRGEDEQFMAKKQCISLILGLAMDCV 1061

Query: 123  VESPEQRINAKEIVTKLLKIR 143
             +SPE+RI  K++VT L KI+
Sbjct: 1062 ADSPEERIKMKDVVTTLKKIK 1082

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485176|ref|XP_002280075.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Vitis vinifera]

 Score =  173 bits (439), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 89/147 (60%), Positives = 106/147 (72%), Gaps = 2/147 (1%)

Query: 1    MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            MVA L DF I+KLLT E +SM QT+TL TIGYMAPEYG EG VS  GDVYS+GIM+METF
Sbjct: 1014 MVARLGDFGISKLLT-ETESMEQTRTLGTIGYMAPEYGSEGIVSTRGDVYSYGIMMMETF 1072

Query: 61   TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
              KKPTDE+F  E+TL+ WV + L    MEVVD NL+ +ED HF  KE C+  +  LA+ 
Sbjct: 1073 ARKKPTDEMFGGEVTLRSWV-ESLAGRVMEVVDGNLVRREDQHFGIKESCLRSIMALALE 1131

Query: 121  CTVESPEQRINAKEIVTKLLKIRDSLL 147
            CT ESP  RI+ KE+V +L KIR  LL
Sbjct: 1132 CTTESPRDRIDMKEVVVRLKKIRIKLL 1158

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116832|ref|XP_002317405.1| predicted protein [Populus trichocarpa] gi|222860470|gb|EEE98017.1| predicted protein [Populus trichocarpa]

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 82/143 (57%), Positives = 109/143 (76%), Gaps = 2/143 (1%)

Query: 1    MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            MVAH+SDF I++LL GE  ++TQT TLATIGYMAPEYG EG VS  GDVYS+GI LMETF
Sbjct: 906  MVAHVSDFGISRLL-GEGDAVTQTLTLATIGYMAPEYGLEGIVSVKGDVYSYGIFLMETF 964

Query: 61   TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            T KKPTD++F  EM+LK+WV   LP +  EV+D NLL +E+ HFVAK+ C++ + NLA+ 
Sbjct: 965  TRKKPTDDMFGGEMSLKNWVKQSLPKAITEVIDANLLIEEE-HFVAKKDCITSILNLALE 1023

Query: 121  CTVESPEQRINAKEIVTKLLKIR 143
            C+ + P +RI  ++++  L KI+
Sbjct: 1024 CSADLPGERICMRDVLPALEKIK 1046

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485453|ref|XP_003633276.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Vitis vinifera]

 Score =  171 bits (432), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 83/146 (56%), Positives = 106/146 (72%), Gaps = 2/146 (1%)

Query: 1    MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            MVAH+SDF IAKLL G  + M +T+TL T+GYMAPEYG EG VS  GD+YS+GI+LMETF
Sbjct: 1053 MVAHISDFGIAKLLMGS-EFMKRTKTLGTVGYMAPEYGSEGIVSTKGDIYSYGILLMETF 1111

Query: 61   TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
              KKPTDE+F EE+TLK WV      + MEV+D NLL++ED  F  K  C S +  LA+ 
Sbjct: 1112 VRKKPTDEMFVEELTLKSWVESSTN-NIMEVIDANLLTEEDESFALKRACFSSIMTLALD 1170

Query: 121  CTVESPEQRINAKEIVTKLLKIRDSL 146
            CTVE PE+RIN K++V +L K+ + +
Sbjct: 1171 CTVEPPEKRINTKDVVVRLKKLLNQI 1196

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143440|emb|CBI22001.3| unnamed protein product [Vitis vinifera]

 Score =  170 bits (430), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/147 (58%), Positives = 108/147 (73%), Gaps = 2/147 (1%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           MVAH+ DF IA+LLT E +SM QT+TL TIGYMAPEYG +G VS  GDV+S+GIMLME F
Sbjct: 784 MVAHVGDFGIARLLT-ETESMQQTKTLGTIGYMAPEYGSDGIVSTKGDVFSYGIMLMEVF 842

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
             KKP DE+FN ++TLK WV + L  S +EVVD NLL +ED  F  K  C+S +  LA+A
Sbjct: 843 ARKKPMDEMFNGDLTLKSWV-ESLADSMIEVVDANLLRREDEDFATKLSCLSSIMALALA 901

Query: 121 CTVESPEQRINAKEIVTKLLKIRDSLL 147
           CT +SPE+RI+ K++V  L KI+  LL
Sbjct: 902 CTTDSPEERIDMKDVVVGLKKIKIELL 928

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485451|ref|XP_002276944.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2-like [Vitis vinifera]

 Score =  169 bits (429), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 86/147 (58%), Positives = 107/147 (72%), Gaps = 2/147 (1%)

Query: 1    MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            MVAH+ DF IA+LLT E +SM QT+TL TIGYMAPEYG +G VS  GDV+S+GIMLME F
Sbjct: 1309 MVAHVGDFGIARLLT-ETESMQQTKTLGTIGYMAPEYGSDGIVSTKGDVFSYGIMLMEVF 1367

Query: 61   TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
              KKP DE+FN ++TLK WV   L  S +EVVD NLL +ED  F  K  C+S +  LA+A
Sbjct: 1368 ARKKPMDEMFNGDLTLKSWVES-LADSMIEVVDANLLRREDEDFATKLSCLSSIMALALA 1426

Query: 121  CTVESPEQRINAKEIVTKLLKIRDSLL 147
            CT +SPE+RI+ K++V  L KI+  LL
Sbjct: 1427 CTTDSPEERIDMKDVVVGLKKIKIELL 1453

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572272|ref|XP_002527075.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223533580|gb|EEF35319.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  168 bits (426), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 80/150 (53%), Positives = 106/150 (70%), Gaps = 1/150 (0%)

Query: 1    MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            MVA L+DF I+KLL GE+ S+ QT TLATIGYMAPEYG EG VS  GDVYS+G++LMETF
Sbjct: 937  MVAFLADFGISKLL-GEEGSVMQTMTLATIGYMAPEYGSEGIVSVRGDVYSYGVLLMETF 995

Query: 61   TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            T KKPTD++F E+++LK WV   L     +V+D NLL  E+ H  AK+ C+  +  LA+ 
Sbjct: 996  TQKKPTDKMFTEQLSLKSWVEQSLSCEVTQVIDANLLGIEEDHLAAKKDCIVSILKLALQ 1055

Query: 121  CTVESPEQRINAKEIVTKLLKIRDSLLRNV 150
            C+ + P  RI+ K +VT L KI+   LR++
Sbjct: 1056 CSADLPHDRIDMKHVVTTLQKIKTKFLRDI 1085

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147843440|emb|CAN79970.1| hypothetical protein VITISV_043680 [Vitis vinifera]

 Score =  167 bits (422), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 84/142 (59%), Positives = 104/142 (73%), Gaps = 2/142 (1%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           MVAH+SDF IAKLL G ++ M +T+TL TIGYMAPEYG EG VS  GD+YS+ IMLMETF
Sbjct: 700 MVAHISDFGIAKLLMG-NEFMKRTKTLGTIGYMAPEYGSEGIVSTKGDIYSYRIMLMETF 758

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
             KKPTDE+F EE+TLK WV      + MEV+DVNLL +ED +F  K+ C S +  LA  
Sbjct: 759 VRKKPTDEMFMEELTLKSWVESSTN-NIMEVIDVNLLIEEDENFALKQACFSSIRTLASD 817

Query: 121 CTVESPEQRINAKEIVTKLLKI 142
           CT E P++RIN K++V +L KI
Sbjct: 818 CTAEPPQKRINMKDVVVRLKKI 839

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147855067|emb|CAN82376.1| hypothetical protein VITISV_024048 [Vitis vinifera]

 Score =  164 bits (416), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 84/146 (57%), Positives = 104/146 (71%), Gaps = 2/146 (1%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           MVAH+SDF IAKLL G    M +T+TL TIGYMAPEYG EG VS  GD+YS+GIMLMETF
Sbjct: 478 MVAHISDFGIAKLLMG-SVFMKRTKTLGTIGYMAPEYGSEGIVSTKGDIYSYGIMLMETF 536

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
             KKPTDE+F EE+TLK WV      + MEV+DV+LL +ED     +  C S +  LA+ 
Sbjct: 537 VRKKPTDEMFMEELTLKSWVESSAN-NIMEVIDVDLLIEEDEKISLRPACFSSIITLALD 595

Query: 121 CTVESPEQRINAKEIVTKLLKIRDSL 146
           CTVE PE+RIN K++V +L KI + +
Sbjct: 596 CTVEPPEKRINMKDVVVRLKKILNQI 621

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147853795|emb|CAN81714.1| hypothetical protein VITISV_005816 [Vitis vinifera]

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 82/147 (55%), Positives = 105/147 (71%), Gaps = 2/147 (1%)

Query: 1    MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            MVAH+SDF IAKLL G  + M +T+TL TIGYMAPEYG EG VS   D YS+GI+LME F
Sbjct: 1054 MVAHISDFGIAKLLMGS-EFMKRTKTLGTIGYMAPEYGSEGIVSTKCDTYSYGIILMEIF 1112

Query: 61   TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
              KKPTDE+F EE+TLK WV      + MEV+D NLL++ED  F  K+ C S +  LA+ 
Sbjct: 1113 VRKKPTDEMFVEELTLKSWVESSAN-NIMEVIDANLLTEEDESFALKQACFSSIMTLALD 1171

Query: 121  CTVESPEQRINAKEIVTKLLKIRDSLL 147
            CT+E PE+RIN K++V +L KI + ++
Sbjct: 1172 CTIEPPEKRINMKDVVARLKKILNQIV 1198

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	161
TAIR|locus:2079142	1010	AT3G47570 [Arabidopsis thalian	0.913	0.145	0.389	3e-23
TAIR|locus:2075661	1025	AT3G47110 [Arabidopsis thalian	0.925	0.145	0.380	1.7e-22
TAIR|locus:2079157	1011	AT3G47580 [Arabidopsis thalian	0.913	0.145	0.376	9.3e-22
TAIR|locus:2075631	1009	AT3G47090 [Arabidopsis thalian	0.913	0.145	0.363	1.2e-21
TAIR|locus:2203000	355	AT1G78530 [Arabidopsis thalian	0.844	0.383	0.401	1.3e-17
UNIPROTKB|Q40640	1025	Xa21 "Receptor kinase-like pro	0.900	0.141	0.333	2.9e-17
TAIR|locus:2170668	604	AT5G62710 [Arabidopsis thalian	0.795	0.211	0.395	5.4e-17
TAIR|locus:2120362	1249	GSO1 "GASSHO1" [Arabidopsis th	0.857	0.110	0.353	6.3e-17
TAIR|locus:2156349	1252	GSO2 "GASSHO 2" [Arabidopsis t	0.869	0.111	0.342	6.3e-17
TAIR|locus:2088500	647	RLK902 "receptor-like kinase 9	0.881	0.219	0.377	7.3e-16

TAIR|locus:2079142 AT3G47570 [Arabidopsis thaliana (taxid:3702)]

 Score = 280 (103.6 bits), Expect = 3.0e-23, P = 3.0e-23
 Identities = 60/154 (38%), Positives = 90/154 (58%)

Query:     1 MVAHLSDFSIAKLLTGEDQS-----MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
             + AH+SDF +A+LL   D+      ++      TIGY APEYG  G+ S NGDVYSFGI+
Sbjct:   851 LTAHVSDFGLARLLLKFDEESFFNQLSSAGVRGTIGYAAPEYGVGGQPSINGDVYSFGIL 910

Query:    56 LMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQE-DIHFVAKEQCVSFV 114
             L+E FTGK+PT+E+F    TL  +    LP   +++VD ++L     + F   E C++ V
Sbjct:   911 LLEMFTGKRPTNELFGGNFTLNSYTKSALPERILDIVDESILHIGLRVGFPVVE-CLTMV 969

Query:   115 FNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR 148
             F + + C  ESP  R+    +V +L+ IR+   +
Sbjct:   970 FEVGLRCCEESPMNRLATSIVVKELISIRERFFK 1003

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2075661 AT3G47110 [Arabidopsis thaliana (taxid:3702)]

 Score = 273 (101.2 bits), Expect = 1.7e-22, P = 1.7e-22
 Identities = 59/155 (38%), Positives = 90/155 (58%)

Query:     1 MVAHLSDFSIAKLLTGEDQSMTQTQ-----TLATIGYMAPEYGREGRVSANGDVYSFGIM 55
             + AH+SDF +A+LL   D+     Q        TIGY APEYG  G  S  GDVYSFGI+
Sbjct:   868 LTAHVSDFGLAQLLLKFDRDTFHIQFSSAGVRGTIGYAAPEYGMGGHPSIMGDVYSFGIV 927

Query:    56 LMETFTGKKPTDEIFNEEMTLKHWVNDWLPI-STMEVVDVNLLSQEDIHFVAKEQCVSFV 114
             L+E FTGK+PT+++F + +TL  +    L     +++ D  +L           +C++ V
Sbjct:   928 LLEIFTGKRPTNKLFVDGLTLHSFTKSALQKRQALDITDETILRGAYAQHFNMVECLTLV 987

Query:   115 FNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRN 149
             F + ++C+ ESP  RI+  E ++KL+ IR+S  R+
Sbjct:   988 FRVGVSCSEESPVNRISMAEAISKLVSIRESFFRD 1022

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2079157 AT3G47580 [Arabidopsis thaliana (taxid:3702)]

 Score = 266 (98.7 bits), Expect = 9.3e-22, P = 9.3e-22
 Identities = 58/154 (37%), Positives = 87/154 (56%)

Query:     1 MVAHLSDFSIAKLLTGEDQS--MTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGIM 55
             + AH+SDF +A+LL   D+   + Q  +     TIGY APEYG  G+ S +GDVYSFG++
Sbjct:   852 LTAHVSDFGLARLLLKFDKESFLNQLSSAGVRGTIGYAAPEYGMGGQPSIHGDVYSFGVL 911

Query:    56 LMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQE-DIHFVAKEQCVSFV 114
             L+E FTGK+PTDE+F   +TL  +    LP    E+ D  +L     + F   E C++ V
Sbjct:   912 LLEMFTGKRPTDELFGGNLTLHSYTKLALPEKVFEIADKAILHIGLRVGFRTAE-CLTLV 970

Query:   115 FNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR 148
               + + C  E P  R+   E+  +L+ IR+   +
Sbjct:   971 LEVGLRCCEEYPTNRLATSEVAKELISIRERFFK 1004

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2075631 AT3G47090 [Arabidopsis thaliana (taxid:3702)]

 Score = 265 (98.3 bits), Expect = 1.2e-21, P = 1.2e-21
 Identities = 56/154 (36%), Positives = 88/154 (57%)

Query:     1 MVAHLSDFSIAKLLTGEDQS-----MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
             + AH+SDF +A+LL   DQ      ++      TIGY APEYG  G+ S +GDVYSFG++
Sbjct:   850 LTAHVSDFGLARLLLKFDQESFFNQLSSAGVRGTIGYAAPEYGMGGQPSIHGDVYSFGVL 909

Query:    56 LMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL-SQEDIHFVAKEQCVSFV 114
             ++E FTGK+PT+E+F    TL  +    LP   +++ D ++L S   + F   E C+  +
Sbjct:   910 VLEMFTGKRPTNELFGGNFTLNSYTKAALPERVLDIADKSILHSGLRVGFPVLE-CLKGI 968

Query:   115 FNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR 148
              ++ + C  ESP  R+   E   +L+ IR+   +
Sbjct:   969 LDVGLRCCEESPLNRLATSEAAKELISIRERFFK 1002

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2203000 AT1G78530 [Arabidopsis thaliana (taxid:3702)]

 Score = 217 (81.4 bits), Expect = 1.3e-17, P = 1.3e-17
 Identities = 57/142 (40%), Positives = 78/142 (54%)

Query:     1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
             M A +SDF +A L+   D++   T    T GY+APEY   G+ +  GDVYSFG++L+E  
Sbjct:   209 MEARVSDFGLATLME-PDKTHVSTFVAGTFGYLAPEYFDTGKATMKGDVYSFGVVLLELL 267

Query:    61 TGKKPTDEIFNEEMT-LKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
             TG+KPTD+ F EE T L  WV   +     EVV  N L    +     E+ ++ VF +AM
Sbjct:   268 TGRKPTDDEFFEEGTKLVTWVKGVVRDQREEVVIDNRLRGSSVQ--ENEE-MNDVFGIAM 324

Query:   120 ACTVESPEQRINAKEIVTKLLK 141
              C    P  R    E+V KLL+
Sbjct:   325 MCLEPEPAIRPAMTEVV-KLLE 345

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

UNIPROTKB|Q40640 Xa21 "Receptor kinase-like protein" [Oryza sativa (taxid:4530)]

 Score = 224 (83.9 bits), Expect = 2.9e-17, P = 2.9e-17
 Identities = 53/159 (33%), Positives = 88/159 (55%)

Query:     1 MVAHLSDFSIAKLLTGEDQSMTQTQT-----LATIGYMAPEYGREGRVSANGDVYSFGIM 55
             MVAH+ DF +A++L  +  S+ Q  T     + TIGY APEYG     S +GD+YS+GI+
Sbjct:   854 MVAHVGDFGLARILV-DGTSLIQQSTSSMGFIGTIGYAAPEYGVGLIASTHGDIYSYGIL 912

Query:    56 LMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL--SQEDIHFVAKE----- 108
             ++E  TGK+PTD  F  ++ L+ +V   L     +VVD  L+  S+  ++          
Sbjct:   913 VLEIVTGKRPTDSTFRPDLGLRQYVELGLHGRVTDVVDTKLILDSENWLNSTNNSPCRRI 972

Query:   109 -QCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL 146
              +C+ ++  L ++C+ E P  R    +I+ +L  I+ +L
Sbjct:   973 TECIVWLLRLGLSCSQELPSSRTPTGDIIDELNAIKQNL 1011

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2170668 AT5G62710 [Arabidopsis thaliana (taxid:3702)]

 Score = 218 (81.8 bits), Expect = 5.4e-17, P = 5.4e-17
 Identities = 55/139 (39%), Positives = 79/139 (56%)

Query:     5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
             +SDF +AKLL  ED  +T T    T GY+APEY + GR +   DVYSFG++L+E  TGK+
Sbjct:   454 VSDFGLAKLLVDEDAHVT-TVVAGTFGYLAPEYLQNGRATEKSDVYSFGVLLLELVTGKR 512

Query:    65 PTDEIFNEE-MTLKHWVNDWLPISTME-VVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
             PTD IF +  + +  W+N  L  + +E V+D       D+     E+ V  +  +A  CT
Sbjct:   513 PTDPIFVKRGLNVVGWMNTVLKENRLEDVIDKRCT---DVD----EESVEALLEIAERCT 565

Query:   123 VESPEQRINAKEIVTKLLK 141
               +PE R  A   V +LL+
Sbjct:   566 DANPENR-PAMNQVAQLLE 583

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009887 "organ morphogenesis" evidence=RCA

GO:0010051 "xylem and phloem pattern formation" evidence=RCA

GO:0048439 "flower morphogenesis" evidence=RCA

GO:0048519 "negative regulation of biological process" evidence=RCA

TAIR|locus:2120362 GSO1 "GASSHO1" [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 6.3e-17, P = 6.3e-17
 Identities = 52/147 (35%), Positives = 80/147 (54%)

Query:     1 MVAHLSDFSIAKLLTGEDQSMTQTQT--LATIGYMAPEYGREGRVSANGDVYSFGIMLME 58
             M AHL DF +AK+LT    + T + T    + GY+APEY    + +   DVYS GI+LME
Sbjct:  1096 MEAHLGDFGLAKVLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLME 1155

Query:    59 TFTGKKPTDEIFNEEMTLKHWVNDWLPISTM---EVVDVNLLSQEDIHFVAKEQCVSFVF 115
               TGK PTD +F  EM +  WV   L ++     +++D  L  +  + F  +E     V 
Sbjct:  1156 IVTGKMPTDSVFGAEMDMVRWVETHLEVAGSARDKLIDPKL--KPLLPF--EEDAACQVL 1211

Query:   116 NLAMACTVESPEQRINAKEIVTKLLKI 142
              +A+ CT  SP++R ++++    LL +
Sbjct:  1212 EIALQCTKTSPQERPSSRQACDSLLHV 1238

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0008544 "epidermis development" evidence=IGI

GO:0009790 "embryo development" evidence=IGI

TAIR|locus:2156349 GSO2 "GASSHO 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 6.3e-17, P = 6.3e-17
 Identities = 49/143 (34%), Positives = 78/143 (54%)

Query:     3 AHLSDFSIAKLLTGEDQSMTQTQTL--ATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
             AHL DF +AK+LTG   + T++ T+   + GY+APEY    + +   DVYS GI+LME  
Sbjct:  1093 AHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIV 1152

Query:    61 TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF-VFNLAM 119
             TGK PT+ +F+EE  +  WV   L           L+  E    +  E+  ++ V  +A+
Sbjct:  1153 TGKMPTEAMFDEETDMVRWVETVLDTPPGSEAREKLIDSELKSLLPCEEEAAYQVLEIAL 1212

Query:   120 ACTVESPEQRINAKEIVTKLLKI 142
              CT   P++R ++++    LL +
Sbjct:  1213 QCTKSYPQERPSSRQASEYLLNV 1235

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009553 "embryo sac development" evidence=IMP

GO:0008544 "epidermis development" evidence=IGI

GO:0009790 "embryo development" evidence=IGI

TAIR|locus:2088500 RLK902 "receptor-like kinase 902" [Arabidopsis thaliana (taxid:3702)]

 Score = 208 (78.3 bits), Expect = 7.3e-16, P = 7.3e-16
 Identities = 57/151 (37%), Positives = 85/151 (56%)

Query:     3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
             A +SDF +A+L++    S T T   AT GY APE     RVS   DVYSFG++L+E  TG
Sbjct:   504 ARVSDFGLAQLVSA---SST-TPNRAT-GYRAPEVTDPRRVSQKADVYSFGVVLLELLTG 558

Query:    63 KKPTDEIFNEE-MTLKHWVNDWLPISTM-EVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
             K P++ + NEE M L  WV+         EV D  L+S E +  V+ E+ ++ +  L + 
Sbjct:   559 KAPSNSVMNEEGMDLARWVHSVAREEWRNEVFDSELMSIETV--VSVEEEMAEMLQLGID 616

Query:   121 CTVESPEQRINAKEIVTKLLKIRDSLLRNVG 151
             CT + P++R    E+V ++ ++R S    VG
Sbjct:   617 CTEQHPDKRPVMVEVVRRIQELRQSGADRVG 647

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0009664 "plant-type cell wall organization" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0042545 "cell wall modification" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	161
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-11
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	5e-11
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-10
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	7e-10
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-09
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-09
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	1e-09
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-09
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	1e-08
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	1e-08
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	5e-08
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	8e-08
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	8e-08
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	1e-07
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	1e-07
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	7e-07
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	9e-07
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-06
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	1e-06
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	2e-06
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-06
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	4e-06
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	4e-06
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	4e-06
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	5e-06
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	6e-06
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	6e-06
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	6e-06
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	8e-06
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	1e-05
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	1e-05
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-05
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-05
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-05
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-05
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	3e-05
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	3e-05
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	6e-05
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	8e-05
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	9e-05
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	9e-05
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	1e-04
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	1e-04
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	1e-04
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-04
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	1e-04
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	1e-04
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	1e-04
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-04
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-04
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-04
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-04
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	3e-04
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	3e-04
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	3e-04
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	4e-04
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	5e-04
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	5e-04
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	5e-04
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	5e-04
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	5e-04
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	5e-04
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	5e-04
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	5e-04
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	5e-04
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	6e-04
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	6e-04
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	7e-04
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	0.001
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	0.001
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	0.001
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	0.001
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	0.001
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	0.001
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	0.001
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	0.001
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	0.002
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	0.002
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	0.002
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	0.002
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	0.002
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	0.002
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	0.002
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	0.002
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	0.003
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	0.003
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	0.003
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	0.003
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	0.003
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	0.003
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	0.004
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	0.004
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	0.004
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	0.004

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 60.5 bits (145), Expect = 2e-11
 Identities = 36/158 (22%), Positives = 55/158 (34%), Gaps = 21/158 (13%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLA----TIGYMAPEY---GREGRVSANGDVYSFGI 54
           V  L DF +AKLL     + +     +    T GYMAPE          S++ D++S GI
Sbjct: 140 VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGI 199

Query: 55  MLMETFTGKKP---TDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCV 111
            L E  TG  P            TLK  +    P     +   N            E   
Sbjct: 200 TLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSN-----------PELIS 248

Query: 112 SFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRN 149
               +L      + P+ R+++   ++  L     L  +
Sbjct: 249 KAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKES 286

Length = 384

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 58.7 bits (143), Expect = 5e-11
 Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 21/136 (15%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           +SDF +++ +  +D    +T     I +MAPE  ++G  ++  DV+SFG++L E FT G 
Sbjct: 146 ISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGA 205

Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
            P   + NEE+ L++            +     L +        E C   ++ L ++C  
Sbjct: 206 TPYPGLSNEEV-LEY------------LRKGYRLPK-------PEYCPDELYELMLSCWQ 245

Query: 124 ESPEQRINAKEIVTKL 139
             PE R    E+V +L
Sbjct: 246 LDPEDRPTFSELVERL 261

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 57.5 bits (140), Expect = 1e-10
 Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 24/136 (17%)

Query: 6   SDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKK 64
           SDF +++ L  +D    +      I +MAPE  +EG+ ++  DV+SFG++L E FT G++
Sbjct: 144 SDFGLSRDLY-DDDYYRKRGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQ 202

Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDV-NLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
           P   + NEE+              +E +     L Q          C   +++L + C  
Sbjct: 203 PYPGMSNEEV--------------LEYLKNGYRLPQP-------PNCPPELYDLMLQCWA 241

Query: 124 ESPEQRINAKEIVTKL 139
           E PE R    E+V  L
Sbjct: 242 EDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 55.2 bits (134), Expect = 7e-10
 Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 24/136 (17%)

Query: 6   SDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKK 64
           SDF +++ L  +D           I +MAPE  +EG+ ++  DV+SFG++L E FT G++
Sbjct: 145 SDFGLSRDLY-DDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEE 203

Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDV-NLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
           P   + N E+              +E +     L +          C   ++ L + C  
Sbjct: 204 PYPGMSNAEV--------------LEYLKKGYRLPKP-------PNCPPELYKLMLQCWA 242

Query: 124 ESPEQRINAKEIVTKL 139
           E PE R    E+V  L
Sbjct: 243 EDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 54.8 bits (133), Expect = 1e-09
 Identities = 30/131 (22%), Positives = 46/131 (35%), Gaps = 20/131 (15%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           L+DF +A+ L   ++  T   T     YMAPE           D++S G++L E  TGK 
Sbjct: 138 LADFGLARQLDPGEKLTTFVGTPE---YMAPEVLLGKGYGKAVDIWSLGVILYELLTGKP 194

Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
           P           K                   +S E    +   +    V +        
Sbjct: 195 PFPGDDQLLELFKKIGKP--KPPFPP--PEWDISPEAKDLI--RKL--LVKD-------- 238

Query: 125 SPEQRINAKEI 135
            PE+R+ A+E 
Sbjct: 239 -PEKRLTAEEA 248

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 54.8 bits (133), Expect = 1e-09
 Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 35/143 (24%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           +SDF +++ +  +D    +      I +MAPE  ++G+ ++  DV+SFG++L E FT G+
Sbjct: 143 ISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGE 202

Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCVSFVFN 116
           +P   + NEE+                           +  +         E C   ++ 
Sbjct: 203 QPYPGMSNEEV---------------------------LELLEDGYRLPRPENCPDELYE 235

Query: 117 LAMACTVESPEQRINAKEIVTKL 139
           L + C    PE R    E+V  L
Sbjct: 236 LMLQCWAYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 54.8 bits (132), Expect = 1e-09
 Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 21/142 (14%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           +V  + DF +++ +   D       T+  I +M PE     + +   DV+SFG++L E F
Sbjct: 159 LVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIF 218

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           T GK+P   + NEE+              +E +    L Q          C S V+++ +
Sbjct: 219 TYGKQPWYGLSNEEV--------------IECITQGRLLQR------PRTCPSEVYDIML 258

Query: 120 ACTVESPEQRINAKEIVTKLLK 141
            C    P+QRIN K+I  +L K
Sbjct: 259 GCWKRDPQQRINIKDIHERLQK 280

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 53.8 bits (130), Expect = 3e-09
 Identities = 37/151 (24%), Positives = 56/151 (37%), Gaps = 45/151 (29%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE-------YGREGRVSANGDVYSFG 53
            V  ++DF +AK L     S+T T    T  YMAPE       YG +       DV+S G
Sbjct: 135 GVVKIADFGLAKKLLKSSSSLT-TFV-GTPWYMAPEVLLGGNGYGPKV------DVWSLG 186

Query: 54  IMLMETFTGKKP--------TDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFV 105
           ++L E  TGK P          ++    +      ++    S          S+E    +
Sbjct: 187 VILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSS---------GSEEAKDLI 237

Query: 106 AKEQCVSFVFNLAMACTVESPEQRINAKEIV 136
            K             C  + P +R  A+EI+
Sbjct: 238 KK-------------CLNKDPSKRPTAEEIL 255

Length = 260

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 52.3 bits (125), Expect = 1e-08
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 21/136 (15%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           ++  + DF +++ +   D       T+  I +M PE     + +   DV+SFG++L E F
Sbjct: 160 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIF 219

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           T GK+P                 W  +S  EV++   ++Q  +       C   V+++ +
Sbjct: 220 TYGKQP-----------------WFQLSNTEVIEC--ITQGRV-LERPRVCPKEVYDIML 259

Query: 120 ACTVESPEQRINAKEI 135
            C    P+QR+N KEI
Sbjct: 260 GCWQREPQQRLNIKEI 275

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 52.5 bits (126), Expect = 1e-08
 Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 21/127 (16%)

Query: 22  TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW-- 79
           T T+   +  Y+APE      ++   D+Y FG++L+E  TGK P D  F    ++  W  
Sbjct: 834 TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWAR 893

Query: 80  -------VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA 132
                  ++ W  I      DV++   E +           V NLA+ CT   P  R  A
Sbjct: 894 YCYSDCHLDMW--IDPSIRGDVSVNQNEIVE----------VMNLALHCTATDPTARPCA 941

Query: 133 KEIVTKL 139
            +++  L
Sbjct: 942 NDVLKTL 948

Length = 968

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 50.3 bits (121), Expect = 5e-08
 Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 26/134 (19%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGK 63
           ++DF I+K+L   + ++ Q  T + T+ YM+PE  +    S   D++S G+ L+E   GK
Sbjct: 141 IADFGISKVL---ENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGK 197

Query: 64  KPTDEIFNEE---MTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            P   +   +     L   + D  P S          S E   F++             A
Sbjct: 198 FPF--LPPGQPSFFELMQAICDGPPPSLPA----EEFSPEFRDFIS-------------A 238

Query: 121 CTVESPEQRINAKE 134
           C  + P++R +A E
Sbjct: 239 CLQKDPKKRPSAAE 252

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 49.9 bits (120), Expect = 8e-08
 Identities = 37/142 (26%), Positives = 51/142 (35%), Gaps = 26/142 (18%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  L+DF  AK L   +          T  +MAPE  R        D++S G  ++E  T
Sbjct: 139 VVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMAT 198

Query: 62  GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDV--NLLSQEDIHFVAKEQCVSFVFNLAM 119
           GK P  E+ N    L         I +          LS+E   F+ K            
Sbjct: 199 GKPPWSELGNPMAALYK-------IGSSGEPPEIPEHLSEEAKDFLRK------------ 239

Query: 120 ACTVESPEQRINAKEIVTKLLK 141
            C    P++R  A E    LL+
Sbjct: 240 -CLRRDPKKRPTADE----LLQ 256

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 50.0 bits (119), Expect = 8e-08
 Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 21/136 (15%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           +SD  +++ +   D    Q ++L  I +M PE    G+ S++ D++SFG++L E F+ G 
Sbjct: 165 ISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGL 224

Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
           +P     N+E+              +E+V    L          E C   +++L   C  
Sbjct: 225 QPYYGFSNQEV--------------IEMVRKRQL------LPCSEDCPPRMYSLMTECWQ 264

Query: 124 ESPEQRINAKEIVTKL 139
           E P +R   K+I T+L
Sbjct: 265 EGPSRRPRFKDIHTRL 280

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 49.3 bits (118), Expect = 1e-07
 Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 26/139 (18%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           VA +SDF +AK     + S  Q      + + APE  RE + S   DV+SFGI+L E ++
Sbjct: 140 VAKVSDFGLAK-----EASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194

Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            G+ P   I  +++ + H    +     ME               A E C   V+ +   
Sbjct: 195 FGRVPYPRIPLKDV-VPHVEKGY----RME---------------APEGCPPEVYKVMKD 234

Query: 121 CTVESPEQRINAKEIVTKL 139
           C    P +R   K++  +L
Sbjct: 235 CWELDPAKRPTFKQLREQL 253

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 49.2 bits (117), Expect = 1e-07
 Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 21/142 (14%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           +V  + DF +++ +   D      +T+  I +M PE     + +   D++SFG++L E F
Sbjct: 159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIF 218

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           T GK+P                 W  +S  E ++     +E         C   V+ +  
Sbjct: 219 TYGKQP-----------------WYQLSNTEAIECITQGRE---LERPRTCPPEVYAIMQ 258

Query: 120 ACTVESPEQRINAKEIVTKLLK 141
            C    P+QR+  K+I ++L  
Sbjct: 259 GCWQREPQQRMVIKDIHSRLQA 280

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 46.8 bits (112), Expect = 7e-07
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR-EGRVSANGDVYSFGIMLME 58
           L+DF ++KLLT +   +       T  YMAPE    +G  S   D++S G++L E
Sbjct: 134 LADFGLSKLLTSDKSLLKTIV--GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYE 186

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 46.5 bits (111), Expect = 9e-07
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 3/63 (4%)

Query: 3   AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
            H++DF+IA  +T +  +   T T  T GYMAPE       S   D +S G+   E   G
Sbjct: 139 VHITDFNIATKVTPDTLT---TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRG 195

Query: 63  KKP 65
           K+P
Sbjct: 196 KRP 198

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 46.4 bits (111), Expect = 1e-06
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 9/75 (12%)

Query: 3   AHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
             L+DF +AK L+ E     +T T   T  Y+APE           D +S G++L E  T
Sbjct: 132 IKLTDFGLAKELSSEGS---RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLT 188

Query: 62  GKKP-----TDEIFN 71
           GK P       EI+ 
Sbjct: 189 GKPPFYAEDRKEIYE 203

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 46.3 bits (110), Expect = 1e-06
 Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 21/136 (15%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           +SDF +++ +   D    Q+++L  + +M PE    G+ +   D++SFG++L E F+ G 
Sbjct: 165 ISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGL 224

Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
           +P     N+E+              +E++      +        E C + V+ L + C  
Sbjct: 225 QPYYGFSNQEV--------------IEMI------RSRQLLPCPEDCPARVYALMIECWN 264

Query: 124 ESPEQRINAKEIVTKL 139
           E P +R   K+I T+L
Sbjct: 265 EIPARRPRFKDIHTRL 280

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 45.5 bits (108), Expect = 2e-06
 Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 20/116 (17%)

Query: 25  QTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWVNDW 83
             L  + ++APE  +E   S   DV+SFG+++ E FT G+ P   + +EE+         
Sbjct: 177 NALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEV--------- 227

Query: 84  LPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL 139
                     +N L    +     E C S ++ L   C   +P+ R +  E+V+ L
Sbjct: 228 ----------LNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSAL 273

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 45.5 bits (108), Expect = 2e-06
 Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 23/140 (16%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           +V  ++DF +A+L+  ++     +       + APE    G  S   DV+SFGI+L E F
Sbjct: 141 LVCKVADFGLARLI--KEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMF 198

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           T G+ P   + N E+  +      +P                       +C   ++ + +
Sbjct: 199 TYGQVPYPGMNNHEVYDQITAGYRMP--------------------CPAKCPQEIYKIML 238

Query: 120 ACTVESPEQRINAKEIVTKL 139
            C    PE R + K +  +L
Sbjct: 239 ECWAAEPEDRPSFKALREEL 258

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 44.9 bits (106), Expect = 4e-06
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 26/141 (18%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           VA +SDF +A++      SM    +   + + APE  +  + S+  DV+S+G++L E F+
Sbjct: 138 VAKVSDFGLARV-----GSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFS 192

Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            G+ P       +M+LK               +V    ++       E C + V+ L  +
Sbjct: 193 YGRAPY-----PKMSLK---------------EVKECVEKGYRMEPPEGCPADVYVLMTS 232

Query: 121 CTVESPEQRINAKEIVTKLLK 141
           C    P++R +  ++  KL K
Sbjct: 233 CWETEPKKRPSFHKLREKLEK 253

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 45.2 bits (107), Expect = 4e-06
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 5/66 (7%)

Query: 3   AHLSDFSIAKLLTGEDQSMTQTQTLAT--IG---YMAPEYGREGRVSANGDVYSFGIMLM 57
           A + DF I  LL G   +   T T  T  +G   Y APE  R   V+ N D+Y++G++ +
Sbjct: 121 AKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFL 180

Query: 58  ETFTGK 63
           E  TG+
Sbjct: 181 ECLTGQ 186

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 44.7 bits (106), Expect = 4e-06
 Identities = 33/140 (23%), Positives = 63/140 (45%), Gaps = 6/140 (4%)

Query: 5   LSDFSIAKLLTGEDQSMT-QTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGK 63
           +SDF +AK+L  +      +    + I + APE  R  + S+  DV+SFG+ L E FT  
Sbjct: 150 ISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYG 209

Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
            P+     E + +       + ++ +    + LL +E         C   V++L   C  
Sbjct: 210 DPSQSPPAEFLRMIGIAQGQMIVTRL----LELL-KEGERLPRPPSCPDEVYDLMKLCWE 264

Query: 124 ESPEQRINAKEIVTKLLKIR 143
             P+ R +  +++  + ++R
Sbjct: 265 AEPQDRPSFADLILIVDRLR 284

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 44.7 bits (106), Expect = 5e-06
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           ++DF +AKLL  +++          I +MA E       +   DV+S+G+ + E  T G 
Sbjct: 150 ITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGA 209

Query: 64  KPTDEI 69
           KP + I
Sbjct: 210 KPYEGI 215

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 44.3 bits (104), Expect = 6e-06
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 139 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 196

Query: 60  FT-GKKPTDEIFNEEM 74
            T G+ P   + N E+
Sbjct: 197 TTKGRVPYPGMVNREV 212

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 44.3 bits (104), Expect = 6e-06
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 139 LVCKIADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 196

Query: 60  FT-GKKPTDEIFNEEM 74
            T G+ P   + N E+
Sbjct: 197 VTKGRVPYPGMVNREV 212

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 44.2 bits (104), Expect = 6e-06
 Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 25/130 (19%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATI--GYMAPEYGREGRVSANGDVYSFGIMLMETFT- 61
           +SDF +++    ED     T  +  I   + APE    GR S+  DV+SFGI+L E F+ 
Sbjct: 135 ISDFGMSR--EEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSL 192

Query: 62  GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMAC 121
           G  P   + N++              T E +      ++ +     E C   V+ L   C
Sbjct: 193 GAVPYANLSNQQ--------------TREAI------EQGVRLPCPELCPDAVYRLMERC 232

Query: 122 TVESPEQRIN 131
               P QR +
Sbjct: 233 WEYDPGQRPS 242

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 43.9 bits (103), Expect = 8e-06
 Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 21/140 (15%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           ++  + DF +++ +   D       T+  I +M PE     + +   DV+S G++L E F
Sbjct: 157 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIF 216

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           T GK+P                 W  +S  EV++   ++Q  +       C   V++L +
Sbjct: 217 TYGKQP-----------------WYQLSNNEVIEC--ITQGRV-LQRPRTCPKEVYDLML 256

Query: 120 ACTVESPEQRINAKEIVTKL 139
            C    P  R+N KEI + L
Sbjct: 257 GCWQREPHMRLNIKEIHSLL 276

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 43.4 bits (102), Expect = 1e-05
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 6/69 (8%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           VA +SDF + K     + S TQ      + + APE  RE + S   DV+SFGI+L E ++
Sbjct: 140 VAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194

Query: 62  -GKKPTDEI 69
            G+ P   I
Sbjct: 195 FGRVPYPRI 203

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 43.5 bits (102), Expect = 1e-05
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 139 LVCKIADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 196

Query: 60  FT-GKKPTDEIFNEEM 74
            T G+ P   + N E+
Sbjct: 197 VTKGRVPYPGMNNREV 212

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 43.0 bits (101), Expect = 1e-05
 Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 2/74 (2%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  +SDF + + +  +DQ  + T T   + + +PE     + S+  DV+SFG+++ E F+
Sbjct: 138 VVKVSDFGMTRFVL-DDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFS 196

Query: 62  -GKKPTDEIFNEEM 74
            GK P +   N E+
Sbjct: 197 EGKTPYENRSNSEV 210

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 3/61 (4%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           L DF ++  L+      T    + T  +MAPE           D++S GI  +E   GK 
Sbjct: 139 LIDFGLSAQLSDTKARNT---MVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKP 195

Query: 65  P 65
           P
Sbjct: 196 P 196

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  ++DF +A+L+  +D+   +      I + APE    GR +   DV+SFGI+L E  T
Sbjct: 141 VCKIADFGLARLIE-DDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVT 199

Query: 62  -GKKP 65
            G+ P
Sbjct: 200 YGRVP 204

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 42.5 bits (100), Expect = 3e-05
 Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 4/70 (5%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR--VSANGDVYSFGIMLMET 59
           V  +SDF  +K L G +   T+T T  T+ YMAPE   +G     A  D++S G  ++E 
Sbjct: 147 VVKISDFGTSKRLAGIN-PCTETFT-GTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEM 204

Query: 60  FTGKKPTDEI 69
            TGK P  E+
Sbjct: 205 ATGKPPFIEL 214

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 42.4 bits (100), Expect = 3e-05
 Identities = 40/141 (28%), Positives = 60/141 (42%), Gaps = 28/141 (19%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGY-MAPEYGREGRV-SANGDVYSFGIMLMETFTG 62
           L DF +A LL    Q+ ++  T     Y MAPE   EG+      D++S GI + E  TG
Sbjct: 142 LCDFGVAALLN---QNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATG 198

Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
             P     + +          +P S    ++ N  S+    FVA             AC 
Sbjct: 199 NPPYS---DVD---AFRAMMLIPKSKPPRLEDNGYSKLLREFVA-------------ACL 239

Query: 123 VESPEQRINAKEIVTKLLKIR 143
            E P++R++A+E    LLK +
Sbjct: 240 DEEPKERLSAEE----LLKSK 256

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 42.1 bits (99), Expect = 3e-05
 Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 21/111 (18%)

Query: 30  IGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWVNDWLPIST 88
           I + APE    GR ++  DV+S+GI+L ETF+ G  P   + N++              T
Sbjct: 159 IKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ--------------T 204

Query: 89  MEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL 139
            E ++            A + C   ++ L + C    PE R +  EI  +L
Sbjct: 205 RERIESGY------RMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNEL 249

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 41.6 bits (98), Expect = 6e-05
 Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 17/90 (18%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSAN---------GDVYSFGIM 55
           L DF I+  L     S  +T++     YMAPE     R+             DV+S GI 
Sbjct: 156 LCDFGISGRLV---DSKAKTRSAGCAAYMAPE-----RIDPPDPNPKYDIRADVWSLGIS 207

Query: 56  LMETFTGKKPTDEIFNEEMTLKHWVNDWLP 85
           L+E  TG+ P      E   L   + +  P
Sbjct: 208 LVELATGQFPYKNCKTEFEVLTKILQEEPP 237

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 41.0 bits (96), Expect = 8e-05
 Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 1/74 (1%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  + DF +A+ +   D    + + L  + +MAPE   +G+ +   DV+SFG+++ E  T
Sbjct: 149 VVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILT 208

Query: 62  -GKKPTDEIFNEEM 74
            G++P   + N+E+
Sbjct: 209 LGQQPYPALNNQEV 222

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 40.9 bits (96), Expect = 9e-05
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           +  + D  I+K+L    ++M +TQ   T  YMAPE  +    S   D++S G +L E  T
Sbjct: 141 LVKIGDLGISKVLK---KNMAKTQI-GTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMAT 196

Query: 62  GKKP 65
              P
Sbjct: 197 FAPP 200

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 40.7 bits (95), Expect = 9e-05
 Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 4/66 (6%)

Query: 3   AHLSDFSIAKLLTGEDQSMTQTQTLAT--IGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           A +SDF ++K L G D++  + +T     + + APE     + S+  DV+SFG+++ E F
Sbjct: 134 AKISDFGLSKAL-GADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAF 192

Query: 61  T-GKKP 65
           + G+KP
Sbjct: 193 SYGQKP 198

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           L DF ++  L     S+ +T    T  YMAPE  +    S   D++S G+ L+E  TG+ 
Sbjct: 142 LCDFGVSGQLV---NSLAKTFV-GTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRF 197

Query: 65  P 65
           P
Sbjct: 198 P 198

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 26/146 (17%)

Query: 1   MVAH-----LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
           MVA      + DF + + +   D      + L  + +MAPE  ++G  +   DV+SFG++
Sbjct: 151 MVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVV 210

Query: 56  LMETFT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFV 114
           L E  T  ++P   + NEE+ LK             V+D   L          E C   +
Sbjct: 211 LWEMATLAEQPYQGLSNEEV-LKF------------VIDGGHLDL-------PENCPDKL 250

Query: 115 FNLAMACTVESPEQRINAKEIVTKLL 140
             L   C   +P+ R    EIV+ L 
Sbjct: 251 LELMRMCWQYNPKMRPTFLEIVSSLK 276

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 40.9 bits (96), Expect = 1e-04
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  +SDF +A+ +  +DQ  +   T   + +  PE     R S+  DV+SFG+++ E F+
Sbjct: 138 VVKVSDFGLARYVL-DDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFS 196

Query: 62  -GKKPTDEIFNEE 73
            GK P +   N E
Sbjct: 197 EGKMPYERFSNSE 209

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 5/73 (6%)

Query: 5   LSDFSIAKLLTGEDQSM-TQTQTLA-TIGYMAPEYGREGRVSANG---DVYSFGIMLMET 59
           L DF  A  L     +M  + Q+LA T  YMAPE    G+   +G   D++S G +++E 
Sbjct: 140 LGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEM 199

Query: 60  FTGKKPTDEIFNE 72
            TGK+P  E+ NE
Sbjct: 200 ATGKRPWSELDNE 212

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 40.6 bits (95), Expect = 1e-04
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 8/73 (10%)

Query: 5   LSDF-SIAKL---LTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           ++DF + A+L    TG  +   Q Q L TI +MAPE  R  +   + DV+S G +++E  
Sbjct: 145 IADFGAAARLAAKGTGAGE--FQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMA 202

Query: 61  TGKKP--TDEIFN 71
           T K P   ++  N
Sbjct: 203 TAKPPWNAEKHSN 215

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 21/115 (18%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           L DF ++  L     S+ +T  + T  YMAPE     +   + DV+S GI  ME   G+ 
Sbjct: 136 LCDFGVSTQLV---NSIAKTY-VGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRF 191

Query: 65  PTDEIFNEEMTLKHWVNDWLPISTME--------VVDVNLLSQEDIHFVAKEQCV 111
           P  +I   + +L       +P+  ++        V+ V   S++ +HF+   QC+
Sbjct: 192 PYPQIQKNQGSL-------MPLQLLQCIVDEDPPVLPVGQFSEKFVHFIT--QCM 237

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 5/62 (8%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATI--GYMAPEYGREGRVSANGDVYSFGIMLMET 59
           V  +SDF +++    ED  +  +  L  I   + APE    GR S+  DV+S+GI+L ET
Sbjct: 131 VLKISDFGMSR---QEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWET 187

Query: 60  FT 61
           F+
Sbjct: 188 FS 189

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           + D  +AKLL+  D +      + T  Y++PE   +   +   DV++ G++L E  TGK 
Sbjct: 142 IGDLGVAKLLS--DNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKH 199

Query: 65  PTD 67
           P D
Sbjct: 200 PFD 202

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 40.2 bits (95), Expect = 2e-04
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           L DF I+K+L+     + +T  + T  Y++PE  +    +   D++S G +L E  T K 
Sbjct: 144 LGDFGISKVLS-STVDLAKTV-VGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKH 201

Query: 65  P 65
           P
Sbjct: 202 P 202

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 30/139 (21%), Positives = 53/139 (38%), Gaps = 21/139 (15%)

Query: 5   LSDFSIAK-LLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
           + DF + + L   ED  + +        + APE  R    S   DV+ FG+ L E FT G
Sbjct: 138 IGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYG 197

Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
           ++P                 W  +S  ++  +  + +E       E C   ++N+ + C 
Sbjct: 198 EEP-----------------WAGLSGSQI--LKKIDKEGERLERPEACPQDIYNVMLQCW 238

Query: 123 VESPEQRINAKEIVTKLLK 141
             +P  R     +   L +
Sbjct: 239 AHNPADRPTFAALREFLPE 257

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 31/139 (22%), Positives = 61/139 (43%), Gaps = 21/139 (15%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           +SDF +++ +  ED  + +++    + +MA E   +   +   DV+SFG++L E  T G 
Sbjct: 168 ISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 227

Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
            P   I  E +        +  + T   ++              E C   ++NL + C  
Sbjct: 228 NPYPGIAPERL--------FNLLKTGYRME------------RPENCSEEMYNLMLTCWK 267

Query: 124 ESPEQRINAKEIVTKLLKI 142
           + P++R    +I  +L K+
Sbjct: 268 QEPDKRPTFADISKELEKM 286

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 39.7 bits (93), Expect = 3e-04
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           ++DF +A+++  ED    +      I + APE     R S   DV+SFGI+L E  T G+
Sbjct: 144 VADFGLARVI-KEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGR 202

Query: 64  KP 65
            P
Sbjct: 203 MP 204

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 21/136 (15%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           MV  ++DF +++ +   D           I +M PE     R +   DV+++G++L E F
Sbjct: 167 MVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 226

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           + G +P   + +EE+ + +            V D N+LS         + C   ++NL  
Sbjct: 227 SYGMQPYYGMAHEEV-IYY------------VRDGNVLS-------CPDNCPLELYNLMR 266

Query: 120 ACTVESPEQRINAKEI 135
            C  + P  R +   I
Sbjct: 267 LCWSKLPSDRPSFASI 282

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 39.6 bits (92), Expect = 3e-04
 Identities = 29/136 (21%), Positives = 61/136 (44%), Gaps = 21/136 (15%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           +SD  + + +   D       +L  I +M+PE    G+ S + D++S+G++L E F+ G 
Sbjct: 165 ISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 224

Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
           +P     N+++                   + ++    +     + C ++V+ L + C  
Sbjct: 225 QPYCGYSNQDV-------------------IEMIRNRQV-LPCPDDCPAWVYTLMLECWN 264

Query: 124 ESPEQRINAKEIVTKL 139
           E P +R   K+I ++L
Sbjct: 265 EFPSRRPRFKDIHSRL 280

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 38.9 bits (91), Expect = 4e-04
 Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 17/76 (22%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG--------DVYSFGIML 56
           L DF I+  L     S+ +T+      YMAPE     R+  +         DV+S GI L
Sbjct: 149 LCDFGISGQLV---DSIAKTRDAGCRPYMAPE-----RIDPSARDGYDVRSDVWSLGITL 200

Query: 57  METFTGKKPTDEIFNE 72
            E  TGK P  + +N 
Sbjct: 201 YEVATGKFPYPK-WNS 215

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 38.7 bits (90), Expect = 5e-04
 Identities = 18/77 (23%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
              +SDF +++ +  +D+  +   +   + +  PE     + S+  DV++FG+++ E ++
Sbjct: 138 CVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYS 196

Query: 62  -GKKPTDEIFNEEMTLK 77
            GK P +   N E   K
Sbjct: 197 LGKMPYERFNNSETVEK 213

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 38.9 bits (91), Expect = 5e-04
 Identities = 32/142 (22%), Positives = 56/142 (39%), Gaps = 24/142 (16%)

Query: 5   LSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
           L DF +++ L  ED+S    ++    I +MAPE     R ++  DV+ FG+ + E    G
Sbjct: 148 LGDFGLSRYL--EDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLG 205

Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
            KP   + N ++  +    + LP+                       C   +++L   C 
Sbjct: 206 VKPFQGVKNNDVIGRIENGERLPMP--------------------PNCPPTLYSLMTKCW 245

Query: 123 VESPEQRINAKEIVTKLLKIRD 144
              P +R    E+  +L  I  
Sbjct: 246 AYDPSKRPRFTELKAQLSDILQ 267

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 38.6 bits (90), Expect = 5e-04
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           L DF ++  L     S+  T  + T  YM+PE  + G+ +   DV+S GI ++E   GK 
Sbjct: 145 LCDFGVSGELI---NSIADT-FVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKF 200

Query: 65  PTDE 68
           P   
Sbjct: 201 PFAF 204

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 38.8 bits (90), Expect = 5e-04
 Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 26/145 (17%)

Query: 1   MVAH-----LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
           MVAH     + DF + + +   D      + L  + +MAPE  ++G  + + D++SFG++
Sbjct: 151 MVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 210

Query: 56  LMETFT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFV 114
           L E  +  ++P   + NE++ LK             V+D   L Q        + C   V
Sbjct: 211 LWEITSLAEQPYQGLSNEQV-LKF------------VMDGGYLDQ-------PDNCPERV 250

Query: 115 FNLAMACTVESPEQRINAKEIVTKL 139
            +L   C   +P+ R    EIV  L
Sbjct: 251 TDLMRMCWQFNPKMRPTFLEIVNLL 275

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 38.7 bits (90), Expect = 5e-04
 Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 22/139 (15%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  +SDF + + +  +D+  + +     + +  PE     + S+  DV+SFG+++ E FT
Sbjct: 138 VVKVSDFGMTRYVL-DDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFT 196

Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            GK P    F ++             S  EVV+  ++S+    +  K   ++ V+ +  +
Sbjct: 197 EGKMP----FEKK-------------SNYEVVE--MISRGFRLYRPKLASMT-VYEVMYS 236

Query: 121 CTVESPEQRINAKEIVTKL 139
           C  E PE R    E++  +
Sbjct: 237 CWHEKPEGRPTFAELLRAI 255

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 38.8 bits (90), Expect = 5e-04
 Identities = 32/144 (22%), Positives = 65/144 (45%), Gaps = 22/144 (15%)

Query: 1   MVAHLSDFSIAKLLTGEDQ-SMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +   +SDF ++++L  + + + T +     I + APE     + ++  DV+SFGI++ E 
Sbjct: 144 LECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEV 203

Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
            + G++P  ++ N E+              M+ ++      +     A   C S V+ L 
Sbjct: 204 MSFGERPYWDMSNHEV--------------MKAIN------DGFRLPAPMDCPSAVYQLM 243

Query: 119 MACTVESPEQRINAKEIVTKLLKI 142
           + C  +   +R    +IV  L K+
Sbjct: 244 LQCWQQDRARRPRFVDIVNLLDKL 267

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 38.9 bits (90), Expect = 5e-04
 Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 21/136 (15%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           + DF + + +   D      + L  + +M+PE  ++G  +   DV+SFG++L E  T  +
Sbjct: 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 219

Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
           +P   + NE++ L+             V++  LL + D        C   +F L   C  
Sbjct: 220 QPYQGMSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLFELMRMCWQ 259

Query: 124 ESPEQRINAKEIVTKL 139
            +P+ R +  EI++ +
Sbjct: 260 YNPKMRPSFLEIISSI 275

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 38.5 bits (90), Expect = 5e-04
 Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 3   AHLSDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           A +SDF +++ L  G D     T     + + APE    G+ S+  DV+S+G+ L E F+
Sbjct: 134 AKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFS 193

Query: 62  -GKKPTDEIFNEEMT 75
            G KP  E+   E+ 
Sbjct: 194 YGAKPYGEMKGAEVI 208

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 38.7 bits (91), Expect = 5e-04
 Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 20/133 (15%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           L+DF  A  LT +++S   +  + T  +MAPE  +        D++S GIM +E   G+ 
Sbjct: 157 LADFGFAAQLT-KEKSKRNSV-VGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEP 214

Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
           P          L       +P     + +    S E   F+ K             C V+
Sbjct: 215 PYLR-EPPLRALFLITTKGIP----PLKNPEKWSPEFKDFLNK-------------CLVK 256

Query: 125 SPEQRINAKEIVT 137
            PE+R +A+E++ 
Sbjct: 257 DPEKRPSAEELLQ 269

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 38.4 bits (89), Expect = 6e-04
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           +  ++DF +A LL  +D+    ++    I +MA E    GR +   DV+S+G+ + E  +
Sbjct: 147 IVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMS 206

Query: 62  -GKKP 65
            G +P
Sbjct: 207 YGAEP 211

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 38.6 bits (90), Expect = 6e-04
 Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           VA ++DF +A+ +          + +  I +M PE   +G  ++  DV+SFG++L E F+
Sbjct: 157 VAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFS 216

Query: 62  -GKKPTDEIFNEE 73
            G  P     N+E
Sbjct: 217 LGYMPYPGRTNQE 229

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 38.5 bits (89), Expect = 7e-04
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 1/94 (1%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           ++DF +A+LL G+++          I +MA E     + +   DV+S+G+ + E  T G 
Sbjct: 150 ITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGG 209

Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
           KP D I   E+       + LP   +  +DV ++
Sbjct: 210 KPYDGIPTREIPDLLEKGERLPQPPICTIDVYMV 243

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 37.9 bits (88), Expect = 0.001
 Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 22/126 (17%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           ++DF +A+L+  +++   +      I + APE    G  +   DV+SFGI+L E  T G+
Sbjct: 143 IADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGR 201

Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
            P   + N E+           I  +E                 + C   ++ L   C  
Sbjct: 202 IPYPGMTNPEV-----------IQNLE---------RGYRMPRPDNCPEELYELMRLCWK 241

Query: 124 ESPEQR 129
           E PE+R
Sbjct: 242 EKPEER 247

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 37.8 bits (88), Expect = 0.001
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG--DVYSFGIMLMETFTG 62
           L+DF ++K    E++    +    TI YMAPE  R G    +   D +S G++  E  TG
Sbjct: 146 LTDFGLSKEFLAEEEERAYS-FCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTG 204

Query: 63  KKP 65
             P
Sbjct: 205 ASP 207

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 37.8 bits (87), Expect = 0.001
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           L+DF +A  LT  D  + +   + T  +MAPE  ++    +  D++S GI  +E   G+ 
Sbjct: 142 LADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEP 199

Query: 65  PTDEI 69
           P  E+
Sbjct: 200 PHSEL 204

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 37.9 bits (88), Expect = 0.001
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 3/61 (4%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           +SD  +A  L G            T GYMAPE  +      + D ++ G  L E   G+ 
Sbjct: 136 ISDLGLAVELKGGK---KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRS 192

Query: 65  P 65
           P
Sbjct: 193 P 193

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 37.4 bits (87), Expect = 0.001
 Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 29/97 (29%)

Query: 48  DVYSFGIMLMETFTGKKP-----TDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDI 102
           D+YS G++L E FTGK P     T EI++  + +    +  LP+                
Sbjct: 204 DIYSLGVVLWEIFTGKIPFENLTTKEIYD--LIINKNNSLKLPLD--------------- 246

Query: 103 HFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL 139
                  C   +  +  ACT     +R N KEI+  L
Sbjct: 247 -------CPLEIKCIVEACTSHDSIKRPNIKEILYNL 276

Length = 283

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           + DF +A+ +  +   +++  T   + +MAPE       +   DV+SFGI+L E FT G 
Sbjct: 280 ICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGG 339

Query: 64  KPTDEI-FNEE 73
            P  E+  NE+
Sbjct: 340 TPYPELPMNEQ 350

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 37.4 bits (87), Expect = 0.001
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 5   LSDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           + DF + K+L   ++    +    + I + APE   E + S   DV+SFG++L E FT
Sbjct: 149 IGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 37.6 bits (87), Expect = 0.001
 Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY--GREGRVSANGDVYSFGIMLMETFTG 62
           L+DF ++K    E++  T +    TI YMAPE   G+ G   A  D +S GI++ E  TG
Sbjct: 146 LTDFGLSKEFLSEEKERTYS-FCGTIEYMAPEIIRGKGGHGKAV-DWWSLGILIFELLTG 203

Query: 63  KKP 65
             P
Sbjct: 204 ASP 206

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           ++DF +AKLL  +++          I +MA E       +   DV+S+G+ + E  T G 
Sbjct: 150 ITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 209

Query: 64  KPTDEIFNEEMT 75
           KP D I   E++
Sbjct: 210 KPYDGIPASEIS 221

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 37.2 bits (87), Expect = 0.002
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           L+DF +A  L    +       + T  +MAPE       S   D++S G  ++E  TG  
Sbjct: 140 LADFGVATKLNDVSK--DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNP 197

Query: 65  P 65
           P
Sbjct: 198 P 198

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 37.2 bits (86), Expect = 0.002
 Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)

Query: 3   AHLSDFSIAKLLTGEDQSMTQTQTLAT--IGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           A +SDF ++K L G D S  + ++     + + APE     + S+  DV+S+GI + E F
Sbjct: 134 AKISDFGLSKAL-GADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAF 192

Query: 61  T-GKKP 65
           + G+KP
Sbjct: 193 SYGQKP 198

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 37.1 bits (86), Expect = 0.002
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 4/65 (6%)

Query: 5   LSDFSIAKLLTGEDQSMT---QTQTL-ATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           +SDF I+K L     S        +L  ++ +MAPE  ++   +   D++S G +++E  
Sbjct: 147 ISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEML 206

Query: 61  TGKKP 65
           TGK P
Sbjct: 207 TGKHP 211

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 37.0 bits (86), Expect = 0.002
 Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 23/143 (16%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  ++DF +A+ +   D     T     + +MAPE   +   +   DV+SFG++L E FT
Sbjct: 170 VMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 229

Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQ-CVSFVFNLAM 119
            G  P   I  EE+                     LL +   + + K Q C   +++L  
Sbjct: 230 LGGSPYPGIPVEEL-------------------FKLLKEG--YRMEKPQNCTQELYHLMR 268

Query: 120 ACTVESPEQRINAKEIVTKLLKI 142
            C  E P QR   K++V  L ++
Sbjct: 269 DCWHEVPSQRPTFKQLVEDLDRM 291

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  ++DF +A+ +   D     T     + +MAPE   +   +   DV+SFG++L E FT
Sbjct: 172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFT 231

Query: 62  -GKKPTDEIFNEEM 74
            G  P   I  EE+
Sbjct: 232 LGGSPYPGIPVEEL 245

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 4/88 (4%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           MVA L DF IA+ L   + SM    T   T  Y++PE  +    +   D++S G +L E 
Sbjct: 139 MVAKLGDFGIARQL---NDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYEL 195

Query: 60  FTGKKPTDEIFNEEMTLKHWVNDWLPIS 87
            T K P +     ++ LK     + PIS
Sbjct: 196 CTLKHPFEGNNLHQLVLKICQGYFAPIS 223

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 7/67 (10%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY----GREGRVSANGDVYSFGIMLMETF 60
           L DF I+  L     S+ +T       YMAPE       +       DV+S GI ++E  
Sbjct: 145 LCDFGISGYLV---DSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELA 201

Query: 61  TGKKPTD 67
           TG+ P D
Sbjct: 202 TGRFPYD 208

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 36.7 bits (85), Expect = 0.003
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 5/74 (6%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE-YGREGRVSANGDVYSFGIMLMETFTGK 63
           L+DF ++K     D          T+ YMAPE   R G  + + D +SFG+++ E  TG 
Sbjct: 139 LTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGH-TQSADWWSFGVLMFEMLTGS 195

Query: 64  KP-TDEIFNEEMTL 76
            P   +   E MT+
Sbjct: 196 LPFQGKDRKETMTM 209

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 16/60 (26%), Positives = 33/60 (55%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           +  + DF +A+ +  +   +++  T   + +MAPE   +   +   DV+S+GI+L E F+
Sbjct: 275 IVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFS 334

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 4/76 (5%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  ++DF +A+++  ED   T  +     I + APE    G  +   DV+SFGI+LME 
Sbjct: 139 LVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 196

Query: 60  FT-GKKPTDEIFNEEM 74
            T G+ P   + N E+
Sbjct: 197 VTYGRIPYPGMSNPEV 212

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 32/130 (24%), Positives = 51/130 (39%), Gaps = 22/130 (16%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           ++  ++DF +A+++  ED   T  +     I + APE    G  +   DV+SFGI+L E 
Sbjct: 140 LMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEI 197

Query: 60  FTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
            T  K                   +P   M   DV    Q        E C   ++++  
Sbjct: 198 VTYGK-------------------IPYPGMSNSDVMSALQRGYRMPRMENCPDELYDIMK 238

Query: 120 ACTVESPEQR 129
            C  E  E+R
Sbjct: 239 TCWKEKAEER 248

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 36.5 bits (85), Expect = 0.003
 Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 30/137 (21%)

Query: 3   AHLSDFSIAKLLTGEDQSMTQTQTLATIG---YMAPEYGREGRVSANGDVYSFGIMLMET 59
           A L+DF ++  LT    +M +  T+  IG   +MAPE  +E   +   D++S GI  +E 
Sbjct: 138 AKLADFGVSGQLTD---TMAKRNTV--IGTPFWMAPEVIQEIGYNNKADIWSLGITAIEM 192

Query: 60  FTGKKPTDEI--FNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNL 117
             GK P  +I        + +      P  T+   D    S E   FV K          
Sbjct: 193 AEGKPPYSDIHPMRAIFMIPNK-----PPPTLS--DPEKWSPEFNDFVKK---------- 235

Query: 118 AMACTVESPEQRINAKE 134
              C V+ PE+R +A +
Sbjct: 236 ---CLVKDPEERPSAIQ 249

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 36.4 bits (85), Expect = 0.003
 Identities = 31/107 (28%), Positives = 41/107 (38%), Gaps = 32/107 (29%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTL-ATIGYMAPE------YGREGRVSANGDVYSFGIMLM 57
           L DF  AK L    +S  +T T   T  Y+APE      Y      S   D +S GI+L 
Sbjct: 134 LVDFGFAKKL----KSGQKTWTFCGTPEYVAPEIILNKGYDF----SV--DYWSLGILLY 183

Query: 58  ETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHF 104
           E  TG+ P    F E+        D  P+     +   L     + F
Sbjct: 184 ELLTGRPP----FGED--------DEDPMEIYNDI---LKGNGKLEF 215

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 36.2 bits (83), Expect = 0.004
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           L+DF +A  LT  D  + +   + T  +MAPE  ++    +  D++S GI  +E   G+ 
Sbjct: 142 LADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEP 199

Query: 65  PTDEI 69
           P  ++
Sbjct: 200 PNSDM 204

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 36.3 bits (84), Expect = 0.004
 Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 19/72 (26%)

Query: 5   LSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSAN----------GDVYSFG 53
           ++DF ++++L    Q+M     ++ TI YM+PE     R++ +          GD++S G
Sbjct: 209 IADFGVSRILA---QTMDPCNSSVGTIAYMSPE-----RINTDLNHGAYDGYAGDIWSLG 260

Query: 54  IMLMETFTGKKP 65
           + ++E + G+ P
Sbjct: 261 VSILEFYLGRFP 272

Length = 353

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 36.3 bits (84), Expect = 0.004
 Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 9/72 (12%)

Query: 5   LSDFSIAKL-LTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGK 63
           ++DF + K  + GE ++ T      T  Y+APE  +  + + + D +SFG++L E   G+
Sbjct: 137 IADFGMCKENMNGEGKAST---FCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQ 193

Query: 64  KP-----TDEIF 70
            P      DE+F
Sbjct: 194 SPFHGEDEDELF 205

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 36.2 bits (83), Expect = 0.004
 Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  ++DF +A+ +   D     T     + +MAPE   +   +   DV+SFG+++ E FT
Sbjct: 175 VMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 234

Query: 62  -GKKPTDEIFNEEM 74
            G  P   I  EE+
Sbjct: 235 LGGSPYPGIPVEEL 248

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	161
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.93
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.92
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.92
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.91
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.91
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.91
KOG0578	550	consensus p21-activated serine/threonine protein k	99.9
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.9
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.9
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.9
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.89
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.89
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.89
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.89
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.88
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.88
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.88
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.88
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.87
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.87
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.87
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.87
PHA02988	283	hypothetical protein; Provisional	99.87
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.86
KOG0198	313	consensus MEKK and related serine/threonine protei	99.86
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.85
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.85
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.85
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.85
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.85
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.85
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.85
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.84
PTZ00284	467	protein kinase; Provisional	99.84
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.84
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.84
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.84
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.84
PTZ00283	496	serine/threonine protein kinase; Provisional	99.83
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.83
PTZ00036	440	glycogen synthase kinase; Provisional	99.83
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.83
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.83
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.83
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.83
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.83
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.82
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.82
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.82
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.82
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.82
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.82
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.82
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.82
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.82
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.82
KOG0589	426	consensus Serine/threonine protein kinase [General	99.82
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.82
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.82
PTZ00267	478	NIMA-related protein kinase; Provisional	99.82
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.82
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.82
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.81
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.81
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.81
PHA03212	391	serine/threonine kinase US3; Provisional	99.81
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.81
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.81
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.81
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.81
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.81
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.81
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.81
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.81
PHA03207	392	serine/threonine kinase US3; Provisional	99.81
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.81
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.81
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.8
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.8
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.8
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.8
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.8
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.8
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.8
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.8
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.8
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.8
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.8
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.8
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.8
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.8
KOG0584	632	consensus Serine/threonine protein kinase [General	99.8
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.8
PHA02882	294	putative serine/threonine kinase; Provisional	99.79
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.79
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.79
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.79
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.79
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.79
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.79
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.79
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.79
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.79
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.79
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.79
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.79
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.79
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.79
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.79
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.79
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.79
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.79
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.79
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.78
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.78
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.78
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.78
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.78
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.78
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.78
PHA03211	461	serine/threonine kinase US3; Provisional	99.78
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.78
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.78
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.78
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.78
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.78
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.78
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.78
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.78
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.78
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.78
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.78
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.78
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.78
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.77
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.77
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.77
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.77
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.77
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.77
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.77
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.77
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.77
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.77
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.77
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.77
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.77
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.77
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.77
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.77
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.77
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.77
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.77
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.77
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.77
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.77
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.77
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.77
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.77
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.77
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.76
KOG3653	534	consensus Transforming growth factor beta/activin	99.76
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.76
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.76
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.76
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.76
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.76
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.76
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.76
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.76
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.76
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.76
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.76
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.76
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.76
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.76
PHA03210	501	serine/threonine kinase US3; Provisional	99.76
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.76
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.76
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.76
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.76
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.76
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.76
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.76
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.76
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.76
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.76
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.76
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.76
PHA03209	357	serine/threonine kinase US3; Provisional	99.76
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.76
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.76
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.76
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.76
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.76
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.76
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.76
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.76
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.76
KOG0605	550	consensus NDR and related serine/threonine kinases	99.76
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.75
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.75
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.75
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.75
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.75
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.75
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.75
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.75
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.75
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.75
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.75
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.75
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.75
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.75
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.75
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.75
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.75
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.74
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.74
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.74
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.74
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.74
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.74
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.74
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.74
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.74
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.74
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.74
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.74
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.74
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.74
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.74
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.74
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.74
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.74
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.74
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.74
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.74
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.74
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.74
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.74
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.74
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.73
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.73
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.73
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.73
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.73
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.73
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.73
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.73
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.73
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.73
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.73
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.73
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.73
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.73
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.73
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.73
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.73
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.73
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.72
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.72
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.72
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.72
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.72
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.72
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.72
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.72
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.72
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.72
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.72
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.72
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.72
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.72
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.72
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.72
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.72
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.72
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.72
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.72
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.72
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.72
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.72
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.72
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.72
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.72
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.71
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.71
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.71
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.71
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.71
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.71
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.71
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.71
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.71
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.71
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.71
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.71
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.71
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.71
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.71
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.7
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.7
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.7
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.7
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.7
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.7
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.7
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.7
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.7
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.7
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.7
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.7
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.7
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.7
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.7
PLN00181	793	protein SPA1-RELATED; Provisional	99.7
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.7
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.7
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.7
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.7
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.7
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.7
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.7
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.69
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.69
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.69
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.69
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.69
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.69
PLN00009	294	cyclin-dependent kinase A; Provisional	99.69
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.69
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.69
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.69
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.69
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.69
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.68
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.68
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.68
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.68
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.68
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.68
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.68
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.68
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.68
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.68
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.68
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.68
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.68
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.67
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.67
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.67
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.67
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.67
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.67
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.67
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.67
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.67
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.67
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.66
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.66
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.66
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.66
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.65
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.65
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.65
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.65
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.65
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.65
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.64
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.64
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.64
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.64
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.64
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.64
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.64
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.63
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.63
KOG0610	459	consensus Putative serine/threonine protein kinase	99.63
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.63
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.62
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.62
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.62
KOG0586	596	consensus Serine/threonine protein kinase [General	99.62
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.62
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.61
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.61
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.61
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.59
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.58
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.57
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.55
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.53
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.5
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.48
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.47
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.46
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.45
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.44
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.37
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.32
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.29
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.26
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.25
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.22
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.14
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.14
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.02
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.85
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.82
KOG1152	772	consensus Signal transduction serine/threonine kin	98.8
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.67
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	98.6
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.55
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	98.49
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.36
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	98.06
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	97.45
COG4248	637	Uncharacterized protein with protein kinase and he	97.34
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	97.28
KOG0606	1205	consensus Microtubule-associated serine/threonine	97.03
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	96.62
KOG1266	458	consensus Protein kinase [Signal transduction mech	96.37
KOG2137	700	consensus Protein kinase [Signal transduction mech	96.2
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	95.07
PRK09188	365	serine/threonine protein kinase; Provisional	94.21
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	94.15
KOG1093	725	consensus Predicted protein kinase (contains TBC a	93.92
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	91.23
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	89.03
PRK12274	218	serine/threonine protein kinase; Provisional	85.78

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.93  E-value=1.7e-26  Score=156.12  Aligned_cols=122  Identities=18%  Similarity=0.262  Sum_probs=90.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .|||||||++..+.+.    ...+++||..||+||.+.+..|+.++||||||+.++|++.|++|+...........+...
T Consensus       217 eVKicDFGVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~  292 (364)
T KOG0581|consen  217 EVKICDFGVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLC  292 (364)
T ss_pred             CEEeccccccHHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHH
Confidence            5899999999887432    456789999999999999999999999999999999999999998764222222221111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhH-HHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKE-QCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      .......               ...+. ..++++.+|+..||+.||..|||+++++.|=.-.
T Consensus       293 ~Iv~~pp---------------P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~  339 (364)
T KOG0581|consen  293 AIVDEPP---------------PRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIK  339 (364)
T ss_pred             HHhcCCC---------------CCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHh
Confidence            1110000               00011 3566799999999999999999999999985543

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.92  E-value=4.3e-25  Score=153.90  Aligned_cols=126  Identities=26%  Similarity=0.367  Sum_probs=94.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC--CCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR--EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~--~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      ++||+|||+++......  ...+...||..|||||++.  ...|+.++||||||+++||+++|+.||...... ......
T Consensus       182 ~~KI~DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~-~~~~~v  258 (362)
T KOG0192|consen  182 TLKIADFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV-QVASAV  258 (362)
T ss_pred             EEEECCCccceeecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH-HHHHHH
Confidence            79999999998864321  2233368999999999999  558999999999999999999999999875541 111111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhh
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR  148 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~  148 (161)
                      +....+                  ...+..++..+..+|.+||..||.+||++.+++..|..+......
T Consensus       259 ~~~~~R------------------p~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~  309 (362)
T KOG0192|consen  259 VVGGLR------------------PPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS  309 (362)
T ss_pred             HhcCCC------------------CCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence            111110                  111223556689999999999999999999999999999876554

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.92  E-value=5.7e-26  Score=159.48  Aligned_cols=123  Identities=32%  Similarity=0.481  Sum_probs=95.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      ++||+|||+||... +..+.......-++.|.|||.+....|+.++||||||+++||++| |+.|+......+.  .   
T Consensus       341 ~vKIsDFGLAr~~~-d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev--~---  414 (468)
T KOG0197|consen  341 VVKISDFGLARLIG-DDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEV--L---  414 (468)
T ss_pred             eEEEcccccccccC-CCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHH--H---
Confidence            68999999999543 334433444556788999999999999999999999999999998 8888765433211  0   


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                                     ...+.+.+++.+..|+..+.++|..||..+|++|||++.+...|..+...
T Consensus       415 ---------------~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~  464 (468)
T KOG0197|consen  415 ---------------ELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS  464 (468)
T ss_pred             ---------------HHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence                           01223455666778889999999999999999999999888888877654

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.91  E-value=1.2e-25  Score=165.16  Aligned_cols=126  Identities=29%  Similarity=0.496  Sum_probs=100.6

Q ss_pred             CceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      ++|||+|||++|.....+.+...+...-++.||+||.+....|++.+||||||+++||+++ |+.|+.+..+++..-  .
T Consensus       640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe--~  717 (774)
T KOG1026|consen  640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIE--C  717 (774)
T ss_pred             eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHH--H
Confidence            5799999999998766666655555667889999999999999999999999999999998 999988765543211  1


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      ..                  .+.....+.+|+.++.+||..||+.+|++||+++|+...|+++...-
T Consensus       718 i~------------------~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s  766 (774)
T KOG1026|consen  718 IR------------------AGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS  766 (774)
T ss_pred             HH------------------cCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence            11                  11112335788888999999999999999999999999999887643

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=3.8e-25  Score=152.42  Aligned_cols=115  Identities=23%  Similarity=0.340  Sum_probs=87.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+|++|||++-.+...  ......++||++|||||++.+..|+.++||||+|+..+||++|.+|+....+....+.  ..
T Consensus       149 ~vkl~DfgVa~ql~~~--~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlfl--Ip  224 (467)
T KOG0201|consen  149 DVKLADFGVAGQLTNT--VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFL--IP  224 (467)
T ss_pred             cEEEEecceeeeeech--hhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEe--cc
Confidence            5899999999876432  2234678999999999999988899999999999999999999999977655221111  01


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...|..                  .....++.+++|+..||+.||+.||||.++++|
T Consensus       225 k~~PP~------------------L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  225 KSAPPR------------------LDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             CCCCCc------------------cccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence            111111                  112344558999999999999999999999987

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.91  E-value=6.4e-25  Score=156.41  Aligned_cols=118  Identities=19%  Similarity=0.262  Sum_probs=89.7

Q ss_pred             CceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      |+|||+|||+|..+....  .+..+.+||+-|.|||++....++..+||||+||++|.++.|++||++..-.+. +    
T Consensus       155 ~~VKIgDFGLAt~le~~~--Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vket-y----  227 (592)
T KOG0575|consen  155 MNVKIGDFGLATQLEYDG--ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKET-Y----  227 (592)
T ss_pred             CcEEecccceeeeecCcc--cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHH-H----
Confidence            689999999999875432  345678999999999999988899999999999999999999999977422111 0    


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ..            .....+.+    +...+.+..+||..+|+.||.+|||+.+|+.|=--
T Consensus       228 ~~------------Ik~~~Y~~----P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff  272 (592)
T KOG0575|consen  228 NK------------IKLNEYSM----PSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFF  272 (592)
T ss_pred             HH------------HHhcCccc----ccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence            00            00011111    22445568899999999999999999999988543

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=2.4e-24  Score=152.42  Aligned_cols=117  Identities=24%  Similarity=0.283  Sum_probs=88.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+|..+...+  ..+...+||++|||||++....|..+.||||||++.+||+.|++||-...+    +.+...
T Consensus       407 ~vKltDFGFcaqi~~~~--~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P----lrAlyL  480 (550)
T KOG0578|consen  407 SVKLTDFGFCAQISEEQ--SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP----LRALYL  480 (550)
T ss_pred             cEEEeeeeeeecccccc--CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh----HHHHHH
Confidence            37999999999875433  256678999999999999999999999999999999999999999864222    111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      -.. ...     +        ....+...+..+.+|+.+||+.|+++|++|.++|+|
T Consensus       481 Ia~-ng~-----P--------~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  481 IAT-NGT-----P--------KLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             Hhh-cCC-----C--------CcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence            000 000     0        001124456679999999999999999999999987

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=1.7e-24  Score=150.63  Aligned_cols=134  Identities=18%  Similarity=0.174  Sum_probs=91.0

Q ss_pred             CceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .++||+|||+||.+.....   .+.++.|.||+|||++.. ..|+.+.|+|++|||++|+.+-+..|.+..+-++.+. .
T Consensus       147 ~~iKiaDFGLARev~SkpP---YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~K-I  222 (538)
T KOG0661|consen  147 DVIKIADFGLAREVRSKPP---YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYK-I  222 (538)
T ss_pred             ceeEecccccccccccCCC---cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHH-H
Confidence            3689999999999754333   456889999999998754 4599999999999999999999999988655443322 1


Q ss_pred             hhhh-cCC--CCcc------cccccccc--chhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           80 VNDW-LPI--STME------VVDVNLLS--QEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        80 ~~~~-~~~--~~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      +... .|.  .+.+      ........  ........ +..+.++.++|.+|+.|||.+||||+++++|-
T Consensus       223 c~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~-p~~s~~~~~li~~ll~WDP~kRpTA~~al~~p  292 (538)
T KOG0661|consen  223 CEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLL-PNASSEAASLIERLLAWDPDKRPTASQALQHP  292 (538)
T ss_pred             HHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhC-cccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence            1111 111  1111      00010000  01111111 23677899999999999999999999999874

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=9.8e-24  Score=138.85  Aligned_cols=118  Identities=23%  Similarity=0.305  Sum_probs=89.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      +|||+|||+++.+..  .....++.+||++||+||+++...|+.++||||+||+++||..-+.||.+.     .+...+.
T Consensus       166 vvKLGDfGL~r~l~s--~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~  238 (375)
T KOG0591|consen  166 VVKLGDFGLGRFLSS--KTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCK  238 (375)
T ss_pred             ceeeccchhHhHhcc--hhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHH
Confidence            589999999999854  233456789999999999999999999999999999999999999999774     2333333


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      .+..              .+.+......++..+..|+..|+..||+.||+...++..+.
T Consensus       239 KI~q--------------gd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~  283 (375)
T KOG0591|consen  239 KIEQ--------------GDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ  283 (375)
T ss_pred             HHHc--------------CCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence            2221              11111123566777999999999999999998544444443

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=1e-24  Score=147.09  Aligned_cols=135  Identities=21%  Similarity=0.172  Sum_probs=88.6

Q ss_pred             eeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCcccccccc-chhHHh
Q 043981            3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM-TLKHWV   80 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~-~~~~~~   80 (161)
                      +||+|||+||..........-+..+.|.||+|||++.. ..|+.+.||||.|||+.||++|++.|.+.+.-.+ .++...
T Consensus       164 lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~  243 (359)
T KOG0660|consen  164 LKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILEL  243 (359)
T ss_pred             EEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHh
Confidence            69999999998754312223356789999999998754 4599999999999999999999999988665332 222111


Q ss_pred             hhhcCCCCccccc------cc--cc--cchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLPISTMEVVD------VN--LL--SQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~~~~~~~~~------~~--~~--~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...++......+.      ..  ..  .+..+.. .-+...+..++|+.+||.+||.+|+|++|++.|
T Consensus       244 lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~-~fp~a~p~AidLlekmL~fdP~kRita~eAL~h  310 (359)
T KOG0660|consen  244 LGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSS-IFPNANPLAIDLLEKMLVFDPKKRITAEEALAH  310 (359)
T ss_pred             cCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHH-HcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            1111110000000      00  00  0000000 112455778999999999999999999999988

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.89  E-value=1.1e-24  Score=148.03  Aligned_cols=133  Identities=20%  Similarity=0.214  Sum_probs=91.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccc-cccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFN-EEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~-~~~~~~~~~   80 (161)
                      .+||+|||.|+.-     ....+..+.|..|+|||++.+..|+.++||||+|||+.|+.+|...|++-.. +...+.+.+
T Consensus       250 ~I~vIDFGsAtf~-----~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerI  324 (415)
T KOG0671|consen  250 AIKVIDFGSATFD-----HEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERI  324 (415)
T ss_pred             ceEEEecCCccee-----ccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHh
Confidence            5899999999873     2234668899999999999999999999999999999999999999988654 222333333


Q ss_pred             hhhcCCCCcccc-----------cc---cc----------ccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHH
Q 043981           81 NDWLPISTMEVV-----------DV---NL----------LSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIV  136 (161)
Q Consensus        81 ~~~~~~~~~~~~-----------~~---~~----------~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl  136 (161)
                      ....|..+....           +.   ..          .......+........++.+|+.+||.+||.+|+|+.|++
T Consensus       325 lGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL  404 (415)
T KOG0671|consen  325 LGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREAL  404 (415)
T ss_pred             hCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHh
Confidence            222221111110           00   00          0000111111234556799999999999999999999999


Q ss_pred             HHH
Q 043981          137 TKL  139 (161)
Q Consensus       137 ~~l  139 (161)
                      .|-
T Consensus       405 ~Hp  407 (415)
T KOG0671|consen  405 SHP  407 (415)
T ss_pred             cCH
Confidence            873

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.89  E-value=4.1e-24  Score=152.28  Aligned_cols=124  Identities=27%  Similarity=0.402  Sum_probs=95.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      +|||+|||-++.....   .....++||..|||||++...+.+.++||||||+++|||++|..||...+..--.+.    
T Consensus       250 ~VKIsDFGTS~e~~~~---STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwG----  322 (904)
T KOG4721|consen  250 VVKISDFGTSKELSDK---STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWG----  322 (904)
T ss_pred             eEEeccccchHhhhhh---hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEe----
Confidence            5899999999876422   344678999999999999999999999999999999999999999976443321111    


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhh
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                       .              ...-...+.+..|+..+.-|+..||.-.|..||++.+++.||.-...++.
T Consensus       323 -V--------------GsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pell  373 (904)
T KOG4721|consen  323 -V--------------GSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPELL  373 (904)
T ss_pred             -c--------------cCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHHh
Confidence             0              11111222345667778889999999999999999999999987665443

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.89  E-value=4.3e-24  Score=141.76  Aligned_cols=134  Identities=19%  Similarity=0.236  Sum_probs=89.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccc-hhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMT-LKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~-~~~~   79 (161)
                      ++||||||+||.+....+  ..+.++.|.||++||.+.+ .+|....|||+.||++.||++|...|.+...-++. .+..
T Consensus       139 vvKLCDFGFAR~L~~pgd--~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~k  216 (396)
T KOG0593|consen  139 VVKLCDFGFARTLSAPGD--NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRK  216 (396)
T ss_pred             cEEeccchhhHhhcCCcc--hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHH
Confidence            589999999999864222  3466889999999999988 56999999999999999999999999875543332 2221


Q ss_pred             hhhhcCCCCccccc----------cccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           80 VNDWLPISTMEVVD----------VNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        80 ~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ..........+.+.          +.....+... ...+..+..+++|+.+||+.||++|+++++++.|
T Consensus       217 tLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe-~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H  284 (396)
T KOG0593|consen  217 TLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLE-RKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH  284 (396)
T ss_pred             HHcccCHHHHHHhccCCceeeeecCCCCCccchh-hhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence            11111111111110          0000000000 0112344568999999999999999999999877

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.89  E-value=5.6e-24  Score=161.15  Aligned_cols=133  Identities=25%  Similarity=0.434  Sum_probs=100.1

Q ss_pred             CceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      .+|||+|||+||.+.....+.......-+..|||||.+....|+.++||||||+++||+++ |..||....+.+.... +
T Consensus       839 r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~-~  917 (1025)
T KOG1095|consen  839 RVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLD-V  917 (1025)
T ss_pred             CcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHH-H
Confidence            4799999999997655444433333345678999999999899999999999999999999 8899876544322111 0


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhhccCc
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGR  153 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~~~~~  153 (161)
                      ..                   ..+...+..|+..+.++|..||..+|++||++..++..+..+...........
T Consensus       918 ~~-------------------ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~~~~~  972 (1025)
T KOG1095|consen  918 LE-------------------GGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGTIYGP  972 (1025)
T ss_pred             Hh-------------------CCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccCcccc
Confidence            00                   11233356677778999999999999999999999999999887666555433

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=6.1e-24  Score=145.73  Aligned_cols=122  Identities=21%  Similarity=0.269  Sum_probs=90.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC---CCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR---VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~---~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||+|+...   ....-.+.+||+.|.|||++.+..   +..+.|+||+||++|-+++|..||........ +.+
T Consensus       317 llKItDFGlAK~~g---~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s-l~e  392 (475)
T KOG0615|consen  317 LLKITDFGLAKVSG---EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS-LKE  392 (475)
T ss_pred             EEEecccchhhccc---cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc-HHH
Confidence            58999999998863   223345689999999999998765   34478999999999999999999977544321 111


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ..               ....+.+..+.....+++.++|+..||..||+.|||+.++++|-|--
T Consensus       393 QI---------------~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~  441 (475)
T KOG0615|consen  393 QI---------------LKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFK  441 (475)
T ss_pred             HH---------------hcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhh
Confidence            10               11222222333567778899999999999999999999999987644

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.88  E-value=2.2e-23  Score=150.20  Aligned_cols=122  Identities=26%  Similarity=0.379  Sum_probs=96.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      +|||+|||++|++.++ .+.-.....-++-|.|||.+....++.++|||+||+++||+.+ |-.||.+.+..+.      
T Consensus       403 iVKvADFGLsRlMtgD-TYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqV------  475 (1157)
T KOG4278|consen  403 IVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------  475 (1157)
T ss_pred             eEEeeccchhhhhcCC-ceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHH------
Confidence            5899999999998653 3322233445778999999998899999999999999999998 8888876433211      


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                                    .-+...++++..+..|++.+..||..||+++|.+||++.|+.+.++.|..
T Consensus       476 --------------Y~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~  525 (1157)
T KOG4278|consen  476 --------------YGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS  525 (1157)
T ss_pred             --------------HHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence                          01123345555567888899999999999999999999999999999884

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.88  E-value=2.2e-23  Score=135.03  Aligned_cols=121  Identities=19%  Similarity=0.182  Sum_probs=91.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      -+|++|||+|..+..   .......+||+.|++||++...+|+..+|||+.|++++-++.|..||.+.+...  +.+.  
T Consensus       151 ~vKL~~FGvAi~l~~---g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r--lye~--  223 (355)
T KOG0033|consen  151 AVKLADFGLAIEVND---GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--LYEQ--  223 (355)
T ss_pred             ceeecccceEEEeCC---ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH--HHHH--
Confidence            379999999998762   223455789999999999999999999999999999999999999997632211  1110  


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                                   .+...++++.+......++.++|+.+||..||.+|+|+.|++.|-+--
T Consensus       224 -------------I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~  271 (355)
T KOG0033|consen  224 -------------IKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWIC  271 (355)
T ss_pred             -------------HhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhc
Confidence                         111222333333455667789999999999999999999999876543

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=3.8e-23  Score=149.01  Aligned_cols=117  Identities=21%  Similarity=0.257  Sum_probs=88.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCC-CCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~-~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+|..-..   .......||+++|.+||++.+..| ..++||||+|+|+|.+++|+.||++.     .+....
T Consensus       150 nIKIADFGMAsLe~~---gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd-----Nir~LL  221 (786)
T KOG0588|consen  150 NIKIADFGMASLEVP---GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD-----NIRVLL  221 (786)
T ss_pred             CEeeeccceeecccC---CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc-----cHHHHH
Confidence            379999999987432   234456799999999999999997 57799999999999999999999742     121111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ....              ...+.+  +.+.+.++.+|+.+||..||++|.|.+||++|-.-.
T Consensus       222 lKV~--------------~G~f~M--Ps~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~  267 (786)
T KOG0588|consen  222 LKVQ--------------RGVFEM--PSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLS  267 (786)
T ss_pred             HHHH--------------cCcccC--CCcCCHHHHHHHHHHhccCccccccHHHHhhCchhh
Confidence            1111              111111  356667789999999999999999999999997644

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.87  E-value=4.1e-23  Score=146.26  Aligned_cols=120  Identities=24%  Similarity=0.435  Sum_probs=83.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-----------CCCCccchhhhHHHHHHHhcCCCCcccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-----------VSANGDVYSFGIMLMETFTGKKPTDEIF   70 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-----------~~~~~dv~s~g~il~e~~~g~~p~~~~~   70 (161)
                      .+||+|||+|.-+..+-...-....+||.-||+||.+....           ...++||||+|||+|.|++|+.||....
T Consensus       497 ~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~  576 (677)
T KOG0596|consen  497 RLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII  576 (677)
T ss_pred             eEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH
Confidence            37999999998876544445556789999999999764321           5678999999999999999999997643


Q ss_pred             ccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           71 NEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .....+.....   |.  .++..+.. ..           ..++.++|..||++||.+|||+.++|+|
T Consensus       577 n~~aKl~aI~~---P~--~~Iefp~~-~~-----------~~~li~~mK~CL~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  577 NQIAKLHAITD---PN--HEIEFPDI-PE-----------NDELIDVMKCCLARDPKKRWSIPELLQH  627 (677)
T ss_pred             HHHHHHHhhcC---CC--ccccccCC-CC-----------chHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence            32222211100   10  00011110 00           1128899999999999999999999986

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.87  E-value=7.7e-23  Score=147.16  Aligned_cols=124  Identities=22%  Similarity=0.372  Sum_probs=100.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .||++|||++|.+.... +...+...-++-||+||.+....++.++|||=||+++||++. |..||++..+.+....   
T Consensus       529 CVKLaDFGLSR~~ed~~-yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~---  604 (974)
T KOG4257|consen  529 CVKLADFGLSRYLEDDA-YYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGH---  604 (974)
T ss_pred             eeeecccchhhhccccc-hhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEE---
Confidence            48999999999885433 334445556788999999998999999999999999999997 8899988766543222   


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                                       .+.+.+.+.++.|++.+..|+.+||+++|.+||++.++...|..+.+..
T Consensus       605 -----------------iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qee  653 (974)
T KOG4257|consen  605 -----------------IENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEE  653 (974)
T ss_pred             -----------------ecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHh
Confidence                             2234445557888889999999999999999999999999999988743

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.87  E-value=2.9e-22  Score=140.15  Aligned_cols=125  Identities=22%  Similarity=0.375  Sum_probs=87.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|+|||++.+..++.++||||||++++|+++ |..||........ +....
T Consensus       212 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~-~~~~~  290 (338)
T cd05102         212 VVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE-FCQRL  290 (338)
T ss_pred             cEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH-HHHHH
Confidence            479999999987533222222233456678999999988889999999999999999997 9999876433211 11100


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      ......                  ..+...+..+.+|+.+||+.||++|||+.++++.|+.+..+
T Consensus       291 ~~~~~~------------------~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~  337 (338)
T cd05102         291 KDGTRM------------------RAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE  337 (338)
T ss_pred             hcCCCC------------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            000000                  00122344588999999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.87  E-value=1.2e-22  Score=145.97  Aligned_cols=138  Identities=14%  Similarity=0.103  Sum_probs=91.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccccc-chhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM-TLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~-~~~~~~   80 (161)
                      .+||+|||.|......     .-..+.+.+|+|||++.+.+|+.+.|+||||||+.||.+|.+.|.+..+.++ ..+...
T Consensus       329 ~vKVIDFGSSc~~~q~-----vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~  403 (586)
T KOG0667|consen  329 RIKVIDFGSSCFESQR-----VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEV  403 (586)
T ss_pred             ceeEEecccccccCCc-----ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHH
Confidence            4899999999875321     2257899999999999999999999999999999999999988888655332 222111


Q ss_pred             hhhcCCCCcc-------cccc----------cc-----------------------c-cchhhhhhhhHHHHHHHHHHHH
Q 043981           81 NDWLPISTME-------VVDV----------NL-----------------------L-SQEDIHFVAKEQCVSFVFNLAM  119 (161)
Q Consensus        81 ~~~~~~~~~~-------~~~~----------~~-----------------------~-~~~~~~~~~~~~~~~~~~~l~~  119 (161)
                      ...++..+.+       .++.          ..                       . ................+.+|+.
T Consensus       404 lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk  483 (586)
T KOG0667|consen  404 LGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLK  483 (586)
T ss_pred             hCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHH
Confidence            1111111000       0000          00                       0 0000001111234567899999


Q ss_pred             HhcccCcccCCCHHHHHHHHHHhHH
Q 043981          120 ACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus       120 ~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                      +||++||..|+|+.++++|-.--..
T Consensus       484 ~~L~~dP~~R~tp~qal~Hpfl~~~  508 (586)
T KOG0667|consen  484 RCLEWDPAERITPAQALNHPFLTGT  508 (586)
T ss_pred             HHhccCchhcCCHHHHhcCcccccc
Confidence            9999999999999999999765543

>PHA02988 hypothetical protein; Provisional

Probab=99.87  E-value=2.2e-22  Score=137.59  Aligned_cols=119  Identities=22%  Similarity=0.325  Sum_probs=86.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC--CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE--GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~--~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++.+...     .....|+..|+|||++.+  ..++.++||||||+++||+++|+.||........ ....
T Consensus       161 ~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~-~~~i  234 (283)
T PHA02988        161 KLKIICHGLEKILSSP-----PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEI-YDLI  234 (283)
T ss_pred             cEEEcccchHhhhccc-----cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHH-HHHH
Confidence            5799999999865321     123467889999999865  5689999999999999999999999976432211 1110


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                      .....+.                  ..+..++..+.+|+.+||+.||++|||+++++..|..+..
T Consensus       235 ~~~~~~~------------------~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~  281 (283)
T PHA02988        235 INKNNSL------------------KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF  281 (283)
T ss_pred             HhcCCCC------------------CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence            0000000                  0011345568999999999999999999999999998764

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.86  E-value=1.2e-21  Score=125.29  Aligned_cols=122  Identities=20%  Similarity=0.200  Sum_probs=84.1

Q ss_pred             eeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhhh
Q 043981            3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVND   82 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~~   82 (161)
                      +|+  ||+++.....       ...|++.|+|||++.+..++.++||||+|+++|++++|+.||.........+......
T Consensus        50 ~~~--fG~~~~~~~~-------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~  120 (176)
T smart00750       50 LKL--DGSVAFKTPE-------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNG  120 (176)
T ss_pred             eee--ccceEeeccc-------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHH
Confidence            556  9988765321       1258899999999998889999999999999999999999986543322222222111


Q ss_pred             hcCCCCccccccccccchhhhhhhhHHHH--HHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           83 WLPISTMEVVDVNLLSQEDIHFVAKEQCV--SFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      ..+.....           ..  ......  ..+.+++.+||..+|.+|||+.+++.|+..+..+.
T Consensus       121 ~~~~~~~~-----------~~--~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~~  173 (176)
T smart00750      121 MPADDPRD-----------RS--NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAET  173 (176)
T ss_pred             hccCCccc-----------cc--cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHHH
Confidence            11110000           00  011122  25899999999999999999999999998886543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.86  E-value=1.1e-22  Score=138.53  Aligned_cols=126  Identities=29%  Similarity=0.392  Sum_probs=87.4

Q ss_pred             ceeeecccccccccCC-CCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccc-cccccchhH
Q 043981            2 VAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEI-FNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~-~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~-~~~~~~~~~   78 (161)
                      .+||+|||++...... ..........||+.||+||++... .....+||||+||++.||++|+.|+... ......+..
T Consensus       156 ~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~i  235 (313)
T KOG0198|consen  156 DVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLI  235 (313)
T ss_pred             eEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHH
Confidence            5899999999876531 112223457899999999999852 2345899999999999999999998763 111111110


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      ......|                   ..+...+.+..+|+.+|+..+|+.||||.+++.|..-.....
T Consensus       236 g~~~~~P-------------------~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  236 GREDSLP-------------------EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             hccCCCC-------------------CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence            0000000                   112334566899999999999999999999999987766543

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.85  E-value=6.3e-22  Score=129.19  Aligned_cols=136  Identities=18%  Similarity=0.129  Sum_probs=88.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCcccccccc-chhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEM-TLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~-~~~~~   79 (161)
                      .+||+|||+|+.+......  ..+.+-|.||+|||++.|.. |....|+||.|||+.|++.|.+.|.+...-++ ..+-.
T Consensus       139 ~lKiADFGLAr~f~~p~~~--~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~  216 (318)
T KOG0659|consen  139 QLKIADFGLARFFGSPNRI--QTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFR  216 (318)
T ss_pred             cEEeecccchhccCCCCcc--cccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHH
Confidence            4799999999998654332  33447899999999988765 99999999999999999988877776444222 11111


Q ss_pred             hhhh-cCCCCcccc---ccccccchhhh--hhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           80 VNDW-LPISTMEVV---DVNLLSQEDIH--FVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        80 ~~~~-~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      .... .+..+.+..   +.......+..  ...-..+....++|+.+||.+||.+|+|+.|+++|=
T Consensus       217 ~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~  282 (318)
T KOG0659|consen  217 ALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHP  282 (318)
T ss_pred             HcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcch
Confidence            1111 112222221   11111100000  001234556679999999999999999999999874

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.85  E-value=6.2e-22  Score=135.21  Aligned_cols=121  Identities=27%  Similarity=0.470  Sum_probs=86.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|+|||++....++.++||||+|++++|+++ |..||.+.....  +....
T Consensus       162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~--~~~~i  239 (283)
T cd05048         162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE--VIEMI  239 (283)
T ss_pred             cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHH
Confidence            479999999987543222222333456788999999888889999999999999999998 888987643321  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      .....                  ...+..++..+.+|+.+||+.||.+||++.+++++|+++
T Consensus       240 ~~~~~------------------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~  283 (283)
T cd05048         240 RSRQL------------------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW  283 (283)
T ss_pred             HcCCc------------------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence            10000                  001233456689999999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.85  E-value=9.6e-22  Score=140.54  Aligned_cols=128  Identities=25%  Similarity=0.288  Sum_probs=91.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC---CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE---GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~---~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .|||+|||++..-.............|...|||||++.-   .+|+.++|||+||+++||+++|..||. ....+..+..
T Consensus       526 kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dqIifm  604 (678)
T KOG0193|consen  526 KVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQIIFM  604 (678)
T ss_pred             cEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhheEEE
Confidence            689999999876332212222334568889999999863   359999999999999999999999998 3333333322


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      ..+.+...               ........++.++++|+..||.++++.||.+.+++..|+.+..+
T Consensus       605 VGrG~l~p---------------d~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~  656 (678)
T KOG0193|consen  605 VGRGYLMP---------------DLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS  656 (678)
T ss_pred             ecccccCc---------------cchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence            21211111               01112356677899999999999999999999999999988875

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=7.2e-21  Score=133.38  Aligned_cols=138  Identities=35%  Similarity=0.555  Sum_probs=99.5

Q ss_pred             CceeeecccccccccCCCCccccccc-cccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccc-cccchhH
Q 043981            1 MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFN-EEMTLKH   78 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~~~~~~~-~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~-~~~~~~~   78 (161)
                      |++||+|||+|+.....  ....... .||.+|++||+......+.++||||||++++|+++|+.+.+...+ ....+..
T Consensus       214 ~~aKlsDFGLa~~~~~~--~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~  291 (361)
T KOG1187|consen  214 FNAKLSDFGLAKLGPEG--DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVE  291 (361)
T ss_pred             CCEEccCccCcccCCcc--ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHH
Confidence            68999999999664221  1111222 799999999999888899999999999999999999988776542 3334666


Q ss_pred             HhhhhcC-CCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           79 WVNDWLP-ISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        79 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                      |...... ....+++|+.+......    .......+..+..+|++.+|..||+|.+|++.|+.+..
T Consensus       292 w~~~~~~~~~~~eiiD~~l~~~~~~----~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  292 WAKPLLEEGKLREIVDPRLKEGEYP----DEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             HHHHHHHCcchhheeCCCccCCCCC----hHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence            6543332 35666666665421110    01345558899999999999999999999998865543

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.85  E-value=3.7e-22  Score=135.05  Aligned_cols=133  Identities=18%  Similarity=0.122  Sum_probs=89.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccc-hhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMT-LKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~-~~~~   79 (161)
                      .+||||||.|+.+..+..   ..+.++|.+|+|||.+.+.. |+.+.||||.||++.||+.|+..|.+.....+. .+..
T Consensus       164 ~LKicDFGSAK~L~~~ep---niSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik  240 (364)
T KOG0658|consen  164 VLKICDFGSAKVLVKGEP---NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIK  240 (364)
T ss_pred             eEEeccCCcceeeccCCC---ceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHH
Confidence            589999999998865433   34578899999999988765 999999999999999999999999885443321 1111


Q ss_pred             hhhhcCCC-----Ccc---ccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           80 VNDWLPIS-----TME---VVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        80 ~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ....+...     ..+   .-.+.. .............+++..+|+.++|.++|.+|.++.+++.|
T Consensus       241 ~lG~Pt~e~I~~mn~~y~~~~~p~i-k~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h  306 (364)
T KOG0658|consen  241 VLGTPTREDIKSMNPNYTEFKFPQI-KAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH  306 (364)
T ss_pred             HhCCCCHHHHhhcCcccccccCccc-ccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence            11111100     000   000000 00010011233455678999999999999999999999876

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.85  E-value=1.1e-21  Score=137.66  Aligned_cols=136  Identities=18%  Similarity=0.149  Sum_probs=90.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      ++||+|||+|+++...... ..+..+-|.||++||++.+.. |....|+||.|||+.||+.|+..|++..+.++.-..+.
T Consensus       256 ~LKiaDFGLAr~y~~~~~~-~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfk  334 (560)
T KOG0600|consen  256 VLKIADFGLARFYTPSGSA-PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFK  334 (560)
T ss_pred             CEEeccccceeeccCCCCc-ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHH
Confidence            5799999999987654332 345577899999999998876 99999999999999999999999998776433221111


Q ss_pred             hhhcC--CCCc-----cccccccccchhhhhh-hhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLP--ISTM-----EVVDVNLLSQEDIHFV-AKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~--~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...-|  ..+.     .....+....+..... .....+...++|+..+|..||.+|.||.+++.+
T Consensus       335 lcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s  400 (560)
T KOG0600|consen  335 LCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS  400 (560)
T ss_pred             HhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence            11111  1111     0000111111111110 122335667899999999999999999988865

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.85  E-value=2.4e-21  Score=135.47  Aligned_cols=124  Identities=23%  Similarity=0.384  Sum_probs=87.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.............++..|++||++.+..++.++||||+|++++++++ |..||.+....+. +....
T Consensus       211 ~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~-~~~~~  289 (337)
T cd05054         211 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE-FCRRL  289 (337)
T ss_pred             cEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH-HHHHH
Confidence            479999999987643322222233456778999999988889999999999999999997 9999865322211 11000


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                      ......                  ..+......+.+++.+||+.+|++||++.+++++|.++..
T Consensus       290 ~~~~~~------------------~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         290 KEGTRM------------------RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             hccCCC------------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            000000                  0011223458899999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=8.9e-22  Score=142.26  Aligned_cols=108  Identities=19%  Similarity=0.265  Sum_probs=83.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      ++||+|||+++.....  ....++++||+.|+|||++.+..|+...|.|+||+++|||+.|+.||.+.++++. +     
T Consensus       506 h~kiADFGlcKe~m~~--g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~-F-----  577 (694)
T KOG0694|consen  506 HVKIADFGLCKEGMGQ--GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV-F-----  577 (694)
T ss_pred             cEEecccccccccCCC--CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH-H-----
Confidence            5899999999975432  2356779999999999999999999999999999999999999999987655432 1     


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA  132 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~  132 (161)
                                 +..+.....+    +...+.+..++|.++|..+|++|.-+
T Consensus       578 -----------dsI~~d~~~y----P~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  578 -----------DSIVNDEVRY----PRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             -----------HHHhcCCCCC----CCcccHHHHHHHHHHhccCcccccCC
Confidence                       1111111111    23455668899999999999999954

>PTZ00284 protein kinase; Provisional

Probab=99.84  E-value=1.1e-21  Score=142.66  Aligned_cols=135  Identities=19%  Similarity=0.138  Sum_probs=84.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccccc-chhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM-TLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~-~~~~~~   80 (161)
                      .+||+|||.+....     ......+||..|+|||++.+..++.++||||+||++||+++|+.||........ ......
T Consensus       286 ~vkl~DfG~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~  360 (467)
T PTZ00284        286 RVRICDLGGCCDER-----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKT  360 (467)
T ss_pred             eEEECCCCccccCc-----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            48999999876432     122346799999999999988899999999999999999999999976443211 111110


Q ss_pred             hhhcCCCCc---------cccccc---c--ccchhh------hhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTM---------EVVDVN---L--LSQEDI------HFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~---------~~~~~~---~--~~~~~~------~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ....+..+.         ..+...   .  ......      ...........+.+|+.+||++||++|||++|+++|-.
T Consensus       361 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~  440 (467)
T PTZ00284        361 LGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPY  440 (467)
T ss_pred             cCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcc
Confidence            000000000         000000   0  000000      00000112355789999999999999999999999754


Q ss_pred             H
Q 043981          141 K  141 (161)
Q Consensus       141 ~  141 (161)
                      -
T Consensus       441 ~  441 (467)
T PTZ00284        441 V  441 (467)
T ss_pred             c
Confidence            3

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.84  E-value=6.2e-21  Score=130.56  Aligned_cols=135  Identities=16%  Similarity=0.114  Sum_probs=84.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++....... .......|+..|+|||++.+..++.++|+||+|++++++++|+.||........... ...
T Consensus       138 ~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~-~~~  215 (287)
T cd07848         138 VLKLCDFGFARNLSEGSN-ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFT-IQK  215 (287)
T ss_pred             cEEEeeccCccccccccc-ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHH-HHH
Confidence            479999999987632211 122345689999999999888899999999999999999999999976433211110 000


Q ss_pred             hhcCC------------CCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPI------------STMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...+.            .......+................+..+.+|+.+||++||++|||++++++|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h  284 (287)
T cd07848         216 VLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH  284 (287)
T ss_pred             hhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            00000            0000000000000000000112245678999999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.84  E-value=2.5e-21  Score=134.23  Aligned_cols=127  Identities=21%  Similarity=0.298  Sum_probs=88.5

Q ss_pred             ceeeecccccccccCCCCc-ccc-ccccccccccCCCCCCC--CCCCCCccchhhhHHHHHHHhcCCCCccccccccchh
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQ-TQTLATIGYMAPEYGRE--GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~-~~~~g~~~~~~Pe~~~~--~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~   77 (161)
                      .|||+|||.+-.+...+.. ... ..++||+.||+||++..  ..|+.++||||||+...|++.|..||....+..+.+.
T Consensus       164 ~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~  243 (516)
T KOG0582|consen  164 TVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLL  243 (516)
T ss_pred             cEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHH
Confidence            4899999998776543332 111 56789999999999543  2499999999999999999999999988665544443


Q ss_pred             HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           78 HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ......+.. .....+..          ........+++++..||+.||.+|||+++++.|-
T Consensus       244 tLqn~pp~~-~t~~~~~d----------~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~  294 (516)
T KOG0582|consen  244 TLQNDPPTL-LTSGLDKD----------EDKKFSKSFREMIALCLVKDPSKRPTASKLLKHA  294 (516)
T ss_pred             HhcCCCCCc-ccccCChH----------HhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccH
Confidence            322221111 11111110          1123334689999999999999999999999874

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.84  E-value=3e-21  Score=129.74  Aligned_cols=136  Identities=19%  Similarity=0.146  Sum_probs=89.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      ++||+|||+||.+.....  ..+..+-|.||+|||++.+.. |+++.|+||+|||+.|++.+++.|.+..+-++.-....
T Consensus       215 ~lKiaDFGLAR~ygsp~k--~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~  292 (419)
T KOG0663|consen  215 ILKIADFGLAREYGSPLK--PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFK  292 (419)
T ss_pred             cEEecccchhhhhcCCcc--cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHH
Confidence            479999999999864322  234567899999999988765 99999999999999999999999988655333222111


Q ss_pred             hhhcCC--CCcccccc-----ccccchhhhhhhh--HH--HHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           81 NDWLPI--STMEVVDV-----NLLSQEDIHFVAK--EQ--CVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        81 ~~~~~~--~~~~~~~~-----~~~~~~~~~~~~~--~~--~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      .-..|.  .+......     ....+........  ..  .+....+|+..+|.+||.+|.||.|.++|=
T Consensus       293 llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~  362 (419)
T KOG0663|consen  293 LLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHE  362 (419)
T ss_pred             HhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccc
Confidence            111111  11111100     0011111100000  01  346678999999999999999999999874

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.84  E-value=5e-21  Score=135.61  Aligned_cols=123  Identities=21%  Similarity=0.350  Sum_probs=85.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      ++||+|||+++.+.............++..|+|||++....++.++||||+|++++++++ |+.||........ +....
T Consensus       250 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~-~~~~~  328 (374)
T cd05106         250 VAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK-FYKMV  328 (374)
T ss_pred             eEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH-HHHHH
Confidence            479999999987543222111222345667999999988889999999999999999997 9999876433221 11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                      ......                  ..+...+..+.+++.+||+.||++|||+.++++.|+++.
T Consensus       329 ~~~~~~------------------~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         329 KRGYQM------------------SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             HcccCc------------------cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            000000                  001112345889999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.83  E-value=3.1e-21  Score=140.82  Aligned_cols=117  Identities=23%  Similarity=0.292  Sum_probs=84.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.+.............||+.|+|||++.+..++.++||||+|+++|++++|+.||.......  +   ..
T Consensus       181 ~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~--~---~~  255 (496)
T PTZ00283        181 LVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEE--V---MH  255 (496)
T ss_pred             CEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH--H---HH
Confidence            589999999987643222222344679999999999998889999999999999999999999996532211  1   01


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .......    .           +.+...+..+.+++.+||..||.+||++.+++.|
T Consensus       256 ~~~~~~~----~-----------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        256 KTLAGRY----D-----------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             HHhcCCC----C-----------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            0000000    0           0012334568899999999999999999999886

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.83  E-value=4.7e-21  Score=131.34  Aligned_cols=133  Identities=20%  Similarity=0.210  Sum_probs=84.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....   .......|+..|+|||++.+..++.++||||+|++++++++|..||........ +.....
T Consensus       148 ~~kl~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~-~~~i~~  223 (290)
T cd07862         148 QIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ-LGKILD  223 (290)
T ss_pred             CEEEccccceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHH-HHHHHH
Confidence            5799999999875432   122345689999999999888899999999999999999999999976443221 111110


Q ss_pred             hh-c--CCCCccccc--cccccchh-h-hhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DW-L--PISTMEVVD--VNLLSQED-I-HFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~-~--~~~~~~~~~--~~~~~~~~-~-~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .. .  +........  ........ . .....+..+..+.+|+.+||+.||++|||+.+++.|
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h  287 (290)
T cd07862         224 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  287 (290)
T ss_pred             HhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence            00 0  000000000  00000000 0 000012344567899999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.83  E-value=4.7e-21  Score=138.22  Aligned_cols=135  Identities=18%  Similarity=0.208  Sum_probs=84.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.....   .....||+.|+|||++.+. .++.++||||+||+++++++|..||.+........ ...
T Consensus       209 ~vkL~DFGla~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~-~i~  284 (440)
T PTZ00036        209 TLKLCDFGSAKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLV-RII  284 (440)
T ss_pred             ceeeeccccchhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHH
Confidence            489999999987643222   2335789999999988654 58999999999999999999999997644322111 111


Q ss_pred             hhhc-CCC------Ccccccccc--ccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWL-PIS------TMEVVDVNL--LSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~-~~~------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      .... +..      .....+...  ..........+...+.++.+|+.+||.+||.+|||+.+++.|-.
T Consensus       285 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~  353 (440)
T PTZ00036        285 QVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPF  353 (440)
T ss_pred             HHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChh
Confidence            0000 000      000000000  00001111111223457899999999999999999999998854

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.83  E-value=8.3e-21  Score=129.57  Aligned_cols=123  Identities=21%  Similarity=0.378  Sum_probs=86.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.............++..|++||+..+..++.++||||||+++||+++ |..||.+.....  .....
T Consensus       147 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~--~~~~~  224 (279)
T cd05111         147 IVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE--VPDLL  224 (279)
T ss_pred             cEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHH
Confidence            579999999987643322222233456778999999988889999999999999999998 999986543221  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                      .......     .             +..+...+..++.+||..+|++|||+.+++..|..+.+
T Consensus       225 ~~~~~~~-----~-------------~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~  270 (279)
T cd05111         225 EKGERLA-----Q-------------PQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR  270 (279)
T ss_pred             HCCCcCC-----C-------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence            1000000     0             01122346789999999999999999999999888765

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.83  E-value=1.4e-20  Score=133.33  Aligned_cols=122  Identities=20%  Similarity=0.362  Sum_probs=83.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|++||++.+..++.++||||||++++++++ |..||........ .....
T Consensus       252 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~-~~~~~  330 (375)
T cd05104         252 ITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK-FYKMI  330 (375)
T ss_pred             cEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH-HHHHH
Confidence            479999999987643222111122345667999999988889999999999999999998 8888865432211 11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ......                  ..+...+.++.+|+.+||+.||++|||+.++++.|++.
T Consensus       331 ~~~~~~------------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         331 KEGYRM------------------LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             HhCccC------------------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence            100000                  00111234588999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.83  E-value=2.1e-21  Score=127.75  Aligned_cols=123  Identities=22%  Similarity=0.201  Sum_probs=92.6

Q ss_pred             CceeeecccccccccCCCCccccccccccccccCCCCCCC------CCCCCCccchhhhHHHHHHHhcCCCCcccccccc
Q 043981            1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE------GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM   74 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~------~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~   74 (161)
                      +.+||+|||++..+..+   ......+||++|.|||.+..      ..|+...|.|++|+|+|.++.|..||-...--.+
T Consensus       160 ~~i~isDFGFa~~l~~G---ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlM  236 (411)
T KOG0599|consen  160 MNIKISDFGFACQLEPG---EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLM  236 (411)
T ss_pred             cceEEeccceeeccCCc---hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHH
Confidence            46899999999887433   23456899999999998853      2478889999999999999999999854221111


Q ss_pred             chhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           75 TLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                        .               ...+..++.+..+...+.+...++|+.+||+.||.+|.|+++++.|-.-++
T Consensus       237 --L---------------R~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q  288 (411)
T KOG0599|consen  237 --L---------------RMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ  288 (411)
T ss_pred             --H---------------HHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence              0               011223344445556777888999999999999999999999999866544

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.83  E-value=5.8e-21  Score=131.04  Aligned_cols=128  Identities=25%  Similarity=0.340  Sum_probs=101.8

Q ss_pred             CceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      +.+||+|-.++|.+-+..........--+..||++|.+....|+..+|+||||+++||+.+ |+.|+...++.++.-.  
T Consensus       433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~y--  510 (563)
T KOG1024|consen  433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHY--  510 (563)
T ss_pred             eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHH--
Confidence            3589999999998765544433333445678999999998899999999999999999998 9999987776544221  


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhh
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR  148 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~  148 (161)
                                        .+.+++...+-+|+.++..+|..||..+|+.||+++|++..|.+...+..+
T Consensus       511 ------------------lkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~qlt~  561 (563)
T KOG1024|consen  511 ------------------LKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQLTR  561 (563)
T ss_pred             ------------------HhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHhh
Confidence                              122333344567888999999999999999999999999999998877654

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.83  E-value=5.3e-21  Score=132.65  Aligned_cols=68  Identities=18%  Similarity=0.239  Sum_probs=53.6

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccc
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEI   69 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~   69 (161)
                      .+||+|||+++.+...... .......||..|+|||++.+. .++.++|+||+|++++++++|+.||...
T Consensus       150 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~  219 (317)
T cd07868         150 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             cEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence            5899999999876432221 122346789999999998764 4889999999999999999999998653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=1.1e-20  Score=132.79  Aligned_cols=118  Identities=22%  Similarity=0.202  Sum_probs=85.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CC-CCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VS-ANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~-~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||++....  ......+..+||+.|+|||++.+.. |+ .++||||+|+++|.|++|..||.....  ..+...
T Consensus       159 ~~Kl~DFG~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~--~~l~~k  234 (370)
T KOG0583|consen  159 NLKLSDFGLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV--PNLYRK  234 (370)
T ss_pred             CEEEeccccccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH--HHHHHH
Confidence            58999999998763  1223456689999999999999877 85 779999999999999999999987221  111111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHH-HHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQC-VSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                         ...            .....    +... +.++..|+.+||..||.+|+|+.+++.|=+-.
T Consensus       235 ---i~~------------~~~~~----p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~  279 (370)
T KOG0583|consen  235 ---IRK------------GEFKI----PSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQ  279 (370)
T ss_pred             ---Hhc------------CCccC----CCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhc
Confidence               000            00011    1111 55688999999999999999999999665544

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.82  E-value=1.2e-20  Score=140.40  Aligned_cols=124  Identities=28%  Similarity=0.405  Sum_probs=88.8

Q ss_pred             ceeeecccccccccCCCCcccc-ccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~-~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      ++||+|||+||.......+... +...-+..|||||.+....|+.++||||||+++||+++ |..||.+....... .++
T Consensus       456 ~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l-~~~  534 (609)
T KOG0200|consen  456 VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEEL-LEF  534 (609)
T ss_pred             EEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHH-HHH
Confidence            6899999999975443333211 11113556999999998889999999999999999998 88998763211111 111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                      ..                  .+.++..+..+..++.++|..||+.+|++||++.++...+.....
T Consensus       535 l~------------------~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~  581 (609)
T KOG0200|consen  535 LK------------------EGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ  581 (609)
T ss_pred             Hh------------------cCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence            11                  122223345556778899999999999999999999999998654

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.82  E-value=2.6e-21  Score=137.93  Aligned_cols=115  Identities=23%  Similarity=0.341  Sum_probs=87.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      ++|+||||+||.+..+  ....++..||+.|||||++.+..|+..+|.||+||++||+..|++||....     +.+.+.
T Consensus       138 ~~KlcdFg~Ar~m~~~--t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s-----i~~Lv~  210 (808)
T KOG0597|consen  138 TLKLCDFGLARAMSTN--TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS-----ITQLVK  210 (808)
T ss_pred             ceeechhhhhhhcccC--ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH-----HHHHHH
Confidence            6899999999988642  234566789999999999999999999999999999999999999996521     111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      .+...              +..  .+...+..+.+|+...|..||.+|.|..+++.|-
T Consensus       211 ~I~~d--------------~v~--~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~Hp  252 (808)
T KOG0597|consen  211 SILKD--------------PVK--PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHP  252 (808)
T ss_pred             HHhcC--------------CCC--CcccccHHHHHHHHHHhhcChhhcccHHHHhcCh
Confidence            11100              000  0224456689999999999999999999998873

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.82  E-value=1.9e-20  Score=127.15  Aligned_cols=121  Identities=20%  Similarity=0.347  Sum_probs=84.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.............++..|++||++.+..++.++||||+|++++|+++ |..||.......  .....
T Consensus       151 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~--~~~~~  228 (273)
T cd05035         151 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE--IYDYL  228 (273)
T ss_pred             eEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence            479999999987643322211222345678999999988889999999999999999998 888886533211  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ......                  ..+...+..+.+++.+||+.||.+|||+.+++++|.++
T Consensus       229 ~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         229 RHGNRL------------------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             HcCCCC------------------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            110000                  00122344589999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.82  E-value=1.2e-20  Score=128.69  Aligned_cols=119  Identities=30%  Similarity=0.498  Sum_probs=83.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|+|||++.+..++.++||||+|++++++++ |..||.....+.  .....
T Consensus       160 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~--~~~~~  237 (280)
T cd05049         160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE--VIECI  237 (280)
T ss_pred             eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHH
Confidence            479999999986533222222233456778999999988889999999999999999998 999986543321  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ..   ....               ......+..+.+++.+||+.||++|||+.++++.|.
T Consensus       238 ~~---~~~~---------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         238 TQ---GRLL---------------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             Hc---CCcC---------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            10   0000               001123345889999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.82  E-value=1.3e-20  Score=129.08  Aligned_cols=124  Identities=26%  Similarity=0.450  Sum_probs=86.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|++||++.+..++.++|+||||++++++++ |..||.......  .....
T Consensus       158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~--~~~~i  235 (288)
T cd05093         158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--VIECI  235 (288)
T ss_pred             cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence            478999999986543222222233445778999999988889999999999999999998 888886543221  11110


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      .......                  .....+..+.+|+.+||+.+|.+|||+.+++..|+.+.+.
T Consensus       236 ~~~~~~~------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~  282 (288)
T cd05093         236 TQGRVLQ------------------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA  282 (288)
T ss_pred             HcCCcCC------------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence            0000000                  0011234589999999999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.82  E-value=2.9e-20  Score=131.09  Aligned_cols=135  Identities=17%  Similarity=0.112  Sum_probs=84.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....   .......||..|+|||++.+..++.++||||+|++++++++|+.||........ +.....
T Consensus       161 ~~kl~Dfg~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~-~~~~~~  236 (359)
T cd07876         161 TLKILDFGLARTACTN---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQ-WNKVIE  236 (359)
T ss_pred             CEEEecCCCccccccC---ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH
Confidence            5799999999764321   122335789999999999888899999999999999999999999976433211 100000


Q ss_pred             hhcCC--------------------CCccccccccccc--hhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DWLPI--------------------STMEVVDVNLLSQ--EDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~--------------------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      .....                    ......-......  ..............+.+|+.+||.+||++|||+.|++.|-
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp  316 (359)
T cd07876         237 QLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHP  316 (359)
T ss_pred             hcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCc
Confidence            00000                    0000000000000  0000000112345688999999999999999999999986


Q ss_pred             H
Q 043981          140 L  140 (161)
Q Consensus       140 ~  140 (161)
                      +
T Consensus       317 ~  317 (359)
T cd07876         317 Y  317 (359)
T ss_pred             h
Confidence            5

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.82  E-value=1.7e-20  Score=128.71  Aligned_cols=124  Identities=27%  Similarity=0.473  Sum_probs=87.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|++||++.+..++.++||||+|++++++++ |..||.......  .....
T Consensus       161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~~  238 (291)
T cd05094         161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE--VIECI  238 (291)
T ss_pred             cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence            579999999976543222222233456788999999988889999999999999999998 999986543221  11100


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      .   ......               .....+..+.+++.+||+.+|.+|||+.++++.|.++...
T Consensus       239 ~---~~~~~~---------------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~  285 (291)
T cd05094         239 T---QGRVLE---------------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA  285 (291)
T ss_pred             h---CCCCCC---------------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence            0   000000               0112234588999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.82  E-value=8e-21  Score=129.78  Aligned_cols=120  Identities=24%  Similarity=0.439  Sum_probs=83.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............+++.|++||++....++.++||||+|++++|+++ |..||......  ......
T Consensus       162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~i  239 (283)
T cd05091         162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVIEMI  239 (283)
T ss_pred             ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHH
Confidence            579999999887543222222233456778999999887789999999999999999998 77787653221  111111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ......                  .....++..+.+|+.+||+.+|+.||++.+++..|++
T Consensus       240 ~~~~~~------------------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         240 RNRQVL------------------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HcCCcC------------------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            110000                  0012344558899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.82  E-value=2.2e-20  Score=126.15  Aligned_cols=139  Identities=21%  Similarity=0.138  Sum_probs=90.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      ++||+|||+|+.+.-..  ...+..++|.+|+|||++.+. .|+...|+||+|||+.||++++..|.+..+..+......
T Consensus       158 ~lKlaDFGlAra~~ip~--~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~  235 (323)
T KOG0594|consen  158 VLKLADFGLARAFSIPM--RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFR  235 (323)
T ss_pred             cEeeeccchHHHhcCCc--ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            47999999999764222  234567899999999999887 599999999999999999999999988665333222221


Q ss_pred             hhhcC--CCCcccc---ccccccchhh-hhhhhH---HHHHHHHHHHHHhcccCcccCCCHHHHHHH--HHHh
Q 043981           81 NDWLP--ISTMEVV---DVNLLSQEDI-HFVAKE---QCVSFVFNLAMACTVESPEQRINAKEIVTK--LLKI  142 (161)
Q Consensus        81 ~~~~~--~~~~~~~---~~~~~~~~~~-~~~~~~---~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~--l~~~  142 (161)
                      ....|  ..+....   +.+....... ......   .......+++.+||+++|.+|.|++.++.|  +..+
T Consensus       236 ~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~  308 (323)
T KOG0594|consen  236 LLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL  308 (323)
T ss_pred             HcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence            11111  1222211   1110000000 000011   111467899999999999999999999998  4444

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.82  E-value=1e-20  Score=132.49  Aligned_cols=114  Identities=25%  Similarity=0.241  Sum_probs=88.4

Q ss_pred             eeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhhh
Q 043981            3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVND   82 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~~   82 (161)
                      |||+|||+|+.+.+..  ....+.+||+.|++||++.+.+|+.++||||+||+++|+.+-+.+|........     +..
T Consensus       145 VkLgDfGlaK~l~~~~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~L-----i~k  217 (426)
T KOG0589|consen  145 VKLGDFGLAKILNPED--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSEL-----ILK  217 (426)
T ss_pred             eeecchhhhhhcCCch--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHH-----HHH
Confidence            6999999999986432  245678999999999999999999999999999999999999999876433221     111


Q ss_pred             hcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           83 WLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ..+..               -.+.+...+.++..++..||..+|+.||++.+++.+
T Consensus       218 i~~~~---------------~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  218 INRGL---------------YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             Hhhcc---------------CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            11110               011134556678899999999999999999999987

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.82  E-value=1.5e-20  Score=129.09  Aligned_cols=122  Identities=28%  Similarity=0.407  Sum_probs=83.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.............++..|++||++.+..++.++||||||++++++++ |..||........  ....
T Consensus       170 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~~~  247 (293)
T cd05053         170 VMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL--FKLL  247 (293)
T ss_pred             eEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHH--HHHH
Confidence            479999999987643221111122334567999999888889999999999999999997 8888865332211  1100


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                      .....  .                ..+...+..+.+|+.+||..+|++|||+++++++|..+.
T Consensus       248 ~~~~~--~----------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         248 KEGYR--M----------------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             HcCCc--C----------------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            00000  0                001122345889999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.82  E-value=6.5e-21  Score=134.86  Aligned_cols=118  Identities=18%  Similarity=0.305  Sum_probs=86.8

Q ss_pred             CceeeecccccccccCCCCc-----------cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccc
Q 043981            1 MVAHLSDFSIAKLLTGEDQS-----------MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEI   69 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~-----------~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~   69 (161)
                      +++||+|||.|..+......           .....++||..|.+||++.....+..+|+|+|||++|.|+.|++||.+.
T Consensus       211 mhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~  290 (604)
T KOG0592|consen  211 GHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA  290 (604)
T ss_pred             CcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc
Confidence            57999999999987542221           1225589999999999999999999999999999999999999999663


Q ss_pred             cccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           70 FNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      .+. ..+...                +...+.+    +..-++.+.+|+.+.|..||.+|+|++++.+|.
T Consensus       291 Ney-liFqkI----------------~~l~y~f----p~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp  339 (604)
T KOG0592|consen  291 NEY-LIFQKI----------------QALDYEF----PEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP  339 (604)
T ss_pred             cHH-HHHHHH----------------HHhcccC----CCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence            221 111111                0011111    112234588999999999999999999998874

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.82  E-value=1.6e-20  Score=136.75  Aligned_cols=117  Identities=21%  Similarity=0.185  Sum_probs=82.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.+............+||+.|++||++.+..++.++||||+|++++++++|..||.......  +.....
T Consensus       207 ~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~--~~~~~~  284 (478)
T PTZ00267        207 IIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE--IMQQVL  284 (478)
T ss_pred             cEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHH
Confidence            579999999987643322222345679999999999988889999999999999999999999986532211  110000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .....                  +.+...+..+.+|+.+||..||++||++.+++.+
T Consensus       285 ~~~~~------------------~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~  323 (478)
T PTZ00267        285 YGKYD------------------PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT  323 (478)
T ss_pred             hCCCC------------------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence            00000                  0011233458899999999999999999999765

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.82  E-value=2.4e-20  Score=131.33  Aligned_cols=134  Identities=18%  Similarity=0.109  Sum_probs=83.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....   .......||..|+|||++.+..++.++|+||+|++++++++|+.||.+...... +.....
T Consensus       157 ~~kl~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~  232 (355)
T cd07874         157 TLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIE  232 (355)
T ss_pred             CEEEeeCcccccCCCc---cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH
Confidence            5899999999865321   122345789999999999888899999999999999999999999976432111 000000


Q ss_pred             hhc-C-------------------CCCccccccccccchhh--hhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DWL-P-------------------ISTMEVVDVNLLSQEDI--HFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~~-~-------------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ... +                   .................  ...........+.+|+.+||..||++|||+.++++|-
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp  312 (355)
T cd07874         233 QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHP  312 (355)
T ss_pred             HhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCc
Confidence            000 0                   00000000000000000  0001112245678999999999999999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.82  E-value=1.9e-20  Score=127.79  Aligned_cols=124  Identities=23%  Similarity=0.318  Sum_probs=86.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.............++..|++||++.+..++.++||||+|++++++++ |+.||......  .+....
T Consensus       155 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~  232 (280)
T cd05043         155 QVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF--EMAAYL  232 (280)
T ss_pred             cEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH--HHHHHH
Confidence            579999999987643222111122345677999999988889999999999999999998 99998653221  121111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      ......                  .....++..+.+++.+||..+|++|||+.+++..|..+.+.
T Consensus       233 ~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~  279 (280)
T cd05043         233 KDGYRL------------------AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ  279 (280)
T ss_pred             HcCCCC------------------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence            110000                  00112234588999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.81  E-value=4.5e-21  Score=139.87  Aligned_cols=116  Identities=27%  Similarity=0.400  Sum_probs=87.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC--CCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR--VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~--~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      ++||+|||-++.+-+  -......+.||..|||||++..++  |..++|||||||.+.||.+|++||....+-...+.  
T Consensus       714 vlKISDFGTsKRLAg--inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMF--  789 (1226)
T KOG4279|consen  714 VLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMF--  789 (1226)
T ss_pred             eEEecccccchhhcc--CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhh--
Confidence            479999999887632  222345688999999999997654  99999999999999999999999965332211111  


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVT  137 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~  137 (161)
                                .      ...+..+.+.+...+.+..+|+.+|+.+||.+||+|++++.
T Consensus       790 ----------k------VGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  790 ----------K------VGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             ----------h------hcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence                      0      01122344456777888999999999999999999999875

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.81  E-value=8.9e-21  Score=128.53  Aligned_cols=115  Identities=26%  Similarity=0.234  Sum_probs=81.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      +++|+|||+++......  ...+.++||+.|||||++.+..|+..+|.||+|+++|+|++|..||........     ..
T Consensus       163 Hi~LtDFgL~k~~~~~~--~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~-----~~  235 (357)
T KOG0598|consen  163 HIKLTDFGLCKEDLKDG--DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKM-----YD  235 (357)
T ss_pred             cEEEeccccchhcccCC--CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHH-----HH
Confidence            68999999998643322  234558999999999999999999999999999999999999999976433211     11


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC----CHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI----NAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp----s~~~vl~~  138 (161)
                      ......        ...       .+.-...+.++++.+.|..||++|.    .+.++..|
T Consensus       236 ~I~~~k--------~~~-------~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~H  281 (357)
T KOG0598|consen  236 KILKGK--------LPL-------PPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRH  281 (357)
T ss_pred             HHhcCc--------CCC-------CCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcC
Confidence            111000        000       0111334578999999999999996    45554443

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.81  E-value=1.7e-20  Score=130.16  Aligned_cols=126  Identities=22%  Similarity=0.336  Sum_probs=87.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.............++..|++||++....++.++||||||+++|++++ |..||.......  +....
T Consensus       147 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~--~~~~~  224 (316)
T cd05108         147 HVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSIL  224 (316)
T ss_pred             cEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHH
Confidence            579999999987643322222222334668999999988889999999999999999997 889986532221  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                      .....  .                +.+..++..+.+++.+||..+|.+|||+.+++.+|..+.....
T Consensus       225 ~~~~~--~----------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~  273 (316)
T cd05108         225 EKGER--L----------------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ  273 (316)
T ss_pred             hCCCC--C----------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCc
Confidence            10000  0                0011223347889999999999999999999999998876543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.81  E-value=6.5e-20  Score=130.53  Aligned_cols=138  Identities=17%  Similarity=0.032  Sum_probs=83.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccc------cc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEE------MT   75 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~------~~   75 (161)
                      .+||+|||+++..... .........||+.|++||++.+..++.++||||+|++++++++|..|+.......      ..
T Consensus       220 ~vkL~DFG~a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~  298 (391)
T PHA03212        220 DVCLGDFGAACFPVDI-NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQ  298 (391)
T ss_pred             CEEEEeCCcccccccc-cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHH
Confidence            4799999999754221 1112234579999999999988889999999999999999999998765432111      11


Q ss_pred             hhHHhhhhc--CCCCc----ccccc-------c-cccchhhh-hhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           76 LKHWVNDWL--PISTM----EVVDV-------N-LLSQEDIH-FVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        76 ~~~~~~~~~--~~~~~----~~~~~-------~-~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      +........  +....    .....       . ........ .......+..+.+|+.+||++||.+|||++++++|-.
T Consensus       299 l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~  378 (391)
T PHA03212        299 IKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAA  378 (391)
T ss_pred             HHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChh
Confidence            111111000  00000    00000       0 00000000 0011234567889999999999999999999998754

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.81  E-value=3.8e-20  Score=129.22  Aligned_cols=134  Identities=21%  Similarity=0.274  Sum_probs=85.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....    ......|+..|+|||++.+..++.++||||+|++++++++|+.||.......  +.....
T Consensus       142 ~~kl~Dfg~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~--~~~~~~  215 (331)
T cd06649         142 EIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE--LEAIFG  215 (331)
T ss_pred             cEEEccCccccccccc----ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhc
Confidence            4799999998765321    1234568999999999988889999999999999999999999996543221  111000


Q ss_pred             hhc-------CCCC-------cccc-----ccccc----------cchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH
Q 043981           82 DWL-------PIST-------MEVV-----DVNLL----------SQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA  132 (161)
Q Consensus        82 ~~~-------~~~~-------~~~~-----~~~~~----------~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~  132 (161)
                      ...       +...       ....     +....          .....+.......+.++.+|+.+||++||++|||+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~  295 (331)
T cd06649         216 RPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADL  295 (331)
T ss_pred             ccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCH
Confidence            000       0000       0000     00000          00000000011245678999999999999999999


Q ss_pred             HHHHHHHHH
Q 043981          133 KEIVTKLLK  141 (161)
Q Consensus       133 ~~vl~~l~~  141 (161)
                      .+++.|-.-
T Consensus       296 ~ell~h~~~  304 (331)
T cd06649         296 KMLMNHTFI  304 (331)
T ss_pred             HHHhcChHH
Confidence            999999754

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.81  E-value=3.2e-20  Score=131.12  Aligned_cols=135  Identities=17%  Similarity=0.110  Sum_probs=84.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....   .......|+..|+|||++.+..++.++||||+|++++++++|+.||........ +.....
T Consensus       164 ~~kL~DfG~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-~~~~~~  239 (364)
T cd07875         164 TLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIE  239 (364)
T ss_pred             cEEEEeCCCccccCCC---CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH
Confidence            5899999999865321   122345789999999999888899999999999999999999999976433211 110000


Q ss_pred             hhcCCC------C----ccccc----------cccccchhh--hhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DWLPIS------T----MEVVD----------VNLLSQEDI--HFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~------~----~~~~~----------~~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ......      .    .....          .........  ...........+.+|+.+||+.||.+|||+.++++|-
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp  319 (364)
T cd07875         240 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP  319 (364)
T ss_pred             hcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence            000000      0    00000          000000000  0000111234678999999999999999999999984


Q ss_pred             H
Q 043981          140 L  140 (161)
Q Consensus       140 ~  140 (161)
                      .
T Consensus       320 ~  320 (364)
T cd07875         320 Y  320 (364)
T ss_pred             c
Confidence            3

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.81  E-value=5.3e-20  Score=125.98  Aligned_cols=133  Identities=18%  Similarity=0.133  Sum_probs=83.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......   ......|+..|+|||++.+..++.++||||+|++++++++|..||........ +.....
T Consensus       146 ~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~-~~~~~~  221 (288)
T cd07863         146 QVKLADFGLARIYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ-LGKIFD  221 (288)
T ss_pred             CEEECccCccccccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHH-HHHHHH
Confidence            47999999998763221   12335688899999999888899999999999999999999999865433211 111110


Q ss_pred             hh---cCCCCccccc--cccccchh--hhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DW---LPISTMEVVD--VNLLSQED--IHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~---~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ..   ..........  ........  ......+..+..+.+++.+||++||++|||+.+++.|
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h  285 (288)
T cd07863         222 LIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH  285 (288)
T ss_pred             HhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            00   0000000000  00000000  0000112344567899999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.81  E-value=4.1e-20  Score=131.83  Aligned_cols=124  Identities=19%  Similarity=0.365  Sum_probs=86.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|++||++.+..++.++||||||++++++++ |..||........... ..
T Consensus       275 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~-~~  353 (400)
T cd05105         275 IVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYN-KI  353 (400)
T ss_pred             EEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHH-HH
Confidence            479999999987543222222233456778999999988889999999999999999997 8888865332211111 00


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                      ....                  ........+..+.+++.+||+.+|++|||+.++.+.|+++..
T Consensus       354 ~~~~------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         354 KSGY------------------RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             hcCC------------------CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence            0000                  000112334568899999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.81  E-value=2.5e-20  Score=127.17  Aligned_cols=125  Identities=23%  Similarity=0.358  Sum_probs=85.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.............++..|++||...+..++.++||||||++++|+++ |..||.......  +....
T Consensus       147 ~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~  224 (279)
T cd05109         147 HVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE--IPDLL  224 (279)
T ss_pred             cEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHH
Confidence            479999999987643222111122234668999999988889999999999999999998 888886532211  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      ......                  .....++..+.+++.+||..||+.||++.+++..|.++....
T Consensus       225 ~~~~~~------------------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05109         225 EKGERL------------------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP  272 (279)
T ss_pred             HCCCcC------------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence            110000                  001123345789999999999999999999999988776544

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.81  E-value=4e-20  Score=127.64  Aligned_cols=126  Identities=21%  Similarity=0.339  Sum_probs=81.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh--cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT--GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~--g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++.+.............++..|++||++....++.++||||||++++++++  +..||.......  ....
T Consensus       176 ~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~--~~~~  253 (304)
T cd05096         176 TIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQ--VIEN  253 (304)
T ss_pred             cEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHH--HHHH
Confidence            589999999987543222222233456788999999888889999999999999999987  456765533221  1111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ............. .          ..+..++..+.+|+.+||+.||++|||+.++.+.|+
T Consensus       254 ~~~~~~~~~~~~~-~----------~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         254 AGEFFRDQGRQVY-L----------FRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             HHHHhhhcccccc-c----------cCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            1111000000000 0          001223455889999999999999999999988875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.81  E-value=1.6e-20  Score=127.93  Aligned_cols=119  Identities=26%  Similarity=0.442  Sum_probs=81.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+..............+..|++||++.+..++.++||||+|++++++++ |..||.......  +....
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~--~~~~~  234 (277)
T cd05036         157 VAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE--VMEFV  234 (277)
T ss_pred             ceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHH
Confidence            479999999987632211111112234567999999988889999999999999999997 888987543321  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      .......                  .+...+..+.+++.+||+.+|++|||+.++++||.
T Consensus       235 ~~~~~~~------------------~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         235 TGGGRLD------------------PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             HcCCcCC------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            1100000                  01122345889999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.81  E-value=3.3e-20  Score=126.00  Aligned_cols=121  Identities=19%  Similarity=0.316  Sum_probs=83.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.............++..|++||+..+..++.++|+||+|++++++++ |+.||......  ......
T Consensus       150 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~  227 (272)
T cd05075         150 NVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--EIYDYL  227 (272)
T ss_pred             CEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHH
Confidence            579999999987643222111222346678999999988889999999999999999998 78888653221  111111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ......                  ......+..+.+++.+||+.+|++|||+.+++++|..+
T Consensus       228 ~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         228 RQGNRL------------------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             HcCCCC------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            110000                  00112234478999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.81  E-value=2.2e-20  Score=133.15  Aligned_cols=139  Identities=18%  Similarity=0.095  Sum_probs=86.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccc--cchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEE--MTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~--~~~~~~   79 (161)
                      .+||+|||+++.+.............||..|++||++.+..++.++||||+|++++++++|+.||.+.....  ..+...
T Consensus       223 ~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i  302 (392)
T PHA03207        223 NAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSI  302 (392)
T ss_pred             CEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHH
Confidence            479999999987643322222234579999999999988889999999999999999999999986644321  111111


Q ss_pred             hhhhc--CCCCccc--------cc-cccccchhhhh---hhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           80 VNDWL--PISTMEV--------VD-VNLLSQEDIHF---VAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        80 ~~~~~--~~~~~~~--------~~-~~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      .....  +......        +. ...........   ......+..+.+++.+||.+||++|||+.+++.|-.
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~  377 (392)
T PHA03207        303 IRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPL  377 (392)
T ss_pred             HHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCch
Confidence            11110  0000000        00 00000000000   000122345788999999999999999999999854

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.81  E-value=1.5e-20  Score=134.42  Aligned_cols=129  Identities=20%  Similarity=0.340  Sum_probs=95.9

Q ss_pred             CceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh--cCCCCccccccccchhH
Q 043981            1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT--GKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~--g~~p~~~~~~~~~~~~~   78 (161)
                      |++||+|||++|.+.....+..+.+.+-++.|||+|.+.-..+++++|+|+||+.+||+++  ...||.....+..  .+
T Consensus       674 ~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v--ve  751 (807)
T KOG1094|consen  674 FTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV--VE  751 (807)
T ss_pred             ccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH--HH
Confidence            6899999999998766556666677788999999999988899999999999999999987  6788866544321  11


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ......+...           .......++.++..+.++|.+||.++..+|||++++..+|++.
T Consensus       752 n~~~~~~~~~-----------~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  752 NAGEFFRDQG-----------RQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             hhhhhcCCCC-----------cceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            1111111110           0011112456777788999999999999999999999999865

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.81  E-value=3.7e-20  Score=127.75  Aligned_cols=136  Identities=16%  Similarity=0.136  Sum_probs=81.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++......  .......++..|+|||++.+. .++.++|+||+|++++++++|..||.........+....
T Consensus       141 ~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~  218 (303)
T cd07869         141 ELKLADFGLARAKSVPS--HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIF  218 (303)
T ss_pred             CEEECCCCcceeccCCC--ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHH
Confidence            47999999987543211  122335688999999988654 478889999999999999999999976433222111111


Q ss_pred             hhhcCCC---Ccc-----cccccc---ccchhhhh-hhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           81 NDWLPIS---TME-----VVDVNL---LSQEDIHF-VAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        81 ~~~~~~~---~~~-----~~~~~~---~~~~~~~~-~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      .......   ...     ......   ........ .........+.+|+.+||+.||++|||+++++.|-
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~  289 (303)
T cd07869         219 LVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHE  289 (303)
T ss_pred             HHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCc
Confidence            1100000   000     000000   00000000 00001224578999999999999999999999864

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.80  E-value=3.3e-20  Score=126.65  Aligned_cols=119  Identities=26%  Similarity=0.466  Sum_probs=81.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.............++..|++||+..+..++.++|+||||++++++++ |..||........ .. ..
T Consensus       160 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-~~-~~  237 (280)
T cd05092         160 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA-IE-CI  237 (280)
T ss_pred             CEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH-HH-HH
Confidence            579999999976543222112223345678999999988889999999999999999998 8888854322111 10 00


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ....+.                  ..+..++..+.+++.+||+.||.+||++.++...|+
T Consensus       238 ~~~~~~------------------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         238 TQGREL------------------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             HcCccC------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            000000                  001122345789999999999999999999998876

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.80  E-value=2.8e-20  Score=127.52  Aligned_cols=134  Identities=17%  Similarity=0.108  Sum_probs=82.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++......  .......++..|+|||++.+ ..++.++|+||+|++++++++|+.||........ +....
T Consensus       141 ~~kl~DfG~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~-~~~~~  217 (288)
T cd07871         141 ELKLADFGLARAKSVPT--KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE-LHLIF  217 (288)
T ss_pred             CEEECcCcceeeccCCC--ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH
Confidence            47999999997643211  12233568899999998865 4588999999999999999999999976443221 11110


Q ss_pred             hhhc---CCCCcccc-----ccccccchh--hhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWL---PISTMEVV-----DVNLLSQED--IHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~---~~~~~~~~-----~~~~~~~~~--~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ....   ........     .........  ...........++.+|+.+||++||.+|||++|+++|
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h  285 (288)
T cd07871         218 RLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH  285 (288)
T ss_pred             HHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence            0000   00000000     000000000  0000011234568899999999999999999999976

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.80  E-value=6.1e-20  Score=126.69  Aligned_cols=125  Identities=26%  Similarity=0.365  Sum_probs=86.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.............++..|++||++.+..++.++||||+|++++++++ |..||.......  +....
T Consensus       175 ~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~  252 (304)
T cd05101         175 VMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFKLL  252 (304)
T ss_pred             cEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHH
Confidence            479999999987643222212222345678999999988889999999999999999998 777775432211  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      .....                  ......++..+.+++.+||..+|.+|||+.++++.|.++..-.
T Consensus       253 ~~~~~------------------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~  300 (304)
T cd05101         253 KEGHR------------------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLT  300 (304)
T ss_pred             HcCCc------------------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhh
Confidence            10000                  0001233456889999999999999999999999999987643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.80  E-value=3.7e-20  Score=126.75  Aligned_cols=118  Identities=18%  Similarity=0.238  Sum_probs=82.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......   ......|+..|+|||++.+..++.++||||+|++++++++|+.||......... .....
T Consensus       140 ~~kl~Dfg~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~-~~~~~  215 (285)
T cd05631         140 HIRISDLGLAVQIPEGE---TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKR-EEVDR  215 (285)
T ss_pred             CEEEeeCCCcEEcCCCC---eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhH-HHHHH
Confidence            47999999998753221   123457899999999998888999999999999999999999999764432110 00000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCC-----HHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRIN-----AKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~vl~~l  139 (161)
                      ..... .           .    ......+..+.+|+.+||..||.+||+     ++++++|-
T Consensus       216 ~~~~~-~-----------~----~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~  262 (285)
T cd05631         216 RVKED-Q-----------E----EYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHP  262 (285)
T ss_pred             Hhhcc-c-----------c----cCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCH
Confidence            00000 0           0    001123445889999999999999997     88998874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.80  E-value=1.6e-20  Score=128.79  Aligned_cols=68  Identities=29%  Similarity=0.434  Sum_probs=59.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNE   72 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~   72 (161)
                      ++||+|||+||.+..   .......+|++.|||||++...+|+.++|+||.|+++|++++|+.||......
T Consensus       153 ~LKIADFGfAR~L~~---~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~  220 (429)
T KOG0595|consen  153 VLKIADFGFARFLQP---GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPK  220 (429)
T ss_pred             eEEecccchhhhCCc---hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHH
Confidence            579999999999853   22345689999999999999899999999999999999999999999865543

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.80  E-value=2.3e-20  Score=130.42  Aligned_cols=138  Identities=18%  Similarity=0.185  Sum_probs=82.7

Q ss_pred             ceeeecccccccccCCCC-ccccccccccccccCCCCCCC--CCCCCCccchhhhHHHHHHHhcCCCCcccccccc-chh
Q 043981            2 VAHLSDFSIAKLLTGEDQ-SMTQTQTLATIGYMAPEYGRE--GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM-TLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~-~~~~~~~~g~~~~~~Pe~~~~--~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~-~~~   77 (161)
                      .+||+|||+++....... ........|+..|+|||++.+  ..++.++||||+|++++++++|+.||........ ...
T Consensus       141 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~  220 (338)
T cd07859         141 KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLI  220 (338)
T ss_pred             cEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHH
Confidence            589999999986532211 112234578999999998865  4688999999999999999999999965432111 000


Q ss_pred             HHhhhhcCCCC---------ccccccccccchhhhh-hhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           78 HWVNDWLPIST---------MEVVDVNLLSQEDIHF-VAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        78 ~~~~~~~~~~~---------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ......++...         ...... ......... ......+..+.+++.+||+.||++|||+++++.|-.
T Consensus       221 ~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~  292 (338)
T cd07859         221 TDLLGTPSPETISRVRNEKARRYLSS-MRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPY  292 (338)
T ss_pred             HHHhCCCCHHHHHHhhhhhHHHHHHh-hcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCch
Confidence            00000000000         000000 000000000 000123455789999999999999999999998843

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.80  E-value=6.2e-20  Score=125.43  Aligned_cols=120  Identities=28%  Similarity=0.461  Sum_probs=83.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|++||++.+..++.++|+||+|++++++++ |..||......  ......
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~--~~~~~~  239 (283)
T cd05090         162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ--EVIEMV  239 (283)
T ss_pred             cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHH
Confidence            579999999987643322222233456678999999987789999999999999999998 88888653221  111111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ......                  ..+..++..+.+++.+||+.||++||++.+++++|.+
T Consensus       240 ~~~~~~------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         240 RKRQLL------------------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             HcCCcC------------------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            110000                  0011233458889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.80  E-value=4.6e-20  Score=126.50  Aligned_cols=123  Identities=25%  Similarity=0.389  Sum_probs=85.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|++||.+.+..++.++||||||++++++++ |..||......  .+....
T Consensus       165 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~  242 (290)
T cd05045         165 KMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE--RLFNLL  242 (290)
T ss_pred             cEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHH
Confidence            479999999986543222222223345678999999887789999999999999999998 88898653322  111111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                      .....                  .......+..+.+++..||+.+|++||++++++..|+++..
T Consensus       243 ~~~~~------------------~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~  288 (290)
T cd05045         243 KTGYR------------------MERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV  288 (290)
T ss_pred             hCCCC------------------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence            11000                  00011233458899999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.80  E-value=4.6e-20  Score=125.71  Aligned_cols=119  Identities=24%  Similarity=0.439  Sum_probs=81.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|++||++.+..++.++|+||||++++++++ |..||.......  .....
T Consensus       157 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~--~~~~~  234 (277)
T cd05062         157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ--VLRFV  234 (277)
T ss_pred             CEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHH
Confidence            579999999876532222111122345778999999988889999999999999999998 678876533221  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ....   .   ..            .+...+..+.+++.+||+.+|++|||+.+++.+|+
T Consensus       235 ~~~~---~---~~------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         235 MEGG---L---LD------------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             HcCC---c---CC------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            0000   0   00            01122345889999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.80  E-value=3.1e-20  Score=129.22  Aligned_cols=114  Identities=21%  Similarity=0.268  Sum_probs=81.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.......  ......||+.|+|||++.+..++.++||||+|++++++++|..||.......  ......
T Consensus       133 ~~kl~DfG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~--~~~~~~  208 (323)
T cd05571         133 HIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--LFELIL  208 (323)
T ss_pred             CEEEeeCCCCcccccCCC--cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH--HHHHHH
Confidence            479999999876422111  2234679999999999988889999999999999999999999996533211  110000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~  138 (161)
                         ...    .        .    .+...+..+.+|+.+||+.||++||     ++.+++.|
T Consensus       209 ---~~~----~--------~----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h  251 (323)
T cd05571         209 ---MEE----I--------R----FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH  251 (323)
T ss_pred             ---cCC----C--------C----CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence               000    0        0    0112344588999999999999999     79999877

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.80  E-value=3.5e-21  Score=141.22  Aligned_cols=125  Identities=22%  Similarity=0.426  Sum_probs=94.3

Q ss_pred             CceeeecccccccccCCCC-ccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhH
Q 043981            1 MVAHLSDFSIAKLLTGEDQ-SMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~-~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~   78 (161)
                      +++||+|||++|.+..+.+ ........=++.|.|||.+....++.++||||||+++||+++ |..||=...+.+  .+.
T Consensus       768 LvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd--VIk  845 (996)
T KOG0196|consen  768 LVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD--VIK  845 (996)
T ss_pred             eEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH--HHH
Confidence            4689999999998743321 111111222578999999999999999999999999999887 889974433221  111


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                                        ....+++.+.+.+|+..+..||..||+.|-.+||.+.+++.+|.++..+
T Consensus       846 ------------------aIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn  894 (996)
T KOG0196|consen  846 ------------------AIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN  894 (996)
T ss_pred             ------------------HHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence                              1223445555678888899999999999999999999999999999864

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.80  E-value=1.1e-19  Score=126.03  Aligned_cols=69  Identities=17%  Similarity=0.224  Sum_probs=53.7

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCcccc
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIF   70 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~   70 (161)
                      .+||+|||+++........ .......||..|+|||++.+. .++.++||||+|++++++++|+.||....
T Consensus       150 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~  220 (317)
T cd07867         150 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ  220 (317)
T ss_pred             cEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccccc
Confidence            4899999999876432221 122345788999999998764 47889999999999999999999986543

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.80  E-value=6.6e-20  Score=126.71  Aligned_cols=126  Identities=26%  Similarity=0.358  Sum_probs=85.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|++||++.+..++.++|+||+|++++++++ |..||.....+.  +....
T Consensus       178 ~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~--~~~~~  255 (307)
T cd05098         178 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--LFKLL  255 (307)
T ss_pred             cEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH--HHHHH
Confidence            479999999876532111111111234567999999988889999999999999999998 778875432211  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                      .....                  .......+..+.+++.+||..+|..|||+.+++.+|.++.....
T Consensus       256 ~~~~~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~  304 (307)
T cd05098         256 KEGHR------------------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTS  304 (307)
T ss_pred             HcCCC------------------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhh
Confidence            10000                  00011234468899999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.80  E-value=6.1e-20  Score=124.25  Aligned_cols=120  Identities=25%  Similarity=0.394  Sum_probs=82.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++........ ......++..|++||++.+..++.++||||||++++++++ |..||.....+.  .....
T Consensus       142 ~~kl~df~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~--~~~~~  218 (263)
T cd05052         142 LVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELL  218 (263)
T ss_pred             cEEeCCCccccccccceee-ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHH
Confidence            4799999999876432111 1112234567999999988889999999999999999998 888886533221  11100


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ....+        .          ..+...+..+.+++.+||..+|++|||+.++++.|+.+
T Consensus       219 ~~~~~--------~----------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         219 EKGYR--------M----------ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             HCCCC--------C----------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            00000        0          00122345688999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.80  E-value=2e-20  Score=134.12  Aligned_cols=113  Identities=24%  Similarity=0.336  Sum_probs=88.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .|||+|+|+|+.+..    .+..+.+|||.|||||+.. ..|+..+||||||++++||+|+..||..+.+--+.+.....
T Consensus       184 ~VKIGDLGLAtl~r~----s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~S  258 (632)
T KOG0584|consen  184 EVKIGDLGLATLLRK----SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTS  258 (632)
T ss_pred             ceeecchhHHHHhhc----cccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHc
Confidence            489999999998742    2345589999999999987 78999999999999999999999999877665554444333


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...|..+..                  -..+++++||.+||.. ...|+|+.|+|.+
T Consensus       259 GiKP~sl~k------------------V~dPevr~fIekCl~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  259 GIKPAALSK------------------VKDPEVREFIEKCLAT-KSERLSAKELLKD  296 (632)
T ss_pred             CCCHHHhhc------------------cCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence            333332211                  2234588999999999 9999999999876

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.80  E-value=1.3e-19  Score=122.93  Aligned_cols=119  Identities=26%  Similarity=0.466  Sum_probs=82.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|++||++.+..++.++||||||++++++++ |..||.......  .....
T Consensus       149 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~--~~~~~  226 (269)
T cd05044         149 VVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE--VLQHV  226 (269)
T ss_pred             ceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH--HHHHH
Confidence            589999999986543222111222345678999999988889999999999999999998 899986432211  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ....                  ........+..+.+++.+||..+|.+||++.++++.|+
T Consensus       227 ~~~~------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         227 TAGG------------------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             hcCC------------------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            0000                  00001233456889999999999999999999999886

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.79  E-value=9.5e-20  Score=125.27  Aligned_cols=124  Identities=15%  Similarity=0.157  Sum_probs=84.2

Q ss_pred             ceeeecccccccccCCCCc-----cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQS-----MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-----~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||+|+.+......     .......||+.|++||+..+..++.++||||+|++++++++|+.||..........
T Consensus       164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~  243 (294)
T PHA02882        164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI  243 (294)
T ss_pred             cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence            4789999999876432211     11123469999999999988889999999999999999999999997653322211


Q ss_pred             hHHhhhh-cCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           77 KHWVNDW-LPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        77 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ....... .....     .    .  .   ....++..+.+++..||..+|++||++.++++.+
T Consensus       244 ~~~~~~~~~~~~~-----~----~--~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        244 HAAKCDFIKRLHE-----G----K--I---KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             HHhHHHHHHHhhh-----h----h--h---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            1110000 00000     0    0  0   0112345688999999999999999999998765

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.79  E-value=1.6e-19  Score=120.17  Aligned_cols=127  Identities=16%  Similarity=0.118  Sum_probs=98.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+|+.-.   ......+.+.|++|.|||++....|+..+|+||+|+++|-++.|..||.........      
T Consensus       202 ~lKLtDfGFAK~t~---~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ais------  272 (400)
T KOG0604|consen  202 PLKLTDFGFAKETQ---EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS------  272 (400)
T ss_pred             ceEecccccccccC---CCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCC------
Confidence            57999999998742   223345678999999999998888999999999999999999999999764332110      


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                             ...-......++.++.+.....++..+++++++|.-+|.+|.|+.+++.|-+-.+.
T Consensus       273 -------pgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~  328 (400)
T KOG0604|consen  273 -------PGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY  328 (400)
T ss_pred             -------hhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence                   00011122345556666678889999999999999999999999999998776654

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.79  E-value=1.2e-19  Score=125.84  Aligned_cols=128  Identities=27%  Similarity=0.362  Sum_probs=86.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|++||++.+..++.++|+||+|++++++++ |..||.....+.  .....
T Consensus       172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~--~~~~~  249 (314)
T cd05099         172 VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE--LFKLL  249 (314)
T ss_pred             cEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence            479999999986532211111112234467999999888889999999999999999998 788875532211  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRN  149 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~  149 (161)
                      .....  .                .....++..+.+++.+||..+|+.|||+.+++..|.++.......
T Consensus       250 ~~~~~--~----------------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~  300 (314)
T cd05099         250 REGHR--M----------------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSEE  300 (314)
T ss_pred             HcCCC--C----------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcCC
Confidence            10000  0                001122345789999999999999999999999999998765443

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.79  E-value=1.3e-19  Score=122.76  Aligned_cols=121  Identities=26%  Similarity=0.439  Sum_probs=83.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|++||.+.+..++.++||||+|++++++++ |..||.......  .....
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~--~~~~~  221 (266)
T cd05033         144 VCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD--VIKAV  221 (266)
T ss_pred             CEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH--HHHHH
Confidence            479999999988642222111122345678999999988889999999999999999997 888885432211  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ......                  +....++..+.+++.+||+.+|++||++.+++++|.++
T Consensus       222 ~~~~~~------------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         222 EDGYRL------------------PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             HcCCCC------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            100000                  00112334588999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.79  E-value=1.1e-19  Score=125.35  Aligned_cols=122  Identities=20%  Similarity=0.364  Sum_probs=83.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+|++|||+++...............++..|++||++.+..++.++||||+|++++++++ |..||........ +....
T Consensus       179 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~-~~~~~  257 (302)
T cd05055         179 IVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK-FYKLI  257 (302)
T ss_pred             eEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH-HHHHH
Confidence            478999999986643222111222345678999999988889999999999999999998 8899865432211 11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ....+.                  ......+..+.+++.+||..+|++|||+.+++..|.++
T Consensus       258 ~~~~~~------------------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         258 KEGYRM------------------AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             HcCCcC------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            100000                  00111234588999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.79  E-value=1.3e-19  Score=123.81  Aligned_cols=136  Identities=17%  Similarity=0.248  Sum_probs=86.0

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+...... .......++..|++||.+....++.++||||+|++++++++|..|+..............
T Consensus       145 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~  224 (283)
T cd05080         145 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPK  224 (283)
T ss_pred             cEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccc
Confidence            4799999999876432211 111223456679999998877899999999999999999999999755332111111000


Q ss_pred             h-hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           81 N-DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        81 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                      . .............      ....+.+...+..+.+++.+||+.+|++|||+++++..|+++.
T Consensus       225 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         225 QGQMTVVRLIELLER------GMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             ccccchhhhhhhhhc------CCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            0 0000000000000      0000112234466899999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.79  E-value=1.2e-19  Score=126.80  Aligned_cols=135  Identities=19%  Similarity=0.240  Sum_probs=82.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHH--
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW--   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~--   79 (161)
                      .+||+|||+++.+...    ......|+..|++||++.+..++.++|+||+|++++++++|+.||.............  
T Consensus       142 ~~kL~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~  217 (333)
T cd06650         142 EIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCP  217 (333)
T ss_pred             CEEEeeCCcchhhhhh----ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCc
Confidence            4799999998765321    1233568899999999988889999999999999999999999986543221110000  


Q ss_pred             hhhhcCCCC----cccc-------cccc--cc----------chhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHH
Q 043981           80 VNDWLPIST----MEVV-------DVNL--LS----------QEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIV  136 (161)
Q Consensus        80 ~~~~~~~~~----~~~~-------~~~~--~~----------~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl  136 (161)
                      .........    ....       .+..  ..          ....+.......+.++.+|+.+||++||++|||+.+++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell  297 (333)
T cd06650         218 VEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLM  297 (333)
T ss_pred             ccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHh
Confidence            000000000    0000       0000  00          00000000011235688999999999999999999998


Q ss_pred             HHHH
Q 043981          137 TKLL  140 (161)
Q Consensus       137 ~~l~  140 (161)
                      .|-.
T Consensus       298 ~h~~  301 (333)
T cd06650         298 VHAF  301 (333)
T ss_pred             hCHH
Confidence            8754

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.79  E-value=1.1e-19  Score=117.88  Aligned_cols=125  Identities=21%  Similarity=0.269  Sum_probs=86.3

Q ss_pred             ceeeecccccccccCCCCc-------cccccccccccccCCCCCCCC---CCCCCccchhhhHHHHHHHhcCCCCccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQS-------MTQTQTLATIGYMAPEYGREG---RVSANGDVYSFGIMLMETFTGKKPTDEIFN   71 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-------~~~~~~~g~~~~~~Pe~~~~~---~~~~~~dv~s~g~il~e~~~g~~p~~~~~~   71 (161)
                      .++|.|||.++...-....       .......+|..|+|||.+...   ..+.++||||+||++|++..|..||.....
T Consensus       167 ~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~  246 (302)
T KOG2345|consen  167 LPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ  246 (302)
T ss_pred             ceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh
Confidence            5789999998875321111       111235689999999988644   378999999999999999999999976444


Q ss_pred             cccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           72 EEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                      ....+.            -.+..     ..+..+.....++.+.+++..||+.||.+||++.+++.++..+.
T Consensus       247 ~GgSla------------LAv~n-----~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  247 QGGSLA------------LAVQN-----AQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             cCCeEE------------Eeeec-----cccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence            222111            00000     01111112235667899999999999999999999999998764

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.79  E-value=1e-19  Score=128.01  Aligned_cols=120  Identities=18%  Similarity=0.277  Sum_probs=79.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-----CCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-----GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-----~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||+++.+.....  ......|+..|++||++..     ...+.++||||||+++|++++|+.||......  .+
T Consensus       206 ~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--~~  281 (353)
T PLN00034        206 NVKIADFGVSRILAQTMD--PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG--DW  281 (353)
T ss_pred             CEEEcccccceecccccc--cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc--cH
Confidence            479999999987642211  1234578999999998743     22356899999999999999999998732211  11


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ...........               ........+..+.+|+.+||..||++|||+.++++|-.
T Consensus       282 ~~~~~~~~~~~---------------~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~  330 (353)
T PLN00034        282 ASLMCAICMSQ---------------PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPF  330 (353)
T ss_pred             HHHHHHHhccC---------------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence            11100000000               00001233456889999999999999999999999854

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.79  E-value=1.2e-20  Score=127.47  Aligned_cols=118  Identities=28%  Similarity=0.508  Sum_probs=78.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............+...|++||.+....++.++||||||+++||+++ ++.||.......  +....
T Consensus       141 ~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~--~~~~~  218 (259)
T PF07714_consen  141 QVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE--IIEKL  218 (259)
T ss_dssp             EEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH--HHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccc
Confidence            589999999987633222223333457778999999988789999999999999999999 678876542221  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      .....                  ...+..++..+.+++..||..+|++|||++++++.|
T Consensus       219 ~~~~~------------------~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  219 KQGQR------------------LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HTTEE------------------TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             ccccc------------------ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            11000                  001122344588999999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.79  E-value=2.6e-19  Score=125.57  Aligned_cols=125  Identities=21%  Similarity=0.355  Sum_probs=85.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|++||++.+..++.++|+||+|++++++++ |..||........... ..
T Consensus       217 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~  295 (343)
T cd05103         217 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR-RL  295 (343)
T ss_pred             cEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHH-HH
Confidence            579999999987533222222222345667999999888889999999999999999997 8888865322211111 00


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      ......        .  .        +...+..+.+++..||+.+|++|||+.+++++|+.+.+.
T Consensus       296 ~~~~~~--------~--~--------~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~  342 (343)
T cd05103         296 KEGTRM--------R--A--------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  342 (343)
T ss_pred             hccCCC--------C--C--------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            000000        0  0        011223478999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.79  E-value=1.4e-19  Score=127.34  Aligned_cols=119  Identities=19%  Similarity=0.182  Sum_probs=91.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+|++|||++.....   ....+..+||+.|+|||++.+..|+..+|+||+|+++|.|+.|..||.+............ 
T Consensus       177 ~ik~~DFGla~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~-  252 (382)
T KOG0032|consen  177 RIKLIDFGLAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILR-  252 (382)
T ss_pred             cEEEeeCCCceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHc-
Confidence            489999999988754   2345678999999999999988999999999999999999999999977554322221100 


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                                      ....+........+..+.+++..|+..||.+|+|+.++++|-|
T Consensus       253 ----------------~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpW  295 (382)
T KOG0032|consen  253 ----------------GDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPW  295 (382)
T ss_pred             ----------------CCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCcc
Confidence                            0011122224555677899999999999999999999999855

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.79  E-value=1.6e-19  Score=117.75  Aligned_cols=141  Identities=16%  Similarity=0.158  Sum_probs=93.2

Q ss_pred             ceeeecccccccccCCCC--ccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCcccccccc--ch
Q 043981            2 VAHLSDFSIAKLLTGEDQ--SMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEM--TL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~--~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~--~~   76 (161)
                      ++||+|||++|.+.....  ..+.+..+-|.+|++||.+.+.. |..+.|+|+-||++.||+++...+++..+...  .+
T Consensus       162 ilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~I  241 (376)
T KOG0669|consen  162 ILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLI  241 (376)
T ss_pred             eEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHH
Confidence            579999999988754322  22334566799999999888764 99999999999999999999999888666433  12


Q ss_pred             hHHhhhhcCCCCccccccccccc--------hhhhhhhh----HHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQ--------EDIHFVAK----EQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~----~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ...+....+..+.+.....+...        ...+...+    -....+..+|+..+|.+||.+|+++.+++.|-.-.
T Consensus       242 s~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~  319 (376)
T KOG0669|consen  242 SQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFW  319 (376)
T ss_pred             HHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhh
Confidence            22333333433333322111110        00000000    01123678999999999999999999999886443

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.79  E-value=3.6e-19  Score=120.59  Aligned_cols=123  Identities=18%  Similarity=0.235  Sum_probs=86.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .++|+|||++.......  .......++..|++||.+.+..++.++|+||+|++++++++|..||.........+.....
T Consensus       144 ~~~l~d~g~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~  221 (267)
T cd08228         144 VVKLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIE  221 (267)
T ss_pred             CEEECccccceeccchh--HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHh
Confidence            47899999988754221  1123356888999999998888899999999999999999999998653322211211111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                      ...                 .+.......+..+.+++.+||..+|++|||+.++++.++.+.
T Consensus       222 ~~~-----------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         222 QCD-----------------YPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             cCC-----------------CCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            000                 000001233455889999999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.79  E-value=1.1e-19  Score=125.43  Aligned_cols=126  Identities=22%  Similarity=0.381  Sum_probs=86.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.............++..|++||++.+..++.++||||||++++++++ |+.||.......  .....
T Consensus       147 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~--~~~~~  224 (303)
T cd05110         147 HVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE--IPDLL  224 (303)
T ss_pred             ceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence            479999999987643322222223445678999999988889999999999999999997 888886532211  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                      ......                  +.+..++..+.+++..||..+|++||++.+++..|.++.....
T Consensus       225 ~~~~~~------------------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~  273 (303)
T cd05110         225 EKGERL------------------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQ  273 (303)
T ss_pred             HCCCCC------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchh
Confidence            100000                  0011122347889999999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=8.3e-20  Score=132.31  Aligned_cols=117  Identities=21%  Similarity=0.300  Sum_probs=82.8

Q ss_pred             eeeecccccccccCCCCccccccccccccccCCCCCC-----CCCCCCCccchhhhHHHHHHHhcCCCCccccccccchh
Q 043981            3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR-----EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLK   77 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~-----~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~   77 (161)
                      ++|+|||++....  ........++||++|||||++-     ..+|+.++||||||+.+.||..+.+|.+...+....+.
T Consensus       169 irLADFGVSAKn~--~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllK  246 (1187)
T KOG0579|consen  169 IRLADFGVSAKNK--STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK  246 (1187)
T ss_pred             Eeeecccccccch--hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHH
Confidence            6899999986632  2233456799999999999874     45699999999999999999999999765433211111


Q ss_pred             HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           78 HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                       ...--+|                 ....+..-...+.+|+.+||..||..||++.++++|-
T Consensus       247 -iaKSePP-----------------TLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hp  290 (1187)
T KOG0579|consen  247 -IAKSEPP-----------------TLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHP  290 (1187)
T ss_pred             -HhhcCCC-----------------cccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCc
Confidence             0000011                 0111222344589999999999999999999999874

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.79  E-value=1.2e-19  Score=122.41  Aligned_cols=120  Identities=22%  Similarity=0.395  Sum_probs=82.6

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++.+...... .......++..|++||.+....++.++|+||||++++|+++ |..||......  .....
T Consensus       133 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~  210 (257)
T cd05116         133 YAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EVTQM  210 (257)
T ss_pred             eEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH
Confidence            4799999999876432221 11122234578999999887778999999999999999998 89998654321  11111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      .......                  ..+...+..+.+++.+||+.||+.||++.+|...|+.
T Consensus       211 i~~~~~~------------------~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         211 IESGERM------------------ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             HHCCCCC------------------CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence            1100000                  0012234558899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.79  E-value=1.9e-19  Score=123.89  Aligned_cols=123  Identities=20%  Similarity=0.277  Sum_probs=83.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||++.....   .........+..|++||+..+..++.++||||||++++++++ |..||........  ..  
T Consensus       157 ~~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~--~~--  229 (297)
T cd05089         157 ASKIADFGLSRGEEV---YVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAEL--YE--  229 (297)
T ss_pred             eEEECCcCCCccccc---eeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHH--HH--
Confidence            479999999864321   111111223457999999988889999999999999999997 9899865432211  10  


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                       ..... .              ....+...+..+.+|+.+||+.+|.+|||+.++++.|..+...-.
T Consensus       230 -~~~~~-~--------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~  280 (297)
T cd05089         230 -KLPQG-Y--------------RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARK  280 (297)
T ss_pred             -HHhcC-C--------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence             00000 0              000011233458899999999999999999999999998886443

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=1.4e-19  Score=126.86  Aligned_cols=134  Identities=16%  Similarity=0.099  Sum_probs=89.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccc-----ccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNE-----EMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~-----~~~~   76 (161)
                      .+||+|||.|....     .+.+.-+.|..|++|||+.+..|++.+||||++|+.||++||-..|.....+     +.++
T Consensus       392 ~vKIaDlGNACW~~-----khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHi  466 (590)
T KOG1290|consen  392 RVKIADLGNACWVH-----KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHI  466 (590)
T ss_pred             eEEEeeccchhhhh-----hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHH
Confidence            58999999998752     2334468899999999999999999999999999999999999988553221     1111


Q ss_pred             ---hHHhhhhcCC------CCcccc----------ccccccch---hhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHH
Q 043981           77 ---KHWVNDWLPI------STMEVV----------DVNLLSQE---DIHFVAKEQCVSFVFNLAMACTVESPEQRINAKE  134 (161)
Q Consensus        77 ---~~~~~~~~~~------~~~~~~----------~~~~~~~~---~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~  134 (161)
                         .+.....++.      ...+.+          ..+...-.   ......+.+...++.+|+.-||+++|++||||.+
T Consensus       467 A~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~  546 (590)
T KOG1290|consen  467 ALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQ  546 (590)
T ss_pred             HHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHH
Confidence               1111111110      000000          00000000   0011113566778999999999999999999999


Q ss_pred             HHHHHH
Q 043981          135 IVTKLL  140 (161)
Q Consensus       135 vl~~l~  140 (161)
                      .++|-+
T Consensus       547 cl~hPw  552 (590)
T KOG1290|consen  547 CLKHPW  552 (590)
T ss_pred             HhcCcc
Confidence            998755

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.79  E-value=1.7e-19  Score=126.02  Aligned_cols=125  Identities=26%  Similarity=0.365  Sum_probs=85.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|++||++.+..++.++||||+|++++++++ |..||.....+.  .....
T Consensus       172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~  249 (334)
T cd05100         172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE--LFKLL  249 (334)
T ss_pred             cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHH
Confidence            479999999987543221111122334567999999988889999999999999999998 778876532211  11100


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      .....  .                .....++..+.+++.+||+.+|.+|||+.+++.+|.++....
T Consensus       250 ~~~~~--~----------------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~  297 (334)
T cd05100         250 KEGHR--M----------------DKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT  297 (334)
T ss_pred             HcCCC--C----------------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence            00000  0                001122345889999999999999999999999999988543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.78  E-value=1.3e-19  Score=122.38  Aligned_cols=120  Identities=23%  Similarity=0.397  Sum_probs=82.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++........ ......++..|++||++.+..++.++|+||+|++++++++ |..||.......  .....
T Consensus       141 ~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~  217 (261)
T cd05072         141 MCKIADFGLARVIEDNEYT-AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD--VMSAL  217 (261)
T ss_pred             cEEECCCccceecCCCcee-ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH--HHHHH
Confidence            4789999999876432111 1122345678999999988888999999999999999998 889986533221  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ....+.                  +.....+..+.+++.+||..+|++|||++++.+.|+++
T Consensus       218 ~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         218 QRGYRM------------------PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             HcCCCC------------------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            000000                  00112234588999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.78  E-value=9.9e-20  Score=123.97  Aligned_cols=119  Identities=28%  Similarity=0.417  Sum_probs=82.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.............++..|++||.+....++.++||||||++++++++ |..||.......  .....
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~~  234 (277)
T cd05032         157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE--VLKFV  234 (277)
T ss_pred             CEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH--HHHHH
Confidence            579999999987543222112233456778999999887789999999999999999998 888886533221  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ......                  ..+...+..+.+++.+||+.+|++|||+.+++..|+
T Consensus       235 ~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         235 IDGGHL------------------DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             hcCCCC------------------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            100000                  001112455889999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.78  E-value=2.4e-19  Score=118.09  Aligned_cols=117  Identities=23%  Similarity=0.290  Sum_probs=86.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC---CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE---GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~---~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .+|+||||++-.+..   +.-.+...|-+.||+||.+.-   ..|+.++||||||+.+.|+.+|+.||.+.+.+-..+..
T Consensus       230 niKlCDFGIsGrlvd---SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltk  306 (391)
T KOG0983|consen  230 NIKLCDFGISGRLVD---SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTK  306 (391)
T ss_pred             CEEeecccccceeec---ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHH
Confidence            479999999977642   333455678889999998753   34999999999999999999999999987766555544


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .....+| .+.        .        ...-++.+.+|+..||..|+.+||.-.++++|
T Consensus       307 vln~ePP-~L~--------~--------~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h  349 (391)
T KOG0983|consen  307 VLNEEPP-LLP--------G--------HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH  349 (391)
T ss_pred             HHhcCCC-CCC--------c--------ccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence            3332221 110        0        01123458899999999999999999888876

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.78  E-value=3e-19  Score=127.39  Aligned_cols=123  Identities=22%  Similarity=0.338  Sum_probs=85.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|++||++....++.++|+||||++++|+++ |..||........... ..
T Consensus       277 ~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~-~~  355 (401)
T cd05107         277 LVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYN-AI  355 (401)
T ss_pred             EEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHH-HH
Confidence            479999999986532222111223456788999999988788999999999999999998 8888865332211111 00


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                      ....+                  ...+...+..+.+|+.+||..+|.+||++++++..|+.+.
T Consensus       356 ~~~~~------------------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         356 KRGYR------------------MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             HcCCC------------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            00000                  0001123456889999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.78  E-value=7.5e-19  Score=119.05  Aligned_cols=123  Identities=17%  Similarity=0.229  Sum_probs=86.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .++|+|||+++.+.....  ......++..|++||.+.+..++.++|+||+|++++++++|..||.....+.........
T Consensus       144 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  221 (267)
T cd08229         144 VVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE  221 (267)
T ss_pred             CEEECcchhhhccccCCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhh
Confidence            478999999876532211  123356888999999998888899999999999999999999998653322111111100


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                      ...                 .........+..+.+++.+||..+|.+|||+.+|++.+.++.
T Consensus       222 ~~~-----------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         222 QCD-----------------YPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             cCC-----------------CCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence            000                 000001234556899999999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.78  E-value=3.3e-19  Score=121.08  Aligned_cols=123  Identities=23%  Similarity=0.383  Sum_probs=85.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++........ ......++..|++||++....++.++|+||+|++++++++ |..||..........  ..
T Consensus       145 ~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~--~~  221 (270)
T cd05056         145 CVKLGDFGLSRYLEDESYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIG--RI  221 (270)
T ss_pred             CeEEccCceeeecccccce-ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH--HH
Confidence            4799999999876432111 1122234567999999887789999999999999999986 999986644321111  00


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      ......                  .....++..+.+++.+||..+|++|||+.+++..|.++..+
T Consensus       222 ~~~~~~------------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~  268 (270)
T cd05056         222 ENGERL------------------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE  268 (270)
T ss_pred             HcCCcC------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            000000                  00123345688999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.78  E-value=2.9e-19  Score=122.78  Aligned_cols=126  Identities=21%  Similarity=0.347  Sum_probs=81.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh--cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT--GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~--g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++...............++..|++||+..+..++.++||||||++++++++  +..||.......  ....
T Consensus       168 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~--~~~~  245 (296)
T cd05051         168 TIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQ--VIEN  245 (296)
T ss_pred             ceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHH--HHHH
Confidence            478999999987543222222233456778999999887789999999999999999998  566764432211  1111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ...........     ..      .......+.++.+++.+||+.||.+|||+.+++..|+
T Consensus       246 ~~~~~~~~~~~-----~~------~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         246 AGHFFRDDGRQ-----IY------LPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             HHhcccccccc-----cc------CCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            11110000000     00      0001123356899999999999999999999998885

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.78  E-value=5.3e-19  Score=127.86  Aligned_cols=138  Identities=15%  Similarity=0.041  Sum_probs=81.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccc------cc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEE------MT   75 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~------~~   75 (161)
                      .+||+|||+++...............||..|++||++.+..++.++||||||+++||+++|..++.......      ..
T Consensus       298 ~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~  377 (461)
T PHA03211        298 DICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQ  377 (461)
T ss_pred             CEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHH
Confidence            479999999987643222212234569999999999988889999999999999999999876543322110      01


Q ss_pred             hhHHhhhhc--CCCCccccccccccc----------hhhhh---hhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           76 LKHWVNDWL--PISTMEVVDVNLLSQ----------EDIHF---VAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        76 ~~~~~~~~~--~~~~~~~~~~~~~~~----------~~~~~---~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      +........  ...............          .....   .........+.+|+.+||.+||.+|||+.|+++|-
T Consensus       378 l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp  456 (461)
T PHA03211        378 ILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLP  456 (461)
T ss_pred             HHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCc
Confidence            111111100  000000000000000          00000   00011234578999999999999999999999873

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=1.9e-19  Score=124.74  Aligned_cols=114  Identities=23%  Similarity=0.260  Sum_probs=80.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......  .......||+.|+|||++.+..++.++||||+|++++++++|..||.......  .   ..
T Consensus       131 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~--~---~~  203 (312)
T cd05585         131 HIALCDFGLCKLNMKDD--DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNE--M---YR  203 (312)
T ss_pred             cEEEEECcccccCccCC--CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHH--H---HH
Confidence            47999999997642211  12234578999999999988889999999999999999999999996532211  1   11


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCC---HHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRIN---AKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps---~~~vl~~  138 (161)
                      .......                ..+...+..+.+|+.+||..||.+||+   +.+++.|
T Consensus       204 ~~~~~~~----------------~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h  247 (312)
T cd05585         204 KILQEPL----------------RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH  247 (312)
T ss_pred             HHHcCCC----------------CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence            1100000                001223345889999999999999974   6777776

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.78  E-value=2.7e-19  Score=120.66  Aligned_cols=121  Identities=24%  Similarity=0.415  Sum_probs=83.3

Q ss_pred             ceeeecccccccccCCCCcc-ccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~-~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++......... ......++..|++||...+..++.++|+||||++++++++ |..||......  .+...
T Consensus       133 ~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~--~~~~~  210 (257)
T cd05060         133 QAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA--EVIAM  210 (257)
T ss_pred             cEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH--HHHHH
Confidence            47999999998764322211 1111223467999999988889999999999999999997 89998654321  11111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      .....+.                  ..+..++..+.+++.+||..+|++|||+.++++.|++.
T Consensus       211 ~~~~~~~------------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         211 LESGERL------------------PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             HHcCCcC------------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence            1111000                  00122334588999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.78  E-value=2.6e-19  Score=120.43  Aligned_cols=119  Identities=27%  Similarity=0.408  Sum_probs=79.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++................+..|++||.+.+..++.++|+||+|++++++++ |..||........  ....
T Consensus       132 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~--~~~~  209 (252)
T cd05084         132 VLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT--REAI  209 (252)
T ss_pred             cEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH--HHHH
Confidence            479999999876532111111111223456999999988889999999999999999997 8888754332211  0000


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ....+.                  ......+..+.+++.+||+.+|++|||+.++++.|+
T Consensus       210 ~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         210 EQGVRL------------------PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HcCCCC------------------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            000000                  001122345889999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.78  E-value=2.3e-19  Score=130.81  Aligned_cols=118  Identities=22%  Similarity=0.394  Sum_probs=87.6

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      .|||+|||+.|.+..+.+. .......-+..|+|||.+....|+.++|||.||+.+|||++ |+.|+-+..... .+.  
T Consensus       250 tVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~q-IL~--  326 (1039)
T KOG0199|consen  250 TVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQ-ILK--  326 (1039)
T ss_pred             eeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHH-HHH--
Confidence            5899999999988655442 23333445678999999999999999999999999999998 888986643311 110  


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                                 .+|      ...+.+.+..|++.+.++|..||..+|++|||+.++...+
T Consensus       327 -----------~iD------~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~  369 (1039)
T KOG0199|consen  327 -----------NID------AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL  369 (1039)
T ss_pred             -----------hcc------ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence                       011      1222233567788899999999999999999999987444

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.78  E-value=2.9e-19  Score=125.31  Aligned_cols=131  Identities=22%  Similarity=0.215  Sum_probs=81.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++....     ......|+..|+|||++.+ ..++.++||||+|++++++++|+.||........ +....
T Consensus       156 ~~kl~Dfg~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~  229 (343)
T cd07878         156 ELRILDFGLARQADD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQ-LKRIM  229 (343)
T ss_pred             CEEEcCCccceecCC-----CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH-HHHHH
Confidence            579999999986532     1233578999999999876 4588999999999999999999999865332111 11000


Q ss_pred             hhhcCCCCccccccc-----------c--ccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVN-----------L--LSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~-----------~--~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      .... ..........           .  ....... .......+.+.+|+.+||..||.+|||+.+++.|-.
T Consensus       230 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~  300 (343)
T cd07878         230 EVVG-TPSPEVLKKISSEHARKYIQSLPHMPQQDLK-KIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPY  300 (343)
T ss_pred             HHhC-CCCHHHHHhcchhhHHHHhhccccccchhHH-HhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence            0000 0000000000           0  0000000 000112345789999999999999999999998843

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.78  E-value=3.7e-19  Score=126.21  Aligned_cols=114  Identities=21%  Similarity=0.326  Sum_probs=87.3

Q ss_pred             eeeecccccccccCCCCccccccccccccccCCCCCCCCCCC-CCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-ANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~-~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      |||+|||++..+.++.+   ....+|+..|-|||++.+..|+ ++.||||+|+|+|.++.|+.||+.....+. +.    
T Consensus       158 VKLTDFGFSNkf~PG~k---L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET-LT----  229 (864)
T KOG4717|consen  158 VKLTDFGFSNKFQPGKK---LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET-LT----  229 (864)
T ss_pred             eEeeeccccccCCCcch---hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh-hh----
Confidence            79999999988754433   4668999999999999999986 557999999999999999999976433211 10    


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                                  ..+.+++-.    +...+.++++||..||+.||++|.|.+++..+-|
T Consensus       230 ------------mImDCKYtv----PshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~W  272 (864)
T KOG4717|consen  230 ------------MIMDCKYTV----PSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSW  272 (864)
T ss_pred             ------------hhhcccccC----chhhhHHHHHHHHHHHhcCchhhccHHHHhcccc
Confidence                        111122211    3456677999999999999999999999887644

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.78  E-value=1.2e-19  Score=126.83  Aligned_cols=120  Identities=18%  Similarity=0.207  Sum_probs=83.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++....     ......|++.|+|||++.+..++.++||||+|++++++++|..||......... . ...
T Consensus       139 ~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~-~-~i~  211 (333)
T cd05600         139 HIKLTDFGLSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETW-E-NLK  211 (333)
T ss_pred             CEEEEeCcCCccccc-----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHH-H-HHH
Confidence            589999999986532     223457899999999998888999999999999999999999999764332211 0 001


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      .+.. ....   +.. ..      .....+.++.+++.+||..+|.+||++++++.|-
T Consensus       212 ~~~~-~~~~---~~~-~~------~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~  258 (333)
T cd05600         212 YWKE-TLQR---PVY-DD------PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHP  258 (333)
T ss_pred             hccc-cccC---CCC-Cc------cccccCHHHHHHHHHHhhChhhhcCCHHHHHhCc
Confidence            0000 0000   000 00      0012345688999999999999999999999884

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.78  E-value=2.1e-19  Score=125.30  Aligned_cols=115  Identities=21%  Similarity=0.280  Sum_probs=81.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....  ........||+.|+|||++.+..++.++||||+|++++++++|+.||.......  ...   
T Consensus       133 ~~kL~DfG~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~--~~~---  205 (328)
T cd05593         133 HIKITDFGLCKEGITD--AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK--LFE---  205 (328)
T ss_pred             cEEEecCcCCccCCCc--ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHH--HHH---
Confidence            4799999998764321  112234578999999999988889999999999999999999999996533221  110   


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~l  139 (161)
                      .....   .   .      ..    +...+..+.+|+.+||+.||.+|+     ++.++++|-
T Consensus       206 ~~~~~---~---~------~~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~  252 (328)
T cd05593         206 LILME---D---I------KF----PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHS  252 (328)
T ss_pred             HhccC---C---c------cC----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCC
Confidence            00000   0   0      00    112234578999999999999997     899999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.78  E-value=2.1e-19  Score=122.07  Aligned_cols=116  Identities=17%  Similarity=0.221  Sum_probs=78.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-----CCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-----GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-----~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||+++......  .......|+..|++||++.+     ..++.++|+||+|++++++++|+.||..........
T Consensus       149 ~~~l~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~  226 (272)
T cd06637         149 EVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF  226 (272)
T ss_pred             CEEEccCCCceeccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHH
Confidence            47999999987653211  12234568889999998752     347889999999999999999999986432211111


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .     ........              ......+..+.+|+.+||..+|.+|||+.+++.|
T Consensus       227 ~-----~~~~~~~~--------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  269 (272)
T cd06637         227 L-----IPRNPAPR--------------LKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH  269 (272)
T ss_pred             H-----HhcCCCCC--------------CCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence            0     00000000              0011223458899999999999999999999876

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.78  E-value=2.6e-19  Score=120.69  Aligned_cols=119  Identities=30%  Similarity=0.514  Sum_probs=84.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||.++...............++..|++||......++.++|+||+|++++++++ |..||.......  +....
T Consensus       143 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~  220 (262)
T cd00192         143 VVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE--VLEYL  220 (262)
T ss_pred             cEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHH
Confidence            479999999988754332222334567889999999887789999999999999999998 588886642211  11110


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ...                  .....+...+..+.+++.+||..+|++|||+.+++.+|.
T Consensus       221 ~~~------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         221 RKG------------------YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             HcC------------------CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            000                  000011233456889999999999999999999999873

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.78  E-value=2.6e-19  Score=124.62  Aligned_cols=115  Identities=20%  Similarity=0.249  Sum_probs=81.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.......  ......|++.|+|||++.+..++.++||||+|++++++++|+.||......... ..   
T Consensus       133 ~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~-~~---  206 (323)
T cd05595         133 HIKITDFGLCKEGISDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF-EL---  206 (323)
T ss_pred             CEEecccHHhccccCCCC--ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHH-HH---
Confidence            479999999876422111  223456899999999998888999999999999999999999998654332110 00   


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~l  139 (161)
                       ......            .    .+...+..+.+++.+||+.||++|+     ++.+++.|-
T Consensus       207 -~~~~~~------------~----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~  252 (323)
T cd05595         207 -ILMEEI------------R----FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR  252 (323)
T ss_pred             -HhcCCC------------C----CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCC
Confidence             000000            0    0112344578999999999999998     899998874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.78  E-value=2.9e-19  Score=120.77  Aligned_cols=123  Identities=20%  Similarity=0.366  Sum_probs=81.9

Q ss_pred             ceeeecccccccccCCCCc--cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhc-CCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQS--MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG-KKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~--~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g-~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||+++.+......  .......++..|++||+.....++.++||||||++++++++| ..||......  ....
T Consensus       136 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~--~~~~  213 (262)
T cd05058         136 TVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF--DITV  213 (262)
T ss_pred             cEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHH
Confidence            5799999999865321111  111223456789999998888899999999999999999995 4555432211  1111


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                      ......+.                  ......+..+.+++.+||..+|++||++.+++..|+++..
T Consensus       214 ~~~~~~~~------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         214 YLLQGRRL------------------LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             HHhcCCCC------------------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence            11100000                  0011123458899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.78  E-value=1.7e-19  Score=125.39  Aligned_cols=114  Identities=19%  Similarity=0.259  Sum_probs=80.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.......  ......|++.|+|||++.+..++.++|+||+|++++++++|..||........  .....
T Consensus       134 ~~kL~DfG~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~--~~~i~  209 (320)
T cd05590         134 HCKLADFGMCKEGIFNGK--TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDL--FEAIL  209 (320)
T ss_pred             cEEEeeCCCCeecCcCCC--cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH--HHHHh
Confidence            479999999876432111  22345789999999999888899999999999999999999999975432211  11000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH------HHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA------KEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~------~~vl~~  138 (161)
                      .   ...   .             .+...+..+.+++.+||+.||++|+++      ++++.|
T Consensus       210 ~---~~~---~-------------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h  253 (320)
T cd05590         210 N---DEV---V-------------YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH  253 (320)
T ss_pred             c---CCC---C-------------CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence            0   000   0             011123457899999999999999998      667766

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.77  E-value=2.2e-19  Score=124.64  Aligned_cols=114  Identities=18%  Similarity=0.262  Sum_probs=79.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......  .......||+.|++||++.+..++.++||||+|++++++++|+.||........ +.. ..
T Consensus       134 ~~kL~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~-~~~-i~  209 (316)
T cd05592         134 HIKIADFGMCKENMNGE--GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDEL-FDS-IL  209 (316)
T ss_pred             CEEEccCcCCeECCCCC--CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHH-HHH-HH
Confidence            47999999997643221  223346789999999999888899999999999999999999999976433211 110 00


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHH-HHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK-EIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~-~vl~~  138 (161)
                      ...+               .    .+...+..+.+|+.+||+.||.+||++. +++.|
T Consensus       210 ~~~~---------------~----~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h  248 (316)
T cd05592         210 NDRP---------------H----FPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQH  248 (316)
T ss_pred             cCCC---------------C----CCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence            0000               0    0112234578899999999999999864 66554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.77  E-value=3e-19  Score=122.34  Aligned_cols=121  Identities=26%  Similarity=0.292  Sum_probs=81.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC---CCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG---RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~---~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||+++.+.....   .....|+..|++||++...   .++.++||||+|++++++++|+.||.........+..
T Consensus       146 ~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~  222 (288)
T cd06616         146 NIKLCDFGISGQLVDSIA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQ  222 (288)
T ss_pred             cEEEeecchhHHhccCCc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhh
Confidence            479999999986533211   2334678899999998765   5889999999999999999999998654311011110


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ......+ .        ...      ......+..+.+|+.+||+.+|++|||+.+++.|-.
T Consensus       223 ~~~~~~~-~--------~~~------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~  269 (288)
T cd06616         223 VVKGDPP-I--------LSN------SEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPF  269 (288)
T ss_pred             hcCCCCC-c--------CCC------cCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence            0000000 0        000      001123456889999999999999999999998743

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.77  E-value=5.2e-19  Score=121.72  Aligned_cols=119  Identities=23%  Similarity=0.296  Sum_probs=82.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.......  ......++..|++||.+.+..++.++|+||||++++++++|+.||........... ...
T Consensus       154 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~-~~~  230 (296)
T cd06654         154 SVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL-IAT  230 (296)
T ss_pred             CEEECccccchhcccccc--ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHH-Hhc
Confidence            479999999876532211  12234688899999999887889999999999999999999999965433211111 000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ...+    .             ...+...+..+.+++.+||..+|+.|||+.+++.|-.
T Consensus       231 ~~~~----~-------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~  272 (296)
T cd06654         231 NGTP----E-------------LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQF  272 (296)
T ss_pred             CCCC----C-------------CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChh
Confidence            0000    0             0001223345789999999999999999999998743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.77  E-value=4.6e-19  Score=119.79  Aligned_cols=120  Identities=25%  Similarity=0.427  Sum_probs=81.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++....... ........+..|++||+..+..++.++|+||+|++++++++ |+.||.......  .....
T Consensus       141 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~  217 (261)
T cd05068         141 ICKVADFGLARVIKEDIY-EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE--VLQQV  217 (261)
T ss_pred             CEEECCcceEEEccCCcc-cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHH
Confidence            479999999987642211 11111223457999999988889999999999999999999 888986533211  11110


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ......                  ......+..+.+++.+||..+|.+||++.++...|+.+
T Consensus       218 ~~~~~~------------------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         218 DQGYRM------------------PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF  261 (261)
T ss_pred             HcCCCC------------------CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence            000000                  00112234588999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.77  E-value=2.5e-19  Score=120.75  Aligned_cols=116  Identities=27%  Similarity=0.415  Sum_probs=80.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++......     ....++..|++||++....++.++||||+|++++++++ |+.||.......  +....
T Consensus       140 ~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~--~~~~~  212 (256)
T cd05082         140 VAKVSDFGLTKEASSTQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRV  212 (256)
T ss_pred             cEEecCCccceeccccC-----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence            47999999987653211     12334567999999988889999999999999999997 888875432111  11000


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ....+                  ......++..+.+++.+||..+|++|||+.+++++|+++
T Consensus       213 ~~~~~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         213 EKGYK------------------MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             hcCCC------------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            00000                  000123345688999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.77  E-value=3.9e-19  Score=123.80  Aligned_cols=115  Identities=17%  Similarity=0.220  Sum_probs=80.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......  .......|++.|+|||++.+..++.++|+||+|++++++++|+.||........ .... .
T Consensus       139 ~~kL~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~-~~~i-~  214 (324)
T cd05589         139 FVKIADFGLCKEGMGFG--DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEV-FDSI-V  214 (324)
T ss_pred             cEEeCcccCCccCCCCC--CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHH-HHHH-H
Confidence            47999999987543211  123346789999999999888899999999999999999999999965432211 1000 0


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~l  139 (161)
                      ....               .    .+...+..+.+++.+||+.||.+||     ++.+++.|-
T Consensus       215 ~~~~---------------~----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~  258 (324)
T cd05589         215 NDEV---------------R----YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQP  258 (324)
T ss_pred             hCCC---------------C----CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCC
Confidence            0000               0    0112234578899999999999999     577777764

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.77  E-value=3.5e-20  Score=123.74  Aligned_cols=117  Identities=26%  Similarity=0.388  Sum_probs=87.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      ++|++|||+|-.+..  .-..++..+||++|||||++..-.|+..+||||+|+.-.||..|++||.+.-+....+..   
T Consensus       167 ~AKLADFGVAGQLTD--TMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMI---  241 (502)
T KOG0574|consen  167 IAKLADFGVAGQLTD--TMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMI---  241 (502)
T ss_pred             hhhhhhccccchhhh--hHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEec---
Confidence            579999999876532  112346689999999999998888999999999999999999999999775443222210   


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                         |.            .....+..+..-+.++-+|+..||...|++|.|+-++++|
T Consensus       242 ---PT------------~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  242 ---PT------------KPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             ---cC------------CCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence               00            0011111133445678899999999999999999999887

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.77  E-value=7.2e-20  Score=140.23  Aligned_cols=118  Identities=25%  Similarity=0.326  Sum_probs=88.2

Q ss_pred             ceeeecccccccccCCCCc--cccccccccccccCCCCCCCCC---CCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQS--MTQTQTLATIGYMAPEYGREGR---VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~--~~~~~~~g~~~~~~Pe~~~~~~---~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+|++|||.|..+.++...  .......||+.|||||++.+..   ..-++||||+||+..||++|+.|+...+++-..+
T Consensus      1372 ~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIM 1451 (1509)
T KOG4645|consen 1372 LIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIM 1451 (1509)
T ss_pred             cEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHH
Confidence            4799999999988654322  1224578999999999987543   6778999999999999999999998776664444


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ........|.                   .+...+.+..+|+..||+.||+.|.++.|+++|
T Consensus      1452 y~V~~gh~Pq-------------------~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1452 YHVAAGHKPQ-------------------IPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             hHHhccCCCC-------------------CchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence            3322221111                   123356668899999999999999999888776

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.77  E-value=1.7e-19  Score=125.79  Aligned_cols=119  Identities=18%  Similarity=0.251  Sum_probs=79.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccccc---chhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM---TLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~---~~~~   78 (161)
                      .+||+|||+++......  .......||..|+|||++.+..++.++|+||+|++++++++|..||........   ....
T Consensus       134 ~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~  211 (329)
T cd05618         134 HIKLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED  211 (329)
T ss_pred             CEEEeeCCccccccCCC--CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHH
Confidence            57999999987542211  122346789999999999888899999999999999999999999854221110   0000


Q ss_pred             Hhh-hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH------HHHHHH
Q 043981           79 WVN-DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA------KEIVTK  138 (161)
Q Consensus        79 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~------~~vl~~  138 (161)
                      +.. ......              ..  .+...+..+.+++.+||+.||++|+++      .+++.|
T Consensus       212 ~~~~~i~~~~--------------~~--~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05618         212 YLFQVILEKQ--------------IR--IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH  262 (329)
T ss_pred             HHHHHHhcCC--------------CC--CCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence            000 000000              00  011233457899999999999999984      677776

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.77  E-value=4.1e-19  Score=123.62  Aligned_cols=115  Identities=21%  Similarity=0.248  Sum_probs=81.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.......  ......|++.|+|||++.+..++.++||||+|++++++++|+.||........ +.    
T Consensus       138 ~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~-~~----  210 (323)
T cd05584         138 HVKLTDFGLCKESIHEGT--VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKT-ID----  210 (323)
T ss_pred             CEEEeeCcCCeecccCCC--cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHH-HH----
Confidence            579999999875432211  22335689999999999888899999999999999999999999965332110 11    


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~l  139 (161)
                      .......            .    .+...+..+.+++.+||+.+|++||     ++.+++.|-
T Consensus       211 ~~~~~~~------------~----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~  257 (323)
T cd05584         211 KILKGKL------------N----LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHP  257 (323)
T ss_pred             HHHcCCC------------C----CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCC
Confidence            0000000            0    0112234578999999999999999     889888874

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.77  E-value=2.7e-19  Score=122.57  Aligned_cols=120  Identities=23%  Similarity=0.403  Sum_probs=81.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|++||++.+..++.++||||+|++++++++ |..||.+.....  .....
T Consensus       168 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~--~~~~~  245 (288)
T cd05050         168 VVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE--VIYYV  245 (288)
T ss_pred             ceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence            478999999886532221111222345667999999888889999999999999999997 777875433221  11100


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      .   .....               ..+...+..+.+|+.+||+.+|++|||+.|+++.|++
T Consensus       246 ~---~~~~~---------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         246 R---DGNVL---------------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             h---cCCCC---------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence            0   00000               0011233558899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.77  E-value=4.8e-19  Score=119.41  Aligned_cols=117  Identities=23%  Similarity=0.424  Sum_probs=79.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||.++..... .........++..|++||++.+..++.++|+||+|++++++++ |+.||........ +. ..
T Consensus       138 ~~kl~d~g~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~-~~-~i  214 (256)
T cd05114         138 VVKVSDFGMTRYVLDD-EYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEV-VE-MI  214 (256)
T ss_pred             eEEECCCCCccccCCC-ceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HH-HH
Confidence            5799999998865322 1111122345668999999988889999999999999999999 8889865432111 11 11


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ......     ..             +...+..+.+++.+||+.+|++|||++++++.|
T Consensus       215 ~~~~~~-----~~-------------~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         215 SRGFRL-----YR-------------PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             HCCCCC-----CC-------------CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            000000     00             011123578999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.77  E-value=5.7e-19  Score=120.46  Aligned_cols=116  Identities=24%  Similarity=0.267  Sum_probs=78.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||++.......   ......|+..|++||++.+..++.++|+||+|++++++++|..||.......... ....
T Consensus       133 ~~~l~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~-~~~~  208 (277)
T cd05607         133 NCRLSDLGLAVELKDGK---TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKE-ELKR  208 (277)
T ss_pred             CEEEeeceeeeecCCCc---eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHH-HHHH
Confidence            47999999987754221   1233568899999999988889999999999999999999999986533221110 0000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIV  136 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl  136 (161)
                      ......    ..    .       .....+.++.+|+.+||+.||++||++++++
T Consensus       209 ~~~~~~----~~----~-------~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~  248 (277)
T cd05607         209 RTLEDE----VK----F-------EHQNFTEESKDICRLFLAKKPEDRLGSREKN  248 (277)
T ss_pred             Hhhccc----cc----c-------ccccCCHHHHHHHHHHhccCHhhCCCCccch
Confidence            000000    00    0       0112344588999999999999999996554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.77  E-value=5.3e-19  Score=118.78  Aligned_cols=119  Identities=28%  Similarity=0.469  Sum_probs=80.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|++||.+.+..++.++|+||+|++++++++ |..||........  ....
T Consensus       131 ~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~--~~~~  208 (251)
T cd05041         131 VLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQT--RERI  208 (251)
T ss_pred             cEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHH--HHHH
Confidence            479999999876532111111112234567999999888889999999999999999998 7788765432111  1000


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      .....                  ...+...+..+.+++.+||..+|.+|||+.++++.|.
T Consensus       209 ~~~~~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         209 ESGYR------------------MPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             hcCCC------------------CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            00000                  0001223456899999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.77  E-value=1.7e-19  Score=125.94  Aligned_cols=120  Identities=24%  Similarity=0.247  Sum_probs=80.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+...... ......||..|+|||++.+.. ++.++||||+|++++++++|..||........ .....
T Consensus       143 ~~kl~DfG~~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~~~  220 (332)
T cd05614         143 HVVLTDFGLSKEFLSEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-QSEVS  220 (332)
T ss_pred             CEEEeeCcCCccccccCCC-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC-HHHHH
Confidence            4799999999865332221 223457999999999987654 78899999999999999999999964322111 00000


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTKL  139 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~l  139 (161)
                      ......      ..          ..+...+..+.+++.+||+.||++||     ++++++.|-
T Consensus       221 ~~~~~~------~~----------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~  268 (332)
T cd05614         221 RRILKC------DP----------PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHP  268 (332)
T ss_pred             HHHhcC------CC----------CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCC
Confidence            000000      00          00112334578999999999999999     778888874

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.77  E-value=2.7e-19  Score=124.27  Aligned_cols=114  Identities=18%  Similarity=0.214  Sum_probs=80.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.......  ......|+..|++||++.+..++.++|+||+|++++++++|..||.......  ......
T Consensus       134 ~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~--~~~~i~  209 (318)
T cd05570         134 HIKIADFGMCKEGILGGV--TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE--LFQSIL  209 (318)
T ss_pred             cEEecccCCCeecCcCCC--cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH--HHHHHH
Confidence            479999999875322111  1233568999999999988889999999999999999999999996533211  110000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH-----HHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA-----KEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~-----~~vl~~  138 (161)
                      .   ...   .             .+...+..+.+|+.+||+.||.+|||+     .+++.|
T Consensus       210 ~---~~~---~-------------~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~  252 (318)
T cd05570         210 E---DEV---R-------------YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH  252 (318)
T ss_pred             c---CCC---C-------------CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence            0   000   0             011223458899999999999999999     888876

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.77  E-value=4.7e-19  Score=119.25  Aligned_cols=117  Identities=24%  Similarity=0.327  Sum_probs=81.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||++........  ......++..|++||++.+..++.++|+||+|++++++++|+.||............   
T Consensus       137 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~---  211 (256)
T cd06612         137 QAKLADFGVSGQLTDTMA--KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMI---  211 (256)
T ss_pred             cEEEcccccchhcccCcc--ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhh---
Confidence            478999999887643211  223345788999999998888999999999999999999999998654332111110   


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                        ... ...            ........+..+.+++.+||+.+|.+|||+.+++.|
T Consensus       212 --~~~-~~~------------~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~  253 (256)
T cd06612         212 --PNK-PPP------------TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH  253 (256)
T ss_pred             --ccC-CCC------------CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence              000 000            000012334568899999999999999999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.77  E-value=2.1e-18  Score=116.82  Aligned_cols=123  Identities=17%  Similarity=0.237  Sum_probs=85.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .++|+|||+++.+.....  ......++..|++||++.+..++.++|+||+|++++++++|+.||.........+.....
T Consensus       144 ~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  221 (267)
T cd08224         144 VVKLGDLGLGRFFSSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE  221 (267)
T ss_pred             cEEEeccceeeeccCCCc--ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhh
Confidence            478999999876532211  123346888999999998888999999999999999999999998543221111111000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                      ...                 .........+..+.+++.+||..+|+.|||+.+++..|..+.
T Consensus       222 ~~~-----------------~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         222 KCD-----------------YPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             cCC-----------------CCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            000                 000001133456889999999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.77  E-value=7e-19  Score=130.16  Aligned_cols=126  Identities=15%  Similarity=0.173  Sum_probs=89.7

Q ss_pred             eeeecccccccccCCCCc-ccc------ccccccccccCCCCC---CCCCCCCCccchhhhHHHHHHHhcCCCCcccccc
Q 043981            3 AHLSDFSIAKLLTGEDQS-MTQ------TQTLATIGYMAPEYG---REGRVSANGDVYSFGIMLMETFTGKKPTDEIFNE   72 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~-~~~------~~~~g~~~~~~Pe~~---~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~   72 (161)
                      .||||||.+.--....+. ...      =....|+.|++||++   .+..++.++|||++||++|.++....||.....-
T Consensus       185 ~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l  264 (738)
T KOG1989|consen  185 YKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL  264 (738)
T ss_pred             EEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce
Confidence            599999998753222211 000      013578999999976   3556899999999999999999999999653110


Q ss_pred             ccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhhcc
Q 043981           73 EMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRNVG  151 (161)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~~~  151 (161)
                                       .+      ....+..+..+.++..+.+||..||+.||.+||++-+|+.++.++......-..
T Consensus       265 -----------------aI------lng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~~  320 (738)
T KOG1989|consen  265 -----------------AI------LNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIPD  320 (738)
T ss_pred             -----------------eE------EeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCccc
Confidence                             00      111122222356777899999999999999999999999999999875544333

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=3.1e-19  Score=122.59  Aligned_cols=114  Identities=18%  Similarity=0.162  Sum_probs=81.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....     .....|++.|+|||++.+..++.++||||+|++++++++|+.||.......  ......
T Consensus       139 ~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~--~~~~i~  211 (291)
T cd05612         139 HIKLTDFGFAKKLRDR-----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG--IYEKIL  211 (291)
T ss_pred             CEEEEecCcchhccCC-----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHH
Confidence            4799999999875321     123568999999999988889999999999999999999999986543211  111000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCC-----HHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRIN-----AKEIVTKLLK  141 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~vl~~l~~  141 (161)
                      ....               .    .+...+..+.+|+.+||+.||.+|++     +++++.|-+-
T Consensus       212 ~~~~---------------~----~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~  257 (291)
T cd05612         212 AGKL---------------E----FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWF  257 (291)
T ss_pred             hCCc---------------C----CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccc
Confidence            0000               0    01112345789999999999999995     9999988643

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.77  E-value=2.1e-19  Score=120.20  Aligned_cols=139  Identities=17%  Similarity=0.190  Sum_probs=86.1

Q ss_pred             ceeeecccccccccCCCCcc-ccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCcccccc-----cc
Q 043981            2 VAHLSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNE-----EM   74 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~-~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~-----~~   74 (161)
                      .|||+|||++|.+.+..... .....+-|++|+|||++.+.. |+.+.|||+.|||+.|+++-++.|.+....     +.
T Consensus       174 ~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pf  253 (438)
T KOG0666|consen  174 RVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPF  253 (438)
T ss_pred             eeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCc
Confidence            48999999999986544432 334577899999999998876 899999999999999999988887653221     11


Q ss_pred             chhHHhh--hhcCC-CCccccccccccch-----------h----hhhh--hhHHHHHHHHHHHHHhcccCcccCCCHHH
Q 043981           75 TLKHWVN--DWLPI-STMEVVDVNLLSQE-----------D----IHFV--AKEQCVSFVFNLAMACTVESPEQRINAKE  134 (161)
Q Consensus        75 ~~~~~~~--~~~~~-~~~~~~~~~~~~~~-----------~----~~~~--~~~~~~~~~~~l~~~cl~~dp~~Rps~~~  134 (161)
                      ...+..+  ..... ....+.+.+.....           .    ....  .....++...+|+.++|.+||.+|+|+++
T Consensus       254 q~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~q  333 (438)
T KOG0666|consen  254 QHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQ  333 (438)
T ss_pred             hHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHH
Confidence            1111100  00000 00011111100000           0    0000  00111233789999999999999999999


Q ss_pred             HHHHHH
Q 043981          135 IVTKLL  140 (161)
Q Consensus       135 vl~~l~  140 (161)
                      +++|.=
T Consensus       334 Aleh~y  339 (438)
T KOG0666|consen  334 ALEHPY  339 (438)
T ss_pred             Hhcccc
Confidence            998853

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.77  E-value=3.9e-19  Score=120.77  Aligned_cols=119  Identities=24%  Similarity=0.313  Sum_probs=80.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++....   .........+..|++||+.....++.++|+||||++++++++ |..||.......  ...  
T Consensus       150 ~~kl~dfgl~~~~~~---~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~~~--  222 (270)
T cd05047         150 VAKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--LYE--  222 (270)
T ss_pred             eEEECCCCCccccch---hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH--HHH--
Confidence            478999999864211   111111233567999999887789999999999999999997 889986532211  111  


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                       .......   .            ......+..+.+++.+||..+|.+|||+.+++..|.++.
T Consensus       223 -~~~~~~~---~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         223 -KLPQGYR---L------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             -HHhCCCC---C------------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence             0000000   0            001122345789999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.77  E-value=4.4e-19  Score=119.63  Aligned_cols=117  Identities=26%  Similarity=0.452  Sum_probs=79.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++....... .......++..|++||+..+..++.++|+||+|++++++++ |..||.......  .....
T Consensus       138 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~  214 (256)
T cd05059         138 VVKVSDFGLARYVLDDQY-TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE--VVESV  214 (256)
T ss_pred             cEEECCcccceecccccc-cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH--HHHHH
Confidence            479999999986532111 11111223457999999988889999999999999999998 788886533221  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      .....                  ...+..++..+.+++.+||..+|++|||+.++++.|
T Consensus       215 ~~~~~------------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         215 SAGYR------------------LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HcCCc------------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            00000                  000122345688999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.77  E-value=3.1e-19  Score=136.65  Aligned_cols=114  Identities=18%  Similarity=0.182  Sum_probs=79.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC--CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE--GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~--~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++.+....   ......||+.|+|||++.+  ..++.++|||||||++|++++|..||.........+.. 
T Consensus       180 iVKLsDFGlAr~l~~~s---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~-  255 (1021)
T PTZ00266        180 IAKIGDFGLSKNIGIES---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISE-  255 (1021)
T ss_pred             ceEEccCCccccccccc---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHH-
Confidence            37999999998753221   1234578999999998854  34889999999999999999999999653321111111 


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ....+.          ..         ....+..+.+||..||..+|.+||++.+++.|
T Consensus       256 lk~~p~----------lp---------i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h  295 (1021)
T PTZ00266        256 LKRGPD----------LP---------IKGKSKELNILIKNLLNLSAKERPSALQCLGY  295 (1021)
T ss_pred             HhcCCC----------CC---------cCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence            000000          00         01123458899999999999999999999965

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.77  E-value=2.9e-19  Score=124.30  Aligned_cols=115  Identities=19%  Similarity=0.249  Sum_probs=81.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.......  ......|+..|+|||++.+..++.++||||+|++++++++|+.||........ +.. ..
T Consensus       134 ~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~-~~~-i~  209 (321)
T cd05591         134 HCKLADFGMCKEGILNGV--TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDL-FES-IL  209 (321)
T ss_pred             CEEEeecccceecccCCc--cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHH-HHH-HH
Confidence            479999999876432111  22345689999999999888899999999999999999999999976433211 110 00


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-------CHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-------NAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-------s~~~vl~~l  139 (161)
                         ...   .         ..    +...+.++.+++.+||+.||++|+       ++++++.|-
T Consensus       210 ---~~~---~---------~~----p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp  255 (321)
T cd05591         210 ---HDD---V---------LY----PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHP  255 (321)
T ss_pred             ---cCC---C---------CC----CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCC
Confidence               000   0         00    011234578999999999999999       888888774

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.77  E-value=6.6e-19  Score=119.03  Aligned_cols=119  Identities=23%  Similarity=0.219  Sum_probs=81.0

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++........ .......++..|++||++.+..++.++|+||+|++++++++|+.||........... ..
T Consensus       142 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~-~~  220 (263)
T cd06625         142 NVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFK-IA  220 (263)
T ss_pred             CEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHH-Hh
Confidence            4799999998765321111 111234578899999999888899999999999999999999999865322111000 00


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      .  ... .               ...+...+..+.+++.+||..+|.+|||+.+++.|.
T Consensus       221 ~--~~~-~---------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~  261 (263)
T cd06625         221 T--QPT-N---------------PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHF  261 (263)
T ss_pred             c--cCC-C---------------CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCC
Confidence            0  000 0               000122344578999999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.76  E-value=8.8e-19  Score=120.59  Aligned_cols=119  Identities=22%  Similarity=0.274  Sum_probs=82.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||++........  ......++..|++||.+.+..++.++|+||+|++++++++|..||........... ...
T Consensus       153 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~-~~~  229 (296)
T cd06655         153 SVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IAT  229 (296)
T ss_pred             CEEEccCccchhcccccc--cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHh
Confidence            478999999876543211  12334678899999999888899999999999999999999999866433211110 000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ...+ ..                ......+..+.+++.+||..||.+|||+.+++.|=.
T Consensus       230 ~~~~-~~----------------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~  271 (296)
T cd06655         230 NGTP-EL----------------QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPF  271 (296)
T ss_pred             cCCc-cc----------------CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChH
Confidence            0000 00                001123345888999999999999999999997744

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.76  E-value=5.6e-19  Score=123.41  Aligned_cols=148  Identities=18%  Similarity=0.175  Sum_probs=94.4

Q ss_pred             CceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CC-----CCccchhhhHHHHHHHhcCCCCc-ccccc-
Q 043981            1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VS-----ANGDVYSFGIMLMETFTGKKPTD-EIFNE-   72 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~-----~~~dv~s~g~il~e~~~g~~p~~-~~~~~-   72 (161)
                      +++.|+|||+|..+............+||..|||||++.+.. +.     .+.||||+|+++||++++...++ +..++ 
T Consensus       353 lTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Y  432 (534)
T KOG3653|consen  353 LTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEY  432 (534)
T ss_pred             CcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcc
Confidence            357899999999987655544555689999999999997654 22     35899999999999999776543 21111 


Q ss_pred             ccchhHHhhhhcC-CCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhh
Q 043981           73 EMTLKHWVNDWLP-ISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR  148 (161)
Q Consensus        73 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~  148 (161)
                      ...+...+...+. ..+.+.+-.+...+.-............+.+.+..||+.||+.|.|+.-|-+.+.++......
T Consensus       433 qlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~  509 (534)
T KOG3653|consen  433 QLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED  509 (534)
T ss_pred             cCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence            1122211111111 001111111111111112222234456688999999999999999999999999998876654

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.76  E-value=4.3e-19  Score=119.88  Aligned_cols=119  Identities=27%  Similarity=0.482  Sum_probs=82.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||.+........  ......++..|++||+.....++.++|+||+|++++++++ |+.||....... .+. ..
T Consensus       142 ~~kl~d~g~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~-~~~-~~  217 (261)
T cd05148         142 VCKVADFGLARLIKEDVY--LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE-VYD-QI  217 (261)
T ss_pred             eEEEccccchhhcCCccc--cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH-HHH-HH
Confidence            479999999977532211  1123345678999999887789999999999999999998 888986533211 111 11


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      .....                  .+.+..++..+.+++.+||..+|++|||++++.+.|+.+
T Consensus       218 ~~~~~------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         218 TAGYR------------------MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             HhCCc------------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence            10000                  000123334588999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.76  E-value=5.9e-19  Score=119.66  Aligned_cols=121  Identities=27%  Similarity=0.448  Sum_probs=81.8

Q ss_pred             ceeeecccccccccCCCCcc-ccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~-~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++......... .......+..|++||++....++.++|+||+|++++++++ |..||.......  ....
T Consensus       145 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~--~~~~  222 (268)
T cd05063         145 ECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHE--VMKA  222 (268)
T ss_pred             cEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHH--HHHH
Confidence            47999999998654321111 1111223457999999988788999999999999999997 999985433211  1111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ......                  .+.....+..+.+++.+||..+|+.||++.++++.|.++
T Consensus       223 i~~~~~------------------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         223 INDGFR------------------LPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HhcCCC------------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            100000                  000112334588999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.76  E-value=1.2e-18  Score=119.83  Aligned_cols=126  Identities=24%  Similarity=0.339  Sum_probs=80.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh--cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT--GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~--g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++.+.............++..|++||+.....++.++|+||||++++++++  +..||.......  ....
T Consensus       167 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~--~~~~  244 (295)
T cd05097         167 TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ--VIEN  244 (295)
T ss_pred             cEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH--HHHH
Confidence            579999999986533222212233445778999999888889999999999999999998  556665432211  1110


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      .............     .      ..+...+..+.+|+.+||+.+|++|||+.++++.|+
T Consensus       245 ~~~~~~~~~~~~~-----~------~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         245 TGEFFRNQGRQIY-----L------SQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHhhhhcccccc-----C------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            0000000000000     0      001122346899999999999999999999998886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.76  E-value=3.6e-19  Score=123.13  Aligned_cols=137  Identities=16%  Similarity=0.126  Sum_probs=83.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++......  .......++..|++||++.+ ..++.++||||+|++++++++|+.||........ +....
T Consensus       142 ~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-~~~~~  218 (309)
T cd07872         142 ELKLADFGLARAKSVPT--KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE-LHLIF  218 (309)
T ss_pred             CEEECccccceecCCCc--cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHH
Confidence            47999999987643211  12233467889999998765 3588899999999999999999999976443211 11111


Q ss_pred             hhhc-C--CCCccc------cccccccch-hhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           81 NDWL-P--ISTMEV------VDVNLLSQE-DIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        81 ~~~~-~--~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      .... +  ......      ......... ..........+..+.+|+.+||.+||.+|||++|++.|-.-
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~  289 (309)
T cd07872         219 RLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYF  289 (309)
T ss_pred             HHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhh
Confidence            0000 0  000000      000000000 00000112345568899999999999999999999987543

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.76  E-value=8.9e-19  Score=117.92  Aligned_cols=115  Identities=21%  Similarity=0.295  Sum_probs=81.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.+.....  ......|+..|++||+..+..++.++|+||+|++++++++|+.||.......  ......
T Consensus       139 ~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~  214 (256)
T cd08529         139 NVKIGDLGVAKLLSDNTN--FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGA--LILKII  214 (256)
T ss_pred             CEEEcccccceeccCccc--hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHH
Confidence            478999999887643211  1233467889999999988889999999999999999999999986543211  110000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...   .               .......+..+.+++.+||+.+|++||++.+++++
T Consensus       215 ~~~---~---------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         215 RGV---F---------------PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             cCC---C---------------CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            000   0               00011234458899999999999999999999876

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.76  E-value=6.4e-19  Score=121.63  Aligned_cols=125  Identities=22%  Similarity=0.298  Sum_probs=84.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++....   ........++..|++||+..+..++.++||||||++++++++ |..||.......  .....
T Consensus       162 ~~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~  236 (303)
T cd05088         162 VAKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--LYEKL  236 (303)
T ss_pred             cEEeCccccCcccch---hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH--HHHHH
Confidence            579999999864211   111111234567999999887778999999999999999998 999986533221  11100


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRN  149 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~  149 (161)
                      .....  .          .      .+...+..+.+|+.+||+.+|++||++.+++.+|..+.......
T Consensus       237 ~~~~~--~----------~------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~~~  287 (303)
T cd05088         237 PQGYR--L----------E------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTY  287 (303)
T ss_pred             hcCCc--C----------C------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhhhh
Confidence            00000  0          0      00112345789999999999999999999999999887655433

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.76  E-value=3.7e-19  Score=123.87  Aligned_cols=114  Identities=18%  Similarity=0.270  Sum_probs=79.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......  .......||+.|+|||++.+..++.++|+||+|++++++++|+.||.......  +.....
T Consensus       139 ~~kL~DfG~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~--~~~~i~  214 (323)
T cd05616         139 HIKIADFGMCKENMWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE--LFQSIM  214 (323)
T ss_pred             cEEEccCCCceecCCCC--CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHH--HHHHHH
Confidence            58999999997643211  12234678999999999998889999999999999999999999997543221  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH-----HHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA-----KEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~-----~~vl~~  138 (161)
                      ...   .            .    .+...+.++.+++.+||+.||.+|+++     .+++.|
T Consensus       215 ~~~---~------------~----~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h  257 (323)
T cd05616         215 EHN---V------------A----YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  257 (323)
T ss_pred             hCC---C------------C----CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence            000   0            0    011223457899999999999999984     666655

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.76  E-value=4.3e-19  Score=127.65  Aligned_cols=113  Identities=19%  Similarity=0.115  Sum_probs=85.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      +++|+|||.++.....     ....+-|..|.|||++....|+.++|+||+|+++|+|++|..||...........    
T Consensus       454 ~lrltyFG~a~~~~~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~----  524 (612)
T KOG0603|consen  454 HLRLTYFGFWSELERS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHT----  524 (612)
T ss_pred             cEEEEEechhhhCchh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHH----
Confidence            4899999999876432     2335668899999999988899999999999999999999999976444311111    


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ......                  .....+...++|+.+||+.||.+|+++.++..|-+.
T Consensus       525 ~i~~~~------------------~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  525 RIQMPK------------------FSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             hhcCCc------------------cccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence            000000                  013445668999999999999999999999998777

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.76  E-value=4.6e-19  Score=123.06  Aligned_cols=114  Identities=24%  Similarity=0.278  Sum_probs=79.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......  .......||..|+|||++.+..++.++||||+|++++++++|+.||.......  +.....
T Consensus       134 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~--~~~~i~  209 (316)
T cd05619         134 HIKIADFGMCKENMLGD--AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE--LFQSIR  209 (316)
T ss_pred             CEEEccCCcceECCCCC--CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH--HHHHHH
Confidence            47999999987532211  12234578999999999988889999999999999999999999997543221  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHH-HHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK-EIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~-~vl~~  138 (161)
                      ...+.               .    +......+.+++.+||+.||++||++. +++.|
T Consensus       210 ~~~~~---------------~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h  248 (316)
T cd05619         210 MDNPC---------------Y----PRWLTREAKDILVKLFVREPERRLGVKGDIRQH  248 (316)
T ss_pred             hCCCC---------------C----CccCCHHHHHHHHHHhccCHhhcCCChHHHHcC
Confidence            00000               0    011234478999999999999999986 66654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.76  E-value=5.1e-19  Score=120.23  Aligned_cols=121  Identities=19%  Similarity=0.334  Sum_probs=83.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|++||.+....++.++||||+|++++++++ |+.||......  ......
T Consensus       151 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~--~~~~~~  228 (273)
T cd05074         151 TVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS--EIYNYL  228 (273)
T ss_pred             CEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH--HHHHHH
Confidence            579999999987543222111222345678999999888888999999999999999998 78887653321  111111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      .......                  .....+..+.+++.+||..+|+.|||+.+++..|+++
T Consensus       229 ~~~~~~~------------------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         229 IKGNRLK------------------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             HcCCcCC------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            1000000                  0012234588999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.76  E-value=8.6e-19  Score=119.64  Aligned_cols=121  Identities=21%  Similarity=0.315  Sum_probs=82.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccch--hHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL--KHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~--~~~   79 (161)
                      .+||+|||++..+...    ......|+..|++||++.+..++.++|+||+|++++++++|+.||..........  ...
T Consensus       133 ~~~l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~  208 (279)
T cd06619         133 QVKLCDFGVSTQLVNS----IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQL  208 (279)
T ss_pred             CEEEeeCCcceecccc----cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHH
Confidence            4799999999765321    2233578899999999988889999999999999999999999986533221110  000


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      .........     ...         .....+..+.+++.+||+.+|++||++++++.|-.
T Consensus       209 ~~~~~~~~~-----~~~---------~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~  255 (279)
T cd06619         209 LQCIVDEDP-----PVL---------PVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPF  255 (279)
T ss_pred             HHHHhccCC-----CCC---------CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcc
Confidence            000000000     000         01112345889999999999999999999998854

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.76  E-value=6.8e-19  Score=118.91  Aligned_cols=119  Identities=27%  Similarity=0.444  Sum_probs=81.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+...... ......++..|++||+..+..++.++|+||||++++++++ |..||.......  .....
T Consensus       140 ~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--~~~~~  216 (260)
T cd05070         140 VCKIADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE--VLEQV  216 (260)
T ss_pred             eEEeCCceeeeeccCcccc-cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHH
Confidence            4789999999875432211 1122335667999999887788999999999999999999 888886532211  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ....+                  .+.+...+..+.+|+.+||..+|++|||+.++...|+.
T Consensus       217 ~~~~~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         217 ERGYR------------------MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HcCCC------------------CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            00000                  00012233458899999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.76  E-value=5.6e-19  Score=119.27  Aligned_cols=121  Identities=23%  Similarity=0.398  Sum_probs=82.2

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++........ .......++..|++||.+....++.++|+||||++++++++ |..||.......  ....
T Consensus       133 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~  210 (257)
T cd05115         133 YAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE--VMSF  210 (257)
T ss_pred             cEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHH
Confidence            4799999999765322111 11111223568999999887788999999999999999996 999986543221  1111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      .....+                  ...+..++.++.+++.+||.++|++||++.++.+.|+..
T Consensus       211 ~~~~~~------------------~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         211 IEQGKR------------------LDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             HHCCCC------------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            110000                  000122345688999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=3.7e-19  Score=127.86  Aligned_cols=113  Identities=20%  Similarity=0.321  Sum_probs=82.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC---CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE---GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~---~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .||++|||.|..+.      ...+++||++||||||+..   ++|+-++||||+|+...|+..+++|+.........++.
T Consensus       164 ~VKLaDFGSAsi~~------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHI  237 (948)
T KOG0577|consen  164 LVKLADFGSASIMA------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI  237 (948)
T ss_pred             eeeeccccchhhcC------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHH
Confidence            58999999998753      3456899999999999863   46999999999999999999999996543221111111


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                       ...                  ..+......-+..+..|+..||+.-|..|||+++++.|-
T Consensus       238 -AQN------------------esPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~  279 (948)
T KOG0577|consen  238 -AQN------------------ESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHR  279 (948)
T ss_pred             -Hhc------------------CCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcc
Confidence             110                  001111233345589999999999999999999998874

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.76  E-value=1.3e-18  Score=127.34  Aligned_cols=138  Identities=14%  Similarity=0.082  Sum_probs=82.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCC-Cccccccc-cchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP-TDEIFNEE-MTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p-~~~~~~~~-~~~~~~   79 (161)
                      .+||+|||+++.+..... .......|+..|++||++.+..++.++||||+|++++|++++..+ +....... ..+...
T Consensus       305 ~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~  383 (501)
T PHA03210        305 KIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKI  383 (501)
T ss_pred             CEEEEeCCCceecCcccc-cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHH
Confidence            479999999987643222 122335799999999999888899999999999999999998754 43222111 111111


Q ss_pred             hhhh------cCCCCccccccc---cccc---hhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           80 VNDW------LPISTMEVVDVN---LLSQ---EDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        80 ~~~~------~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ....      .+.......+..   ....   ...........+..+.+++.+||.+||.+|||+.|++.|-.
T Consensus       384 ~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~  456 (501)
T PHA03210        384 IDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPL  456 (501)
T ss_pred             HHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChh
Confidence            1100      000000000000   0000   00000001112345778899999999999999999998744

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.76  E-value=7e-19  Score=120.24  Aligned_cols=135  Identities=19%  Similarity=0.130  Sum_probs=80.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.......  ......++..|++||++.+.. ++.++||||+|++++++++|..|+.........+....
T Consensus       137 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~  214 (284)
T cd07839         137 ELKLADFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF  214 (284)
T ss_pred             cEEECccchhhccCCCCC--CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHH
Confidence            479999999986532211  122345788999999876644 78899999999999999999988644322211111110


Q ss_pred             hhhcCCC------Cccccccccccchhhh---hhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLPIS------TMEVVDVNLLSQEDIH---FVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .......      .....+..........   .......+..+.+++.+||+.||.+|||+++++.|
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h  281 (284)
T cd07839         215 RLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH  281 (284)
T ss_pred             HHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence            0000000      0000000000000000   00012345668899999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.76  E-value=4.8e-19  Score=120.05  Aligned_cols=120  Identities=22%  Similarity=0.301  Sum_probs=79.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC---CCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~---~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||+++.+.....  ......++..|++||.+.   ...++.++|+||+|++++++++|+.||............
T Consensus       144 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~  221 (267)
T cd06646         144 DVKLADFGVAAKITATIA--KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM  221 (267)
T ss_pred             CEEECcCccceeeccccc--ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheee
Confidence            479999999987532111  123356888999999874   334788899999999999999999998543322110000


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ......+        ...        ......+..+.+++.+||..+|++|||++++++||
T Consensus       222 ~~~~~~~--------~~~--------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         222 SKSNFQP--------PKL--------KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             ecCCCCC--------CCC--------ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            0000000        000        00112234588999999999999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.76  E-value=9.4e-19  Score=119.94  Aligned_cols=122  Identities=25%  Similarity=0.394  Sum_probs=82.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|++||.+.+..++.++|+||+|++++++++ +..||.....+.  .....
T Consensus       157 ~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~--~~~~~  234 (288)
T cd05061         157 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ--VLKFV  234 (288)
T ss_pred             cEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence            479999999986543222111122345678999999988889999999999999999998 778876533221  11110


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                      ...   ..   ..            .....+..+.+++.+||+.+|++|||+.++++.|++..
T Consensus       235 ~~~---~~---~~------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         235 MDG---GY---LD------------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             HcC---CC---CC------------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence            000   00   00            01122345899999999999999999999998888753

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.76  E-value=4.9e-19  Score=122.93  Aligned_cols=114  Identities=19%  Similarity=0.188  Sum_probs=79.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....  ........|+..|+|||++.+..++.++||||+|++++++++|..||.......  +.....
T Consensus       134 ~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~--~~~~~~  209 (316)
T cd05620         134 HIKIADFGMCKENVFG--DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDE--LFESIR  209 (316)
T ss_pred             CEEeCccCCCeecccC--CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH--HHHHHH
Confidence            4799999998753211  112344678999999999988889999999999999999999999996543221  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHH-HHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK-EIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~-~vl~~  138 (161)
                      ...+. .                  +...+..+.+++.+||+.||.+|+++. +++.|
T Consensus       210 ~~~~~-~------------------~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h  248 (316)
T cd05620         210 VDTPH-Y------------------PRWITKESKDILEKLFERDPTRRLGVVGNIRGH  248 (316)
T ss_pred             hCCCC-C------------------CCCCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence            00000 0                  011234578899999999999999974 66644

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.76  E-value=1.2e-18  Score=117.97  Aligned_cols=120  Identities=27%  Similarity=0.432  Sum_probs=82.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||.++.+...... ......++..|++||+..+..++.++|+||+|++++++++ |..||........  ....
T Consensus       140 ~~~L~dfg~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~--~~~~  216 (262)
T cd05071         140 VCKVADFGLARLIEDNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--LDQV  216 (262)
T ss_pred             cEEeccCCceeeccccccc-cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH--HHHH
Confidence            4789999999865322211 1122345678999999888889999999999999999999 7788865332211  1000


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ....                  ........+..+.+++.+||+.+|++|||+++++..|+..
T Consensus       217 ~~~~------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         217 ERGY------------------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             hcCC------------------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence            0000                  0000123345588999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.76  E-value=3e-19  Score=126.49  Aligned_cols=136  Identities=20%  Similarity=0.263  Sum_probs=83.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++....... .......++..|++||++.+.. ++.++||||+|++++++++|+.||........ +.. .
T Consensus       141 ~~kL~Dfg~a~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~-i  217 (372)
T cd07853         141 VLKICDFGLARVEEPDES-KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQ-LDL-I  217 (372)
T ss_pred             CEEeccccceeecccCcc-ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHH-HHH-H
Confidence            589999999986532211 1223346788999999987644 78899999999999999999999976443211 000 0


Q ss_pred             hhhcCCCCccccc-----------cccccchh--hhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVD-----------VNLLSQED--IHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~-----------~~~~~~~~--~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      .............           ........  .........+.++.+|+.+||+.||.+|||+.+++.|-.
T Consensus       218 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~  290 (372)
T cd07853         218 TDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY  290 (372)
T ss_pred             HHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHh
Confidence            0000000000000           00000000  000001122456889999999999999999999998854

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.76  E-value=3.5e-19  Score=124.30  Aligned_cols=112  Identities=16%  Similarity=0.162  Sum_probs=79.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....     .....|++.|+|||++.+..++.++||||+|++++++++|..||.......  ...   
T Consensus       156 ~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--~~~---  225 (329)
T PTZ00263        156 HVKVTDFGFAKKVPDR-----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR--IYE---  225 (329)
T ss_pred             CEEEeeccCceEcCCC-----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH--HHH---
Confidence            5799999999875321     123568999999999988889999999999999999999999986532211  110   


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCC-----HHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRIN-----AKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~vl~~l  139 (161)
                      .......    .        .    +...+..+.+|+.+||+.||.+|++     +++++.|-
T Consensus       226 ~i~~~~~----~--------~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp  272 (329)
T PTZ00263        226 KILAGRL----K--------F----PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHP  272 (329)
T ss_pred             HHhcCCc----C--------C----CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCC
Confidence            0000000    0        0    0112334789999999999999997     68888874

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.76  E-value=5.3e-19  Score=123.10  Aligned_cols=114  Identities=18%  Similarity=0.285  Sum_probs=79.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.......  ......||..|+|||++.+..++.++|+||+|++++++++|+.||........ +.. ..
T Consensus       139 ~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~-~~~-i~  214 (324)
T cd05587         139 HIKIADFGMCKENIFGGK--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL-FQS-IM  214 (324)
T ss_pred             CEEEeecCcceecCCCCC--ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH-HHH-HH
Confidence            479999999875322111  22345789999999999988899999999999999999999999975433211 110 00


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH-----HHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA-----KEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~-----~~vl~~  138 (161)
                      ....               ..    +...+..+.+++.+||..||.+|+++     ++++.|
T Consensus       215 ~~~~---------------~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h  257 (324)
T cd05587         215 EHNV---------------SY----PKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH  257 (324)
T ss_pred             cCCC---------------CC----CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence            0000               00    11223457899999999999999976     677665

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.76  E-value=2.2e-18  Score=117.53  Aligned_cols=118  Identities=21%  Similarity=0.297  Sum_probs=83.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .++|+|||++........  ......++..|++||++.+..++.++|+||+|++++++++|..||...........  ..
T Consensus       139 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~--~~  214 (277)
T cd06640         139 DVKLADFGVAGQLTDTQI--KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFL--IP  214 (277)
T ss_pred             CEEEcccccceeccCCcc--ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhh--hh
Confidence            478999999977643221  22334678889999999887889999999999999999999999865332111000  00


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                         ...               ........+..+.+++.+||+.+|++||++.+++.|-.-
T Consensus       215 ---~~~---------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  256 (277)
T cd06640         215 ---KNN---------------PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFI  256 (277)
T ss_pred             ---cCC---------------CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHh
Confidence               000               000123345668899999999999999999999998543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=1.8e-18  Score=116.80  Aligned_cols=119  Identities=18%  Similarity=0.296  Sum_probs=81.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC---CCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG---RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~---~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||++.......  .......++..|++||.....   .++.++|+||+|++++++++|+.||............
T Consensus       139 ~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~  216 (262)
T cd06613         139 DVKLADFGVSAQLTATI--AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLI  216 (262)
T ss_pred             CEEECccccchhhhhhh--hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            47899999987653221  122335678899999998766   6888999999999999999999998654332211110


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ......+.                ........+..+.+++.+||..+|..|||+.+++.|
T Consensus       217 ~~~~~~~~----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  260 (262)
T cd06613         217 SKSNFPPP----------------KLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH  260 (262)
T ss_pred             HhccCCCc----------------cccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            00000000                000122334568899999999999999999999865

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.76  E-value=9.7e-19  Score=119.50  Aligned_cols=119  Identities=20%  Similarity=0.258  Sum_probs=80.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC-----CCCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR-----EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~-----~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||+++.....  ........++..|++||++.     ...++.++|+||+|++++++++|+.||..........
T Consensus       141 ~~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~  218 (282)
T cd06643         141 DIKLADFGVSAKNTRT--IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLL  218 (282)
T ss_pred             CEEEcccccccccccc--ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHH
Confidence            4799999998765321  11223456888999999874     3347789999999999999999999986543221111


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      . .... .+.   ..             ..+...+..+.+++.+||+.+|.+|||+.+++.|-.
T Consensus       219 ~-~~~~-~~~---~~-------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~  264 (282)
T cd06643         219 K-IAKS-EPP---TL-------------AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPF  264 (282)
T ss_pred             H-Hhhc-CCC---CC-------------CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCC
Confidence            1 0000 000   00             001122345889999999999999999999988754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.76  E-value=6.6e-19  Score=118.70  Aligned_cols=120  Identities=23%  Similarity=0.405  Sum_probs=83.0

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++.+...... .......++..|++||.+.+..++.++|+||+|++++++++ |..||........ ... 
T Consensus       135 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-~~~-  212 (257)
T cd05040         135 KVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI-LKK-  212 (257)
T ss_pred             EEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH-HHH-
Confidence            4799999999876432221 11123456778999999988889999999999999999998 9999865433221 110 


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ... .....                ......+..+.+++.+||..+|++|||+.+++..|.
T Consensus       213 ~~~-~~~~~----------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         213 IDK-EGERL----------------ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHh-cCCcC----------------CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            000 00000                001122345889999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.76  E-value=5.5e-19  Score=124.57  Aligned_cols=134  Identities=15%  Similarity=0.105  Sum_probs=78.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCC-Ccccccccc------
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP-TDEIFNEEM------   74 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p-~~~~~~~~~------   74 (161)
                      .+||+|||+++.....   .......||..|++||++.+..++.++||||+|+++|+++++..+ |........      
T Consensus       195 ~~kl~DfG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~  271 (357)
T PHA03209        195 QVCIGDLGAAQFPVVA---PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSC  271 (357)
T ss_pred             CEEEecCccccccccC---cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHH
Confidence            4799999999753221   112335689999999999888899999999999999999985544 333211100      


Q ss_pred             --chhHHhhhh--cCCCCcc-----c----cccccccch---hhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           75 --TLKHWVNDW--LPISTME-----V----VDVNLLSQE---DIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        75 --~~~~~~~~~--~~~~~~~-----~----~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                        .+.......  .+.....     .    .........   ..........+..+.+||.+||++||.+|||+.+++.|
T Consensus       272 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h  351 (357)
T PHA03209        272 HSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY  351 (357)
T ss_pred             HHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence              111111000  0100000     0    000000000   00000111233456779999999999999999999987

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.76  E-value=1.6e-18  Score=118.33  Aligned_cols=118  Identities=25%  Similarity=0.327  Sum_probs=79.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC----CCCCCCccchhhhHHHHHHHhcCCCCccccccccchh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE----GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~----~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~   77 (161)
                      .+||+|||+++.+...   .......++..|++||++.+    ..++.++|+|++|++++++++|+.||.........+.
T Consensus       142 ~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~  218 (283)
T cd06617         142 QVKLCDFGISGYLVDS---VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLK  218 (283)
T ss_pred             CEEEeecccccccccc---cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHH
Confidence            4799999999875321   11223467888999998764    3468899999999999999999999864322111111


Q ss_pred             HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           78 HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ..... ....        .         .....+..+.+++.+||..+|++|||+.+++.|-.
T Consensus       219 ~~~~~-~~~~--------~---------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~  263 (283)
T cd06617         219 QVVEE-PSPQ--------L---------PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPF  263 (283)
T ss_pred             HHHhc-CCCC--------C---------CccccCHHHHHHHHHHccCChhhCcCHHHHhcCch
Confidence            11000 0000        0         01123455889999999999999999999998644

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.76  E-value=6.6e-19  Score=120.27  Aligned_cols=116  Identities=17%  Similarity=0.239  Sum_probs=78.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC-----CCCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR-----EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~-----~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||+++......  .......|+..|++||++.     ...++.++|+||+|++++++++|..||..........
T Consensus       159 ~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~  236 (282)
T cd06636         159 EVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF  236 (282)
T ss_pred             CEEEeeCcchhhhhccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh
Confidence            47899999987653211  1223356888999999875     2347889999999999999999999986532211110


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      . . ....+        .         .......+..+.+|+.+||..||.+|||+.+++.|
T Consensus       237 ~-~-~~~~~--------~---------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~  279 (282)
T cd06636         237 L-I-PRNPP--------P---------KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH  279 (282)
T ss_pred             h-H-hhCCC--------C---------CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence            0 0 00000        0         00012234568999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.76  E-value=3.3e-19  Score=124.38  Aligned_cols=119  Identities=18%  Similarity=0.254  Sum_probs=79.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccc---cchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEE---MTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~---~~~~~   78 (161)
                      .+||+|||+++......  .......||..|+|||++.+..++.++|+||+|++++++++|+.||.......   .....
T Consensus       134 ~~kL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~  211 (329)
T cd05588         134 HIKLTDYGMCKEGIRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTED  211 (329)
T ss_pred             CEEECcCccccccccCC--CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchH
Confidence            47999999987532211  12234678999999999988889999999999999999999999996432211   00000


Q ss_pred             Hhh-hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCC------HHHHHHH
Q 043981           79 WVN-DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRIN------AKEIVTK  138 (161)
Q Consensus        79 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps------~~~vl~~  138 (161)
                      +.. .....              ...  .+...+..+.+++.+||+.||.+|+|      +++++.|
T Consensus       212 ~~~~~~~~~--------------~~~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h  262 (329)
T cd05588         212 YLFQVILEK--------------QIR--IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH  262 (329)
T ss_pred             HHHHHHHcC--------------CCC--CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence            000 00000              000  01122345789999999999999997      6788776

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.76  E-value=7.7e-19  Score=118.68  Aligned_cols=119  Identities=27%  Similarity=0.436  Sum_probs=82.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++....... .......++..|++||+..+..++.++|+||+|++++++++ |..||........  ....
T Consensus       140 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~--~~~~  216 (260)
T cd05069         140 VCKIADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREV--LEQV  216 (260)
T ss_pred             eEEECCCccceEccCCcc-cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHH
Confidence            479999999976532211 11122345678999999888889999999999999999999 8889865432211  1111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ......                  ......+..+.+++.+||..+|++||+++++++.|++
T Consensus       217 ~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         217 ERGYRM------------------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HcCCCC------------------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            100000                  0012234558899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.76  E-value=1.1e-19  Score=126.64  Aligned_cols=115  Identities=21%  Similarity=0.254  Sum_probs=81.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.......  ......|+..|+|||++.+..++.++||||+|++++++++|..||.....+..  .....
T Consensus       134 ~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~--~~~i~  209 (325)
T cd05594         134 HIKITDFGLCKEGIKDGA--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL--FELIL  209 (325)
T ss_pred             CEEEecCCCCeecCCCCc--ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHH--HHHHh
Confidence            489999999875422111  22345699999999999888899999999999999999999999965432211  10000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~l  139 (161)
                      .. ..              ..    +...+..+.+|+.+||+.||++|+     ++++++.|-
T Consensus       210 ~~-~~--------------~~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~  253 (325)
T cd05594         210 ME-EI--------------RF----PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHK  253 (325)
T ss_pred             cC-CC--------------CC----CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCC
Confidence            00 00              00    112234578999999999999997     899999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.76  E-value=1.7e-19  Score=128.40  Aligned_cols=126  Identities=25%  Similarity=0.345  Sum_probs=90.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      ++||+|||+++...  ..........-+..|+|||.+....|+.++||||||+++||+.+ |..||.+......  ...+
T Consensus       300 ~vKISDFGLs~~~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v--~~kI  375 (474)
T KOG0194|consen  300 VVKISDFGLSRAGS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEV--KAKI  375 (474)
T ss_pred             eEEeCccccccCCc--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHH--HHHH
Confidence            47999999998642  11111112235678999999998899999999999999999998 7889876543311  1111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR  148 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~  148 (161)
                                       ....++...+...+..+..++.+||..+|+.||||.++.+.|+.+......
T Consensus       376 -----------------~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~  426 (474)
T KOG0194|consen  376 -----------------VKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA  426 (474)
T ss_pred             -----------------HhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence                             011112222334556688899999999999999999999999999876554

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.76  E-value=8.4e-19  Score=119.62  Aligned_cols=126  Identities=23%  Similarity=0.332  Sum_probs=85.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|++||......++.++|+||+|++++++++ |..||.....+.  +....
T Consensus       147 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~  224 (279)
T cd05057         147 HVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE--IPDLL  224 (279)
T ss_pred             eEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH--HHHHH
Confidence            479999999987643222211112224567999999887788999999999999999998 999986643321  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                      ......                  ..+..+...+.+++.+||..+|..|||+.+++..|.++.....
T Consensus       225 ~~~~~~------------------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~  273 (279)
T cd05057         225 EKGERL------------------PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDPQ  273 (279)
T ss_pred             hCCCCC------------------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCCc
Confidence            100000                  0011122347889999999999999999999999999866443

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.76  E-value=8.7e-19  Score=119.23  Aligned_cols=117  Identities=21%  Similarity=0.332  Sum_probs=81.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .++|+|||+++.+....  .......++..|++||++.+..++.++|+||+|++++++++|+.||.......  ......
T Consensus       136 ~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~  211 (274)
T cd06609         136 DVKLADFGVSGQLTSTM--SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR--VLFLIP  211 (274)
T ss_pred             CEEEcccccceeecccc--cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH--HHHHhh
Confidence            47899999998764321  12334568889999999988889999999999999999999999986533211  110000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ...+.        .. .        ....+..+.+++.+||..+|++|||+++++.|-
T Consensus       212 ~~~~~--------~~-~--------~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~  252 (274)
T cd06609         212 KNNPP--------SL-E--------GNKFSKPFKDFVSLCLNKDPKERPSAKELLKHK  252 (274)
T ss_pred             hcCCC--------CC-c--------ccccCHHHHHHHHHHhhCChhhCcCHHHHhhCh
Confidence            00000        00 0        011344588999999999999999999998864

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.76  E-value=1.8e-18  Score=118.18  Aligned_cols=119  Identities=20%  Similarity=0.236  Sum_probs=82.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.+.....  ......|+..|++||++.+..++.++|+||+|++++++++|+.||......... .....
T Consensus       135 ~~~l~dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~-~~~~~  211 (280)
T cd05608         135 NVRISDLGLAVELKDGQS--KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN-KELKQ  211 (280)
T ss_pred             CEEEeeCccceecCCCCc--cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhH-HHHHH
Confidence            478999999976543221  123356889999999999888999999999999999999999999653321110 00000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~l  139 (161)
                      ......                ...+...+..+.+++.+||+.||++||     ++++++.|-
T Consensus       212 ~~~~~~----------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~  258 (280)
T cd05608         212 RILNDS----------------VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHP  258 (280)
T ss_pred             hhcccC----------------CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcCh
Confidence            000000                000122345588999999999999999     778888873

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.76  E-value=2.7e-19  Score=126.49  Aligned_cols=94  Identities=23%  Similarity=0.314  Sum_probs=69.7

Q ss_pred             cccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccccc--chhHHhhhhcCCCCccccccccccchhh
Q 043981           25 QTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM--TLKHWVNDWLPISTMEVVDVNLLSQEDI  102 (161)
Q Consensus        25 ~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (161)
                      ..+|||-|+|||++.+..|+..+|.||+|||+||++.|.+||....+..-  .+..|...+.                  
T Consensus       347 StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~------------------  408 (550)
T KOG0605|consen  347 STVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLK------------------  408 (550)
T ss_pred             cccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhcc------------------
Confidence            35799999999999999999999999999999999999999987655322  2222221111                  


Q ss_pred             hhhhhHHHHHHHHHHHHHhcccCcccCCC---HHHHHHH
Q 043981          103 HFVAKEQCVSFVFNLAMACTVESPEQRIN---AKEIVTK  138 (161)
Q Consensus       103 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rps---~~~vl~~  138 (161)
                       .+.......+.++||.+||. ||++|.-   ++||.+|
T Consensus       409 -fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~H  445 (550)
T KOG0605|consen  409 -FPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKH  445 (550)
T ss_pred             -CCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcC
Confidence             11112333668999999999 9999985   6666655

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.75  E-value=1.7e-18  Score=117.11  Aligned_cols=122  Identities=20%  Similarity=0.283  Sum_probs=82.5

Q ss_pred             ceeeecccccccccCCCCcc--ccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSM--TQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~--~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||++..+.......  ......|+..|++||++... .++.++|+||+|++++++++|+.||....... .+..
T Consensus       140 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~  218 (267)
T cd06610         140 SVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-VLML  218 (267)
T ss_pred             CEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-hHHH
Confidence            47899999998765432221  22345688899999988766 68899999999999999999999986543321 1111


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .... .+.......             .....+..+.+++.+||..||++|||+.+++.|
T Consensus       219 ~~~~-~~~~~~~~~-------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~  264 (267)
T cd06610         219 TLQN-DPPSLETGA-------------DYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH  264 (267)
T ss_pred             HhcC-CCCCcCCcc-------------ccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            1110 000000000             012334568899999999999999999999876

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.75  E-value=1.5e-18  Score=116.86  Aligned_cols=115  Identities=20%  Similarity=0.249  Sum_probs=81.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .++|+|||++..+....  .......++..|++||+..+..++.++|+||+|++++++++|+.||......... .....
T Consensus       140 ~~~l~df~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~-~~~~~  216 (257)
T cd08223         140 IIKVGDLGIARVLENQC--DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLV-YRIIE  216 (257)
T ss_pred             cEEEecccceEEecccC--CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH-HHHHh
Confidence            47899999998763221  1223456888999999998888899999999999999999999998643221110 00000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...+                   ......+..+.+++.+||+.+|++|||+.+++.|
T Consensus       217 ~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  254 (257)
T cd08223         217 GKLP-------------------PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ  254 (257)
T ss_pred             cCCC-------------------CCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence            0000                   0012234458899999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.75  E-value=5.4e-19  Score=119.22  Aligned_cols=118  Identities=19%  Similarity=0.381  Sum_probs=79.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||.++..... .........++..|++||+..+..++.++|+||||++++++++ |..||.......  .....
T Consensus       138 ~~kl~d~g~~~~~~~~-~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--~~~~~  214 (256)
T cd05113         138 CVKVSDFGLSRYVLDD-EYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE--TVEKV  214 (256)
T ss_pred             CEEECCCccceecCCC-ceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHH
Confidence            4799999998765322 1111112335677999999987789999999999999999998 888886433211  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      .......          .        ....+..+.+++.+||+.+|.+|||+.+++..|+
T Consensus       215 ~~~~~~~----------~--------~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         215 SQGLRLY----------R--------PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             hcCCCCC----------C--------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            1000000          0        0112345889999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.75  E-value=1.8e-18  Score=118.94  Aligned_cols=126  Identities=21%  Similarity=0.374  Sum_probs=80.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh--cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT--GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~--g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++.+.............++..|++||+..+..++.++|+||+|++++|+++  +..||.......  ....
T Consensus       168 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~--~~~~  245 (296)
T cd05095         168 TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ--VIEN  245 (296)
T ss_pred             CEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH--HHHH
Confidence            479999999986533221111222345678999998877789999999999999999998  667775432211  1110


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      .............           .+.+..++..+.+|+.+||+.||.+|||+.++.+.|+
T Consensus       246 ~~~~~~~~~~~~~-----------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         246 TGEFFRDQGRQVY-----------LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             HHHHHhhcccccc-----------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            0000000000000           0001223355889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.75  E-value=2.4e-18  Score=116.80  Aligned_cols=123  Identities=23%  Similarity=0.330  Sum_probs=77.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-------CCCCCccchhhhHHHHHHHh-cCCCCccccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-------RVSANGDVYSFGIMLMETFT-GKKPTDEIFNEE   73 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-------~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~   73 (161)
                      ++||+|||+++...............++..|++||++...       .++.++|+||+|++++++++ |..||.......
T Consensus       138 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~  217 (269)
T cd05087         138 TVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ  217 (269)
T ss_pred             cEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH
Confidence            5799999998754322222222334577889999987532       35788999999999999996 999986543322


Q ss_pred             cchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           74 MTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ..... .. ...   .....+..          .......+.+++.+|| .+|++|||+++++..|.
T Consensus       218 ~~~~~-~~-~~~---~~~~~~~~----------~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         218 VLTYT-VR-EQQ---LKLPKPRL----------KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             HHHHH-hh-ccc---CCCCCCcc----------CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            11110 00 000   00000000          0112234778999998 68999999999998763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.75  E-value=1.2e-18  Score=118.77  Aligned_cols=117  Identities=23%  Similarity=0.352  Sum_probs=82.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||++..+....  .......++..|++||++.+..++.++|+||+|++++++++|..|+..........  ...
T Consensus       139 ~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~--~~~  214 (277)
T cd06642         139 DVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF--LIP  214 (277)
T ss_pred             CEEEccccccccccCcc--hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh--hhh
Confidence            47899999987654321  11223457889999999988888999999999999999999999986433221110  000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ...+        .          ......+..+.+++.+||..+|++|||+.+++.|-.
T Consensus       215 ~~~~--------~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~  255 (277)
T cd06642         215 KNSP--------P----------TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKF  255 (277)
T ss_pred             cCCC--------C----------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHH
Confidence            0000        0          001123445889999999999999999999999754

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.75  E-value=1.9e-18  Score=116.91  Aligned_cols=119  Identities=20%  Similarity=0.288  Sum_probs=81.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||.+.......    .....++..|++||.+.+..++.++|+||+|++++++++|..||...............
T Consensus       139 ~~~l~d~g~~~~~~~~~----~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  214 (265)
T cd06605         139 QIKLCDFGVSGQLVNSL----AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQ  214 (265)
T ss_pred             CEEEeecccchhhHHHH----hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHH
Confidence            47999999987653211    11256888999999998888999999999999999999999998654321111111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .......     +.         ......+..+.+++.+||..+|++|||+.+++.|
T Consensus       215 ~~~~~~~-----~~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         215 YIVNEPP-----PR---------LPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             HHhcCCC-----CC---------CChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence            1100000     00         0011144568899999999999999999999876

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=1e-18  Score=119.69  Aligned_cols=117  Identities=19%  Similarity=0.242  Sum_probs=81.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .++|+|||+++.......   .....|+..|++||++.+..++.++|+||+|++++++++|..||........ ......
T Consensus       140 ~~~l~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~-~~~~~~  215 (285)
T cd05605         140 HIRISDLGLAVEIPEGET---IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVK-REEVER  215 (285)
T ss_pred             CEEEeeCCCceecCCCCc---cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhH-HHHHHH
Confidence            478999999987532211   2335789999999999888899999999999999999999999976432211 000000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~  138 (161)
                      ..... .               .......+..+.+|+.+||..||++||     ++++++.|
T Consensus       216 ~~~~~-~---------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05605         216 RVKED-Q---------------EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH  261 (285)
T ss_pred             Hhhhc-c---------------cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence            00000 0               000122345578999999999999999     88899887

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.75  E-value=1.3e-18  Score=117.88  Aligned_cols=117  Identities=20%  Similarity=0.212  Sum_probs=77.7

Q ss_pred             ceeeecccccccccCCCC-ccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQ-SMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~-~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+..... ........++..|++||.+.+..++.++|+||+|++++++++|+.||.......... .  
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~-~--  220 (266)
T cd06651         144 NVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIF-K--  220 (266)
T ss_pred             CEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHH-H--
Confidence            479999999986532111 111233457889999999988889999999999999999999999986532211111 0  


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                        ......    .+          ..+......+.+++ .||..+|++||++++++.|
T Consensus       221 --~~~~~~----~~----------~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h  261 (266)
T cd06651         221 --IATQPT----NP----------QLPSHISEHARDFL-GCIFVEARHRPSAEELLRH  261 (266)
T ss_pred             --HhcCCC----CC----------CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence              000000    00          00122234466677 6888999999999999876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.75  E-value=1.5e-18  Score=117.60  Aligned_cols=117  Identities=20%  Similarity=0.262  Sum_probs=80.7

Q ss_pred             ceeeecccccccccCCCCc----cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchh
Q 043981            2 VAHLSDFSIAKLLTGEDQS----MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~----~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~   77 (161)
                      .+||+|||+++........    .......|+..|++||.+.+..++.++|+|++|++++++++|..||........ ..
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~  222 (267)
T cd06628         144 GIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQA-IF  222 (267)
T ss_pred             CEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHH-HH
Confidence            4799999999876422111    111234578899999999888889999999999999999999999875422111 10


Q ss_pred             HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           78 HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .. .....        .          ..+...+..+.+++.+||+.||.+||++.++++|
T Consensus       223 ~~-~~~~~--------~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  264 (267)
T cd06628         223 KI-GENAS--------P----------EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH  264 (267)
T ss_pred             HH-hccCC--------C----------cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence            00 00000        0          0012234558899999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.75  E-value=1.6e-18  Score=117.12  Aligned_cols=119  Identities=24%  Similarity=0.405  Sum_probs=82.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .++|+|||+++....... .......++..|++||++.+..++.++|+||+|++++++++ |..||......  ......
T Consensus       140 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~  216 (260)
T cd05067         140 CCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--EVIQNL  216 (260)
T ss_pred             CEEEccCcceeecCCCCc-ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--HHHHHH
Confidence            478999999977542111 11122345678999999988788999999999999999998 99998653321  111111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ......                  +.....+..+.+++.+||..+|++|||++++...|+.
T Consensus       217 ~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         217 ERGYRM------------------PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HcCCCC------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            000000                  0011223458999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.75  E-value=1.2e-18  Score=118.26  Aligned_cols=120  Identities=23%  Similarity=0.354  Sum_probs=81.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      ++|++|||.+........ .......++..|+|||++.+..++.++||||+|++++++++ |..||.......  .....
T Consensus       145 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~--~~~~~  221 (266)
T cd05064         145 VCKISGFRRLQEDKSEAI-YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD--VIKAV  221 (266)
T ss_pred             cEEECCCcccccccccch-hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHH
Confidence            578999998765321111 11112345678999999988889999999999999999775 999986543221  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ....                  ..+.+..++..+.+++.+||+.+|++|||+.++.+.|.++
T Consensus       222 ~~~~------------------~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         222 EDGF------------------RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HCCC------------------CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            0000                  0001223445688999999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.75  E-value=3.3e-19  Score=125.25  Aligned_cols=120  Identities=23%  Similarity=0.332  Sum_probs=82.4

Q ss_pred             ceeeecccccccccCCC---------------------------CccccccccccccccCCCCCCCCCCCCCccchhhhH
Q 043981            2 VAHLSDFSIAKLLTGED---------------------------QSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGI   54 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~---------------------------~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~   54 (161)
                      .+||+|||+++.+....                           .........||+.|+|||++.+..++.++||||+|+
T Consensus       139 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  218 (350)
T cd05573         139 HIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGV  218 (350)
T ss_pred             CEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecch
Confidence            47999999998764322                           001223457899999999998888999999999999


Q ss_pred             HHHHHHhcCCCCccccccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCC-HH
Q 043981           55 MLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRIN-AK  133 (161)
Q Consensus        55 il~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-~~  133 (161)
                      +++++++|+.||......... .. ...+. ...              ..+.....+..+.+|+.+||. ||.+|++ ++
T Consensus       219 il~ell~g~~Pf~~~~~~~~~-~~-i~~~~-~~~--------------~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~  280 (350)
T cd05573         219 ILYEMLYGFPPFYSDTLQETY-NK-IINWK-ESL--------------RFPPDPPVSPEAIDLICRLLC-DPEDRLGSFE  280 (350)
T ss_pred             hhhhhccCCCCCCCCCHHHHH-HH-HhccC-Ccc--------------cCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHH
Confidence            999999999999764422110 00 00000 000              000011134558899999997 9999999 99


Q ss_pred             HHHHHH
Q 043981          134 EIVTKL  139 (161)
Q Consensus       134 ~vl~~l  139 (161)
                      +++.|.
T Consensus       281 ~ll~hp  286 (350)
T cd05573         281 EIKSHP  286 (350)
T ss_pred             HHhcCC
Confidence            999984

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.75  E-value=6.6e-19  Score=124.70  Aligned_cols=120  Identities=17%  Similarity=0.190  Sum_probs=81.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC----CCCCCccchhhhHHHHHHHhcCCCCccccccccchh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG----RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~----~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~   77 (161)
                      .+||+|||+++....... .......||+.|+|||++.+.    .++.++|+||+|++++++++|..||........ +.
T Consensus       180 ~~kL~DfG~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-~~  257 (370)
T cd05596         180 HLKLADFGTCMKMDANGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT-YS  257 (370)
T ss_pred             CEEEEeccceeeccCCCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHH-HH
Confidence            589999999987543211 122346799999999988643    378899999999999999999999975432111 11


Q ss_pred             HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCccc--CCCHHHHHHHH
Q 043981           78 HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQ--RINAKEIVTKL  139 (161)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~--Rps~~~vl~~l  139 (161)
                      ........                ...+.....+..+.+|+.+||..+|.+  |+|+.+++.|-
T Consensus       258 ~i~~~~~~----------------~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~  305 (370)
T cd05596         258 KIMDHKNS----------------LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHP  305 (370)
T ss_pred             HHHcCCCc----------------CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCc
Confidence            00000000                000001123456889999999999987  99999999885

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.75  E-value=2.1e-18  Score=116.90  Aligned_cols=119  Identities=17%  Similarity=0.274  Sum_probs=78.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC---CCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~---~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||++......  ........|+..|+|||++.   ...++.++|+||+|++++++++|..||............
T Consensus       144 ~~~l~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~  221 (267)
T cd06645         144 HVKLADFGVSAQITAT--IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM  221 (267)
T ss_pred             CEEECcceeeeEccCc--ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhh
Confidence            4789999998765321  11223457889999999874   345788999999999999999999998653322111100


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ......+...          ..      ....+..+.+++.+||..+|++|||++++++|
T Consensus       222 ~~~~~~~~~~----------~~------~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         222 TKSNFQPPKL----------KD------KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             hccCCCCCcc----------cc------cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence            0000000000          00      00122347889999999999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.75  E-value=3.9e-18  Score=118.01  Aligned_cols=135  Identities=19%  Similarity=0.235  Sum_probs=84.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||++......    ......|+..|++||.+.+..++.++|+||+|++++++++|+.||.......  ......
T Consensus       138 ~~~l~dfg~~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~--~~~~~~  211 (308)
T cd06615         138 EIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE--LEAMFG  211 (308)
T ss_pred             cEEEccCCCccccccc----ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh--HHHhhc
Confidence            4799999998765321    1234578899999999888788999999999999999999999986533211  111110


Q ss_pred             hhcCCCCc----cccccc-cc--c------------chhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           82 DWLPISTM----EVVDVN-LL--S------------QEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        82 ~~~~~~~~----~~~~~~-~~--~------------~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ........    ...... ..  .            ....+.......+..+.+|+.+||..+|++|||+.+++.|..-.
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~  291 (308)
T cd06615         212 RPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIK  291 (308)
T ss_pred             CccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhh
Confidence            00000000    000000 00  0            00000000012345688999999999999999999999997653

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.75  E-value=7e-19  Score=123.26  Aligned_cols=112  Identities=16%  Similarity=0.130  Sum_probs=80.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      ++||+|||+++.+...     .....||+.|+|||++.+..++.++|+||+|++++++++|..||.......  ......
T Consensus       169 ~ikL~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~--~~~~i~  241 (340)
T PTZ00426        169 FIKMTDFGFAKVVDTR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL--IYQKIL  241 (340)
T ss_pred             CEEEecCCCCeecCCC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH--HHHHHh
Confidence            5899999999865321     233578999999999988889999999999999999999999997533211  110000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~l  139 (161)
                         ...    .        ..    +...+..+.+++.+||+.||++|+     ++++++.|-
T Consensus       242 ---~~~----~--------~~----p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp  285 (340)
T PTZ00426        242 ---EGI----I--------YF----PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHP  285 (340)
T ss_pred             ---cCC----C--------CC----CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCC
Confidence               000    0        00    111234478899999999999995     899998883

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.74  E-value=1.2e-18  Score=117.29  Aligned_cols=117  Identities=26%  Similarity=0.438  Sum_probs=79.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++..... .........++..|++||+..+..++.++|+||+|++++++++ |..||.......  +....
T Consensus       138 ~~~l~d~g~~~~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~~~~  214 (256)
T cd05112         138 VVKVSDFGMTRFVLDD-QYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE--VVETI  214 (256)
T ss_pred             eEEECCCcceeecccC-cccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH--HHHHH
Confidence            4789999998765322 1111122335678999999988889999999999999999998 888886532211  11100


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ..   .  .....             +...+..+.+|+.+||+.+|++|||+.+++++|
T Consensus       215 ~~---~--~~~~~-------------~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         215 NA---G--FRLYK-------------PRLASQSVYELMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             hC---C--CCCCC-------------CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence            00   0  00000             011234588999999999999999999999887

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.74  E-value=9.5e-19  Score=121.80  Aligned_cols=114  Identities=24%  Similarity=0.230  Sum_probs=79.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......  .......|++.|++||++.+..++.++||||+|++++++++|..||........  .   .
T Consensus       134 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~---~  206 (323)
T cd05575         134 HVVLTDFGLCKEGIEHS--KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEM--Y---D  206 (323)
T ss_pred             cEEEeccCCCcccccCC--CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHH--H---H
Confidence            47999999987542211  122345789999999999888899999999999999999999999965332111  0   0


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHH----HHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK----EIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~----~vl~~  138 (161)
                      ......    .        .    .....+..+.+++.+||+.||.+||++.    +++.|
T Consensus       207 ~i~~~~----~--------~----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~  251 (323)
T cd05575         207 NILNKP----L--------R----LKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNH  251 (323)
T ss_pred             HHHcCC----C--------C----CCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcC
Confidence            000000    0        0    0112234588999999999999999974    66654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.74  E-value=1.6e-18  Score=119.30  Aligned_cols=117  Identities=21%  Similarity=0.276  Sum_probs=81.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||++........  ......++..|++||.+.+..++.++|+||+|++++++++|..||............ ..
T Consensus       153 ~~~l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~-~~  229 (297)
T cd06656         153 SVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI-AT  229 (297)
T ss_pred             CEEECcCccceEccCCcc--CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeee-cc
Confidence            479999999876533221  123346888999999998888899999999999999999999999653322111100 00


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...+.                 ...+...+..+.+++.+||..+|++||++++++.|
T Consensus       230 ~~~~~-----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (297)
T cd06656         230 NGTPE-----------------LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH  269 (297)
T ss_pred             CCCCC-----------------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            00000                 00012233457889999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.74  E-value=4e-18  Score=114.76  Aligned_cols=114  Identities=17%  Similarity=0.243  Sum_probs=80.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||++........   .....++..|++||.+.+..++.++|+||+|++++++++|..||........  .....
T Consensus       140 ~~~l~d~~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~--~~~~~  214 (256)
T cd08220         140 VVKIGDFGISKILSSKSK---AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPAL--VLKIM  214 (256)
T ss_pred             EEEEccCCCceecCCCcc---ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHH--HHHHH
Confidence            478999999987643221   2234678899999999888889999999999999999999999865322111  10000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .....                  ......+..+.+++.+||..+|++|||+.+++.|
T Consensus       215 ~~~~~------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         215 SGTFA------------------PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             hcCCC------------------CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence            00000                  0011234458899999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.74  E-value=2.3e-18  Score=116.59  Aligned_cols=119  Identities=19%  Similarity=0.215  Sum_probs=80.6

Q ss_pred             ceeeecccccccccCCC----CccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchh
Q 043981            2 VAHLSDFSIAKLLTGED----QSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~----~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~   77 (161)
                      .+||+|||+++......    .........++..|++||+..+..++.++|+||+|++++++++|..||...........
T Consensus       140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~  219 (265)
T cd06631         140 IIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFY  219 (265)
T ss_pred             eEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHH
Confidence            47899999987652111    11112235688899999999888889999999999999999999999865332211111


Q ss_pred             HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           78 HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      . .. .. ...     +.          .....+..+.+++.+||..+|++||++.+++.|
T Consensus       220 ~-~~-~~-~~~-----~~----------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  262 (265)
T cd06631         220 I-GA-HR-GLM-----PR----------LPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH  262 (265)
T ss_pred             h-hh-cc-CCC-----CC----------CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            0 00 00 000     00          011234457899999999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.74  E-value=1.7e-18  Score=120.79  Aligned_cols=120  Identities=18%  Similarity=0.259  Sum_probs=79.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccccc-chhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM-TLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~-~~~~~~   80 (161)
                      .+||+|||+++......  ......+||+.|+|||++.+..++.++|+||+|++++++++|..||........ ......
T Consensus       134 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~  211 (327)
T cd05617         134 HIKLTDYGMCKEGLGPG--DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYL  211 (327)
T ss_pred             CEEEeccccceeccCCC--CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHH
Confidence            57999999987532211  122346799999999999888899999999999999999999999965332211 110000


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH------HHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA------KEIVTK  138 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~------~~vl~~  138 (161)
                      ......             ..  ...+...+..+.+++.+||+.||++|+++      .+++.|
T Consensus       212 ~~~~~~-------------~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h  260 (327)
T cd05617         212 FQVILE-------------KP--IRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH  260 (327)
T ss_pred             HHHHHh-------------CC--CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence            000000             00  00011223457899999999999999985      577666

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.74  E-value=5.3e-18  Score=114.53  Aligned_cols=115  Identities=18%  Similarity=0.208  Sum_probs=82.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||++........  ......++..|++||++.+..++.++|+|++|++++++++|..||......  .+.....
T Consensus       148 ~~kl~d~g~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~  223 (265)
T cd08217         148 NVKLGDFGLAKILGHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL--QLASKIK  223 (265)
T ss_pred             CEEEecccccccccCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH--HHHHHHh
Confidence            579999999987643221  123356888999999998888899999999999999999999998754321  1111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...   . .              ..+...+..+.+++.+||+.+|++|||+.++++|
T Consensus       224 ~~~---~-~--------------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         224 EGK---F-R--------------RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             cCC---C-C--------------CCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            000   0 0              0012334568899999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.74  E-value=2.7e-18  Score=117.46  Aligned_cols=118  Identities=21%  Similarity=0.257  Sum_probs=79.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-----CCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-----GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-----~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||+++.+.....  ......|+..|++||++..     ..++.++|+||+|++++++++|+.||........ +
T Consensus       162 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~-~  238 (286)
T cd06638         162 GVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA-L  238 (286)
T ss_pred             CEEEccCCceeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH-H
Confidence            478999999987532211  2233568899999998753     3478899999999999999999999865332111 1


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ... ....+.   ...             .+...+..+.+++.+||+.||++|||+.++++|+
T Consensus       239 ~~~-~~~~~~---~~~-------------~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~  284 (286)
T cd06638         239 FKI-PRNPPP---TLH-------------QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV  284 (286)
T ss_pred             hhc-cccCCC---ccc-------------CCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence            000 000000   000             0111234588999999999999999999999885

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.74  E-value=3.5e-18  Score=116.87  Aligned_cols=125  Identities=19%  Similarity=0.275  Sum_probs=84.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccccc------c
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM------T   75 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~------~   75 (161)
                      .++|+|||++......    ......|+..|++||++.+..++.++|+||+|++++++++|..||........      .
T Consensus       142 ~~~l~d~gl~~~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~  217 (284)
T cd06620         142 QIKLCDFGVSGELINS----IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMG  217 (284)
T ss_pred             cEEEccCCcccchhhh----ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhH
Confidence            4789999998764221    12335688999999998877899999999999999999999999975433210      0


Q ss_pred             hhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           76 LKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                      +............              ........+..+.+|+.+||+.||+.|||+.+++++..-++.
T Consensus       218 ~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~  272 (284)
T cd06620         218 ILDLLQQIVQEPP--------------PRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA  272 (284)
T ss_pred             HHHHHHHHhhccC--------------CCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            1111111000000              000011234568899999999999999999999998655443

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.74  E-value=2e-18  Score=117.15  Aligned_cols=117  Identities=20%  Similarity=0.244  Sum_probs=82.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||++.......   ......|+..|++||...+..++.++|+||+|+++|++++|+.||.......  ......
T Consensus       152 ~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~--~~~~~~  226 (269)
T cd08528         152 KVTITDFGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS--LATKIV  226 (269)
T ss_pred             cEEEecccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH--HHHHHh
Confidence            47999999998754322   2234568889999999988779999999999999999999999985432211  110000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ...   ..    +          ......+..+.+++.+||+.||++||++.++..++.
T Consensus       227 ~~~---~~----~----------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         227 EAV---YE----P----------LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             hcc---CC----c----------CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            000   00    0          000122345889999999999999999999998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.74  E-value=1.8e-19  Score=125.70  Aligned_cols=119  Identities=19%  Similarity=0.296  Sum_probs=79.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC------CCCCCCCccchhhhHHHHHHHhcCCCCccccccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR------EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMT   75 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~------~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~   75 (161)
                      .+||+|||+++.+...... ......||+.|+|||++.      ...++.++||||+|++++++++|..||........ 
T Consensus       140 ~~kL~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~-  217 (330)
T cd05601         140 HIKLADFGSAARLTANKMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKT-  217 (330)
T ss_pred             CEEeccCCCCeECCCCCce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHH-
Confidence            5799999999876432221 223357899999999876      34578899999999999999999999965432211 


Q ss_pred             hhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           76 LKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      +... ....     ...          ..+.....+..+.+|+.+||. +|.+|||+.+++.|-
T Consensus       218 ~~~i-~~~~-----~~~----------~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~  264 (330)
T cd05601         218 YNNI-MNFQ-----RFL----------KFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHP  264 (330)
T ss_pred             HHHH-HcCC-----Ccc----------CCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCC
Confidence            1100 0000     000          000011233457889999998 999999999999873

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.74  E-value=3.2e-18  Score=115.65  Aligned_cols=119  Identities=28%  Similarity=0.445  Sum_probs=81.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||.++....... .......++..|++||++....++.++|+||+|++++++++ |..||.......  .....
T Consensus       140 ~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~  216 (260)
T cd05073         140 VCKIADFGLARVIEDNEY-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRAL  216 (260)
T ss_pred             cEEECCCcceeeccCCCc-ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH--HHHHH
Confidence            579999999976532211 11122345677999999988788999999999999999998 888986532211  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ......                  ......+..+.+++.+||+.+|++||++.+++..|..
T Consensus       217 ~~~~~~------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         217 ERGYRM------------------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             hCCCCC------------------CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            100000                  0011233458899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.74  E-value=1.9e-18  Score=118.13  Aligned_cols=134  Identities=22%  Similarity=0.156  Sum_probs=80.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||++.......  .......++..|++||++.+. .++.++|+||+|++++++++|+.||........ .....
T Consensus       139 ~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~-~~~~~  215 (285)
T cd07861         139 VIKLADFGLARAFGIPV--RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ-LFRIF  215 (285)
T ss_pred             cEEECcccceeecCCCc--ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHH
Confidence            47999999997653221  112334678899999987654 478899999999999999999999875432111 11100


Q ss_pred             hhhc-C--CCC---ccccccccc--c-chhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWL-P--IST---MEVVDVNLL--S-QEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~-~--~~~---~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .... +  ...   ....+....  . ............+.++.+++.+||+.||++|||+.+++.|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~  282 (285)
T cd07861         216 RILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH  282 (285)
T ss_pred             HHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence            0000 0  000   000000000  0 0000000011245667899999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.74  E-value=3.9e-18  Score=114.90  Aligned_cols=116  Identities=23%  Similarity=0.300  Sum_probs=81.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.......  ......++..|.+||++.+..++.++|+||+|++++++++|..||.......  ..   .
T Consensus       139 ~~kl~d~~~~~~~~~~~~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~--~~---~  211 (256)
T cd08221         139 LIKLGDFGISKILGSEYS--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN--LV---V  211 (256)
T ss_pred             CEEECcCcceEEcccccc--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH--HH---H
Confidence            479999999987643221  2234568899999999988788999999999999999999999985432211  11   0


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      .......         ..      .....+..+.+++.+||..+|.+||++.+++.++
T Consensus       212 ~~~~~~~---------~~------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         212 KIVQGNY---------TP------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             HHHcCCC---------CC------CccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence            0000000         00      0122344588999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.74  E-value=9.4e-19  Score=121.92  Aligned_cols=110  Identities=22%  Similarity=0.237  Sum_probs=77.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......  .......|++.|+|||++.+..++.++||||+|++++++++|..||........ +. ...
T Consensus       134 ~~kl~DfG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~-~i~  209 (325)
T cd05602         134 HIVLTDFGLCKENIEHN--GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM-YD-NIL  209 (325)
T ss_pred             CEEEccCCCCcccccCC--CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHH-HH-HHH
Confidence            47999999997643211  122345799999999999888899999999999999999999999975332211 11 000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKE  134 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~  134 (161)
                      .. +.              .    .....+..+.+++.+||+.||.+|+++.+
T Consensus       210 ~~-~~--------------~----~~~~~~~~~~~li~~~l~~~p~~R~~~~~  243 (325)
T cd05602         210 NK-PL--------------Q----LKPNITNSARHLLEGLLQKDRTKRLGAKD  243 (325)
T ss_pred             hC-Cc--------------C----CCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence            00 00              0    01122345789999999999999998763

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.74  E-value=1.3e-18  Score=117.17  Aligned_cols=115  Identities=23%  Similarity=0.241  Sum_probs=80.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .++|+|||.++.+.....  ......|+..|++||++.+..++.++|+||+|++++++++|..||........ ... ..
T Consensus       138 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~-~~~-~~  213 (255)
T cd08219         138 KVKLGDFGSARLLTSPGA--YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL-ILK-VC  213 (255)
T ss_pred             cEEEcccCcceeeccccc--ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH-HHH-Hh
Confidence            478999999987643211  12335688899999999888899999999999999999999999865322111 000 00


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .   ... ..              .+...+..+.+++.+||+.||++|||+.+++..
T Consensus       214 ~---~~~-~~--------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         214 Q---GSY-KP--------------LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             c---CCC-CC--------------CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            0   000 00              011233457899999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.74  E-value=1.8e-18  Score=116.10  Aligned_cols=118  Identities=28%  Similarity=0.416  Sum_probs=79.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++........ ......++..|++||+..+..++.++|+||+|++++++++ |..||.......  .....
T Consensus       131 ~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~--~~~~~  207 (250)
T cd05085         131 VLKISDFGMSRQEDDGIYS-SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ--AREQV  207 (250)
T ss_pred             eEEECCCccceeccccccc-cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH--HHHHH
Confidence            4799999998764322111 1112234567999999988888999999999999999998 888986542221  11101


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ......                  ......+..+.+++.+||..+|++|||+.++.+.|.
T Consensus       208 ~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         208 EKGYRM------------------SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HcCCCC------------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            100000                  001122345889999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.74  E-value=4.1e-18  Score=116.90  Aligned_cols=117  Identities=21%  Similarity=0.260  Sum_probs=78.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-----CCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-----RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-----~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||+++.......  ......|+..|++||++...     .++.++|+||+|++++++++|+.||........ +
T Consensus       166 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~-~  242 (291)
T cd06639         166 GVKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT-L  242 (291)
T ss_pred             CEEEeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH-H
Confidence            479999999886532211  12335688899999987543     268899999999999999999999865432111 1


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ..... ..+   .....             .......+.+++.+||+.+|++||++.+++.|
T Consensus       243 ~~~~~-~~~---~~~~~-------------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~  287 (291)
T cd06639         243 FKIPR-NPP---PTLLH-------------PEKWCRSFNHFISQCLIKDFEARPSVTHLLEH  287 (291)
T ss_pred             HHHhc-CCC---CCCCc-------------ccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            11000 000   00000             11223358899999999999999999999886

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.74  E-value=3.5e-18  Score=117.33  Aligned_cols=118  Identities=18%  Similarity=0.194  Sum_probs=78.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC-----CCCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR-----EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~-----~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||++......  ........++..|++||++.     ...++.++|+||+|+++|++++|..||........ .
T Consensus       148 ~~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-~  224 (292)
T cd06644         148 DIKLADFGVSAKNVKT--LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-L  224 (292)
T ss_pred             CEEEccCccceecccc--ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHH-H
Confidence            4799999998764321  11223456888999999874     23468889999999999999999999865332111 1


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ..    .........             ..+...+..+.+++.+||..+|++||++.++++|-
T Consensus       225 ~~----~~~~~~~~~-------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~  270 (292)
T cd06644         225 LK----IAKSEPPTL-------------SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHP  270 (292)
T ss_pred             HH----HhcCCCccC-------------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence            10    000000000             00112234578899999999999999999998863

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.74  E-value=5.7e-18  Score=114.90  Aligned_cols=117  Identities=27%  Similarity=0.409  Sum_probs=78.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC--CCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR--VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~--~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||++........  ......++..|++||++....  ++.++|+||+|++++++++|..||............ 
T Consensus       147 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~-  223 (268)
T cd06624         147 VVKISDFGTSKRLAGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFK-  223 (268)
T ss_pred             eEEEecchhheecccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhh-
Confidence            478999999876532211  122345788999999886543  788999999999999999999998643221111100 


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                       .....                .....+.....++.+++.+||+.+|.+|||+.+++.|
T Consensus       224 -~~~~~----------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  265 (268)
T cd06624         224 -VGMFK----------------IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD  265 (268)
T ss_pred             -hhhhc----------------cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence             00000                0000012334558899999999999999999999876

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.74  E-value=2.5e-18  Score=117.34  Aligned_cols=132  Identities=17%  Similarity=0.190  Sum_probs=81.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.......   .....++..|++||++.. ..++.++|+||+|++++++++|..||........ + ...
T Consensus       137 ~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~-~-~~~  211 (282)
T cd07831         137 ILKLADFGSCRGIYSKPP---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ-I-AKI  211 (282)
T ss_pred             CeEEEecccccccccCCC---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHH-H-HHH
Confidence            579999999987643222   123457889999997654 4468899999999999999999999966432111 0 000


Q ss_pred             hhhcCCCCc---------cccccccccchhh-hhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLPISTM---------EVVDVNLLSQEDI-HFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~~~~~---------~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .........         ............. ........+..+.+++.+||.++|++|||+++++.|
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  279 (282)
T cd07831         212 HDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH  279 (282)
T ss_pred             HHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence            000000000         0000000000000 000112346779999999999999999999999876

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.74  E-value=1e-17  Score=114.54  Aligned_cols=133  Identities=17%  Similarity=0.143  Sum_probs=82.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||++..+.....   .....++..|++||++.+..++.++|+||+|++++++++|..||....... .+.....
T Consensus       145 ~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~-~~~~~~~  220 (287)
T cd07838         145 QVKIADFGLARIYSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD-QLDKIFD  220 (287)
T ss_pred             CEEEeccCcceeccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH-HHHHHHH
Confidence            579999999987633211   223457888999999988889999999999999999999998887543221 1111111


Q ss_pred             hhcCCCC-----ccccccccccch--hhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPIST-----MEVVDVNLLSQE--DIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .......     ............  .............+.+++.+||+.||.+||++.+++.|
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~  284 (287)
T cd07838         221 VIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH  284 (287)
T ss_pred             HcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence            0000000     000000000000  00001112345678899999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.74  E-value=4.3e-18  Score=116.48  Aligned_cols=135  Identities=21%  Similarity=0.226  Sum_probs=83.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||++........ .......++..|++||++.+. .++.++|+||+|++++++++|..||........ +....
T Consensus       138 ~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~  215 (288)
T cd07833         138 VLKLCDFGFARALRARPA-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQ-LYLIQ  215 (288)
T ss_pred             CEEEEeeecccccCCCcc-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH
Confidence            579999999987643322 122335678899999998877 688999999999999999999999865432211 11000


Q ss_pred             hhhc--CCCCcccc------cc----ccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWL--PISTMEVV------DV----NLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~--~~~~~~~~------~~----~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ....  +.......      ..    ................+.++.+|+.+||..+|++|||+++++.|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  285 (288)
T cd07833         216 KCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH  285 (288)
T ss_pred             HHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence            0000  00000000      00    00000000000112235778999999999999999999999865

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.74  E-value=2.9e-18  Score=117.29  Aligned_cols=135  Identities=18%  Similarity=0.257  Sum_probs=82.3

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+...... .......++..|++||++.+..++.++|+||+|+++++++++..|...........    
T Consensus       147 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~----  222 (284)
T cd05079         147 QVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKM----  222 (284)
T ss_pred             CEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhh----
Confidence            4799999999876432221 11223456778999999887788999999999999999999766532211100000    


Q ss_pred             hhhcCCCCcccccc-ccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           81 NDWLPISTMEVVDV-NLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        81 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                        ..+......... ..........+.....+..+.+|+.+||+.+|++|||+++++.+|+++
T Consensus       223 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         223 --IGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             --cccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence              000000000000 000000000011123445689999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.74  E-value=4.3e-18  Score=115.61  Aligned_cols=117  Identities=22%  Similarity=0.253  Sum_probs=78.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-----CCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-----GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-----~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||++.......  .......|+..|++||++..     ..++.++||||+|++++++++|..||........ +
T Consensus       151 ~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~  227 (275)
T cd06608         151 EVKLVDFGVSAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA-L  227 (275)
T ss_pred             eEEECCCccceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH-H
Confidence            47899999987653221  12234568889999998753     2367889999999999999999999864322111 1


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .....    .....             .......+..+.+|+.+||..||.+|||+.+++.|
T Consensus       228 ~~~~~----~~~~~-------------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~  272 (275)
T cd06608         228 FKIPR----NPPPT-------------LKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH  272 (275)
T ss_pred             HHhhc----cCCCC-------------CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence            11000    00000             00012234568899999999999999999999875

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.73  E-value=3.4e-18  Score=116.04  Aligned_cols=121  Identities=24%  Similarity=0.432  Sum_probs=80.7

Q ss_pred             ceeeecccccccccCCCCcccccccc---ccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTL---ATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~---g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~   77 (161)
                      .+||+|||+++...............   .+..|++||...+..++.++||||+|++++|+++ |..||.......  ..
T Consensus       144 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~--~~  221 (269)
T cd05065         144 VCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD--VI  221 (269)
T ss_pred             cEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHH--HH
Confidence            57899999987654322111111111   2347999999988889999999999999999886 888886533221  11


Q ss_pred             HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           78 HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      .......                  ..+....++..+.+++.+||+.+|++||++.+++..|+++
T Consensus       222 ~~i~~~~------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         222 NAIEQDY------------------RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             HHHHcCC------------------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            1110000                  0000122344578999999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.73  E-value=1.2e-17  Score=114.46  Aligned_cols=127  Identities=18%  Similarity=0.178  Sum_probs=82.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||++.......    .....++..|++||.+.+..++.++|+|++|++++++++|+.||...............
T Consensus       143 ~~~l~dfg~~~~~~~~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  218 (287)
T cd06621         143 QVKLCDFGVSGELVNSL----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLS  218 (287)
T ss_pred             eEEEeeccccccccccc----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHH
Confidence            47899999987653211    12345778899999998888999999999999999999999998754321111111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ............     .    .......+..+.+++.+||..+|.+|||+.|++.|-.-
T Consensus       219 ~~~~~~~~~~~~-----~----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~  269 (287)
T cd06621         219 YIVNMPNPELKD-----E----PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWI  269 (287)
T ss_pred             HHhcCCchhhcc-----C----CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccc
Confidence            100000000000     0    00001123558899999999999999999999997653

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.73  E-value=2.6e-18  Score=117.64  Aligned_cols=117  Identities=22%  Similarity=0.326  Sum_probs=81.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccccc--chhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM--TLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~--~~~~~   79 (161)
                      .++|+|||++.......   ......|+..|+|||++.+..++.++|+||+|++++++++|..||........  .....
T Consensus       140 ~~~l~Dfg~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~  216 (285)
T cd05630         140 HIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL  216 (285)
T ss_pred             CEEEeeccceeecCCCc---cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhh
Confidence            47899999987653221   11234689999999999888899999999999999999999999975332111  00000


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCC-----HHHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRIN-----AKEIVTKLL  140 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~vl~~l~  140 (161)
                      .....                   ..........+.+|+.+||+.||++|||     +++++.|-.
T Consensus       217 ~~~~~-------------------~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~  263 (285)
T cd05630         217 VKEVQ-------------------EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPL  263 (285)
T ss_pred             hhhhh-------------------hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChh
Confidence            00000                   0001123345789999999999999999     889998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.73  E-value=2.8e-18  Score=118.21  Aligned_cols=120  Identities=20%  Similarity=0.280  Sum_probs=82.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.+.....  ......|+..|++||++.+..++.++|+||+|++++++++|+.||........ +. ...
T Consensus       155 ~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-~~-~~~  230 (297)
T cd06659         155 RVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA-MK-RLR  230 (297)
T ss_pred             cEEEeechhHhhcccccc--cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HH-HHh
Confidence            479999999876532211  22335688999999999888899999999999999999999999864322111 11 000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      .......   .     .        ....+..+.+++.+||+.+|++||++.++++|-.-
T Consensus       231 ~~~~~~~---~-----~--------~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~  274 (297)
T cd06659         231 DSPPPKL---K-----N--------AHKISPVLRDFLERMLTREPQERATAQELLDHPFL  274 (297)
T ss_pred             ccCCCCc---c-----c--------cCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhh
Confidence            0000000   0     0        01123447889999999999999999999997543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.73  E-value=2.1e-18  Score=117.75  Aligned_cols=136  Identities=22%  Similarity=0.356  Sum_probs=84.0

Q ss_pred             ceeeecccccccccCCCCcc-ccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~-~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||++.......... ......++..|++||......++.++|+||+|++++++++|..|+............. 
T Consensus       147 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~-  225 (284)
T cd05038         147 LVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGI-  225 (284)
T ss_pred             CEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccc-
Confidence            57999999998764322211 1112234567999999887788999999999999999999998875532221110000 


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                       .............   ............++..+.+++.+||..+|++|||+.+++..|.++
T Consensus       226 -~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         226 -AQGQMIVTRLLEL---LKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             -ccccccHHHHHHH---HHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence             0000000000000   000000011123345688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.73  E-value=3.2e-18  Score=117.99  Aligned_cols=135  Identities=19%  Similarity=0.148  Sum_probs=81.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.......  ......++..|++||++.+. .++.++||||+|++++++++|+.||........ +. ..
T Consensus       142 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~-~~-~~  217 (301)
T cd07873         142 ELKLADFGLARAKSIPTK--TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQ-LH-FI  217 (301)
T ss_pred             cEEECcCcchhccCCCCC--cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HH-HH
Confidence            479999999976432111  12234578899999987654 478899999999999999999999976543211 10 00


Q ss_pred             hhhcC----CCCccccccccc-----cc--hhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLP----ISTMEVVDVNLL-----SQ--EDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~----~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      .....    ............     ..  ...........+..+.+|+.+||+.||.+|||+++++.|-+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~  288 (301)
T cd07873         218 FRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPY  288 (301)
T ss_pred             HHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence            00000    000000000000     00  00000011233456889999999999999999999998643

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.73  E-value=5.6e-18  Score=119.29  Aligned_cols=134  Identities=18%  Similarity=0.123  Sum_probs=83.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......   ......++..|++||.+.+..++.++||||+|++++++++|+.||........ +.....
T Consensus       156 ~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~-~~~~~~  231 (353)
T cd07850         156 TLKILDFGLARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQ-WNKIIE  231 (353)
T ss_pred             CEEEccCccceeCCCCC---CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHH
Confidence            47999999998753221   12334678899999999888899999999999999999999999865432110 000000


Q ss_pred             hhc--CCC--------Ccccccc----------ccccchhhh---hhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWL--PIS--------TMEVVDV----------NLLSQEDIH---FVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~--~~~--------~~~~~~~----------~~~~~~~~~---~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...  +..        .......          .........   .......+..+.+|+.+||++||++|||+.+++.|
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~  311 (353)
T cd07850         232 QLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH  311 (353)
T ss_pred             hcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            000  000        0000000          000000000   00012345568899999999999999999999988


Q ss_pred             H
Q 043981          139 L  139 (161)
Q Consensus       139 l  139 (161)
                      =
T Consensus       312 ~  312 (353)
T cd07850         312 P  312 (353)
T ss_pred             h
Confidence            4

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.73  E-value=3.7e-18  Score=115.06  Aligned_cols=116  Identities=30%  Similarity=0.447  Sum_probs=80.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||.++.......     ....+..|++||.+....++.++|+||+|++++++++ |..||.......  +....
T Consensus       140 ~~~l~d~g~~~~~~~~~~-----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~  212 (256)
T cd05039         140 VAKVSDFGLAKEASQGQD-----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPHV  212 (256)
T ss_pred             CEEEcccccccccccccc-----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHH
Confidence            479999999987632111     2334567999999887788999999999999999997 888886532221  11100


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ......                  ......+..+.+++.+||..+|++|||+.+++..|..+
T Consensus       213 ~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         213 EKGYRM------------------EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             hcCCCC------------------CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence            000000                  00112245588999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.73  E-value=4.5e-18  Score=116.88  Aligned_cols=117  Identities=24%  Similarity=0.324  Sum_probs=80.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||++........  ......|+..|++||+..+..++.++|+||+|++++++++|..||........ +.. ..
T Consensus       156 ~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~~-~~  231 (292)
T cd06658         156 RIKLSDFGFCAQVSKEVP--KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA-MRR-IR  231 (292)
T ss_pred             CEEEccCcchhhcccccc--cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHH-HH
Confidence            579999999876532211  22335688899999999887889999999999999999999999865322110 110 00


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...+..        ...        ....+..+.+++.+||..||.+|||++++++|
T Consensus       232 ~~~~~~--------~~~--------~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         232 DNLPPR--------VKD--------SHKVSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             hcCCCc--------ccc--------ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            000000        000        11223457889999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.73  E-value=6.6e-18  Score=116.20  Aligned_cols=119  Identities=24%  Similarity=0.312  Sum_probs=80.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC----CCCCccchhhhHHHHHHHhcCCCCccccccccchh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR----VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~----~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~   77 (161)
                      .+||+|||++..+.....   .....++..|++||.+.+..    ++.++|+||||++++++++|+.||.........+.
T Consensus       153 ~~kL~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~  229 (296)
T cd06618         153 NVKLCDFGISGRLVDSKA---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLT  229 (296)
T ss_pred             CEEECccccchhccCCCc---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHH
Confidence            479999999876532211   12235778899999987543    78899999999999999999999865322211111


Q ss_pred             HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           78 HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      .......+ ..   .     .        ....+..+.+|+.+||..||.+||++.+++.|-.
T Consensus       230 ~~~~~~~~-~~---~-----~--------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~  275 (296)
T cd06618         230 KILQEEPP-SL---P-----P--------NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPF  275 (296)
T ss_pred             HHhcCCCC-CC---C-----C--------CCCCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence            11110000 00   0     0        0112345889999999999999999999998865

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.73  E-value=4.6e-18  Score=117.78  Aligned_cols=137  Identities=18%  Similarity=0.148  Sum_probs=82.1

Q ss_pred             ceeeecccccccccCCCC-ccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCcccccccc-----
Q 043981            2 VAHLSDFSIAKLLTGEDQ-SMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM-----   74 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~-~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~-----   74 (161)
                      .+||+|||+++.+..... ........++..|+|||++.+. .++.++|+||+|++++++++|..||........     
T Consensus       150 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~  229 (316)
T cd07842         150 VVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPF  229 (316)
T ss_pred             eEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchh
Confidence            479999999987643222 1122335678899999987654 478899999999999999999999876443320     


Q ss_pred             ---chhHHhhhhcCCC---------Cccccc------cccccchhhhhhhhH--HHHHHHHHHHHHhcccCcccCCCHHH
Q 043981           75 ---TLKHWVNDWLPIS---------TMEVVD------VNLLSQEDIHFVAKE--QCVSFVFNLAMACTVESPEQRINAKE  134 (161)
Q Consensus        75 ---~~~~~~~~~~~~~---------~~~~~~------~~~~~~~~~~~~~~~--~~~~~~~~l~~~cl~~dp~~Rps~~~  134 (161)
                         .+...........         ..+...      ...............  .....+.+++.+||++||++|||+.+
T Consensus       230 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~e  309 (316)
T cd07842         230 QRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEE  309 (316)
T ss_pred             HHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHH
Confidence               0110000000000         000000      000000000000001  33456889999999999999999999


Q ss_pred             HHHH
Q 043981          135 IVTK  138 (161)
Q Consensus       135 vl~~  138 (161)
                      ++.|
T Consensus       310 il~~  313 (316)
T cd07842         310 ALEH  313 (316)
T ss_pred             HhcC
Confidence            9876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.73  E-value=6.9e-19  Score=124.68  Aligned_cols=133  Identities=23%  Similarity=0.199  Sum_probs=89.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccc-hhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMT-LKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~-~~~~~   80 (161)
                      ++||||||.|.....+..    +-+.-+.+|+|||++.+..|+...|+||.||.+||+.+|+..|.+.++..+. +.-.+
T Consensus       575 iLKLCDfGSA~~~~enei----tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~  650 (752)
T KOG0670|consen  575 ILKLCDFGSASFASENEI----TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMEL  650 (752)
T ss_pred             eeeeccCccccccccccc----cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHh
Confidence            689999999987643222    2245577999999999999999999999999999999999999987776552 22111


Q ss_pred             hhhcCCCC-----------cccc-------c---------------c-ccccch----hhhhhhhHHHHHHHHHHHHHhc
Q 043981           81 NDWLPIST-----------MEVV-------D---------------V-NLLSQE----DIHFVAKEQCVSFVFNLAMACT  122 (161)
Q Consensus        81 ~~~~~~~~-----------~~~~-------~---------------~-~~~~~~----~~~~~~~~~~~~~~~~l~~~cl  122 (161)
                      ....|..+           ..-+       +               + +.+...    .............+.+|+.+||
T Consensus       651 KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml  730 (752)
T KOG0670|consen  651 KGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKML  730 (752)
T ss_pred             cCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHh
Confidence            11111110           0000       0               0 000000    0011112345567899999999


Q ss_pred             ccCcccCCCHHHHHHH
Q 043981          123 VESPEQRINAKEIVTK  138 (161)
Q Consensus       123 ~~dp~~Rps~~~vl~~  138 (161)
                      ..||++|.|..++|.|
T Consensus       731 ~LdP~KRit~nqAL~H  746 (752)
T KOG0670|consen  731 ILDPEKRITVNQALKH  746 (752)
T ss_pred             ccChhhcCCHHHHhcC
Confidence            9999999999999887

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.73  E-value=7.9e-18  Score=115.06  Aligned_cols=134  Identities=21%  Similarity=0.277  Sum_probs=81.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchh--H
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLK--H   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~--~   78 (161)
                      .+||+|||++........  ......++..|++||++.+ ..++.++|+||+|++++++++|+.||.+.........  .
T Consensus       138 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~  215 (286)
T cd07847         138 QIKLCDFGFARILTGPGD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRK  215 (286)
T ss_pred             cEEECccccceecCCCcc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence            479999999987643221  1223457889999998765 3478899999999999999999999976443211110  0


Q ss_pred             HhhhhcC--------CCCcc-ccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           79 WVNDWLP--------ISTME-VVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        79 ~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ......+        ..... ...+......... ......+..+.+|+.+||+.+|++|||+.+++.|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~  283 (286)
T cd07847         216 TLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLE-SKFPNISSPALSFLKGCLQMDPTERLSCEELLEH  283 (286)
T ss_pred             HhCCCChHHhhhcccccccccccCCCcccccCHH-HHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence            0000000        00000 0000000000000 0011235668899999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.73  E-value=5.2e-18  Score=115.06  Aligned_cols=121  Identities=24%  Similarity=0.425  Sum_probs=82.3

Q ss_pred             ceeeecccccccccCCCCcc-ccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~-~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++.+....... ......++..|++||++.+..++.++|+|++|++++++++ |..||........  ...
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~--~~~  221 (267)
T cd05066         144 VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDV--IKA  221 (267)
T ss_pred             eEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHH--HHH
Confidence            47899999998764322111 1111233567999999988889999999999999999886 9999865433211  110


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ......                  .+.....+..+.+++.+||+.+|.+||++.++++.|.++
T Consensus       222 ~~~~~~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         222 IEEGYR------------------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             HhCCCc------------------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            000000                  000112334578999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.73  E-value=5.8e-18  Score=115.85  Aligned_cols=118  Identities=17%  Similarity=0.278  Sum_probs=79.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC------CCCCccchhhhHHHHHHHhcCCCCccccccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR------VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMT   75 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~------~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~   75 (161)
                      .+||+|||++..+...    ......++..|++||++.+..      ++.++|+||+|++++++++|+.||........ 
T Consensus       141 ~~~l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-  215 (286)
T cd06622         141 QVKLCDFGVSGNLVAS----LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANI-  215 (286)
T ss_pred             CEEEeecCCcccccCC----ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhH-
Confidence            4799999998765321    123346788999999885433      57889999999999999999999865322110 


Q ss_pred             hhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           76 LKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ... ........               ........+..+.+|+.+||+.+|++||++++++.|-+
T Consensus       216 ~~~-~~~~~~~~---------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~  264 (286)
T cd06622         216 FAQ-LSAIVDGD---------------PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPW  264 (286)
T ss_pred             HHH-HHHHhhcC---------------CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChh
Confidence            000 00000000               00011234556889999999999999999999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.73  E-value=2.8e-18  Score=118.78  Aligned_cols=117  Identities=16%  Similarity=0.168  Sum_probs=87.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCC-CCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~-~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||++..+-   +......++|++.|.+||++.+.+| .+..|.||+|+++|.++.|..||++.+.....     
T Consensus       191 NiKIADFGLSNly~---~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lv-----  262 (668)
T KOG0611|consen  191 NIKIADFGLSNLYA---DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLV-----  262 (668)
T ss_pred             Ceeeeccchhhhhc---cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHH-----
Confidence            47999999998763   3344567999999999999999987 56699999999999999999999875543221     


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                      +.+.....   .              .+..+.....||..||-.+|++|.|+.|+..|.+-.-
T Consensus       263 rQIs~GaY---r--------------EP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNw  308 (668)
T KOG0611|consen  263 RQISRGAY---R--------------EPETPSDASGLIRWMLMVNPERRATIEDIASHWWVNW  308 (668)
T ss_pred             HHhhcccc---c--------------CCCCCchHHHHHHHHHhcCcccchhHHHHhhhheeec
Confidence            11111100   0              1112233567899999999999999999999987543

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.73  E-value=4.7e-18  Score=114.49  Aligned_cols=115  Identities=20%  Similarity=0.277  Sum_probs=80.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .++|+|||++........  ......|+..|++||+..+..++.++|+||+|++++++++|+.||........ ......
T Consensus       139 ~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~-~~~~~~  215 (256)
T cd08218         139 TIKLGDFGIARVLNSTVE--LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNL-VLKIIR  215 (256)
T ss_pred             CEEEeeccceeecCcchh--hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHH-HHHHhc
Confidence            478999999976532211  12234578889999999888889999999999999999999999864322111 000000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...+                   ..+...+..+.+++.+||+.+|.+||++.+++.|
T Consensus       216 ~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         216 GSYP-------------------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             CCCC-------------------CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            0000                   0012234458899999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.73  E-value=9.4e-18  Score=115.35  Aligned_cols=118  Identities=22%  Similarity=0.282  Sum_probs=81.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||++........  ......++..|++||.+....++.++|+||+|++++++++|..||........... ...
T Consensus       153 ~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~-~~~  229 (293)
T cd06647         153 SVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IAT  229 (293)
T ss_pred             CEEEccCcceeccccccc--ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee-hhc
Confidence            479999999876543221  22334688899999998877789999999999999999999999965332211110 000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ...+                 ........+..+.+++.+||..+|++||++.+++.|-
T Consensus       230 ~~~~-----------------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~  270 (293)
T cd06647         230 NGTP-----------------ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHP  270 (293)
T ss_pred             CCCC-----------------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence            0000                 0000122344588999999999999999999999884

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.72  E-value=8.3e-18  Score=114.28  Aligned_cols=122  Identities=20%  Similarity=0.294  Sum_probs=79.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC--CCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR--VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~--~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++...............++..|++||+.....  ++.++|+||+|++++++++|..||....... .+...
T Consensus       146 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~~~~  224 (272)
T cd06629         146 ICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA-AMFKL  224 (272)
T ss_pred             eEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH-HHHHh
Confidence            47999999987653211111123345788999999887654  7889999999999999999999985422211 11100


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .......    ....          ......+..+.+++.+||..+|+.|||+.+++.|
T Consensus       225 ~~~~~~~----~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         225 GNKRSAP----PIPP----------DVSMNLSPVALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             hccccCC----cCCc----------cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence            0000000    0000          0011234568899999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.72  E-value=1.1e-17  Score=115.65  Aligned_cols=137  Identities=20%  Similarity=0.190  Sum_probs=80.1

Q ss_pred             ceeeecccccccccCCCCc--cccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCcccccccc-chh
Q 043981            2 VAHLSDFSIAKLLTGEDQS--MTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEM-TLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~--~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~-~~~   77 (161)
                      .+||+|||++..+......  .......++..|+|||.+.+.. ++.++|+||+|++++++++|..||........ ...
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~  236 (310)
T cd07865         157 ILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLI  236 (310)
T ss_pred             cEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            4799999999876432221  1122345778899999876544 78899999999999999999999865432111 011


Q ss_pred             HHhh-hhcCCCCccc-----cccccccchhh-hh---hhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           78 HWVN-DWLPISTMEV-----VDVNLLSQEDI-HF---VAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        78 ~~~~-~~~~~~~~~~-----~~~~~~~~~~~-~~---~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .... ...+......     .+......... ..   .........+.+|+.+||..||.+|||++++++|
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h  307 (310)
T cd07865         237 SQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH  307 (310)
T ss_pred             HHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence            1000 0000000000     00000000000 00   0000123456799999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.72  E-value=1.1e-18  Score=122.09  Aligned_cols=124  Identities=21%  Similarity=0.308  Sum_probs=87.7

Q ss_pred             ceeeecccccccccCCCC---ccccccccccccccCCCCCCCCC----CCCCccchhhhHHHHHHHhcCCCCcccccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQ---SMTQTQTLATIGYMAPEYGREGR----VSANGDVYSFGIMLMETFTGKKPTDEIFNEEM   74 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~---~~~~~~~~g~~~~~~Pe~~~~~~----~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~   74 (161)
                      +|||+|||++..+.....   .......+||+.|+|||...+..    -..+.|||++|+.+|.++.|+.||.+...-  
T Consensus       248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~--  325 (576)
T KOG0585|consen  248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL--  325 (576)
T ss_pred             cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH--
Confidence            589999999987632211   11223478999999999987632    356789999999999999999999653221  


Q ss_pred             chhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           75 TLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                      .+.   ..+.              ......+..++..+.+.+|+.++|+.||++|++..+|..|.+....
T Consensus       326 ~l~---~KIv--------------n~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  326 ELF---DKIV--------------NDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             HHH---HHHh--------------cCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence            111   1110              0111111233556678999999999999999999999999987764

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.72  E-value=6.7e-18  Score=116.83  Aligned_cols=136  Identities=17%  Similarity=0.096  Sum_probs=82.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.......  ......++..|++||++.+. .++.++|+||+|++++++++|..||........ +....
T Consensus       146 ~~kL~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~-~~~~~  222 (309)
T cd07845         146 CLKIADFGLARTYGLPAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQ-LDLII  222 (309)
T ss_pred             CEEECccceeeecCCccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH
Confidence            479999999987643221  12223457789999988653 478999999999999999999999875433211 11111


Q ss_pred             hhhc--CCCC-ccc------cccccccchhhhh--hhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           81 NDWL--PIST-MEV------VDVNLLSQEDIHF--VAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        81 ~~~~--~~~~-~~~------~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ....  .... ...      ..... .......  ......++.+.+++.+||++||++|||+.+++.|-.-
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f  293 (309)
T cd07845         223 QLLGTPNESIWPGFSDLPLVGKFTL-PKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYF  293 (309)
T ss_pred             HhcCCCChhhchhhhcccccccccc-cCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence            0000  0000 000      00000 0000000  0011235567899999999999999999999987543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.72  E-value=1.7e-17  Score=115.00  Aligned_cols=138  Identities=15%  Similarity=0.256  Sum_probs=83.8

Q ss_pred             ceeeecccccccccCCCCc-----cccccccccccccCCCCCCCC--CCCCCccchhhhHHHHHHHhcCCCCcccccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQS-----MTQTQTLATIGYMAPEYGREG--RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM   74 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-----~~~~~~~g~~~~~~Pe~~~~~--~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~   74 (161)
                      .+||+|||.+.........     .......++..|++||++...  .++.++|+||+|++++++++|..||........
T Consensus       139 ~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~  218 (314)
T cd08216         139 KVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM  218 (314)
T ss_pred             ceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            4789999988765322111     111234567789999988653  488899999999999999999999976433221


Q ss_pred             chhHHhhhhcCCCCc---------cccc-----cccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           75 TLKHWVNDWLPISTM---------EVVD-----VNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        75 ~~~~~~~~~~~~~~~---------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      .... .....+....         ....     ....................+.+|+.+||.+||++|||+++++.|-.
T Consensus       219 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~  297 (314)
T cd08216         219 LLEK-VRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSF  297 (314)
T ss_pred             HHHH-HhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCch
Confidence            1111 0000000000         0000     00000011111122344567889999999999999999999999865

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.72  E-value=9.6e-18  Score=114.54  Aligned_cols=116  Identities=19%  Similarity=0.290  Sum_probs=79.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||++......    ......|+..|++||.... ..++.++|+||+|++++++++|..||..............
T Consensus       135 ~~~l~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~  210 (279)
T cd05633         135 HVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM  210 (279)
T ss_pred             CEEEccCCcceecccc----CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHH
Confidence            4789999998765321    1123468999999998763 4588999999999999999999999865432211111000


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTKL  139 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~l  139 (161)
                      .  ...                ....+...+..+.+++.+||..||++|+     |++++++|.
T Consensus       211 ~--~~~----------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~  256 (279)
T cd05633         211 T--LTV----------------NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHV  256 (279)
T ss_pred             h--hcC----------------CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCc
Confidence            0  000                0000122345688999999999999999     599999884

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.72  E-value=5.5e-18  Score=115.76  Aligned_cols=134  Identities=19%  Similarity=0.170  Sum_probs=79.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.....  ......++..|++||++.+. .++.++|+||+|++++++++|+.||........ +....
T Consensus       137 ~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~  213 (283)
T cd07835         137 ALKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ-LFRIF  213 (283)
T ss_pred             cEEEeecccccccCCCcc--ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH
Confidence            478999999976532211  12234567889999987654 478899999999999999999999865432111 11111


Q ss_pred             hhh-cCCCC-----cccccccc-cc--chhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDW-LPIST-----MEVVDVNL-LS--QEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~-~~~~~-----~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ... .+...     ....+... ..  ............+..+.+++.+||+.+|++|||+++++.|
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  280 (283)
T cd07835         214 RTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH  280 (283)
T ss_pred             HHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            100 00000     00000000 00  0000000012233568899999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.72  E-value=9.9e-18  Score=115.89  Aligned_cols=115  Identities=22%  Similarity=0.304  Sum_probs=79.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC---CCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~---~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||++......      ....++..|++||++.   ...++.++||||||+++|++++|..||........... 
T Consensus       153 ~~kL~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~-  225 (307)
T cd06607         153 TVKLADFGSASLVSPA------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH-  225 (307)
T ss_pred             CEEEeecCcceecCCC------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHH-
Confidence            4799999998764321      2346788999999874   34588899999999999999999999865322111000 


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      .... .+.                 .......+..+.+++.+||..+|++||++.+++.|..-
T Consensus       226 ~~~~-~~~-----------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  270 (307)
T cd06607         226 IAQN-DSP-----------------TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFV  270 (307)
T ss_pred             HhcC-CCC-----------------CCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence            0000 000                 00011234568999999999999999999999987543

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.72  E-value=1.3e-17  Score=113.29  Aligned_cols=114  Identities=18%  Similarity=0.250  Sum_probs=80.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .++|+|||+++.....      ....++..|++||++.+..++.++|+||+|++++++++|+.||.....+......+..
T Consensus       148 ~~~l~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~  221 (267)
T PHA03390        148 RIYLCDYGLCKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLK  221 (267)
T ss_pred             eEEEecCccceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHH
Confidence            4799999998765321      2245788999999998888999999999999999999999999754333222221111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCC-HHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRIN-AKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-~~~vl~~  138 (161)
                      ....                 ........+..+.+++.+||+.+|.+||+ ++++++|
T Consensus       222 ~~~~-----------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h  262 (267)
T PHA03390        222 RQQK-----------------KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH  262 (267)
T ss_pred             hhcc-----------------cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence            1100                 00001234456889999999999999996 5988865

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.72  E-value=4.9e-18  Score=116.12  Aligned_cols=135  Identities=21%  Similarity=0.335  Sum_probs=81.3

Q ss_pred             ceeeecccccccccCCCCcc-ccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~-~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+....... ......++..|++||+..+..++.++|+||+|++++|++++..++......   +....
T Consensus       146 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~  222 (284)
T cd05081         146 RVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---FMRMM  222 (284)
T ss_pred             eEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---hhhhc
Confidence            47999999998764322211 111123445699999998888999999999999999999977654321111   00000


Q ss_pred             hhhcC--CCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           81 NDWLP--ISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        81 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      .....  .........   .......+.....+..+.+|+.+||..+|++|||+.+++..|+++
T Consensus       223 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         223 GNDKQGQMIVYHLIEL---LKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             ccccccccchHHHHHH---HhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            00000  000000000   000000011123345689999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.72  E-value=1.1e-17  Score=114.58  Aligned_cols=117  Identities=19%  Similarity=0.259  Sum_probs=80.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......   ......|+..|++||++.+..++.++|+||+|++++++++|..||........ ......
T Consensus       140 ~~kl~Dfg~~~~~~~~~---~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~-~~~~~~  215 (285)
T cd05632         140 HIRISDLGLAVKIPEGE---SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK-REEVDR  215 (285)
T ss_pred             CEEEecCCcceecCCCC---cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH
Confidence            47999999987653211   12335689999999999888899999999999999999999999975432211 010000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCC-----HHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRIN-----AKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~vl~~  138 (161)
                      ...... ..               .....+..+.+|+..||+.||++||+     +.+++.|
T Consensus       216 ~~~~~~-~~---------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~  261 (285)
T cd05632         216 RVLETE-EV---------------YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH  261 (285)
T ss_pred             hhhccc-cc---------------cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence            000000 00               01122344788999999999999999     6777776

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.72  E-value=6.5e-18  Score=118.47  Aligned_cols=136  Identities=18%  Similarity=0.177  Sum_probs=82.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++....     ......++..|++||++.+ ..++.++|+||+|++++++++|+.||....... .+....
T Consensus       155 ~~kL~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~  228 (342)
T cd07879         155 ELKILDFGLARHADA-----EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQIL  228 (342)
T ss_pred             CEEEeeCCCCcCCCC-----CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH
Confidence            479999999876422     1223467888999998865 358889999999999999999999997643211 111100


Q ss_pred             hhhc-C-CC---------Cccccc-cccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH--HHHhHH
Q 043981           81 NDWL-P-IS---------TMEVVD-VNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK--LLKIRD  144 (161)
Q Consensus        81 ~~~~-~-~~---------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~--l~~~~~  144 (161)
                      .... + ..         ...... ......... ....+.....+.+++.+||+.||.+||++++++.|  ++.+..
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         229 KVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDF-STLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             HhcCCCCHHHHHHhcccchHHHHhhcCCcccchH-HHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence            0000 0 00         000000 000000000 00001234557899999999999999999999987  655543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.72  E-value=8.8e-18  Score=113.74  Aligned_cols=109  Identities=23%  Similarity=0.302  Sum_probs=74.8

Q ss_pred             eeeecccccccccCCCCccccccccccccccCCCCCC-CCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR-EGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~-~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      +|++|||++.....      .....++..|++||++. +..++.++||||+|+++|+++. |..|+........  ....
T Consensus       151 ~~l~d~g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~--~~~~  222 (262)
T cd05077         151 IKLSDPGIPITVLS------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK--ERFY  222 (262)
T ss_pred             eEeCCCCCCccccC------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH--HHHH
Confidence            78999999865432      12245788899999886 4568899999999999999984 7777754322111  0000


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ...    .      ..          .......+.+|+.+||+.||.+||++.+++++|
T Consensus       223 ~~~----~------~~----------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         223 EGQ----C------ML----------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             hcC----c------cC----------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            000    0      00          001123478999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.72  E-value=1.5e-17  Score=113.42  Aligned_cols=134  Identities=17%  Similarity=0.156  Sum_probs=83.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||.+........  ......++..|++||.+.+. .++.++|+||+|++++++++|+.||........ +....
T Consensus       136 ~~~l~df~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~-~~~~~  212 (283)
T cd05118         136 VLKLADFGLARSFGSPVR--PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ-LFKIF  212 (283)
T ss_pred             cEEEeeeeeeEecCCCcc--cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH
Confidence            479999999987643321  12334678889999988766 688999999999999999999999865433211 10000


Q ss_pred             hhhc---CCCCccccc------cccccchhh-hhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWL---PISTMEVVD------VNLLSQEDI-HFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~---~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ....   +........      ......... .....+..+..+.+++.+||..||.+||++.+++.|
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~  280 (283)
T cd05118         213 RTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH  280 (283)
T ss_pred             HHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence            0000   000000000      000000000 011123456789999999999999999999999876

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.72  E-value=5.6e-18  Score=117.98  Aligned_cols=114  Identities=18%  Similarity=0.300  Sum_probs=78.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......  .......||..|+|||++.+..++.++|+||+|++++++++|..||........ .. ...
T Consensus       139 ~ikL~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~-~~-~i~  214 (323)
T cd05615         139 HIKIADFGMCKEHMVDG--VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL-FQ-SIM  214 (323)
T ss_pred             CEEEeccccccccCCCC--ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHH-HH-HHH
Confidence            47999999987643211  122345689999999999888899999999999999999999999976432211 11 000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH-----HHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA-----KEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~-----~~vl~~  138 (161)
                      .   ...            .    .+...+..+.+++.+||+.+|.+|+++     ++++.|
T Consensus       215 ~---~~~------------~----~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h  257 (323)
T cd05615         215 E---HNV------------S----YPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREH  257 (323)
T ss_pred             h---CCC------------C----CCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC
Confidence            0   000            0    011223457889999999999999974     455555

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.72  E-value=2.6e-18  Score=119.47  Aligned_cols=109  Identities=20%  Similarity=0.195  Sum_probs=75.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....  ........|++.|++||++.+..++.++||||+|++++++++|..||.......  +.....
T Consensus       134 ~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~i~  209 (321)
T cd05603         134 HVVLTDFGLCKEGVEP--EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQ--MYDNIL  209 (321)
T ss_pred             CEEEccCCCCccCCCC--CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHH--HHHHHh
Confidence            4799999998753221  112334578999999999988889999999999999999999999996643211  111000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK  133 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~  133 (161)
                      .. +.                  ..+......+.+++.+||+.||.+|+++.
T Consensus       210 ~~-~~------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         210 HK-PL------------------QLPGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             cC-CC------------------CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence            00 00                  00112234478999999999999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.72  E-value=9.6e-18  Score=112.35  Aligned_cols=116  Identities=22%  Similarity=0.318  Sum_probs=80.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||.+........   .....++..|++||.+.+..++.++|+|++|++++++++|+.||............. .
T Consensus       136 ~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~  211 (253)
T cd05122         136 EVKLIDFGLSAQLSDTKA---RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIA-T  211 (253)
T ss_pred             eEEEeecccccccccccc---ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHH-h
Confidence            479999999887643221   234568889999999887778999999999999999999999986543211111100 0


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...+    ...             .....+..+.+++.+||..||++|||+.+++.|
T Consensus       212 ~~~~----~~~-------------~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~  251 (253)
T cd05122         212 NGPP----GLR-------------NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH  251 (253)
T ss_pred             cCCC----CcC-------------cccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            0000    000             011123458899999999999999999999876

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.72  E-value=6.9e-18  Score=115.56  Aligned_cols=117  Identities=23%  Similarity=0.262  Sum_probs=80.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||++.......  .......|+..|++||+..+..++.++|+||+|++++++++|..||.......  ......
T Consensus       153 ~~~l~d~g~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~--~~~~~~  228 (285)
T cd06648         153 RVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQ--AMKRIR  228 (285)
T ss_pred             cEEEcccccchhhccCC--cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHH--HHHHHH
Confidence            47899999887653221  11233568889999999988789999999999999999999999986532211  110001


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...+....                .....+..+.+++.+||.++|++|||+.++++|
T Consensus       229 ~~~~~~~~----------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  269 (285)
T cd06648         229 DNLPPKLK----------------NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH  269 (285)
T ss_pred             hcCCCCCc----------------ccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence            00000000                011133458899999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.72  E-value=8.1e-18  Score=117.71  Aligned_cols=135  Identities=19%  Similarity=0.185  Sum_probs=81.5

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++........ .......|+..|+|||++.+ ..++.++||||+|++++++++|+.||........ +. .
T Consensus       144 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~-~~-~  221 (336)
T cd07849         144 DLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQ-LN-L  221 (336)
T ss_pred             CEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HH-H
Confidence            4799999999875432211 11233568889999998654 4588899999999999999999999865332111 00 0


Q ss_pred             hhhhcCCCCccccc----cc-------cccchhhhh-hhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           80 VNDWLPISTMEVVD----VN-------LLSQEDIHF-VAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        80 ~~~~~~~~~~~~~~----~~-------~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ..........+...    ..       ......... ......+..+.+++.+||+.+|++|||+.+++.|
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         222 ILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             HHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            00000000000000    00       000000000 0011234568899999999999999999999998

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.72  E-value=5.8e-18  Score=113.99  Aligned_cols=115  Identities=28%  Similarity=0.459  Sum_probs=79.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.....     ......+..|++||.+.+..++.+.|+||+|++++++++ |..||.......  .....
T Consensus       138 ~~kl~Dfg~~~~~~~~-----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~~~~  210 (254)
T cd05083         138 VAKVSDFGLARVGSMG-----VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE--VKECV  210 (254)
T ss_pred             cEEECCCccceecccc-----CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH--HHHHH
Confidence            4799999998764211     112234567999999887789999999999999999997 888886543221  11110


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      .....                  .......+..+.+++.+||+.+|+.||++++++..|++
T Consensus       211 ~~~~~------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         211 EKGYR------------------MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             hCCCC------------------CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            00000                  00012234558899999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.72  E-value=4.2e-18  Score=115.03  Aligned_cols=119  Identities=27%  Similarity=0.475  Sum_probs=80.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+..... .......++..|++||...+..++.++|+||+|++++++++ |+.||....... .+....
T Consensus       141 ~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-~~~~~~  218 (261)
T cd05034         141 VCKIADFGLARLIEDDEY-TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE-VLEQVE  218 (261)
T ss_pred             CEEECccccceeccchhh-hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHH
Confidence            478999999887642111 11112234567999999988889999999999999999998 899986532211 111100


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      .. ..                  ...+...+..+.+++.+||..+|++||+++++...|+.
T Consensus       219 ~~-~~------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         219 RG-YR------------------MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             cC-CC------------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            00 00                  00011123458899999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.72  E-value=9.1e-18  Score=114.74  Aligned_cols=133  Identities=20%  Similarity=0.199  Sum_probs=79.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.....  ......++..|++||+..+.. ++.++|+||+|++++++++|+.||........ .....
T Consensus       138 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~-~~~~~  214 (284)
T cd07860         138 AIKLADFGLARAFGVPVR--TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ-LFRIF  214 (284)
T ss_pred             CEEEeeccchhhcccCcc--ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHH
Confidence            579999999876532211  123345678899999876544 68889999999999999999999865432211 11111


Q ss_pred             hhh-cCCCC-----ccccc--ccc--ccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDW-LPIST-----MEVVD--VNL--LSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~-~~~~~-----~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ... .+...     .....  ...  ....... ......+..+.+++.+||+.||++|||+++++.|
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~  281 (284)
T cd07860         215 RTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFS-KVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH  281 (284)
T ss_pred             HHhCCCChhhhhhhhHHHHHHhhcccccccCHH-HHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence            100 00000     00000  000  0000000 0011234557899999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.72  E-value=2.9e-18  Score=121.47  Aligned_cols=121  Identities=20%  Similarity=0.244  Sum_probs=79.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC----CCCCccchhhhHHHHHHHhcCCCCccccccccchh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR----VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~----~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~   77 (161)
                      .+||+|||+++....... ......+||+.|+|||++....    ++.++||||+|+++++|++|..||....... .+.
T Consensus       180 ~ikL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-~~~  257 (371)
T cd05622         180 HLKLADFGTCMKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-TYS  257 (371)
T ss_pred             CEEEEeCCceeEcCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH-HHH
Confidence            589999999987643221 1223467999999999986532    7889999999999999999999997532211 111


Q ss_pred             HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCccc--CCCHHHHHHHHH
Q 043981           78 HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQ--RINAKEIVTKLL  140 (161)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~--Rps~~~vl~~l~  140 (161)
                          .....            ......+.....+..+.+++.+||..++.+  |+++.++++|..
T Consensus       258 ----~i~~~------------~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~  306 (371)
T cd05622         258 ----KIMNH------------KNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF  306 (371)
T ss_pred             ----HHHcC------------CCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcc
Confidence                00000            000000111233455788999999844433  789999999864

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.72  E-value=6.9e-18  Score=118.11  Aligned_cols=140  Identities=16%  Similarity=0.113  Sum_probs=84.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCcccccccc-chhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM-TLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~-~~~~~   79 (161)
                      .+||+|||+++.......  ......++..|++||++.. ..++.++|+||+|++++++++|+.||........ .....
T Consensus       146 ~~kL~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~  223 (337)
T cd07858         146 DLKICDFGLARTTSEKGD--FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITE  223 (337)
T ss_pred             CEEECcCccccccCCCcc--cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHH
Confidence            479999999987543211  1233567889999998754 4588999999999999999999999865422111 00000


Q ss_pred             hhhhcC-CCCc--------cccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH--HHHhH
Q 043981           80 VNDWLP-ISTM--------EVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK--LLKIR  143 (161)
Q Consensus        80 ~~~~~~-~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~--l~~~~  143 (161)
                      ...... ....        .....................+..+.+++.+||+.+|++|||+++++.|  +..+.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~  298 (337)
T cd07858         224 LLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH  298 (337)
T ss_pred             HhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence            000000 0000        0000000000000000112345668999999999999999999999999  55443

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.72  E-value=5e-18  Score=127.97  Aligned_cols=120  Identities=19%  Similarity=0.215  Sum_probs=82.4

Q ss_pred             eeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhhh
Q 043981            3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVND   82 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~~   82 (161)
                      +++.|||.++..............+||+.|++||++.+..++.++||||+||++||+++|..||.+...... +......
T Consensus       517 ~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~-~~~il~~  595 (669)
T cd05610         517 KIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQV-FQNILNR  595 (669)
T ss_pred             cccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHhc
Confidence            356688887765433222233456899999999999988899999999999999999999999975433211 1110000


Q ss_pred             hcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           83 WLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ..+  .     ...          .......+.+++.+||..||.+||++.+++.|-+
T Consensus       596 ~~~--~-----p~~----------~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h~~  636 (669)
T cd05610         596 DIP--W-----PEG----------EEKLSVNAQNAIEILLTMDPTKRAGLKELKQHPL  636 (669)
T ss_pred             CCC--C-----Ccc----------cccCCHHHHHHHHHHcccChhHCcCHHHHHhCHh
Confidence            000  0     000          0122344778999999999999999999999965

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.72  E-value=9.5e-18  Score=117.41  Aligned_cols=136  Identities=22%  Similarity=0.196  Sum_probs=81.9

Q ss_pred             ceeeecccccccccCCCCc---cccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchh
Q 043981            2 VAHLSDFSIAKLLTGEDQS---MTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~---~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~   77 (161)
                      .+||+|||+++........   .......|+..|++||++.+ ..++.++|+||+|++++++++|+.||........ ..
T Consensus       145 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~  223 (337)
T cd07852         145 RVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LE  223 (337)
T ss_pred             cEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HH
Confidence            5799999999876432211   12233568889999998765 3478899999999999999999999865332211 10


Q ss_pred             HHhhhhcCCC-----------CccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           78 HWVNDWLPIS-----------TMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        78 ~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ..........           .......................+..+.+++.+||+.+|++|||+.+++.|
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         224 KIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence            0000000000           000000000000000000011235668999999999999999999999987

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=1e-18  Score=121.98  Aligned_cols=116  Identities=20%  Similarity=0.234  Sum_probs=77.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.......  ......||..|++||++.+. .++.++||||+|++++++++|+.||........  ..  
T Consensus       134 ~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~--~~--  207 (330)
T cd05586         134 HIALCDFGLSKANLTDNK--TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQM--YR--  207 (330)
T ss_pred             CEEEecCCcCcCCCCCCC--CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHH--HH--
Confidence            479999999876432211  22345789999999988654 488999999999999999999999865332211  10  


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC----CHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI----NAKEIVTKL  139 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp----s~~~vl~~l  139 (161)
                       ......      ... .        ....+..+.+++.+||..||.+||    ++.+++.|-
T Consensus       208 -~i~~~~------~~~-~--------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~  254 (330)
T cd05586         208 -NIAFGK------VRF-P--------KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHP  254 (330)
T ss_pred             -HHHcCC------CCC-C--------CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCc
Confidence             000000      000 0        011234578899999999999998    577777763

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.71  E-value=1.1e-17  Score=114.36  Aligned_cols=135  Identities=21%  Similarity=0.214  Sum_probs=81.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .++|+|||++........ .......++..|++||++.+.. ++.++||||+|++++++++|..+|....... .+....
T Consensus       137 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~-~~~~~~  214 (286)
T cd07832         137 VLKIADFGLARLFSEEEP-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIE-QLAIVF  214 (286)
T ss_pred             cEEEeeeeecccccCCCC-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHH-HHHHHH
Confidence            478999999987643221 1123356888999999886544 6889999999999999999987775533211 111000


Q ss_pred             hhhcCC---CCc---ccccccc---ccchhhh-hhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLPI---STM---EVVDVNL---LSQEDIH-FVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~~---~~~---~~~~~~~---~~~~~~~-~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ......   ...   ...+...   ....... .......+..+.+++.+||.++|.+|||+++++.|
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         215 RTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             HHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            000000   000   0000000   0000000 00012334678999999999999999999999987

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.71  E-value=9.1e-18  Score=113.03  Aligned_cols=117  Identities=31%  Similarity=0.555  Sum_probs=79.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++......... .....++..|++||...+..++.++|+|++|++++++++ |..||......  .+....
T Consensus       141 ~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~--~~~~~~  217 (258)
T smart00219      141 VVKISDFGLSRDLYDDDYYK-KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE--EVLEYL  217 (258)
T ss_pred             eEEEcccCCceecccccccc-cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH
Confidence            47999999998764332211 112336788999999877778999999999999999998 77777542211  111111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ......                  ......+..+.+++.+||..+|+.|||+.++++.|
T Consensus       218 ~~~~~~------------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      218 KKGYRL------------------PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             hcCCCC------------------CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            100000                  00112345588999999999999999999998754

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.71  E-value=1.2e-18  Score=121.06  Aligned_cols=114  Identities=24%  Similarity=0.301  Sum_probs=78.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......  .......|+..|++||++.+..++.++||||+|++++++++|+.||........ ..    
T Consensus       136 ~~kL~Dfg~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~-~~----  208 (318)
T cd05582         136 HIKLTDFGLSKESIDHE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET-MT----  208 (318)
T ss_pred             cEEEeeccCCcccCCCC--CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH-HH----
Confidence            47999999987653221  122345789999999999888889999999999999999999999965432111 10    


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH-----HHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA-----KEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~-----~~vl~~  138 (161)
                      .......            .    .+...+..+.+|+.+||+.||++||++     .+++.|
T Consensus       209 ~i~~~~~------------~----~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~  254 (318)
T cd05582         209 MILKAKL------------G----MPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRH  254 (318)
T ss_pred             HHHcCCC------------C----CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCC
Confidence            0000000            0    011223457899999999999999994     556654

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.71  E-value=1.9e-17  Score=113.62  Aligned_cols=135  Identities=17%  Similarity=0.198  Sum_probs=79.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.......  ......++..|++||++.+. .++.++|+||+|++++++++|..||.........+....
T Consensus       141 ~~~l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~  218 (291)
T cd07870         141 ELKLADFGLARAKSIPSQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIW  218 (291)
T ss_pred             cEEEeccccccccCCCCC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHH
Confidence            479999999876432211  12334578899999988654 478889999999999999999999976443211111111


Q ss_pred             hhh-cCC-C-------Ccccccccc--ccchhhhhh-hhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDW-LPI-S-------TMEVVDVNL--LSQEDIHFV-AKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~-~~~-~-------~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ... .+. .       .........  ......... ........+.+++.+|+..||.+|||+++++.|
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h  288 (291)
T cd07870         219 TVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH  288 (291)
T ss_pred             HHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence            000 000 0       000000000  000000000 000113457899999999999999999999875

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.71  E-value=9.9e-18  Score=112.89  Aligned_cols=115  Identities=22%  Similarity=0.219  Sum_probs=80.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||.+........  ......|+..|++||+.....++.++|+||+|++++++++|..||.........     .
T Consensus       140 ~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-----~  212 (257)
T cd08225         140 VAKLGDFGIARQLNDSME--LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLV-----L  212 (257)
T ss_pred             eEEecccccchhccCCcc--cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHH-----H
Confidence            368999999887643221  122345888999999988778899999999999999999999998653322111     1


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .........               .....+..+.+++.+||..+|++|||+.+++.|
T Consensus       213 ~~~~~~~~~---------------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         213 KICQGYFAP---------------ISPNFSRDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             HHhcccCCC---------------CCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            111000000               011223458899999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.71  E-value=2.9e-17  Score=114.07  Aligned_cols=117  Identities=24%  Similarity=0.365  Sum_probs=80.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC---CCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~---~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||++.....      .....++..|++||++.   ...++.++|+||+|++++++++|+.||........ ...
T Consensus       163 ~~kl~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~~  235 (317)
T cd06635         163 QVKLADFGSASIASP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYH  235 (317)
T ss_pred             CEEEecCCCccccCC------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH-HHH
Confidence            478999999865422      12346788999999874   34588899999999999999999999865322111 111


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                      ......+.                  ......+..+.+++.+||+.+|.+||++.+++.|+..+.
T Consensus       236 ~~~~~~~~------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~  282 (317)
T cd06635         236 IAQNESPT------------------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR  282 (317)
T ss_pred             HHhccCCC------------------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence            00000000                  001123345889999999999999999999999876443

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.71  E-value=5.4e-17  Score=127.12  Aligned_cols=118  Identities=25%  Similarity=0.439  Sum_probs=82.6

Q ss_pred             ccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhhhhcC-CCCccccccccccchhhhh
Q 043981           26 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLP-ISTMEVVDVNLLSQEDIHF  104 (161)
Q Consensus        26 ~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  104 (161)
                      ..++..|+|||++.+..++.++||||||+++||+++|+.||............+...... .......++.....    .
T Consensus       838 ~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  913 (968)
T PLN00113        838 CFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGD----V  913 (968)
T ss_pred             ccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCC----C
Confidence            357889999999988889999999999999999999999986544433444444432221 11111222211111    0


Q ss_pred             hhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhh
Q 043981          105 VAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus       105 ~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                      ........++.+++.+||+.||++|||+.++++.|+++.+...
T Consensus       914 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~  956 (968)
T PLN00113        914 SVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSSS  956 (968)
T ss_pred             CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcccc
Confidence            1123345568899999999999999999999999998876443

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.71  E-value=6e-18  Score=114.08  Aligned_cols=120  Identities=23%  Similarity=0.296  Sum_probs=80.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC-CCCCCCCccchhhhHHHHHHHhcCCCCcccccccc-chhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR-EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM-TLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~-~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~-~~~~~   79 (161)
                      .++|+|||.+..+..  .........++..|+|||++. +..++.++|+||+|++++++++|..||........ .....
T Consensus       136 ~~~l~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~  213 (260)
T PF00069_consen  136 EVKLIDFGSSVKLSE--NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEK  213 (260)
T ss_dssp             EEEESSGTTTEESTS--TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHH
T ss_pred             ccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhh
Confidence            468999999976421  122334567889999999987 67789999999999999999999999876411111 11000


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...               ................+.+++.+||+.||++|||+.++++|
T Consensus       214 ~~~---------------~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~  257 (260)
T PF00069_consen  214 ILK---------------RPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH  257 (260)
T ss_dssp             HHH---------------THHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred             ccc---------------ccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            000               00000000001112568999999999999999999999876

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.71  E-value=5.1e-18  Score=120.61  Aligned_cols=97  Identities=25%  Similarity=0.330  Sum_probs=65.6

Q ss_pred             ccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhhhhcCCCCccccccccccchhhhhh
Q 043981           26 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFV  105 (161)
Q Consensus        26 ~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (161)
                      .+||..|+|||++.+..++.++||||+||+++++++|..||...........  ...+.. ..              ..+
T Consensus       208 ~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~--i~~~~~-~~--------------~~~  270 (381)
T cd05626         208 LVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLK--VINWEN-TL--------------HIP  270 (381)
T ss_pred             ccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHH--HHcccc-cc--------------CCC
Confidence            5799999999999888899999999999999999999999976443221111  000000 00              000


Q ss_pred             hhHHHHHHHHHHHHH--hcccCcccCCCHHHHHHHH
Q 043981          106 AKEQCVSFVFNLAMA--CTVESPEQRINAKEIVTKL  139 (161)
Q Consensus       106 ~~~~~~~~~~~l~~~--cl~~dp~~Rps~~~vl~~l  139 (161)
                      .....+.++.+|+.+  |+..++..|+++.+++.|-
T Consensus       271 ~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp  306 (381)
T cd05626         271 PQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHP  306 (381)
T ss_pred             CCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCc
Confidence            011223457788877  4455666699999999984

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=8.6e-18  Score=113.43  Aligned_cols=113  Identities=23%  Similarity=0.303  Sum_probs=82.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccccc-chhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM-TLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~-~~~~~~   80 (161)
                      ++||+|||+++.-...+  .....++||+.|.|||++....|....|.|.+|+++|||+.|+.||...+.+.. .++-  
T Consensus       306 HIKitDFGLCKE~I~~g--~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl--  381 (516)
T KOG0690|consen  306 HIKITDFGLCKEEIKYG--DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELIL--  381 (516)
T ss_pred             ceEeeecccchhccccc--ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHH--
Confidence            68999999998743322  234678999999999999999999999999999999999999999987554322 1110  


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCC-----HHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRIN-----AKEIVTK  138 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~vl~~  138 (161)
                                        .++...  +...+++...|+...|..||.+|.-     ++++.+|
T Consensus       382 ------------------~ed~kF--Pr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h  424 (516)
T KOG0690|consen  382 ------------------MEDLKF--PRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH  424 (516)
T ss_pred             ------------------hhhccC--CccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence                              000000  2233455788999999999999973     4555544

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.71  E-value=1.9e-17  Score=111.85  Aligned_cols=109  Identities=26%  Similarity=0.361  Sum_probs=74.5

Q ss_pred             eeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcC-CCCccccccccchhHHh
Q 043981            3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGK-KPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~-~p~~~~~~~~~~~~~~~   80 (161)
                      +|++|||++.....      .....++..|++||++.+. .++.++|+||+|++++++++|. .|+........ .. ..
T Consensus       147 ~~l~d~g~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~-~~-~~  218 (258)
T cd05078         147 IKLSDPGISITVLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK-LQ-FY  218 (258)
T ss_pred             EEecccccccccCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH-HH-HH
Confidence            68999998865422      1234577889999998764 4788999999999999999985 55543222111 00 00


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ..  ..              ..    +......+.+++.+||+.+|++|||++++++.|
T Consensus       219 ~~--~~--------------~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l  257 (258)
T cd05078         219 ED--RH--------------QL----PAPKWTELANLINQCMDYEPDFRPSFRAIIRDL  257 (258)
T ss_pred             Hc--cc--------------cC----CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            00  00              00    011123478999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.71  E-value=1.5e-17  Score=113.74  Aligned_cols=133  Identities=21%  Similarity=0.239  Sum_probs=80.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||++........  ......++..|++||+..+. .++.++||||+|++++++++|..||....... .+....
T Consensus       138 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~~~~  214 (286)
T cd07846         138 VVKLCDFGFARTLAAPGE--VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID-QLYHII  214 (286)
T ss_pred             cEEEEeeeeeeeccCCcc--ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH-HHHHHH
Confidence            479999999887543221  22335678899999988653 36788999999999999999998886533211 110000


Q ss_pred             hhhc--CCCCccc----------cccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWL--PISTMEV----------VDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~--~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ....  .......          ..+....... ........+..+.+++.+||..+|++||++.+++.|
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  283 (286)
T cd07846         215 KCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEP-LEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH  283 (286)
T ss_pred             HHhCCCchhhHHHhccchHhhccccccccCcch-HHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence            0000  0000000          0000000000 000012345668999999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.71  E-value=2.7e-17  Score=112.31  Aligned_cols=116  Identities=19%  Similarity=0.266  Sum_probs=79.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+...    ......|+..|++||++.+. .++.++|+||+|++++++++|..||..............
T Consensus       135 ~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~  210 (278)
T cd05606         135 HVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM  210 (278)
T ss_pred             CEEEccCcCccccCcc----CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHH
Confidence            4789999998765321    12335689999999998754 588999999999999999999999865422111110000


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTKL  139 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~l  139 (161)
                      .....                  ...+...+..+.+++.+||..+|..||     ++.++++|-
T Consensus       211 ~~~~~------------------~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~  256 (278)
T cd05606         211 TLTMA------------------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHP  256 (278)
T ss_pred             hhccC------------------CCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCc
Confidence            00000                  000112245588999999999999999     999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=1.4e-17  Score=113.57  Aligned_cols=119  Identities=21%  Similarity=0.289  Sum_probs=79.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC-----CCCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR-----EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~-----~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||++......  ........++..|++||++.     ...++.++|+||+|+++|++++|..||........ +
T Consensus       141 ~~~l~d~g~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~-~  217 (280)
T cd06611         141 DVKLADFGVSAKNKST--LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV-L  217 (280)
T ss_pred             CEEEccCccchhhccc--ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHH-H
Confidence            4789999988764321  11223356888999999874     33477889999999999999999999865432211 1


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ... ....+..                ...+...+..+.+++.+||+.+|.+||++.++++|-.
T Consensus       218 ~~~-~~~~~~~----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~  264 (280)
T cd06611         218 LKI-LKSEPPT----------------LDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPF  264 (280)
T ss_pred             HHH-hcCCCCC----------------cCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChh
Confidence            110 0000000                0001123345789999999999999999999998844

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.70  E-value=5.7e-18  Score=119.90  Aligned_cols=121  Identities=18%  Similarity=0.219  Sum_probs=78.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC----CCCCccchhhhHHHHHHHhcCCCCccccccccchh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR----VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~----~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~   77 (161)
                      .+||+|||+++.+..... .......||+.|+|||++.+..    ++.++|+||+|++++++++|..||....... .+.
T Consensus       180 ~~kL~DFG~a~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~-~~~  257 (370)
T cd05621         180 HLKLADFGTCMKMDETGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVG-TYS  257 (370)
T ss_pred             CEEEEecccceecccCCc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHH-HHH
Confidence            589999999987632211 1224467999999999986532    7889999999999999999999996533211 111


Q ss_pred             HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCccc--CCCHHHHHHHHH
Q 043981           78 HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQ--RINAKEIVTKLL  140 (161)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~--Rps~~~vl~~l~  140 (161)
                      ........                ...+.....+..+.+++.+||..++.+  |+|+.+++.|-.
T Consensus       258 ~i~~~~~~----------------~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~  306 (370)
T cd05621         258 KIMDHKNS----------------LNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPF  306 (370)
T ss_pred             HHHhCCcc----------------cCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcc
Confidence            10000000                000001122345778899999865543  889999999854

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.70  E-value=2e-17  Score=113.60  Aligned_cols=133  Identities=19%  Similarity=0.157  Sum_probs=80.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.....  ......+++.|++||++.+ ..++.++|+||+|++++++++|..||........ +....
T Consensus       149 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~  225 (295)
T cd07837         149 LLKIADLGLGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ-LLHIF  225 (295)
T ss_pred             eEEEeecccceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHH
Confidence            479999999986532211  1122356788999998765 3478999999999999999999999865332111 11110


Q ss_pred             hhhc-CC--CCcccccc------ccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWL-PI--STMEVVDV------NLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~-~~--~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .... +.  ........      ........ .......+..+.+|+.+||.+||.+|||+.+++.|
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~  291 (295)
T cd07837         226 KLLGTPTEQVWPGVSKLRDWHEFPQWKPQDL-SRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH  291 (295)
T ss_pred             HHhCCCChhhCcchhhccchhhcCcccchhH-HHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence            0000 00  00000000      00000000 00012345668899999999999999999999876

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.70  E-value=5.2e-18  Score=112.63  Aligned_cols=103  Identities=17%  Similarity=0.185  Sum_probs=75.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      ++||+|||+|+...+     +....+||+.|+|||++.+..|+.++|.|+||+++|||+.|.+||....+. ..+...+ 
T Consensus       182 ~iKitDFGFAK~v~~-----rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~-~iY~KI~-  254 (355)
T KOG0616|consen  182 HIKITDFGFAKRVSG-----RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI-QIYEKIL-  254 (355)
T ss_pred             cEEEEeccceEEecC-----cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH-HHHHHHH-
Confidence            479999999988642     245578999999999999999999999999999999999999999764441 1111110 


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI  130 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp  130 (161)
                                     ..+..+    +.-.+..+.+|+...|+.|-.+|.
T Consensus       255 ---------------~~~v~f----P~~fs~~~kdLl~~LL~vD~t~R~  284 (355)
T KOG0616|consen  255 ---------------EGKVKF----PSYFSSDAKDLLKKLLQVDLTKRF  284 (355)
T ss_pred             ---------------hCcccC----CcccCHHHHHHHHHHHhhhhHhhh
Confidence                           011111    122234478899999999999884

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.70  E-value=4.6e-17  Score=109.77  Aligned_cols=110  Identities=25%  Similarity=0.391  Sum_probs=76.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC--CCCCCccchhhhHHHHHHHh-cCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG--RVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~--~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||+++....      .....++..|++||++.+.  .++.++|+||+|++++++++ +..|+.......  ...
T Consensus       146 ~~kl~Dfg~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~--~~~  217 (259)
T cd05037         146 FIKLSDPGIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE--KER  217 (259)
T ss_pred             eEEeCCCCccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh--HHH
Confidence            479999999876532      1224566789999998776  68899999999999999999 566765543211  110


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      .......                ...+    ....+.+++.+||..+|.+|||+.++++.|
T Consensus       218 ~~~~~~~----------------~~~~----~~~~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         218 FYQDQHR----------------LPMP----DCAELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             HHhcCCC----------------CCCC----CchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            0000000                0000    014588999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.70  E-value=2.4e-17  Score=112.62  Aligned_cols=135  Identities=21%  Similarity=0.201  Sum_probs=81.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++....... .......++..|++||.+.+. .++.++|||+||++++++++|+.||....... .+....
T Consensus       138 ~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~-~~~~~~  215 (287)
T cd07840         138 VLKLADFGLARPYTKRNS-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE-QLEKIF  215 (287)
T ss_pred             CEEEccccceeeccCCCc-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHH
Confidence            579999999987643221 112334567889999977643 47889999999999999999999987644321 111111


Q ss_pred             hhhc---CCCCccccc--------cccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWL---PISTMEVVD--------VNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~---~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ....   ........+        ................++..+.+++.+||..+|.+||++.+++.|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  284 (287)
T cd07840         216 ELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH  284 (287)
T ss_pred             HHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            1000   000000000        000000000000011125678999999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.70  E-value=8.6e-17  Score=109.21  Aligned_cols=122  Identities=23%  Similarity=0.377  Sum_probs=74.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-------CCCCCCccchhhhHHHHHHHh-cCCCCccccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-------GRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEE   73 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-------~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~   73 (161)
                      .+||+|||++................++..|++||++..       ..++.++||||||++++++++ +..||.......
T Consensus       137 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~  216 (268)
T cd05086         137 TVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE  216 (268)
T ss_pred             cEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            479999999864322111112234567889999998743       235778999999999999997 566775432211


Q ss_pred             cchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           74 MTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                       .+.......    ......+..          .......+.+++..|| .+|++||+++++++.|
T Consensus       217 -~~~~~~~~~----~~~~~~~~~----------~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l  266 (268)
T cd05086         217 -VLNHVIKDQ----QVKLFKPQL----------ELPYSERWYEVLQFCW-LSPEKRATAEEVHRLL  266 (268)
T ss_pred             -HHHHHHhhc----ccccCCCcc----------CCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence             111100000    000111110          0112234677899999 6799999999998876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=4.8e-18  Score=120.05  Aligned_cols=96  Identities=21%  Similarity=0.266  Sum_probs=66.6

Q ss_pred             ccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhhhhcCCCCccccccccccchhhhhh
Q 043981           26 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFV  105 (161)
Q Consensus        26 ~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (161)
                      .+||+.|+|||++....++.++||||+||+++++++|..||........  ......+... .              ..+
T Consensus       199 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~--~~~i~~~~~~-~--------------~~~  261 (364)
T cd05599         199 TVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQET--YRKIINWKET-L--------------QFP  261 (364)
T ss_pred             cccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHH--HHHHHcCCCc-c--------------CCC
Confidence            4689999999999888899999999999999999999999975433211  1000000000 0              000


Q ss_pred             hhHHHHHHHHHHHHHhcccCcccCCC---HHHHHHHH
Q 043981          106 AKEQCVSFVFNLAMACTVESPEQRIN---AKEIVTKL  139 (161)
Q Consensus       106 ~~~~~~~~~~~l~~~cl~~dp~~Rps---~~~vl~~l  139 (161)
                      .....++.+.+++.+|+. +|.+|++   +.+++.|-
T Consensus       262 ~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~  297 (364)
T cd05599         262 DEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHP  297 (364)
T ss_pred             CCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCC
Confidence            001123457889999996 9999998   99998874

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.70  E-value=2.1e-17  Score=111.24  Aligned_cols=113  Identities=22%  Similarity=0.256  Sum_probs=81.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....    ......++..|++||.+.+..++.++|+||+|++++++++|..||.......  +.....
T Consensus       141 ~~kl~d~g~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~--~~~~~~  214 (256)
T cd08530         141 LVKIGDLGISKVLKKN----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD--LRYKVQ  214 (256)
T ss_pred             cEEEeeccchhhhccC----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHh
Confidence            4789999999876432    1223457889999999988888999999999999999999999986543221  111000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .   ...         .      ......+..+.+++.+||..+|++|||+.+++.|
T Consensus       215 ~---~~~---------~------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         215 R---GKY---------P------PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             c---CCC---------C------CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            0   000         0      0012344568999999999999999999999876

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=1.8e-17  Score=112.88  Aligned_cols=118  Identities=25%  Similarity=0.406  Sum_probs=80.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .++|+|||++..+.....  ......|+..|++||..... .++.++|+||+|++++++++|..||........  ....
T Consensus       139 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~--~~~~  214 (277)
T cd06917         139 NVKLCDFGVAALLNQNSS--KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA--MMLI  214 (277)
T ss_pred             CEEEccCCceeecCCCcc--ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh--hhcc
Confidence            478999999987643221  22335688899999987643 478899999999999999999999865322111  0000


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ....+        ... .        ....+..+.+++.+||..||++||++.+++.|-.
T Consensus       215 ~~~~~--------~~~-~--------~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~  257 (277)
T cd06917         215 PKSKP--------PRL-E--------DNGYSKLLREFVAACLDEEPKERLSAEELLKSKW  257 (277)
T ss_pred             ccCCC--------CCC-C--------cccCCHHHHHHHHHHcCCCcccCcCHHHHhhChH
Confidence            00000        000 0        0012345889999999999999999999988643

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.70  E-value=5.9e-17  Score=109.80  Aligned_cols=121  Identities=24%  Similarity=0.302  Sum_probs=81.7

Q ss_pred             ceeeecccccccccCCCCc--cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQS--MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~--~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||.+..+......  .......++..|++||++.+..++.++|+|++|++++++++|..||..........  .
T Consensus       142 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~--~  219 (268)
T cd06630         142 RLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA--L  219 (268)
T ss_pred             EEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHH--H
Confidence            3799999998876432111  11223467889999999988788999999999999999999999986432211100  0


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .........              ....+...+..+.+++.+||..+|+.|||+.+++.|
T Consensus       220 ~~~~~~~~~--------------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~  264 (268)
T cd06630         220 IFKIASATT--------------APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH  264 (268)
T ss_pred             HHHHhccCC--------------CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence            000000000              000122344568899999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.70  E-value=2.6e-17  Score=115.11  Aligned_cols=140  Identities=17%  Similarity=0.143  Sum_probs=84.3

Q ss_pred             ceeeecccccccccCCCCc--cccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCcccccccc-chh
Q 043981            2 VAHLSDFSIAKLLTGEDQS--MTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM-TLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~--~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~-~~~   77 (161)
                      .+||+|||++.........  .......|+..|++||++.+ ..++.++|+||+|++++++++|+.||........ ...
T Consensus       145 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~  224 (334)
T cd07855         145 ELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLI  224 (334)
T ss_pred             cEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHH
Confidence            4799999999875432221  11123468889999998765 3488999999999999999999999965432211 000


Q ss_pred             HHhhhhcCCCCcc---------ccccccccchhhh-hhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           78 HWVNDWLPISTME---------VVDVNLLSQEDIH-FVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        78 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ......++.....         ... ......... .......+..+.+++.+||+.+|++|||+.+++.|-+--
T Consensus       225 ~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~  298 (334)
T cd07855         225 LSVLGSPSEEVLNRIGSDRVRKYIQ-NLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLA  298 (334)
T ss_pred             HHHhCCChhHhhhhhchhhHHHHHh-hcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhh
Confidence            0000000000000         000 000000000 000122356789999999999999999999999976543

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.70  E-value=3.9e-18  Score=118.83  Aligned_cols=109  Identities=23%  Similarity=0.224  Sum_probs=75.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....  ........|+..|++||++.+..++.++||||+|++++++++|..||........ +.    
T Consensus       134 ~~kL~DfG~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~-~~----  206 (325)
T cd05604         134 HVVLTDFGLCKEGIAQ--SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEM-YD----  206 (325)
T ss_pred             CEEEeecCCcccCCCC--CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHH-HH----
Confidence            4799999998753221  1122345789999999999888899999999999999999999999965432211 11    


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK  133 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~  133 (161)
                      .......            ..    ....+..+.+++.+||+.+|.+||++.
T Consensus       207 ~~~~~~~------------~~----~~~~~~~~~~ll~~ll~~~p~~R~~~~  242 (325)
T cd05604         207 NILHKPL------------VL----RPGASLTAWSILEELLEKDRQRRLGAK  242 (325)
T ss_pred             HHHcCCc------------cC----CCCCCHHHHHHHHHHhccCHHhcCCCC
Confidence            0000000            00    111234477899999999999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.70  E-value=6.6e-18  Score=120.09  Aligned_cols=95  Identities=25%  Similarity=0.356  Sum_probs=64.9

Q ss_pred             ccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhhhhcCCCCccccccccccchhhhhh
Q 043981           26 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFV  105 (161)
Q Consensus        26 ~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (161)
                      .+||+.|+|||++.+..++.++||||+||+++++++|..||........... . ..+.. .              ...+
T Consensus       208 ~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~-i-~~~~~-~--------------~~~p  270 (382)
T cd05625         208 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMK-V-INWQT-S--------------LHIP  270 (382)
T ss_pred             cccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHH-H-HccCC-C--------------cCCC
Confidence            4689999999999888899999999999999999999999976433211111 0 00000 0              0000


Q ss_pred             hhHHHHHHHHHHHHHhcccCcccCCC---HHHHHHH
Q 043981          106 AKEQCVSFVFNLAMACTVESPEQRIN---AKEIVTK  138 (161)
Q Consensus       106 ~~~~~~~~~~~l~~~cl~~dp~~Rps---~~~vl~~  138 (161)
                      .....++++.+++.+|+ .+|.+|++   +.+++.|
T Consensus       271 ~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h  305 (382)
T cd05625         271 PQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH  305 (382)
T ss_pred             CcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence            01122344677787765 59999997   8888877

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.70  E-value=2.4e-17  Score=111.64  Aligned_cols=117  Identities=21%  Similarity=0.183  Sum_probs=78.8

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++........ .......++..|++||++.+..++.++|+||||++++++++|+.||........ .... 
T Consensus       144 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-~~~~-  221 (265)
T cd06652         144 NVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA-IFKI-  221 (265)
T ss_pred             CEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH-HHHH-
Confidence            4799999999865321111 112234588899999999887889999999999999999999999864321111 1100 


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                       ...+.                ....+......+.+++.+||. +|++||++++++.|
T Consensus       222 -~~~~~----------------~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~  261 (265)
T cd06652         222 -ATQPT----------------NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH  261 (265)
T ss_pred             -hcCCC----------------CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence             00000                000122334557889999985 99999999999876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.70  E-value=3e-17  Score=114.49  Aligned_cols=137  Identities=18%  Similarity=0.107  Sum_probs=84.8

Q ss_pred             ceeeecccccccccCCCC-ccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQ-SMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~-~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .++|+|||++........ ........++..|++||++.+. .++.++|+||+|++++++++|..||........ +...
T Consensus       141 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~-~~~i  219 (330)
T cd07834         141 DLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ-LNLI  219 (330)
T ss_pred             CEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH-HHHH
Confidence            579999999987643221 0122345678899999999877 689999999999999999999999976543211 1000


Q ss_pred             hhhh--cCC-CC--------ccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           80 VNDW--LPI-ST--------MEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        80 ~~~~--~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ....  ++. ..        ......................+..+.+++.+||+.+|.+|||+.+++.|-
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~  290 (330)
T cd07834         220 VEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHP  290 (330)
T ss_pred             HHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCc
Confidence            0000  000 00        000000000000000000122356689999999999999999999999973

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.70  E-value=1.7e-17  Score=127.38  Aligned_cols=93  Identities=18%  Similarity=0.239  Sum_probs=64.6

Q ss_pred             ccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhhhhcCCCCccccccccccchhhhhh
Q 043981           26 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFV  105 (161)
Q Consensus        26 ~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (161)
                      ..||++|+|||++.+..++.++|||||||+++||+++..|+.....   .+........+             ..     
T Consensus       175 ~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---~~~~~~~~~~~-------------~~-----  233 (793)
T PLN00181        175 AMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---TMSSLRHRVLP-------------PQ-----  233 (793)
T ss_pred             cCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---HHHHHHHhhcC-------------hh-----
Confidence            4688999999999888899999999999999999998777542111   11111000000             00     


Q ss_pred             hhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981          106 AKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus       106 ~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                       ..........++.+||+.+|.+||++.++++|-.
T Consensus       234 -~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~  267 (793)
T PLN00181        234 -ILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEF  267 (793)
T ss_pred             -hhhcCHHHHHHHHHhCCCChhhCcChHHHhhchh
Confidence             0011223457888999999999999999998754

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.70  E-value=1.9e-18  Score=127.57  Aligned_cols=117  Identities=24%  Similarity=0.360  Sum_probs=85.5

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      .++|+|||+++.+..+..+ .+.....||-+|+|||++....-..++||+|+||+++.+++ |..||.....++..+.. 
T Consensus       649 ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~-  727 (903)
T KOG1027|consen  649 RAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILT-  727 (903)
T ss_pred             eEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhc-
Confidence            5799999999998665443 23456779999999999988777889999999999999988 57899775554332221 


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                                ...+......       ..++  +..+||.+|+.++|..||+|.+|+.|
T Consensus       728 ----------~~~~L~~L~~-------~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~H  767 (903)
T KOG1027|consen  728 ----------GNYTLVHLEP-------LPDC--EAKDLISRMLNPDPQLRPSATDVLNH  767 (903)
T ss_pred             ----------Cccceeeecc-------CchH--HHHHHHHHhcCCCcccCCCHHHHhCC
Confidence                      0000000000       1122  68899999999999999999999977

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.70  E-value=3.5e-17  Score=110.03  Aligned_cols=119  Identities=25%  Similarity=0.276  Sum_probs=82.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||.+................++..|++||...+...+.++|+|++|++++++++|..||...............
T Consensus       139 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  218 (260)
T cd06606         139 VVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS  218 (260)
T ss_pred             CEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc
Confidence            47899999998764332211123456888999999998877999999999999999999999998654411111100000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                         ....               ...+...+..+.+++.+||+.+|.+||++.+++.|
T Consensus       219 ---~~~~---------------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~  257 (260)
T cd06606         219 ---SGEP---------------PEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH  257 (260)
T ss_pred             ---cCCC---------------cCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence               0000               00012224568899999999999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.70  E-value=3.3e-17  Score=112.13  Aligned_cols=120  Identities=24%  Similarity=0.324  Sum_probs=81.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||++........  ......++..|++||++.+..++.++|+||+|++++++++|..||........... ...
T Consensus       154 ~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~-~~~  230 (286)
T cd06614         154 SVKLADFGFAAQLTKEKS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFL-ITT  230 (286)
T ss_pred             CEEECccchhhhhccchh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHh
Confidence            478999998876532211  22334577889999998888899999999999999999999999864322211110 000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ...+    .             .......+..+.+++.+||+.+|.+|||+.+++.|..-
T Consensus       231 ~~~~----~-------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~  273 (286)
T cd06614         231 KGIP----P-------------LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFL  273 (286)
T ss_pred             cCCC----C-------------CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHh
Confidence            0000    0             00011234558899999999999999999999876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.70  E-value=2.8e-17  Score=125.40  Aligned_cols=125  Identities=18%  Similarity=0.242  Sum_probs=83.8

Q ss_pred             ceeeecccccccccCCCC----------------ccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCC
Q 043981            2 VAHLSDFSIAKLLTGEDQ----------------SMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP   65 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~----------------~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p   65 (161)
                      .+||+|||+++.......                .......+||+.|+|||++.+..++.++||||+|++++++++|..|
T Consensus       151 ~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~P  230 (932)
T PRK13184        151 EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFP  230 (932)
T ss_pred             CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCC
Confidence            478999999987521110                0011235699999999999888899999999999999999999999


Q ss_pred             CccccccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-CHHHHHHHHHHhHH
Q 043981           66 TDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-NAKEIVTKLLKIRD  144 (161)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-s~~~vl~~l~~~~~  144 (161)
                      |............   .     ..   .+.       ........+..+.+++.+||..||++|+ +++++.+.|+...+
T Consensus       231 F~~~~~~ki~~~~---~-----i~---~P~-------~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq  292 (932)
T PRK13184        231 YRRKKGRKISYRD---V-----IL---SPI-------EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ  292 (932)
T ss_pred             CCCcchhhhhhhh---h-----cc---Chh-------hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            8653222111100   0     00   000       0000123345578899999999999997 46777777777654

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.70  E-value=2.2e-17  Score=111.23  Aligned_cols=115  Identities=20%  Similarity=0.244  Sum_probs=79.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||++.......   ......++..|++||.+.... ++.++|+||+|++++++++|+.||........ .....
T Consensus       140 ~~kl~d~~~~~~~~~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~  215 (258)
T cd06632         140 VVKLADFGMAKQVVEFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAA-VFKIG  215 (258)
T ss_pred             CEEEccCccceeccccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHH-HHHHH
Confidence            57999999988754322   123456888999999887666 88999999999999999999999865432111 11000


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...   ...               ..+......+.+++.+||..+|..||++.+++.|
T Consensus       216 ~~~---~~~---------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~  255 (258)
T cd06632         216 RSK---ELP---------------PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH  255 (258)
T ss_pred             hcc---cCC---------------CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence            000   000               0011233457889999999999999999999875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.70  E-value=3.1e-17  Score=111.37  Aligned_cols=122  Identities=22%  Similarity=0.345  Sum_probs=74.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-------CCCCCCccchhhhHHHHHHHh-cCCCCccccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-------GRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEE   73 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-------~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~   73 (161)
                      .+||+|||+++...............++..|++||++..       ..++.++||||+|++++++++ |..||.......
T Consensus       138 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~  217 (269)
T cd05042         138 SVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ  217 (269)
T ss_pred             cEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH
Confidence            579999999876432211111223345677999998642       346788999999999999998 777876543221


Q ss_pred             cchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           74 MTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                       .+........ .   ....+..          ....+..+.+++..|| .||++|||+++|+..|
T Consensus       218 -~~~~~~~~~~-~---~~~~~~~----------~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l  267 (269)
T cd05042         218 -VLKQVVREQD-I---KLPKPQL----------DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL  267 (269)
T ss_pred             -HHHHHhhccC-c---cCCCCcc----------cccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence             1111111000 0   0000000          1122344677888888 5999999999998876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.70  E-value=7.2e-17  Score=109.10  Aligned_cols=120  Identities=27%  Similarity=0.309  Sum_probs=79.9

Q ss_pred             ceeeecccccccccCCCCccc--cccccccccccCCCCCCCCC---CCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMT--QTQTLATIGYMAPEYGREGR---VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~--~~~~~g~~~~~~Pe~~~~~~---~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||++...........  .....++..|++||++.+..   ++.++|||++|++++++++|..||..........
T Consensus       137 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~  216 (264)
T cd06626         137 VIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIM  216 (264)
T ss_pred             CEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHH
Confidence            479999999887643222111  12345788999999987665   8899999999999999999999996543221111


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ..... ....                ..+.....+..+.+++.+||+.+|.+|||+.+++.|
T Consensus       217 ~~~~~-~~~~----------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~  261 (264)
T cd06626         217 FHVGA-GHKP----------------PIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQH  261 (264)
T ss_pred             HHHhc-CCCC----------------CCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            10000 0000                000011224457899999999999999999998865

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.69  E-value=2.2e-17  Score=115.85  Aligned_cols=135  Identities=16%  Similarity=0.176  Sum_probs=79.9

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++.+...... .......++..|+|||++.+ ..++.++|+||+|++++++++|+.||........ ....
T Consensus       153 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~-~~~~  231 (342)
T cd07854         153 VLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ-MQLI  231 (342)
T ss_pred             eEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHH
Confidence            4789999999865322111 11122457889999997654 4578899999999999999999999965433111 1100


Q ss_pred             hhhhcCCCCc----cc---cccccc--cchh-hh-hhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           80 VNDWLPISTM----EV---VDVNLL--SQED-IH-FVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        80 ~~~~~~~~~~----~~---~~~~~~--~~~~-~~-~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .... +....    ..   ......  .... .. .........++.+|+.+||..||.+|||+.+++.|
T Consensus       232 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  300 (342)
T cd07854         232 LESV-PVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH  300 (342)
T ss_pred             HHhc-CCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence            0000 00000    00   000000  0000 00 00011234568899999999999999999999976

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.69  E-value=2.3e-17  Score=112.44  Aligned_cols=115  Identities=23%  Similarity=0.359  Sum_probs=80.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .++|+|||++..+....  .......++..|++||.+....++.++|+||+|++++++++|..||.......  ......
T Consensus       139 ~~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~  214 (277)
T cd06641         139 EVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK--VLFLIP  214 (277)
T ss_pred             CEEEeecccceecccch--hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH--HHHHHh
Confidence            47899999987653221  12233567889999999887778899999999999999999999986432211  110000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .....                  ......+..+.+++.+||..+|.+||++.+++.|
T Consensus       215 ~~~~~------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         215 KNNPP------------------TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             cCCCC------------------CCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            00000                  0012234557899999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.69  E-value=2.6e-17  Score=113.05  Aligned_cols=134  Identities=19%  Similarity=0.159  Sum_probs=80.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.......  ......++..|++||.+.+.. ++.++|+||+|++++++++|..||........ +....
T Consensus       144 ~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~-~~~~~  220 (293)
T cd07843         144 ILKICDFGLAREYGSPLK--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQ-LNKIF  220 (293)
T ss_pred             cEEEeecCceeeccCCcc--ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHH
Confidence            479999999987643211  223345788899999886544 68899999999999999999999875433211 11100


Q ss_pred             hhhc-C--CC------Cccccccc--cccchhhhhhhhHH-HHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWL-P--IS------TMEVVDVN--LLSQEDIHFVAKEQ-CVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~-~--~~------~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .... +  ..      ........  ...........+.. .+..+.+++.+||+.+|++|||+.|++.|
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~  290 (293)
T cd07843         221 KLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH  290 (293)
T ss_pred             HHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence            0000 0  00      00000000  00000000000011 24558899999999999999999999876

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.69  E-value=2.4e-17  Score=114.11  Aligned_cols=117  Identities=23%  Similarity=0.339  Sum_probs=79.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC---CCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~---~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||++.....      .....++..|++||++.   ...++.++||||+|++++++++|..||........ ...
T Consensus       153 ~~kl~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~  225 (308)
T cd06634         153 LVKLGDFGSASIMAP------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYH  225 (308)
T ss_pred             cEEECCcccceeecC------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH-HHH
Confidence            478999999876532      12345788999999874   34578899999999999999999999755322111 110


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                      ......+                  .......+..+.+|+.+||..+|++||++.+++.|.....
T Consensus       226 ~~~~~~~------------------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~  272 (308)
T cd06634         226 IAQNESP------------------ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  272 (308)
T ss_pred             HhhcCCC------------------CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence            0000000                  0001223445789999999999999999999998866443

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.69  E-value=1.1e-17  Score=118.13  Aligned_cols=46  Identities=26%  Similarity=0.334  Sum_probs=41.6

Q ss_pred             cccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccc
Q 043981           25 QTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIF   70 (161)
Q Consensus        25 ~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~   70 (161)
                      ..+||+.|+|||++.+..++.++||||+|+++++|++|..||....
T Consensus       195 ~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~  240 (363)
T cd05628         195 STVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET  240 (363)
T ss_pred             cccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCC
Confidence            3579999999999988889999999999999999999999997643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=1.9e-17  Score=114.83  Aligned_cols=94  Identities=23%  Similarity=0.331  Sum_probs=68.1

Q ss_pred             ccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhhhhcCCCCccccccccccchhhhhh
Q 043981           26 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFV  105 (161)
Q Consensus        26 ~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (161)
                      ..|+..|++||++.+..++.++||||+|++++++++|..||........ +......  ..                ..+
T Consensus       192 ~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~-~~~~~~~--~~----------------~~~  252 (316)
T cd05574         192 FVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET-FSNILKK--EV----------------TFP  252 (316)
T ss_pred             CcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH-HHHHhcC--Cc----------------cCC
Confidence            4688899999999888899999999999999999999999865433211 1100000  00                000


Q ss_pred             hhHHHHHHHHHHHHHhcccCcccCCC----HHHHHHH
Q 043981          106 AKEQCVSFVFNLAMACTVESPEQRIN----AKEIVTK  138 (161)
Q Consensus       106 ~~~~~~~~~~~l~~~cl~~dp~~Rps----~~~vl~~  138 (161)
                      .....+..+.+++.+||+.+|+.|||    +++++.|
T Consensus       253 ~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~  289 (316)
T cd05574         253 GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH  289 (316)
T ss_pred             CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence            01113456899999999999999999    8888886

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.69  E-value=2.4e-17  Score=113.23  Aligned_cols=135  Identities=19%  Similarity=0.106  Sum_probs=80.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++......  .......++..|++||++.+. .++.++|+||+|++++++++|..||..............
T Consensus       141 ~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~  218 (294)
T PLN00009        141 ALKLADFGLARAFGIPV--RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFR  218 (294)
T ss_pred             EEEEcccccccccCCCc--cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            47999999997653211  112334678899999987653 478899999999999999999999875433211111000


Q ss_pred             hhhcC-C-CCccc---cccccccch---hhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLP-I-STMEV---VDVNLLSQE---DIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~-~-~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ....+ . .....   .+.......   ..........+..+.+++.+||+.+|++||++.+++.|
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~  284 (294)
T PLN00009        219 ILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH  284 (294)
T ss_pred             HhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            00000 0 00000   000000000   00000011234558899999999999999999999986

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.69  E-value=1.7e-17  Score=122.76  Aligned_cols=133  Identities=16%  Similarity=0.113  Sum_probs=74.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC----------------------CCCCCccchhhhHHHHHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG----------------------RVSANGDVYSFGIMLMET   59 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~----------------------~~~~~~dv~s~g~il~e~   59 (161)
                      .+||+|||+++.+..... .......+++.|++||.+...                      .++.++||||+||+++|+
T Consensus       294 ~~KL~DFGlA~~l~~~~~-~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el  372 (566)
T PLN03225        294 SFKIIDLGAAADLRVGIN-YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQM  372 (566)
T ss_pred             cEEEEeCCCccccccccc-cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHH
Confidence            589999999986543222 223456789999999955321                      234566999999999999


Q ss_pred             HhcCCCCccccccccchhHHhhhhcCCCCcc---ccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHH
Q 043981           60 FTGKKPTDEIFNEEMTLKHWVNDWLPISTME---VVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIV  136 (161)
Q Consensus        60 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl  136 (161)
                      +++..++....   ..+...... .......   ........................++|+.+||++||++|||+.+++
T Consensus       373 ~~~~~~~~~~~---~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L  448 (566)
T PLN03225        373 AFPNLRSDSNL---IQFNRQLKR-NDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAAL  448 (566)
T ss_pred             HhCcCCCchHH---HHHHHHHHh-cCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHh
Confidence            98766543210   000000000 0000000   0000000000000000011123466899999999999999999999


Q ss_pred             HHH
Q 043981          137 TKL  139 (161)
Q Consensus       137 ~~l  139 (161)
                      +|-
T Consensus       449 ~Hp  451 (566)
T PLN03225        449 AHP  451 (566)
T ss_pred             CCc
Confidence            983

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.69  E-value=3.3e-17  Score=114.26  Aligned_cols=137  Identities=18%  Similarity=0.254  Sum_probs=78.2

Q ss_pred             eeeecccccccccCCCCc-----cccccccccccccCCCCCCC--CCCCCCccchhhhHHHHHHHhcCCCCccccccccc
Q 043981            3 AHLSDFSIAKLLTGEDQS-----MTQTQTLATIGYMAPEYGRE--GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMT   75 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~-----~~~~~~~g~~~~~~Pe~~~~--~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~   75 (161)
                      ++++||+.+.........     .......++..|++||++.+  ..++.++||||+|++++++++|..||.........
T Consensus       140 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  219 (327)
T cd08227         140 VYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML  219 (327)
T ss_pred             EEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHH
Confidence            578888765443211110     01122356778999999875  35889999999999999999999999653322111


Q ss_pred             hhHHhhhhcCCCCc-------cc--------ccccc-----------ccchhhhhhhhHHHHHHHHHHHHHhcccCcccC
Q 043981           76 LKHWVNDWLPISTM-------EV--------VDVNL-----------LSQEDIHFVAKEQCVSFVFNLAMACTVESPEQR  129 (161)
Q Consensus        76 ~~~~~~~~~~~~~~-------~~--------~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~R  129 (161)
                      ..... ...+....       +.        .+...           ........+......+.+.+|+.+||++||++|
T Consensus       220 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R  298 (327)
T cd08227         220 LEKLN-GTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDAR  298 (327)
T ss_pred             HHHhc-CCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhc
Confidence            11000 00000000       00        00000           000000000112345678999999999999999


Q ss_pred             CCHHHHHHHHH
Q 043981          130 INAKEIVTKLL  140 (161)
Q Consensus       130 ps~~~vl~~l~  140 (161)
                      ||++++++|-.
T Consensus       299 pt~~ell~~p~  309 (327)
T cd08227         299 PSASTLLNHSF  309 (327)
T ss_pred             CCHHHHhcChh
Confidence            99999998743

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.69  E-value=4.6e-17  Score=112.54  Aligned_cols=137  Identities=15%  Similarity=0.120  Sum_probs=80.1

Q ss_pred             ceeeecccccccccCCCCc---------cccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQS---------MTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFN   71 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~---------~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~   71 (161)
                      .+||+|||+++........         .......++..|++||++.+. .++.++||||+|++++++++|+.||.+...
T Consensus       153 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~  232 (311)
T cd07866         153 ILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSD  232 (311)
T ss_pred             CEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCH
Confidence            4799999999875432111         111234567889999987654 478899999999999999999999865433


Q ss_pred             ccc--chhHHhhhhcCCCCc------cccccccccchh-hhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           72 EEM--TLKHWVNDWLPISTM------EVVDVNLLSQED-IHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        72 ~~~--~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...  .+........+....      ............ ............+.+++.+||..||++|||+.+++.|
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~  308 (311)
T cd07866         233 IDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH  308 (311)
T ss_pred             HHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence            211  011100000000000      000000000000 0000011223568899999999999999999999876

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.69  E-value=3.7e-17  Score=110.43  Aligned_cols=114  Identities=19%  Similarity=0.229  Sum_probs=79.6

Q ss_pred             eeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhhh
Q 043981            3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVND   82 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~~   82 (161)
                      +||+|||+++.......  ......++..|++||...+..++.++|+||+|++++++++|..||.....  .........
T Consensus       144 ~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~--~~~~~~~~~  219 (260)
T cd08222         144 LKIGDFGVSRLLMGSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF--LSVVLRIVE  219 (260)
T ss_pred             EeecccCceeecCCCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH--HHHHHHHHc
Confidence            68999999877643222  12234578889999998777788999999999999999999999854221  111100000


Q ss_pred             hcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           83 WLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ....                  ..+...+..+.+++.+||..+|++||++.++++|
T Consensus       220 ~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  257 (260)
T cd08222         220 GPTP------------------SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN  257 (260)
T ss_pred             CCCC------------------CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence            0000                  0012334568899999999999999999999886

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=8.1e-18  Score=119.43  Aligned_cols=96  Identities=21%  Similarity=0.231  Sum_probs=65.8

Q ss_pred             ccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhhhhcCCCCccccccccccchhhhhh
Q 043981           26 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFV  105 (161)
Q Consensus        26 ~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (161)
                      .+||+.|+|||++.+..++.++||||+||+++++++|..||........ +.. ...+..     ...    .+      
T Consensus       208 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~-~~~-i~~~~~-----~~~----~p------  270 (377)
T cd05629         208 TVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHET-YRK-IINWRE-----TLY----FP------  270 (377)
T ss_pred             cCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHH-HHH-HHccCC-----ccC----CC------
Confidence            4699999999999888899999999999999999999999965433211 110 000000     000    00      


Q ss_pred             hhHHHHHHHHHHHHHhcccCcccC---CCHHHHHHHH
Q 043981          106 AKEQCVSFVFNLAMACTVESPEQR---INAKEIVTKL  139 (161)
Q Consensus       106 ~~~~~~~~~~~l~~~cl~~dp~~R---ps~~~vl~~l  139 (161)
                      .....+.++.+|+.+||. +|.+|   +|+.+++.|-
T Consensus       271 ~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp  306 (377)
T cd05629         271 DDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHP  306 (377)
T ss_pred             CCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCC
Confidence            001123457889999998 77765   5999999985

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.68  E-value=2.7e-17  Score=114.91  Aligned_cols=135  Identities=19%  Similarity=0.169  Sum_probs=81.3

Q ss_pred             ceeeecccccccccCCCCc--cccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQS--MTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~--~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||+++.+......  .......|+..|++||+..+ ..++.++|+||+|++++++++|+.||........ +..
T Consensus       143 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~-~~~  221 (332)
T cd07857         143 ELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQ-LNQ  221 (332)
T ss_pred             CEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHH-HHH
Confidence            4799999999875432211  11233568899999998765 4588999999999999999999999865332110 000


Q ss_pred             HhhhhcCCCCccccc----c-------c--cccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           79 WVNDWLPISTMEVVD----V-------N--LLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~----~-------~--~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ... .......+...    .       .  ......... .....+..+.+++.+||++||.+|||+.+++.|=
T Consensus       222 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~  293 (332)
T cd07857         222 ILQ-VLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFES-IFPNANPLALDLLEKLLAFDPTKRISVEEALEHP  293 (332)
T ss_pred             HHH-HhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHh-hCCCCCHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence            000 00000000000    0       0  000000000 0111245688999999999999999999998774

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.68  E-value=2.8e-17  Score=115.31  Aligned_cols=129  Identities=23%  Similarity=0.266  Sum_probs=79.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.....     .....++..|++||++.+. .++.++||||+|++++++++|+.||....... .+....
T Consensus       156 ~~kL~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~-~~~~i~  229 (343)
T cd07851         156 ELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID-QLKRIM  229 (343)
T ss_pred             CEEEcccccccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHH
Confidence            4799999999865322     2234678889999987543 57889999999999999999999986543211 111100


Q ss_pred             hhhcCCCCccccccc-------------cccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLPISTMEVVDVN-------------LLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      . ..+..........             ......... .....+..+.+++.+||..+|++|||+.+++.|
T Consensus       230 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h  298 (343)
T cd07851         230 N-LVGTPDEELLQKISSESARNYIQSLPQMPKKDFKE-VFSGANPLAIDLLEKMLVLDPDKRITAAEALAH  298 (343)
T ss_pred             H-hcCCCCHHHHhhccchhHHHHHHhccccCCCCHHH-HhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence            0 0000000000000             000000000 001225568899999999999999999999887

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.68  E-value=7.6e-17  Score=109.01  Aligned_cols=118  Identities=24%  Similarity=0.232  Sum_probs=81.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......   ......++..|++||.+.+..++.++|+|++|++++++++|..||.....+.........
T Consensus       131 ~~~l~df~~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  207 (262)
T cd05572         131 YVKLVDFGFAKKLKSGQ---KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDIL  207 (262)
T ss_pred             CEEEeeCCcccccCccc---ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHh
Confidence            47999999998764321   123346788999999988777899999999999999999999999765432211111100


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCC-----HHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRIN-----AKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~vl~~l  139 (161)
                      .. ..              ..  ..+...+..+.+++.+||..+|++||+     ++|+++|=
T Consensus       208 ~~-~~--------------~~--~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~  253 (262)
T cd05572         208 KG-NG--------------KL--EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHK  253 (262)
T ss_pred             cc-CC--------------CC--CCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcCh
Confidence            00 00              00  001112456899999999999999999     78877753

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.68  E-value=8.4e-17  Score=108.72  Aligned_cols=117  Identities=22%  Similarity=0.283  Sum_probs=81.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccc-cccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFN-EEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~-~~~~~~~~~   80 (161)
                      .++|+|||++........  ......++..|++||.+....++.++|+|++|++++++++|..||..... .........
T Consensus       138 ~~~l~df~~~~~~~~~~~--~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~  215 (264)
T cd06623         138 EVKIADFGISKVLENTLD--QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAI  215 (264)
T ss_pred             CEEEccCccceecccCCC--cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHH
Confidence            478999999987643222  12235678899999999888889999999999999999999999866542 111111111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHH-HHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQ-CVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .   .....               ..... .+..+.+++.+||..+|+.|||+.+++.|
T Consensus       216 ~---~~~~~---------------~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         216 C---DGPPP---------------SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             h---cCCCC---------------CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            1   00000               00111 34568899999999999999999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.68  E-value=6.2e-17  Score=113.20  Aligned_cols=140  Identities=16%  Similarity=0.063  Sum_probs=82.4

Q ss_pred             ceeeecccccccccCCCC------------ccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCcc
Q 043981            2 VAHLSDFSIAKLLTGEDQ------------SMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDE   68 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~------------~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~   68 (161)
                      .+||+|||+++.......            ........++..|++||++.+.. ++.++|+||+|++++++++|..||..
T Consensus       157 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~  236 (335)
T PTZ00024        157 ICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPG  236 (335)
T ss_pred             CEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            478999999987541110            11112234678899999886543 78899999999999999999999876


Q ss_pred             ccccccch--hHHhhhhcCCCCccccc-----cccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           69 IFNEEMTL--KHWVNDWLPISTMEVVD-----VNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        69 ~~~~~~~~--~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ........  .................     .................+..+.+++.+||+.+|++|||+++++.|-.-
T Consensus       237 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~  316 (335)
T PTZ00024        237 ENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYF  316 (335)
T ss_pred             CCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCccc
Confidence            54322111  10000000000000000     000000000000011234568899999999999999999999987554

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.68  E-value=6e-18  Score=111.10  Aligned_cols=120  Identities=24%  Similarity=0.243  Sum_probs=83.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC--CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE--GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~--~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||||||++-.+.   .+.-.+.-.|-..|+|||.+..  ..|+.++||||+|+.++|+.+|.+|+.+..+.-..+...
T Consensus       206 ~vKLCDFGIcGqLv---~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~V  282 (361)
T KOG1006|consen  206 DVKLCDFGICGQLV---DSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQV  282 (361)
T ss_pred             CEeeecccchHhHH---HHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHH
Confidence            37999999986652   2223344568889999998753  349999999999999999999999998876633333332


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      +...+|....        ...      .......+..++..||-.|-.+||...+++.+
T Consensus       283 v~gdpp~l~~--------~~~------~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~  327 (361)
T KOG1006|consen  283 VIGDPPILLF--------DKE------CVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF  327 (361)
T ss_pred             HcCCCCeecC--------ccc------ccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence            2222221110        000      01233458889999999999999998887654

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.68  E-value=3.3e-17  Score=109.80  Aligned_cols=133  Identities=20%  Similarity=0.180  Sum_probs=85.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchh----
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLK----   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~----   77 (161)
                      ++||.|||+|+....   ...-+..+.+..|+|||++.+-.|...+||||.||++.||+.|...|.+.+.-++...    
T Consensus       156 ~lKi~dfg~ar~e~~---~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~  232 (369)
T KOG0665|consen  156 TLKILDFGLARTEDT---DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQ  232 (369)
T ss_pred             heeeccchhhcccCc---ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHH
Confidence            479999999987432   2344557889999999999998899999999999999999999998876433211100    


Q ss_pred             -------------HHhhhhcCCCCccc--c-ccccccchhhhhh--hhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           78 -------------HWVNDWLPISTMEV--V-DVNLLSQEDIHFV--AKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        78 -------------~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                                   ..+..+.. ...+.  . ..+......++..  .++-....+.+++.+||..+|++|.|++++|+|
T Consensus       233 lgtpd~~F~~qL~~~~r~yv~-~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H  310 (369)
T KOG0665|consen  233 LGTPDPSFMKQLQPTVRNYVE-NRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH  310 (369)
T ss_pred             hcCCCHHHHHHhhHHHHHHhh-cChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence                         00000000 00000  0 0000000000000  012234457899999999999999999999987

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.68  E-value=9.5e-17  Score=109.63  Aligned_cols=132  Identities=16%  Similarity=0.178  Sum_probs=79.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .++|+|||++........   .....++..|++||++.+ ..++.++|+||||++++++++|+.||.......... ...
T Consensus       137 ~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~-~~~  212 (283)
T cd07830         137 VVKIADFGLAREIRSRPP---YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLY-KIC  212 (283)
T ss_pred             CEEEeecccceeccCCCC---cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHH-HHH
Confidence            579999999986543211   233467889999998754 447899999999999999999999886543211110 000


Q ss_pred             hhhc-CCC--------Cccccccccc--cchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWL-PIS--------TMEVVDVNLL--SQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~-~~~--------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .... +..        ..........  ....... ........+.+++.+||+.+|++|||+++++.|
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~  280 (283)
T cd07830         213 SVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQ-LIPNASPEAIDLIKDMLRWDPKKRPTASQALQH  280 (283)
T ss_pred             HhcCCCChhhhhhHhhhhccccccccccccccHHH-HcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence            0000 000        0000000000  0000000 001114568899999999999999999999876

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.68  E-value=5.7e-18  Score=120.16  Aligned_cols=96  Identities=25%  Similarity=0.309  Sum_probs=66.1

Q ss_pred             ccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhhhhcCCCCccccccccccchhhhhh
Q 043981           26 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFV  105 (161)
Q Consensus        26 ~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (161)
                      .+||+.|+|||++.+..++.++||||+||+++++++|+.||...........  ...+... .              ..+
T Consensus       204 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~--i~~~~~~-~--------------~~~  266 (376)
T cd05598         204 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLK--VINWETT-L--------------HIP  266 (376)
T ss_pred             cCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHH--HhccCcc-c--------------cCC
Confidence            4799999999999888899999999999999999999999976433211110  0000000 0              000


Q ss_pred             hhHHHHHHHHHHHHHhcccCcccCC---CHHHHHHHH
Q 043981          106 AKEQCVSFVFNLAMACTVESPEQRI---NAKEIVTKL  139 (161)
Q Consensus       106 ~~~~~~~~~~~l~~~cl~~dp~~Rp---s~~~vl~~l  139 (161)
                      .....+..+.+++.+|+ .+|.+|+   |+.+++.|-
T Consensus       267 ~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~  302 (376)
T cd05598         267 SQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHP  302 (376)
T ss_pred             CCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCC
Confidence            01122344677888866 5999999   899999883

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.68  E-value=5e-17  Score=109.30  Aligned_cols=115  Identities=23%  Similarity=0.245  Sum_probs=80.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||++.......  .......|+..|++||......++.++|+|++|++++++++|..||......  .+.....
T Consensus       141 ~~~l~d~~~~~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~  216 (258)
T cd08215         141 LVKLGDFGISKVLSSTV--DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL--ELALKIL  216 (258)
T ss_pred             cEEECCccceeecccCc--ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH--HHHHHHh
Confidence            47899999998764322  1223356888999999988888999999999999999999999998553211  1111100


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ......                  .+...+..+.+++.+||..+|++|||+.+++.|
T Consensus       217 ~~~~~~------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         217 KGQYPP------------------IPSQYSSELRNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             cCCCCC------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            000000                  011223458899999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.68  E-value=6.6e-17  Score=110.18  Aligned_cols=109  Identities=24%  Similarity=0.324  Sum_probs=74.5

Q ss_pred             eeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHH-hcCCCCccccccccchhHHh
Q 043981            3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETF-TGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~-~g~~p~~~~~~~~~~~~~~~   80 (161)
                      +|++|||++.....      .....++..|++||.+.+ ..++.++|+||||+++++++ +|..||........  ....
T Consensus       163 ~kl~d~g~~~~~~~------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~--~~~~  234 (274)
T cd05076         163 IKLSDPGVSFTALS------REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEK--ERFY  234 (274)
T ss_pred             eeecCCcccccccc------ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHH--HHHH
Confidence            68999998764321      122356788999998865 45889999999999999985 58888865332211  1100


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ....  .          .        +......+.+++.+||+.+|++|||+.+++++|
T Consensus       235 ~~~~--~----------~--------~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         235 EKKH--R----------L--------PEPSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             Hhcc--C----------C--------CCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence            0000  0          0        001123478899999999999999999999887

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.68  E-value=7.4e-17  Score=110.65  Aligned_cols=135  Identities=18%  Similarity=0.164  Sum_probs=78.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.......  ......++..|++||+..+ ..++.++||||+|++++++++|..||.........+....
T Consensus       141 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~  218 (291)
T cd07844         141 ELKLADFGLARAKSVPSK--TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIF  218 (291)
T ss_pred             CEEECccccccccCCCCc--cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHH
Confidence            479999999876422111  1122346788999998765 4478899999999999999999999865432111111100


Q ss_pred             hhhc---CCCCccc------cccc--cccchhhhhh-hhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWL---PISTMEV------VDVN--LLSQEDIHFV-AKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~---~~~~~~~------~~~~--~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ....   +......      ....  .......... ........+.+++.+||+.+|++|||+.+++.|
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~  288 (291)
T cd07844         219 RVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH  288 (291)
T ss_pred             HhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence            0000   0000000      0000  0000000000 000011457899999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.68  E-value=5e-17  Score=124.32  Aligned_cols=118  Identities=22%  Similarity=0.278  Sum_probs=79.2

Q ss_pred             ceeeeccccccccc-------------C---CCCccccccccccccccCCCCCCCCC---CCCCccchhhhHHHHHHHhc
Q 043981            2 VAHLSDFSIAKLLT-------------G---EDQSMTQTQTLATIGYMAPEYGREGR---VSANGDVYSFGIMLMETFTG   62 (161)
Q Consensus         2 ~~ki~DFG~a~~~~-------------~---~~~~~~~~~~~g~~~~~~Pe~~~~~~---~~~~~dv~s~g~il~e~~~g   62 (161)
                      .|||+|||+|....             +   .......+..+||..|+|||++.+..   |+.++|+||+|++++||+. 
T Consensus       735 ~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y-  813 (1351)
T KOG1035|consen  735 SVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY-  813 (1351)
T ss_pred             CeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc-
Confidence            48999999998721             0   00112445689999999999987654   9999999999999999987 


Q ss_pred             CCCCccccccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        63 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                        ||.+..++...+...-....|..            .++    .....+.-.+++.+|++.||.+||||.++|.+
T Consensus       814 --PF~TsMERa~iL~~LR~g~iP~~------------~~f----~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s  871 (1351)
T KOG1035|consen  814 --PFGTSMERASILTNLRKGSIPEP------------ADF----FDPEHPEEASLIRWLLSHDPSKRPTATELLNS  871 (1351)
T ss_pred             --cCCchHHHHHHHHhcccCCCCCC------------ccc----ccccchHHHHHHHHHhcCCCccCCCHHHHhhc
Confidence              57665554443332221111111            000    11112234678999999999999999998863

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.67  E-value=3.7e-17  Score=110.41  Aligned_cols=114  Identities=21%  Similarity=0.241  Sum_probs=77.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++....      .....++..|++||...+..++.++|+||+|++++++++|..||........ .... .
T Consensus       135 ~~~l~dfg~~~~~~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~-~  206 (260)
T cd05611         135 HLKLTDFGLSRNGLE------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAV-FDNI-L  206 (260)
T ss_pred             cEEEeecccceeccc------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHH-HHHH-H
Confidence            478999999876422      2234578889999998877789999999999999999999999865432211 1100 0


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH---HHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA---KEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~---~~vl~~  138 (161)
                      .. ....              .......++..+.+++.+||+.+|++||++   ++++.|
T Consensus       207 ~~-~~~~--------------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~  251 (260)
T cd05611         207 SR-RINW--------------PEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSH  251 (260)
T ss_pred             hc-ccCC--------------CCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence            00 0000              000011334568899999999999999966   566555

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.67  E-value=9.5e-17  Score=110.92  Aligned_cols=120  Identities=22%  Similarity=0.196  Sum_probs=76.7

Q ss_pred             ceeeecccccccccCCCCc-------------cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcc
Q 043981            2 VAHLSDFSIAKLLTGEDQS-------------MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDE   68 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-------------~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~   68 (161)
                      .+||+|||+++........             .......++..|++||.+....++.++|+||+|++++++++|..||.+
T Consensus       139 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~  218 (305)
T cd05609         139 HIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG  218 (305)
T ss_pred             CEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            4799999998742111000             011123577889999998877899999999999999999999999865


Q ss_pred             ccccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCC---HHHHHHHH
Q 043981           69 IFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRIN---AKEIVTKL  139 (161)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps---~~~vl~~l  139 (161)
                      ...... +.........       .+   ..       ....+..+.+++.+||+.+|++||+   +.+++.|-
T Consensus       219 ~~~~~~-~~~~~~~~~~-------~~---~~-------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~  274 (305)
T cd05609         219 DTPEEL-FGQVISDDIE-------WP---EG-------DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHR  274 (305)
T ss_pred             CCHHHH-HHHHHhcccC-------CC---Cc-------cccCCHHHHHHHHHHhccChhhccCccCHHHHHhCc
Confidence            322211 1100000000       00   00       0123445789999999999999998   46666653

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.67  E-value=6.3e-17  Score=112.24  Aligned_cols=112  Identities=21%  Similarity=0.265  Sum_probs=76.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC---CCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~---~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||++....      ......|+..|++||++.   ...++.++|+||+|++++++++|..||........... 
T Consensus       159 ~~kL~dfg~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~-  231 (313)
T cd06633         159 QVKLADFGSASKSS------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH-  231 (313)
T ss_pred             CEEEeecCCCcccC------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH-
Confidence            47999999886432      122356888999999874   34588899999999999999999999865432111110 


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ......+    ..              .....+..+.+|+.+||+++|.+||++.+++.|
T Consensus       232 ~~~~~~~----~~--------------~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         232 IAQNDSP----TL--------------QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             HHhcCCC----CC--------------CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            0000000    00              011122347889999999999999999999987

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.67  E-value=2e-16  Score=110.43  Aligned_cols=140  Identities=22%  Similarity=0.336  Sum_probs=80.4

Q ss_pred             ceeeecccccccccCCCCcc-----ccccccccccccCCCCCCCC--CCCCCccchhhhHHHHHHHhcCCCCcccccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSM-----TQTQTLATIGYMAPEYGREG--RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM   74 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~-----~~~~~~g~~~~~~Pe~~~~~--~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~   74 (161)
                      .+|++||+.+..........     ......++..|++||++.+.  .++.++|+||+|++++++++|+.||........
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~  218 (328)
T cd08226         139 LVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM  218 (328)
T ss_pred             cEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH
Confidence            36788887654332111100     01112345679999998763  478899999999999999999999976543222


Q ss_pred             chhHHhhhhc-CCC-------C--------------cc-ccccc---cccchhhhhhhhHHHHHHHHHHHHHhcccCccc
Q 043981           75 TLKHWVNDWL-PIS-------T--------------ME-VVDVN---LLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQ  128 (161)
Q Consensus        75 ~~~~~~~~~~-~~~-------~--------------~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~  128 (161)
                      .......... +..       .              .+ .....   ...............+..+.+|+.+||.+||++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~  298 (328)
T cd08226         219 LLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEK  298 (328)
T ss_pred             HHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCccc
Confidence            1111100000 000       0              00 00000   000001111122345677899999999999999


Q ss_pred             CCCHHHHHHHHHH
Q 043981          129 RINAKEIVTKLLK  141 (161)
Q Consensus       129 Rps~~~vl~~l~~  141 (161)
                      |||+.++++|-.-
T Consensus       299 Rpta~e~l~~~~~  311 (328)
T cd08226         299 RPSASSLLSHAFF  311 (328)
T ss_pred             CCCHHHHhhCHHH
Confidence            9999999987654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.67  E-value=7.9e-17  Score=111.03  Aligned_cols=136  Identities=21%  Similarity=0.200  Sum_probs=79.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCcccccccc--chhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM--TLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~--~~~~   78 (161)
                      .+||+|||++..+..... .......++..|++||.+.+. .++.++||||+|++++++++|+.||........  .+..
T Consensus       154 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~  232 (302)
T cd07864         154 QIKLADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISR  232 (302)
T ss_pred             cEEeCcccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence            579999999987643221 111223567789999987643 478899999999999999999999865322111  0111


Q ss_pred             HhhhhcCCCCcccccccccc-----c--hhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           79 WVNDWLPISTMEVVDVNLLS-----Q--EDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ......+.............     .  ...........+..+.+++.+||..+|.+|||+.+++.|
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  299 (302)
T cd07864         233 LCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS  299 (302)
T ss_pred             HhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            11000010000000000000     0  000000011234568999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.67  E-value=1.3e-16  Score=103.16  Aligned_cols=115  Identities=17%  Similarity=0.219  Sum_probs=87.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||-+..-    ....++..+||.-|.+||++.+..++...|+|++|++.+|++.|..||...... ..+.....
T Consensus       162 ~lkiAdfGwsV~~----p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~-etYkrI~k  236 (281)
T KOG0580|consen  162 ELKIADFGWSVHA----PSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS-ETYKRIRK  236 (281)
T ss_pred             CeeccCCCceeec----CCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH-HHHHHHHH
Confidence            4699999998653    244567789999999999999999999999999999999999999999764421 11111000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                             .+..             .+...+....+++.+|+..+|.+|.+..|++.|-+-
T Consensus       237 -------~~~~-------------~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI  276 (281)
T KOG0580|consen  237 -------VDLK-------------FPSTISGGAADLISRLLVKNPIERLALTEVMDHPWI  276 (281)
T ss_pred             -------cccc-------------CCcccChhHHHHHHHHhccCccccccHHHHhhhHHH
Confidence                   0000             013334558899999999999999999999998764

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.67  E-value=9.7e-17  Score=109.40  Aligned_cols=118  Identities=22%  Similarity=0.236  Sum_probs=79.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....   .......++..|++||++.+..++.++|+||+|++++++++|+.||.......... ....
T Consensus       133 ~~~l~dfg~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~  208 (277)
T cd05577         133 NVRISDLGLAVELKGG---KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKE-ELKR  208 (277)
T ss_pred             CEEEccCcchhhhccC---CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHH-HHHh
Confidence            4799999998765321   11233457788999999888778999999999999999999999986543311100 0000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~l  139 (161)
                      ....    .            ....+...+..+.+++.+||+.+|.+||     ++.+++.|-
T Consensus       209 ~~~~----~------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~  255 (277)
T cd05577         209 RTLE----M------------AVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHP  255 (277)
T ss_pred             cccc----c------------cccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhCh
Confidence            0000    0            0000112245588999999999999999     777787764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.67  E-value=9.6e-17  Score=110.33  Aligned_cols=117  Identities=23%  Similarity=0.271  Sum_probs=79.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .++|+|||++........  ......++..|++||+..+..++.++|+||+|++++++++|..||.......  ......
T Consensus       154 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~--~~~~~~  229 (292)
T cd06657         154 RVKLSDFGFCAQVSKEVP--RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AMKMIR  229 (292)
T ss_pred             CEEEcccccceecccccc--cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHH
Confidence            478999999876532211  1233568889999999887778999999999999999999999986432211  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...+.....                ....+..+.+++.+||..+|.+||++.+++.|
T Consensus       230 ~~~~~~~~~----------------~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~  270 (292)
T cd06657         230 DNLPPKLKN----------------LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH  270 (292)
T ss_pred             hhCCcccCC----------------cccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence            101100000                01223347789999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.67  E-value=4.3e-17  Score=120.93  Aligned_cols=127  Identities=26%  Similarity=0.396  Sum_probs=97.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccc-cchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEE-MTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~-~~~~~~   79 (161)
                      ++||.|||+++.+.............-.+-|++-|.++...|+.++|||+||+..||++| |..|+++...++ ..+.  
T Consensus       836 hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dll--  913 (1177)
T KOG1025|consen  836 HVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLL--  913 (1177)
T ss_pred             eEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHH--
Confidence            589999999999876655545555556778999999998899999999999999999999 889987643321 1111  


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhh
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRN  149 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~  149 (161)
                                         +.+.+...++.+.-.+.-+|.+||..|+..||+++++...+.++.+...+.
T Consensus       914 -------------------e~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpqry  964 (1177)
T KOG1025|consen  914 -------------------EKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQRY  964 (1177)
T ss_pred             -------------------hccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcceE
Confidence                               111123335666677888999999999999999999999988887755443

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.67  E-value=1.6e-16  Score=108.53  Aligned_cols=134  Identities=19%  Similarity=0.160  Sum_probs=80.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.......  ......++..|++||++.+. .++.++|+|++|++++++++|+.||........ +....
T Consensus       138 ~~~l~d~g~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~  214 (284)
T cd07836         138 ELKLADFGLARAFGIPVN--TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQ-LLKIF  214 (284)
T ss_pred             cEEEeecchhhhhcCCcc--ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHH
Confidence            478999999976532211  12334578889999987654 478899999999999999999999876543221 11100


Q ss_pred             hhhc-CC--CCc-----cccccccc-cchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWL-PI--STM-----EVVDVNLL-SQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~-~~--~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .... +.  ...     ........ .............+..+.+++.+||+.||.+||++.+++.|
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  281 (284)
T cd07836         215 RIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH  281 (284)
T ss_pred             HHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            0000 00  000     00000000 00000000112335668899999999999999999999865

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.66  E-value=1.1e-16  Score=110.16  Aligned_cols=133  Identities=17%  Similarity=0.186  Sum_probs=79.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.......  ......++..|++||.+.+ ..++.++|+||+|++++++++|..+|....... .+....
T Consensus       140 ~~~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~-~~~~~~  216 (298)
T cd07841         140 VLKLADFGLARSFGSPNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID-QLGKIF  216 (298)
T ss_pred             CEEEccceeeeeccCCCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH-HHHHHH
Confidence            479999999987643211  1223456778999998754 347889999999999999999977775433211 111111


Q ss_pred             hhhc-C--CC------CccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWL-P--IS------TMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~-~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .... +  ..      ............... .......+..+.+++.+||..+|++|||+++++.|
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         217 EALGTPTEENWPGVTSLPDYVEFKPFPPTPL-KQIFPAASDDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             HHcCCCchhhhhhcccccccccccccCCcch-hhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            0000 0  00      000000000000000 00112335678899999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.66  E-value=1e-16  Score=109.12  Aligned_cols=119  Identities=26%  Similarity=0.402  Sum_probs=79.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++..... .........++..|++||.+.+..++.++||||+|++++++++ |..||.......  +....
T Consensus       155 ~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~--~~~~~  231 (275)
T cd05046         155 EVKVSLLSLSKDVYNS-EYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE--VLNRL  231 (275)
T ss_pred             cEEEcccccccccCcc-cccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH--HHHHH
Confidence            4789999998754221 1112233456778999999887788899999999999999998 777875432211  11100


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ..   .... .             ......+..+.+++.+||..+|.+|||+.+++..|.
T Consensus       232 ~~---~~~~-~-------------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         232 QA---GKLE-L-------------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             Hc---CCcC-C-------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            00   0000 0             001122345889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.66  E-value=1.3e-16  Score=111.38  Aligned_cols=130  Identities=22%  Similarity=0.250  Sum_probs=79.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccc--hhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMT--LKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~--~~~   78 (161)
                      .+||+|||.++.....     .....++..|++||++.+ ..++.++|+||+|++++++++|+.||.........  +..
T Consensus       146 ~~~l~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~  220 (328)
T cd07856         146 DLKICDFGLARIQDPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITD  220 (328)
T ss_pred             CEEeCccccccccCCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            4799999998764321     123457788999998765 45889999999999999999999998654321110  000


Q ss_pred             HhhhhcCC---------CCccccccccccchhhhhh-hhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           79 WVNDWLPI---------STMEVVDVNLLSQEDIHFV-AKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        79 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      . ....+.         ....... ........+.. .....+..+.+++.+||+.+|++|||+.+++.|
T Consensus       221 ~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         221 L-LGTPPDDVINTICSENTLRFVQ-SLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             H-hCCCCHHHHHhccchhhHHHHh-hccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            0 000000         0000000 00000000000 001234568899999999999999999999888

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.66  E-value=1.7e-16  Score=107.04  Aligned_cols=116  Identities=22%  Similarity=0.272  Sum_probs=79.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .++|+|||++.......   ......|+..|++||++....++.++|+||+|++++++++|..||...........   .
T Consensus       138 ~~~l~d~~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~---~  211 (258)
T cd05578         138 HVHITDFNIATKVTPDT---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQI---R  211 (258)
T ss_pred             CEEEeecccccccCCCc---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHH---H
Confidence            47899999988754321   12335678889999998877789999999999999999999999876543211110   0


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH--HHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA--KEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~--~~vl~~  138 (161)
                      ..... . .             ...+...+..+.+++.+||..||.+||++  +|++.|
T Consensus       212 ~~~~~-~-~-------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~  255 (258)
T cd05578         212 AKQET-A-D-------------VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNH  255 (258)
T ss_pred             HHhcc-c-c-------------ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcC
Confidence            00000 0 0             00011223568899999999999999999  776653

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.65  E-value=4.4e-16  Score=106.21  Aligned_cols=133  Identities=23%  Similarity=0.210  Sum_probs=79.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.......  ......++..|++||.+... .++.++|+|++|++++++++|..||........ +....
T Consensus       136 ~~~l~d~g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~-~~~~~  212 (282)
T cd07829         136 VLKLADFGLARAFGIPLR--TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ-LFKIF  212 (282)
T ss_pred             CEEEecCCcccccCCCcc--ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHH
Confidence            479999999987543221  12234567789999988766 688899999999999999999988865332111 10000


Q ss_pred             hhhc-C--CCC---ccc--cc--cccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWL-P--IST---MEV--VD--VNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~-~--~~~---~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .... +  ...   ...  ..  ........... ..+..+..+.+++.+||..+|++||++.+++.|
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~  279 (282)
T cd07829         213 QILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEK-VLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH  279 (282)
T ss_pred             HHhCCCcHHHHHhhcccccccccccccCccchHH-hcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence            0000 0  000   000  00  00000000000 011224568999999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=1.5e-16  Score=106.84  Aligned_cols=115  Identities=23%  Similarity=0.337  Sum_probs=80.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||.++.......  ......++..|++||...+..++.++|+|++|++++++++|..||........... .. 
T Consensus       137 ~~~l~d~~~~~~~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~-~~-  212 (254)
T cd06627         137 VVKLADFGVATKLNDVSK--DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFR-IV-  212 (254)
T ss_pred             CEEEeccccceecCCCcc--cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHH-Hh-
Confidence            479999999987643222  12335678899999998777788999999999999999999999865432111110 00 


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                        ... . .              ..+...+..+.+++.+||..+|++|||+.+++.+
T Consensus       213 --~~~-~-~--------------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  251 (254)
T cd06627         213 --QDD-H-P--------------PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKH  251 (254)
T ss_pred             --ccC-C-C--------------CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence              000 0 0              0011223458899999999999999999999864

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.65  E-value=1.8e-17  Score=116.96  Aligned_cols=95  Identities=23%  Similarity=0.306  Sum_probs=64.0

Q ss_pred             ccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhhhhcCCCCccccccccccchhhhhh
Q 043981           26 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFV  105 (161)
Q Consensus        26 ~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (161)
                      .+||+.|+|||++.+..++.++|+||+||+++++++|..||......... . ....+..     ...          .+
T Consensus       196 ~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~-~-~i~~~~~-----~~~----------~p  258 (360)
T cd05627         196 TVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETY-R-KVMNWKE-----TLV----------FP  258 (360)
T ss_pred             cCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHHH-H-HHHcCCC-----cee----------cC
Confidence            57999999999998888999999999999999999999999764332110 0 0000000     000          00


Q ss_pred             hhHHHHHHHHHHHHHhcccCcccCCC---HHHHHHH
Q 043981          106 AKEQCVSFVFNLAMACTVESPEQRIN---AKEIVTK  138 (161)
Q Consensus       106 ~~~~~~~~~~~l~~~cl~~dp~~Rps---~~~vl~~  138 (161)
                      .....+..+.+++.+++ .||..|++   +.+++.|
T Consensus       259 ~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h  293 (360)
T cd05627         259 PEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSH  293 (360)
T ss_pred             CCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence            00112334777888876 49999985   6788887

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.65  E-value=6.4e-17  Score=113.07  Aligned_cols=120  Identities=14%  Similarity=0.191  Sum_probs=76.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC-----CCCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR-----EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~-----~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||++........ .......||+.|++||++.     ...++.++||||+|++++++++|+.||........ +
T Consensus       140 ~~kL~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~-~  217 (332)
T cd05623         140 HIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET-Y  217 (332)
T ss_pred             CEEEeecchheecccCCc-ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHH-H
Confidence            579999999876532221 1223357999999999885     23578899999999999999999999965322111 1


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCccc--CCCHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQ--RINAKEIVTK  138 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~--Rps~~~vl~~  138 (161)
                      .    ...... .. .  ....       .....+..+.+|+.+|+..++.+  |+++.++++|
T Consensus       218 ~----~i~~~~-~~-~--~~p~-------~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         218 G----KIMNHK-ER-F--QFPA-------QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             H----HHhCCC-cc-c--cCCC-------ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence            1    000000 00 0  0000       01123455788999988765554  6899999998

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.65  E-value=2.3e-16  Score=108.22  Aligned_cols=112  Identities=17%  Similarity=0.172  Sum_probs=79.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....     .....+++.|++||.+.+..++.++|+||+|++++++++|+.||.......  ......
T Consensus       139 ~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~  211 (290)
T cd05580         139 YIKITDFGFAKRVKGR-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQ--IYEKIL  211 (290)
T ss_pred             CEEEeeCCCccccCCC-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHh
Confidence            4799999999876432     233468889999999887788899999999999999999999986543211  110000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~l  139 (161)
                      ...   .      ..          +...+..+.+++.+||..+|.+|+     ++++++.|-
T Consensus       212 ~~~---~------~~----------~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~  255 (290)
T cd05580         212 EGK---V------RF----------PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHP  255 (290)
T ss_pred             cCC---c------cC----------CccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCc
Confidence            000   0      00          111234578999999999999999     788888764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.65  E-value=1.5e-16  Score=112.76  Aligned_cols=119  Identities=19%  Similarity=0.211  Sum_probs=86.8

Q ss_pred             eeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhhh
Q 043981            3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVND   82 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~~   82 (161)
                      +||.|||+|+.+..+.+   ..+++||+.|.|||++....++.++|.|++|++++|+++|.+||.+.++..  .......
T Consensus       559 ~KLVDFGFAKki~~g~K---TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmk--tYn~ILk  633 (732)
T KOG0614|consen  559 LKLVDFGFAKKIGSGRK---TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMK--TYNLILK  633 (732)
T ss_pred             eEEeehhhHHHhccCCc---eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHH--HHHHHHh
Confidence            69999999999865444   456899999999999999999999999999999999999999998754421  1111110


Q ss_pred             hcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCC-----HHHHHHHHHHhH
Q 043981           83 WLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRIN-----AKEIVTKLLKIR  143 (161)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~vl~~l~~~~  143 (161)
                      .    .    +       ..  ..+........+|+.+....+|..|.-     +.|+.+|-+-..
T Consensus       634 G----i----d-------~i--~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~g  682 (732)
T KOG0614|consen  634 G----I----D-------KI--EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEG  682 (732)
T ss_pred             h----h----h-------hh--hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhc
Confidence            0    0    0       00  012233444678888888999999875     788888876543

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.64  E-value=4.7e-17  Score=114.00  Aligned_cols=122  Identities=20%  Similarity=0.373  Sum_probs=84.8

Q ss_pred             ceeeecccccccccCCCCc-----cccccccccccccCCCCCCCC----CCCCCccchhhhHHHHHHHhcCCCCcccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQS-----MTQTQTLATIGYMAPEYGREG----RVSANGDVYSFGIMLMETFTGKKPTDEIFNE   72 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-----~~~~~~~g~~~~~~Pe~~~~~----~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~   72 (161)
                      .+||+|||+++++..+...     ...+...||.||++||-+...    ..+.+.||||.|+|||..++|+.||...-..
T Consensus       611 eIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ  690 (775)
T KOG1151|consen  611 EIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ  690 (775)
T ss_pred             eeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH
Confidence            4799999999998643322     233457899999999965432    2789999999999999999999999765444


Q ss_pred             ccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           73 EMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...+...       .+.+        .....++..+....+..+||.+||++.-++|....++..+
T Consensus       691 QdILqeN-------TIlk--------AtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d  741 (775)
T KOG1151|consen  691 QDILQEN-------TILK--------ATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD  741 (775)
T ss_pred             HHHHhhh-------chhc--------ceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence            3333211       0001        1111222234555678899999999999999998776554

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.64  E-value=1.1e-16  Score=111.96  Aligned_cols=110  Identities=24%  Similarity=0.340  Sum_probs=77.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      +++|+|+|+|..+..+..   ....+||.+|||||++....|+...|.|++||++|||+.|+.||....+....      
T Consensus       325 hvRISDLGLAvei~~g~~---~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~------  395 (591)
T KOG0986|consen  325 HVRISDLGLAVEIPEGKP---IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKR------  395 (591)
T ss_pred             CeEeeccceEEecCCCCc---cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhH------
Confidence            589999999998854333   33458999999999999888999999999999999999999999653332110      


Q ss_pred             hhcCCCCccccccccc-cchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH
Q 043981           82 DWLPISTMEVVDVNLL-SQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA  132 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~  132 (161)
                              +.++.... ....+    +..-+++.++|....|..||.+|.-+
T Consensus       396 --------eEvdrr~~~~~~ey----~~kFS~eakslc~~LL~Kdp~~RLGc  435 (591)
T KOG0986|consen  396 --------EEVDRRTLEDPEEY----SDKFSEEAKSLCEGLLTKDPEKRLGC  435 (591)
T ss_pred             --------HHHHHHHhcchhhc----ccccCHHHHHHHHHHHccCHHHhccC
Confidence                    00000000 00000    12334567889999999999999754

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.64  E-value=1.6e-16  Score=107.26  Aligned_cols=117  Identities=24%  Similarity=0.272  Sum_probs=77.8

Q ss_pred             ceeeecccccccccCCCC------ccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQ------SMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMT   75 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~------~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~   75 (161)
                      .+||+|||++........      ........++..|++||+.....++.++|+||+|++++++++|..||.....+.. 
T Consensus       131 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~-  209 (265)
T cd05579         131 HLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEI-  209 (265)
T ss_pred             CEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-
Confidence            478999999876432211      1122335678889999998877788999999999999999999999865432211 


Q ss_pred             hhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH---HHHHH
Q 043981           76 LKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA---KEIVT  137 (161)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~---~~vl~  137 (161)
                       ......   ...              ..+.....+..+.+++.+||+.+|++|||+   .+++.
T Consensus       210 -~~~~~~---~~~--------------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         210 -FQNILN---GKI--------------EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             -HHHHhc---CCc--------------CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence             100000   000              000000124558899999999999999999   55554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.64  E-value=1.3e-16  Score=112.01  Aligned_cols=131  Identities=18%  Similarity=0.188  Sum_probs=80.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++....     ......++..|++||+..+ ..++.++|+||+|++++++++|+.||........ +....
T Consensus       158 ~~kl~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-~~~~~  231 (345)
T cd07877         158 ELKILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ-LKLIL  231 (345)
T ss_pred             CEEEecccccccccc-----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH
Confidence            479999999876421     1223467889999998765 4578899999999999999999999865332111 11100


Q ss_pred             hhhcCCCCccccccc-------------cccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVN-------------LLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      . .............             ........ ......+..+.+|+.+||+.||.+|||+.+++.|-.
T Consensus       232 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~  302 (345)
T cd07877         232 R-LVGTPGAELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY  302 (345)
T ss_pred             H-HhCCCCHHHHhhcccHhHHHHHHHhcccCCcchh-hhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChh
Confidence            0 0000000000000             00000000 000012456889999999999999999999998854

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=3.9e-16  Score=105.73  Aligned_cols=117  Identities=17%  Similarity=0.144  Sum_probs=79.2

Q ss_pred             ceeeecccccccccCCCC-ccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQ-SMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~-~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .++|+|||+++....... ........++..|++||++.+..++.++|+||+|++++++++|+.||....... ......
T Consensus       144 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~  222 (264)
T cd06653         144 NVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA-AIFKIA  222 (264)
T ss_pred             CEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH-HHHHHH
Confidence            478999999987532111 111223568889999999988788999999999999999999999986532211 111100


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .  .+..                ...+......+.+++.+||. +|..|||+.+++.|
T Consensus       223 ~--~~~~----------------~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~  261 (264)
T cd06653         223 T--QPTK----------------PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH  261 (264)
T ss_pred             c--CCCC----------------CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence            0  0000                00012334558899999999 47999999998876

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.64  E-value=3.7e-16  Score=108.65  Aligned_cols=108  Identities=19%  Similarity=0.273  Sum_probs=77.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      ++||+|||+++.-..  .......++||+-|+|||++..++|..++|.|++|+++|||+.|+.||++.++++.-..  ..
T Consensus       488 HiKi~DFGmcKEni~--~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~a--I~  563 (683)
T KOG0696|consen  488 HIKIADFGMCKENIF--DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQA--IM  563 (683)
T ss_pred             ceEeeeccccccccc--CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH--HH
Confidence            689999999986322  22234568999999999999999999999999999999999999999988655432111  00


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA  132 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~  132 (161)
                      ..      +..             .+...+.+..++....|...|.+|.-+
T Consensus       564 eh------nvs-------------yPKslSkEAv~ickg~ltK~P~kRLGc  595 (683)
T KOG0696|consen  564 EH------NVS-------------YPKSLSKEAVAICKGLLTKHPGKRLGC  595 (683)
T ss_pred             Hc------cCc-------------CcccccHHHHHHHHHHhhcCCccccCC
Confidence            00      000             012233446677777888889888743

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.64  E-value=4.2e-16  Score=106.14  Aligned_cols=116  Identities=19%  Similarity=0.284  Sum_probs=80.1

Q ss_pred             ceeeecccccccccCCCCc------------------cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcC
Q 043981            2 VAHLSDFSIAKLLTGEDQS------------------MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGK   63 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~------------------~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~   63 (161)
                      .++|+|||++.........                  .......++..|++||+.....++.++|+|++|++++++++|.
T Consensus       140 ~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~  219 (280)
T cd05581         140 HIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGK  219 (280)
T ss_pred             CEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCC
Confidence            4789999998876432210                  1223346788999999988777899999999999999999999


Q ss_pred             CCCccccccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH----HHHHHH
Q 043981           64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA----KEIVTK  138 (161)
Q Consensus        64 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~----~~vl~~  138 (161)
                      .||...... ..+... .   ...      .          ..+...+..+.+++.+||+.+|.+|||+    ++++.|
T Consensus       220 ~p~~~~~~~-~~~~~~-~---~~~------~----------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~  277 (280)
T cd05581         220 PPFRGSNEY-LTFQKI-L---KLE------Y----------SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH  277 (280)
T ss_pred             CCCCCccHH-HHHHHH-H---hcC------C----------CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence            998754321 111100 0   000      0          0011224458899999999999999999    888776

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.63  E-value=2.8e-16  Score=107.65  Aligned_cols=120  Identities=21%  Similarity=0.227  Sum_probs=77.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC--CCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR--VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~--~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .++|+|||+++.+...... ......|+..|++||...+..  .+.++|+||+|++++++++|..||....... .....
T Consensus       143 ~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-~~~~~  220 (288)
T cd05583         143 HVVLTDFGLSKEFLAEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN-SQSEI  220 (288)
T ss_pred             CEEEEECcccccccccccc-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc-hHHHH
Confidence            4789999998875432221 122345788999999886654  7889999999999999999999985422111 01111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ........                ...+...+..+.+++.+||+.+|++|||+.++...|
T Consensus       221 ~~~~~~~~----------------~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l  264 (288)
T cd05583         221 SRRILKSK----------------PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIK  264 (288)
T ss_pred             HHHHHccC----------------CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHh
Confidence            11000000                000112234578899999999999999976664433

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.63  E-value=2.5e-16  Score=110.54  Aligned_cols=129  Identities=22%  Similarity=0.214  Sum_probs=79.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.....     .....++..|++||++.+ ..++.++|+||+|++++++++|..||........ +....
T Consensus       156 ~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~-~~~~~  229 (343)
T cd07880         156 ELKILDFGLARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ-LMEIM  229 (343)
T ss_pred             CEEEeecccccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH
Confidence            4799999999765321     223457889999998865 3478889999999999999999999875432111 11100


Q ss_pred             hhhcCCCCcccc---ccc----------cccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLPISTMEVV---DVN----------LLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~~~~~~~~---~~~----------~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      . ..........   ...          ....... .......+..+.+++.+||+.||.+|||+.+++.|
T Consensus       230 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~  298 (343)
T cd07880         230 K-VTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDF-RSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH  298 (343)
T ss_pred             H-hcCCCCHHHHHhhcchhHHHHHHhccccCcchH-HHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            0 0000000000   000          0000000 00012334568899999999999999999999965

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.63  E-value=3.3e-16  Score=108.18  Aligned_cols=98  Identities=27%  Similarity=0.344  Sum_probs=74.2

Q ss_pred             ccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhhhhcCCCCccccccccccchh
Q 043981           22 TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQED  101 (161)
Q Consensus        22 ~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (161)
                      +...++||..|.|||++.+..+..++|.|+||+++|||++|..||.+...+.-... .+.            .      .
T Consensus       291 RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~N-Iv~------------~------~  351 (459)
T KOG0610|consen  291 RSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRN-IVG------------Q------P  351 (459)
T ss_pred             cccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHH-Hhc------------C------C
Confidence            44568999999999999999999999999999999999999999987655432111 110            0      0


Q ss_pred             hhhhhhHHHHHHHHHHHHHhcccCcccCCC----HHHHHHH
Q 043981          102 IHFVAKEQCVSFVFNLAMACTVESPEQRIN----AKEIVTK  138 (161)
Q Consensus       102 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps----~~~vl~~  138 (161)
                      ...+..+..+..+++||.+.|..||.+|.-    |.||.+|
T Consensus       352 l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~H  392 (459)
T KOG0610|consen  352 LKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRH  392 (459)
T ss_pred             CcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcC
Confidence            111112244556899999999999999997    7777765

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.63  E-value=3.6e-16  Score=109.24  Aligned_cols=121  Identities=17%  Similarity=0.196  Sum_probs=75.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-----CCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-----GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-----~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||+++.+..... .......||+.|+|||++..     ..++.++||||+|++++++++|+.||........ +
T Consensus       140 ~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~-~  217 (331)
T cd05597         140 HIRLADFGSCLRLLADGT-VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-Y  217 (331)
T ss_pred             CEEEEECCceeecCCCCC-ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHH-H
Confidence            479999999876543222 11223468999999998863     3478899999999999999999999865322111 0


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcc--cCCCHHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPE--QRINAKEIVTKL  139 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~--~Rps~~~vl~~l  139 (161)
                      .    .....  .....  . ..      .....+..+.+++.+||..++.  .|+++++++.|-
T Consensus       218 ~----~i~~~--~~~~~--~-~~------~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp  267 (331)
T cd05597         218 G----KIMNH--KEHFQ--F-PP------DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHP  267 (331)
T ss_pred             H----HHHcC--CCccc--C-CC------ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCC
Confidence            0    00000  00000  0 00      0011334577888888765444  378999999994

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.62  E-value=1e-15  Score=106.70  Aligned_cols=135  Identities=21%  Similarity=0.314  Sum_probs=88.1

Q ss_pred             ceeeecccccccccCCCC--ccccccccccccccCCCCCCCCC----C--CCCccchhhhHHHHHHHhcC----------
Q 043981            2 VAHLSDFSIAKLLTGEDQ--SMTQTQTLATIGYMAPEYGREGR----V--SANGDVYSFGIMLMETFTGK----------   63 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~--~~~~~~~~g~~~~~~Pe~~~~~~----~--~~~~dv~s~g~il~e~~~g~----------   63 (161)
                      ++.|+|+|+|........  ....+..+||..|||||++...-    +  -..+||||||+++||++.+.          
T Consensus       354 ~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~  433 (513)
T KOG2052|consen  354 TCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQ  433 (513)
T ss_pred             cEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhc
Confidence            356999999987643212  23445678999999999985321    1  23489999999999988632          


Q ss_pred             CCCccccccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        64 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                      .||.+..+.+..+.+         +.+++..+...+..........+...+.++|..||..+|..|.|+-.+.+.|.++.
T Consensus       434 ~Pyyd~Vp~DPs~ee---------MrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~  504 (513)
T KOG2052|consen  434 LPYYDVVPSDPSFEE---------MRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS  504 (513)
T ss_pred             CCcccCCCCCCCHHH---------HhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence            356555444433322         11122211111111111223455567889999999999999999999999999888


Q ss_pred             HH
Q 043981          144 DS  145 (161)
Q Consensus       144 ~~  145 (161)
                      +.
T Consensus       505 ~~  506 (513)
T KOG2052|consen  505 NS  506 (513)
T ss_pred             cC
Confidence            63

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.62  E-value=9.2e-16  Score=102.10  Aligned_cols=117  Identities=26%  Similarity=0.256  Sum_probs=80.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .++|+|||.+.......   ......++..|++||......++.++|+|++|++++++++|..||........ ......
T Consensus       125 ~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~-~~~~~~  200 (244)
T smart00220      125 HVKLADFGLARQLDPGG---LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLE-LFKKIG  200 (244)
T ss_pred             cEEEccccceeeecccc---ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHh
Confidence            47899999998764321   22345678899999998877788999999999999999999999865322111 111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ......    .      ..      ....+..+.+++.+||..+|++||++.+++.+
T Consensus       201 ~~~~~~----~------~~------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~  241 (244)
T smart00220      201 KPKPPF----P------PP------EWKISPEAKDLIRKLLVKDPEKRLTAEEALQH  241 (244)
T ss_pred             ccCCCC----c------cc------cccCCHHHHHHHHHHccCCchhccCHHHHhhC
Confidence            000000    0      00      00033458899999999999999999999874

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.62  E-value=9.4e-17  Score=106.24  Aligned_cols=137  Identities=16%  Similarity=0.142  Sum_probs=84.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCcccccccc-chhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEM-TLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~-~~~~~   79 (161)
                      ++||||||++|..... +..+-+..+-|.+|++||++-+.. |+...||||.|||+.|++.++..|+...+-++ .++..
T Consensus       194 vLKICDFGLARvee~d-~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItd  272 (449)
T KOG0664|consen  194 ILKICDFGLARTWDQR-DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIID  272 (449)
T ss_pred             eEEecccccccccchh-hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHH
Confidence            5799999999875322 222334456788999999988765 89999999999999999999888877554221 22111


Q ss_pred             hhhhc------------CCCCc-cccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           80 VNDWL------------PISTM-EVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        80 ~~~~~------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ....+            ..... ....... .+..+....+.....+...++..++.+||++|.+-.+++.|+-
T Consensus       273 LLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps-~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~  345 (449)
T KOG0664|consen  273 LLGTPSQEAMKYACEGAKNHVLRAGLRAPD-TQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY  345 (449)
T ss_pred             HhCCCcHHHHHHHhhhhHHHhhccCCCCCC-ccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence            11100            00000 0000000 0000001111223344677889999999999999998888764

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.62  E-value=3.4e-16  Score=112.49  Aligned_cols=120  Identities=20%  Similarity=0.220  Sum_probs=86.8

Q ss_pred             CceeeecccccccccCCCCccccccccccccccCCCCCCCCCC-CCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~-~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      +.+||+|||++..+..   .......+|++.|.|||+..+..| .+.+|+|++|+++|.++.|..||++..--.  +   
T Consensus       192 mnikIaDfgfS~~~~~---~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~--L---  263 (596)
T KOG0586|consen  192 MNIKIADFGFSTFFDY---GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE--L---  263 (596)
T ss_pred             cceeeeccccceeecc---cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc--c---
Confidence            4689999999998752   223456899999999999998886 577999999999999999999997632110  0   


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                                  -...+......+..    ...++.++++++|..+|.+|++++++..+=+....
T Consensus       264 ------------r~rvl~gk~rIp~~----ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~  312 (596)
T KOG0586|consen  264 ------------RPRVLRGKYRIPFY----MSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL  312 (596)
T ss_pred             ------------cchheeeeecccce----eechhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence                        00111111111111    12336789999999999999999999988765544

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.62  E-value=1.5e-15  Score=101.84  Aligned_cols=114  Identities=24%  Similarity=0.254  Sum_probs=78.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .++|+|||++.......  .......++..|++||...+..++.++|+|++|++++++++|..||......  .......
T Consensus       131 ~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~  206 (250)
T cd05123         131 HIKLTDFGLAKELSSEG--SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK--EIYEKIL  206 (250)
T ss_pred             cEEEeecCcceecccCC--CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHh
Confidence            47899999988754321  1223456788999999998777889999999999999999999998654321  1111000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH---HHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA---KEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~---~~vl~~  138 (161)
                      .   ..      .          ..+...+..+.+++.+||..||+.|||+   .+++.|
T Consensus       207 ~---~~------~----------~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~  247 (250)
T cd05123         207 K---DP------L----------RFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAH  247 (250)
T ss_pred             c---CC------C----------CCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhC
Confidence            0   00      0          0011113457899999999999999999   666554

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.61  E-value=6.3e-16  Score=103.26  Aligned_cols=101  Identities=21%  Similarity=0.149  Sum_probs=69.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .++++|||.+..+...     .....++..|++||...+..++.++|+||+|++++++++|..|+........       
T Consensus       123 ~~~l~df~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~-------  190 (237)
T cd05576         123 HIQLTYFSRWSEVEDS-----CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN-------  190 (237)
T ss_pred             CEEEecccchhccccc-----cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc-------
Confidence            3689999988665321     1223456779999998877789999999999999999999887643111000       


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA  132 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~  132 (161)
                              .....          ..+...+..+.+++.+||+.||++|+++
T Consensus       191 --------~~~~~----------~~~~~~~~~~~~li~~~l~~dp~~R~~~  223 (237)
T cd05576         191 --------THTTL----------NIPEWVSEEARSLLQQLLQFNPTERLGA  223 (237)
T ss_pred             --------ccccc----------CCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence                    00000          0011233458899999999999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.61  E-value=3.7e-16  Score=109.19  Aligned_cols=121  Identities=14%  Similarity=0.197  Sum_probs=77.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-----CCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-----GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-----~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||+++.+..... .......|++.|+|||++.+     ..++.++|+||+|++++++++|+.||........ +
T Consensus       140 ~~kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~-~  217 (331)
T cd05624         140 HIRLADFGSCLKMNQDGT-VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET-Y  217 (331)
T ss_pred             CEEEEeccceeeccCCCc-eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHH-H
Confidence            479999999987643222 12233569999999998865     3578899999999999999999999965332111 1


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCccc--CCCHHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQ--RINAKEIVTKL  139 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~--Rps~~~vl~~l  139 (161)
                      .    ......  ....  . ..      .....+..+.+++.+||..++++  |+++++++.|-
T Consensus       218 ~----~i~~~~--~~~~--~-p~------~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~  267 (331)
T cd05624         218 G----KIMNHE--ERFQ--F-PS------HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHA  267 (331)
T ss_pred             H----HHHcCC--Cccc--C-CC------ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCC
Confidence            0    000000  0000  0 00      00123455888999999876654  46899998873

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.61  E-value=1.2e-15  Score=95.42  Aligned_cols=135  Identities=16%  Similarity=0.074  Sum_probs=86.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      ++|++|||++|-+.-..  ...+..+-|.+|++|+++.+.. |++..|+||-|||+.|+.. |++.|.+.+-.++.....
T Consensus       139 elkladfglarafgipv--rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif  216 (292)
T KOG0662|consen  139 ELKLADFGLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF  216 (292)
T ss_pred             cEEecccchhhhcCCce--EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHH
Confidence            47999999999875332  2345567899999999998876 8999999999999999997 666676655443322211


Q ss_pred             hhhhcC--CCCccc---cccccccchhhhhh---hhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           80 VNDWLP--ISTMEV---VDVNLLSQEDIHFV---AKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        80 ~~~~~~--~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ..-..+  ..+...   .+.+.+..+.....   .-+.....-++++.+.|.-+|.+|++++++++|
T Consensus       217 ~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh  283 (292)
T KOG0662|consen  217 RLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH  283 (292)
T ss_pred             HHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence            111111  112111   12211111110000   012233456789999999999999999998876

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.59  E-value=1.4e-15  Score=104.38  Aligned_cols=119  Identities=21%  Similarity=0.296  Sum_probs=77.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC--CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG--RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~--~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++....... .......|+..|++||.+...  .++.++||||+|++++++++|..||...... ......
T Consensus       143 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-~~~~~~  220 (290)
T cd05613         143 HVVLTDFGLSKEFHEDEV-ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK-NSQAEI  220 (290)
T ss_pred             CEEEeeCccceecccccc-cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc-ccHHHH
Confidence            579999999987533211 122345688899999988653  3678899999999999999999998542111 111111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTK  138 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~  138 (161)
                      .........                +.+...+..+.+++.+||+.||++||     ++.+++.|
T Consensus       221 ~~~~~~~~~----------------~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~  268 (290)
T cd05613         221 SRRILKSEP----------------PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH  268 (290)
T ss_pred             HHHhhccCC----------------CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence            110000000                00112334578999999999999997     67877776

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.58  E-value=9.8e-16  Score=114.09  Aligned_cols=117  Identities=20%  Similarity=0.260  Sum_probs=84.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-----CCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-----RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-----~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .||++|||++..+..  ...+....+||+.|||||++...     .|+..+|+||+|++-.|+..|..|+.+.-+....+
T Consensus       161 ~VKLvDFGvSaQlds--T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF  238 (953)
T KOG0587|consen  161 EVKLVDFGVSAQLDS--TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALF  238 (953)
T ss_pred             cEEEeeeeeeeeeec--ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhc
Confidence            489999999987642  23345678999999999998643     38899999999999999999999986643322111


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .  ....+|..                ...+..-..++.+++..||..|-++||+..++++|
T Consensus       239 ~--IpRNPPPk----------------Lkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h  282 (953)
T KOG0587|consen  239 L--IPRNPPPK----------------LKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH  282 (953)
T ss_pred             c--CCCCCCcc----------------ccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence            1  00011100                00123345668999999999999999999888876

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.57  E-value=8.2e-17  Score=114.80  Aligned_cols=117  Identities=15%  Similarity=0.196  Sum_probs=87.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||||||+||++.   +...+...+||+.|.|||++....|+...|+||.|+|+|-.++|.+||.....-...++.   
T Consensus       705 QvKlCDFGfARiIg---EksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQN---  778 (888)
T KOG4236|consen  705 QVKLCDFGFARIIG---EKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQN---  778 (888)
T ss_pred             ceeeccccceeecc---hhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhc---
Confidence            47999999999984   223345689999999999999999999999999999999999999998532111111110   


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                               .       ...++.....+...+.++||...|+..-.+|-|....+.|.+
T Consensus       779 ---------A-------aFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~W  821 (888)
T KOG4236|consen  779 ---------A-------AFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPW  821 (888)
T ss_pred             ---------c-------ccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchh
Confidence                     0       001111224566677899999999999999999988887754

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.55  E-value=2.1e-15  Score=101.74  Aligned_cols=135  Identities=13%  Similarity=0.137  Sum_probs=90.0

Q ss_pred             eeeecccccccccCCCCc-----cccccccccccccCCCCCCC-----CCCCCCccchhhhHHHHHHHhcCCCCcccccc
Q 043981            3 AHLSDFSIAKLLTGEDQS-----MTQTQTLATIGYMAPEYGRE-----GRVSANGDVYSFGIMLMETFTGKKPTDEIFNE   72 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~-----~~~~~~~g~~~~~~Pe~~~~-----~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~   72 (161)
                      +|||||.+..-+..+...     ....+.+|+..|||||++..     ..|+.++|.||+|+|+|-|++|-.||.+...+
T Consensus       218 vKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~  297 (463)
T KOG0607|consen  218 VKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGA  297 (463)
T ss_pred             eeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCC
Confidence            799999887654322221     12235789999999997642     23899999999999999999999999876554


Q ss_pred             ccchhH--HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           73 EMTLKH--WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        73 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      +..+..  .++... .   ..+.......+.++.......+.+..+++...|..|+.+|.++.+++.|-+.
T Consensus       298 dCGWdrGe~Cr~CQ-~---~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~  364 (463)
T KOG0607|consen  298 DCGWDRGEVCRVCQ-N---KLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWV  364 (463)
T ss_pred             cCCccCCCccHHHH-H---HHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccc
Confidence            432211  000000 0   0011111223334444467778889999999999999999999999986543

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.53  E-value=2.3e-15  Score=114.85  Aligned_cols=119  Identities=18%  Similarity=0.269  Sum_probs=82.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-----CCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-----GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-----~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      ++||+|||.+-.+..++. ......+|||-|.+||++..     ..|...+|.||+|+++|||+.|..||+...     +
T Consensus       213 HikLADFGsClkm~~dG~-V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads-----l  286 (1317)
T KOG0612|consen  213 HIKLADFGSCLKMDADGT-VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS-----L  286 (1317)
T ss_pred             cEeeccchhHHhcCCCCc-EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH-----H
Confidence            689999999988865433 34456789999999998852     348899999999999999999999996521     1


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCC---HHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRIN---AKEIVTKL  139 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps---~~~vl~~l  139 (161)
                      ..-+..+.            ..+..+.++.....+++..+||.+.+. +|+.|..   ++++..|.
T Consensus       287 veTY~KIm------------~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~Hp  339 (1317)
T KOG0612|consen  287 VETYGKIM------------NHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHP  339 (1317)
T ss_pred             HHHHHHHh------------chhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCc
Confidence            11111111            111112222223456678888887654 5888887   88888774

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.50  E-value=9e-15  Score=94.61  Aligned_cols=134  Identities=17%  Similarity=0.123  Sum_probs=86.7

Q ss_pred             eeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh-
Q 043981            3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV-   80 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~-   80 (161)
                      ++|+|+|+|.++-.+.+++.   .+.+..|--||.+...+ |+...|+|||||++..|+-.+.||.........+.... 
T Consensus       172 LrlIDWGLAEFYHp~~eYnV---RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIak  248 (338)
T KOG0668|consen  172 LRLIDWGLAEFYHPGKEYNV---RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAK  248 (338)
T ss_pred             eeeeecchHhhcCCCceeee---eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHH
Confidence            68999999998865555432   45777888999887766 89999999999999999999988866544333222211 


Q ss_pred             -----------hhhcCCCCcccccccc--ccc---hh-hhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 -----------NDWLPISTMEVVDVNL--LSQ---ED-IHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 -----------~~~~~~~~~~~~~~~~--~~~---~~-~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                                 ..+.-. +...+...+  ...   .. .......-..++.++|+.+.|.+|-..|+||+|++.|--
T Consensus       249 VLGt~el~~Yl~KY~i~-Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~Hpy  324 (338)
T KOG0668|consen  249 VLGTDELYAYLNKYQID-LDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPY  324 (338)
T ss_pred             HhChHHHHHHHHHHccC-CChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCch
Confidence                       111100 100000000  000   00 011111223477999999999999999999999998843

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.48  E-value=3.6e-14  Score=96.68  Aligned_cols=66  Identities=26%  Similarity=0.443  Sum_probs=57.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEI   69 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~   69 (161)
                      ++|++|+|+++.-.....  ..+.++||+-|.|||++.+..|....|.|++|++++||..|+.||+-.
T Consensus       389 hikltdygmcke~l~~gd--~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdiv  454 (593)
T KOG0695|consen  389 HIKLTDYGMCKEGLGPGD--TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIV  454 (593)
T ss_pred             ceeecccchhhcCCCCCc--ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCccee
Confidence            579999999987543333  457799999999999999999999999999999999999999999653

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.47  E-value=1.2e-13  Score=101.24  Aligned_cols=136  Identities=18%  Similarity=0.159  Sum_probs=84.3

Q ss_pred             eeeecccccccccCCCCccccccccccccccCCCCCC-CCCCCCCccchhhhHHHHHHHhcCCCCccccccc--cchhHH
Q 043981            3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR-EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEE--MTLKHW   79 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~-~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~--~~~~~~   79 (161)
                      =||+|||.|+.+..+.   ...+.+||..|.+||+.. ...|+..+|.||||+++|+.+||..||-......  .+..-.
T Consensus       163 yKLtDfG~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~  239 (732)
T KOG4250|consen  163 YKLTDFGAARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWH  239 (732)
T ss_pred             EeeecccccccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhh
Confidence            4899999999875332   456689999999999998 4779999999999999999999999985432211  111111


Q ss_pred             hhhhcCCCCcc--------ccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC--CHHHHHHHHHHhH
Q 043981           80 VNDWLPISTME--------VVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI--NAKEIVTKLLKIR  143 (161)
Q Consensus        80 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp--s~~~vl~~l~~~~  143 (161)
                      .....+....-        .+.....  .+.+..........+-+++..+|..+|++|.  .+.+....+..+.
T Consensus       240 ~~tkkp~~v~i~~~~~eNgpv~~s~~--lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL  311 (732)
T KOG4250|consen  240 IITKKPSGVAIGAQEEENGPVEWSST--LPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDIL  311 (732)
T ss_pred             hhccCCCceeEeeecccCCceeeecc--CCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHH
Confidence            11111111100        1111111  1111112234445567888999999999999  5555544444443

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.46  E-value=3.8e-14  Score=105.33  Aligned_cols=125  Identities=17%  Similarity=0.182  Sum_probs=87.7

Q ss_pred             ceeeecccccccccCCCCc--cccccccccccccCCCCCCCCCCCCC-ccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQS--MTQTQTLATIGYMAPEYGREGRVSAN-GDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~--~~~~~~~g~~~~~~Pe~~~~~~~~~~-~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      ++||+|||.+..+....+.  ......+|+..|+|||++.+..|+.. .||||.|+++..|++|+.|+.....+...+..
T Consensus       458 ~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~  537 (601)
T KOG0590|consen  458 ILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT  537 (601)
T ss_pred             ceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh
Confidence            5799999999887544333  34456789999999999998888765 79999999999999999998665444332200


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                        ...        .......  ..........+...+.+|.+||+.+|.+|.|++++++.
T Consensus       538 --~~~--------~~~~~~~--~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d  585 (601)
T KOG0590|consen  538 --NNY--------SDQRNIF--EGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND  585 (601)
T ss_pred             --hcc--------ccccccc--cChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence              000        0000000  00111234556678899999999999999999999864

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.45  E-value=5.3e-14  Score=89.69  Aligned_cols=77  Identities=29%  Similarity=0.342  Sum_probs=57.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC----CCCCCCccchhhhHHHHHHHhcCCCCccccccccchh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE----GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~----~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~   77 (161)
                      .+||||||++-.+.+   +.-.+...|-..|+|||.+..    ..|+.++||||+|+.+.|+.+++.||+.....-..+.
T Consensus       187 qVKiCDFGIsG~L~d---SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLk  263 (282)
T KOG0984|consen  187 QVKICDFGISGYLVD---SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLK  263 (282)
T ss_pred             cEEEcccccceeehh---hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHH
Confidence            489999999876632   211222457778999998753    2599999999999999999999999987665544444


Q ss_pred             HHhh
Q 043981           78 HWVN   81 (161)
Q Consensus        78 ~~~~   81 (161)
                      +.+.
T Consensus       264 qvVe  267 (282)
T KOG0984|consen  264 QVVE  267 (282)
T ss_pred             HHhc
Confidence            4433

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.44  E-value=1.7e-13  Score=99.95  Aligned_cols=129  Identities=16%  Similarity=0.164  Sum_probs=73.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC--------------------C--CCCccchhhhHHHHHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR--------------------V--SANGDVYSFGIMLMET   59 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~--------------------~--~~~~dv~s~g~il~e~   59 (161)
                      .+||+|||+++.+..... .......+++.|++||.+....                    +  ....|+||+|+++++|
T Consensus       347 ~~kL~DFGla~~~~~~~~-~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em  425 (507)
T PLN03224        347 QVKIIDFGAAVDMCTGIN-FNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQM  425 (507)
T ss_pred             cEEEEeCcCccccccCCc-cCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHH
Confidence            579999999976533211 1112234578999999875322                    1  1246999999999999


Q ss_pred             HhcCC-CCccccccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCc---ccCCCHHHH
Q 043981           60 FTGKK-PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESP---EQRINAKEI  135 (161)
Q Consensus        60 ~~g~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp---~~Rps~~~v  135 (161)
                      +++.. |+.........+........     .+   ....................++|+.++|..+|   .+|+|++++
T Consensus       426 ~~~~l~p~~~~~~f~~~~~~~~~~~~-----~~---r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~ea  497 (507)
T PLN03224        426 CVPELRPVANIRLFNTELRQYDNDLN-----RW---RMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQA  497 (507)
T ss_pred             HhCCCCCccchhhhhhHHhhccchHH-----HH---HhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHH
Confidence            99874 66432211111110000000     00   00000000111122334568999999999876   689999999


Q ss_pred             HHHH
Q 043981          136 VTKL  139 (161)
Q Consensus       136 l~~l  139 (161)
                      +.|-
T Consensus       498 L~Hp  501 (507)
T PLN03224        498 LSHR  501 (507)
T ss_pred             hCCC
Confidence            9884

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.37  E-value=2.1e-13  Score=97.11  Aligned_cols=112  Identities=24%  Similarity=0.332  Sum_probs=73.5

Q ss_pred             ceeeecccccccccCCC----CccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGED----QSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~----~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~   76 (161)
                      .+||.|||+........    .....+..+||.+||+||-+.+..|+.++|||++|++++|++. -...+...    ..+
T Consensus       394 q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~----~t~  469 (516)
T KOG1033|consen  394 QLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI----ATL  469 (516)
T ss_pred             hhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH----Hhh
Confidence            36899999988765433    1224456789999999999999999999999999999999997 33333221    111


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIV  136 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl  136 (161)
                      ...-..        .+.+.           .....++-..|+..++...|..||++.++.
T Consensus       470 ~d~r~g--------~ip~~-----------~~~d~p~e~~ll~~lls~~p~~RP~~~~~~  510 (516)
T KOG1033|consen  470 TDIRDG--------IIPPE-----------FLQDYPEEYTLLQQLLSPSPEERPSAIEVA  510 (516)
T ss_pred             hhhhcC--------CCChH-----------HhhcCcHHHHHHHHhcCCCcccCchHHHHh
Confidence            100000        00000           011122245789999999999999655443

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.32  E-value=4e-12  Score=91.50  Aligned_cols=133  Identities=25%  Similarity=0.305  Sum_probs=85.4

Q ss_pred             CceeeecccccccccCCCCccccccccccccccCCCCCCCCC-------CCCCccchhhhHHHHHHHhcCCCCccccccc
Q 043981            1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-------VSANGDVYSFGIMLMETFTGKKPTDEIFNEE   73 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-------~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~   73 (161)
                      |.+||+|||+.............+...-...|.+||.+....       .+.+.|+||||++++|++.++.||+......
T Consensus        86 w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~  165 (484)
T KOG1023|consen   86 WVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVE  165 (484)
T ss_pred             EEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccC
Confidence            578999999987753211111122223456799999887532       3666999999999999999999997744432


Q ss_pred             c--chhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           74 M--TLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        74 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      .  .+........    ...+-+....        .....+.+..++..||..+|..||+++++-..+..+...
T Consensus       166 ~~~eii~~~~~~~----~~~~rP~i~~--------~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~  227 (484)
T KOG1023|consen  166 DPDEIILRVKKGG----SNPFRPSIEL--------LNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG  227 (484)
T ss_pred             ChHHHHHHHHhcC----CCCcCcchhh--------hhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence            2  2222211100    0001111100        013334688999999999999999999999888887764

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.29  E-value=1.3e-12  Score=86.81  Aligned_cols=98  Identities=23%  Similarity=0.257  Sum_probs=73.1

Q ss_pred             cccccccCCCCCCCCC---CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhhhhcCCCCccccccccccchhhh
Q 043981           27 LATIGYMAPEYGREGR---VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIH  103 (161)
Q Consensus        27 ~g~~~~~~Pe~~~~~~---~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (161)
                      .-.+.|++||.+...+   .-..+|+|||++++||+.++..||....+.+.....                   .-++.+
T Consensus       347 ~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki-------------------aleglr  407 (448)
T KOG0195|consen  347 AYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI-------------------ALEGLR  407 (448)
T ss_pred             ccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh-------------------hhcccc
Confidence            4567899999987655   345689999999999999999999876553322211                   011222


Q ss_pred             hhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981          104 FVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus       104 ~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                      ...++..++.+.+|+.-|+..||.+||.+..++-.|+++.
T Consensus       408 v~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  408 VHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             ccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence            2234555666889999999999999999999999998874

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.26  E-value=1e-11  Score=80.71  Aligned_cols=84  Identities=33%  Similarity=0.475  Sum_probs=67.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .++|+|||.+........  ......+...|++||..... .++.+.|+|++|++++++                     
T Consensus       131 ~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------  187 (215)
T cd00180         131 KVKLADFGLSKLLTSDKS--LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------  187 (215)
T ss_pred             cEEEecCCceEEccCCcc--hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------
Confidence            478999999987543211  12334577789999998776 678899999999999998                     


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                                                     ..+.+++..|+..+|.+||++.++++++
T Consensus       188 -------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 -------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             -------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence                                           2378899999999999999999998764

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.25  E-value=3.2e-12  Score=93.56  Aligned_cols=118  Identities=19%  Similarity=0.324  Sum_probs=78.8

Q ss_pred             eeeecccccccccCCCCccccccccccccccCCCCC---CCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYG---REGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~---~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      +|++|||.+-.+...  ......++||++||+||+.   ....|+..+|+|+.|+.-.|+..-+.|.....+....+   
T Consensus       151 vklaDfgvsaqitat--i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~---  225 (829)
T KOG0576|consen  151 VKLADFGVSAQITAT--IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALF---  225 (829)
T ss_pred             eeecccCchhhhhhh--hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHH---
Confidence            799999998766432  2345668999999999975   34569999999999999889888777743322211111   


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                         ....+......          ......-.+.+.+|++.+|-.+|++|||+..++.|
T Consensus       226 ---LmTkS~~qpp~----------lkDk~kws~~fh~fvK~altknpKkRptaeklL~h  271 (829)
T KOG0576|consen  226 ---LMTKSGFQPPT----------LKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH  271 (829)
T ss_pred             ---HhhccCCCCCc----------ccCCccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence               00011111000          00112334558899999999999999999988774

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.22  E-value=3.7e-12  Score=88.45  Aligned_cols=113  Identities=18%  Similarity=0.308  Sum_probs=71.1

Q ss_pred             ccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh---------------h---hcCC
Q 043981           26 TLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN---------------D---WLPI   86 (161)
Q Consensus        26 ~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~---------------~---~~~~   86 (161)
                      ..||++|+|||++...+ -+++.||||.|+|++.++++..||.....+-..+.+.+-               .   +.+.
T Consensus       237 rAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ks  316 (418)
T KOG1167|consen  237 RAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKS  316 (418)
T ss_pred             cCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccc
Confidence            56999999999987655 688899999999999999999998765544333222110               0   0000


Q ss_pred             CCccc----cccccc-----cc--h--hhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           87 STMEV----VDVNLL-----SQ--E--DIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        87 ~~~~~----~~~~~~-----~~--~--~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .....    ......     .+  .  ..........+..+.+|+.+||+.||.+|.|++++|.|
T Consensus       317 n~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH  381 (418)
T KOG1167|consen  317 NIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH  381 (418)
T ss_pred             cccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence            00000    000000     00  0  00011112223468899999999999999999999987

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.14  E-value=5e-11  Score=87.47  Aligned_cols=47  Identities=26%  Similarity=0.316  Sum_probs=42.9

Q ss_pred             cccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccc
Q 043981           25 QTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFN   71 (161)
Q Consensus        25 ~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~   71 (161)
                      ..+||+-|+|||++....|+..+|.|+.|+|++||+.|+.||....+
T Consensus       830 slvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp  876 (1034)
T KOG0608|consen  830 SLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTP  876 (1034)
T ss_pred             hhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCC
Confidence            35799999999999988999999999999999999999999977554

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.14  E-value=3.6e-11  Score=79.92  Aligned_cols=121  Identities=18%  Similarity=0.183  Sum_probs=74.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-----CCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-----GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-----~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+|+||||.++........     .--+..|.+||+...     ...++..|+|.||++++.+++|+.|++........+
T Consensus       161 rvKlcDFG~t~k~g~tV~~-----~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y  235 (378)
T KOG1345|consen  161 RVKLCDFGLTRKVGTTVKY-----LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPY  235 (378)
T ss_pred             EEEeeecccccccCceehh-----hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchH
Confidence            5899999999886432222     223445788885432     235788999999999999999999998665555555


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccC---CCHHHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQR---INAKEIVTKLL  140 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~R---ps~~~vl~~l~  140 (161)
                      ..|.....+... ...+  .          ....++.+..+..+-|..++.+|   .+++.....++
T Consensus       236 ~~~~~w~~rk~~-~~P~--~----------F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w  289 (378)
T KOG1345|consen  236 WEWEQWLKRKNP-ALPK--K----------FNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLW  289 (378)
T ss_pred             HHHHHHhcccCc-cCch--h----------hcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHH
Confidence            444322222111 1000  0          01112336677888899999999   45555444443

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.02  E-value=1.1e-10  Score=89.69  Aligned_cols=109  Identities=23%  Similarity=0.201  Sum_probs=76.4

Q ss_pred             ceeeecccccccccCC----CC--c-------cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcc
Q 043981            2 VAHLSDFSIAKLLTGE----DQ--S-------MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDE   68 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~----~~--~-------~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~   68 (161)
                      ++|++|||++....-.    .+  .       ......+||+.|.+|||++-+.|...+|.|++|+|+||.+.|+.||.+
T Consensus       181 hiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffG  260 (1205)
T KOG0606|consen  181 HIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG  260 (1205)
T ss_pred             cccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccC
Confidence            4789999998864211    00  0       112346899999999999999999999999999999999999999988


Q ss_pred             ccccccchh--HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC
Q 043981           69 IFNEEMTLK--HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI  130 (161)
Q Consensus        69 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp  130 (161)
                      .++++.--.  .....|+              +.      ....+.+..+++...|+.+|..|.
T Consensus       261 dtpeelfg~visd~i~wp--------------E~------dea~p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  261 DTPEELFGQVISDDIEWP--------------EE------DEALPPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             CCHHHHHhhhhhhhcccc--------------cc------CcCCCHHHHHHHHHHHHhChHhhc
Confidence            766543111  1001110              00      112234577889999999999987

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.85  E-value=5.1e-09  Score=68.97  Aligned_cols=66  Identities=24%  Similarity=0.380  Sum_probs=51.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCC-CCCCCCCCccchhhhHHHHHHHhcCCCCcc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYG-REGRVSANGDVYSFGIMLMETFTGKKPTDE   68 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~-~~~~~~~~~dv~s~g~il~e~~~g~~p~~~   68 (161)
                      .++|+|||.+........ .......++..|++||.. ....++.++|+|++|++++++++|+.||..
T Consensus       136 ~~~l~d~g~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      136 LVKLADFGLARFIHRDLA-ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             CEEEeeCceeeEecCccc-ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            578999999887643220 012335677889999988 555678899999999999999999999955

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.82  E-value=3e-09  Score=77.74  Aligned_cols=98  Identities=26%  Similarity=0.327  Sum_probs=70.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      ++|+.|||+++.......      .+||..||+||++.  .+...+|.||+|++++++++|..||..   +.+..+    
T Consensus       135 hi~~tdfglske~v~~~~------~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~---~~~~~I----  199 (612)
T KOG0603|consen  135 HIKLTDFGLSKEAVKEKI------ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG---DTMKRI----  199 (612)
T ss_pred             ccccCCchhhhHhHhhhh------cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch---HHHHHH----
Confidence            478999999987642211      28999999999997  578889999999999999999999976   111000    


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA  132 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~  132 (161)
                        ..            .+    ...+.+......+++..++..+|..|.-.
T Consensus       200 --l~------------~~----~~~p~~l~~~a~~~~~~l~~r~p~nrLg~  232 (612)
T KOG0603|consen  200 --LK------------AE----LEMPRELSAEARSLFRQLFKRNPENRLGA  232 (612)
T ss_pred             --hh------------hc----cCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence              00            00    01134455567788888999999988854

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=98.80  E-value=1.1e-09  Score=79.64  Aligned_cols=61  Identities=23%  Similarity=0.321  Sum_probs=50.8

Q ss_pred             eeeecccccccccCCCCccccccccccccccCCCCCCCCCC-CCCccchhhhHHHHHHHhcCCCCc
Q 043981            3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTD   67 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~-~~~~dv~s~g~il~e~~~g~~p~~   67 (161)
                      +||+|||.+.....    .....++||..|.|||++.+..| ....|||++|+++|.++...-||.
T Consensus       709 ~klidfgsaa~~ks----gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  709 VKLIDFGSAAYTKS----GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             EEEeeccchhhhcC----CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            79999999876532    23345789999999999999887 566899999999999999888875

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.67  E-value=1.1e-07  Score=65.62  Aligned_cols=127  Identities=24%  Similarity=0.306  Sum_probs=80.1

Q ss_pred             ceeeecccccccccCCCCcc----ccccccccccccCCCCCCC---CCCCCCccchhhhHHHHHHHhcCCCCcccccc--
Q 043981            2 VAHLSDFSIAKLLTGEDQSM----TQTQTLATIGYMAPEYGRE---GRVSANGDVYSFGIMLMETFTGKKPTDEIFNE--   72 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~----~~~~~~g~~~~~~Pe~~~~---~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~--   72 (161)
                      .++++|||.++.+.......    ......|+..|++||.+.+   ..+....|+|++|+++++++.+..|+......  
T Consensus       140 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~  219 (384)
T COG0515         140 VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSA  219 (384)
T ss_pred             eEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcccc
Confidence            47899999998654322211    2356789999999999887   46888999999999999999999996554431  


Q ss_pred             ccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           73 EMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ........................          .......+.+++..++..+|..|.+..+...+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         220 TSQTLKIILELPTPSLASPLSPSN----------PELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             HHHHHHHHHhcCCcccccccCccc----------cchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            111111111100000000000000          01122457789999999999999998877765

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=98.60  E-value=2.8e-08  Score=77.35  Aligned_cols=88  Identities=20%  Similarity=0.253  Sum_probs=56.3

Q ss_pred             cccCCCCCCC----------CC-CCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHhhhhcCCCCcccccccccc
Q 043981           31 GYMAPEYGRE----------GR-VSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLS   98 (161)
Q Consensus        31 ~~~~Pe~~~~----------~~-~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (161)
                      .|.|||....          .. .+.+.||||.||++.|+++ |+++|.-.     .+.+               ++...
T Consensus       192 CYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-----QL~a---------------Yr~~~  251 (1431)
T KOG1240|consen  192 CYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-----QLLA---------------YRSGN  251 (1431)
T ss_pred             eecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-----HHHh---------------HhccC
Confidence            5899996543          12 5678999999999999998 66676320     0100               00000


Q ss_pred             chhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           99 QEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ..........-....+++++..|++.||.+|.+|++.|+.
T Consensus       252 ~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  252 ADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             ccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            1111111111122347889999999999999999999987

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.55  E-value=2.7e-08  Score=67.80  Aligned_cols=97  Identities=20%  Similarity=0.173  Sum_probs=57.0

Q ss_pred             eeeecccccccccCCCCccccccccccccccCCCCCCC--------CCCCCCccchhhhHHHHHHHhcCCCCcccccccc
Q 043981            3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE--------GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM   74 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~--------~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~   74 (161)
                      +.|+||+.....+   .....  ...+..|.+||....        ..++.+.|.|++|+++|.++.+..||.....+..
T Consensus       184 v~Lg~F~~~~r~g---~~~~~--~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~  258 (288)
T PF14531_consen  184 VFLGDFSSLVRAG---TRYRC--SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEAD  258 (288)
T ss_dssp             EEE--GGGEEETT---EEEEG--GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGST
T ss_pred             EEEcChHHHeecC---ceeec--cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCcccc
Confidence            6788888765532   11111  234467889986533        2368889999999999999999999875433211


Q ss_pred             chhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccC
Q 043981           75 TLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQR  129 (161)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~R  129 (161)
                      ...                  ....+      . +.++.+..||..+|+++|.+|
T Consensus       259 ~~~------------------~f~~C------~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  259 PEW------------------DFSRC------R-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             SGG------------------GGTTS------S----HHHHHHHHHHT-SSGGGS
T ss_pred             ccc------------------cchhc------C-CcCHHHHHHHHHHccCCcccC
Confidence            110                  01111      2 445668899999999999998

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=98.49  E-value=4.2e-07  Score=64.12  Aligned_cols=112  Identities=13%  Similarity=0.127  Sum_probs=70.1

Q ss_pred             eeeecccccccccCCC----CccccccccccccccCCCCCCCCC------CCCCccchhhhHHHHHHHhcCCCCcccccc
Q 043981            3 AHLSDFSIAKLLTGED----QSMTQTQTLATIGYMAPEYGREGR------VSANGDVYSFGIMLMETFTGKKPTDEIFNE   72 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~----~~~~~~~~~g~~~~~~Pe~~~~~~------~~~~~dv~s~g~il~e~~~g~~p~~~~~~~   72 (161)
                      +.|+|||++---...+    .....-...|+...|+||+....+      --.++|.|+.|.+-||++...-||.+..+.
T Consensus       384 LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem  463 (598)
T KOG4158|consen  384 LVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM  463 (598)
T ss_pred             EEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchh
Confidence            5689999975321100    011112234777789999865322      246799999999999999999999763222


Q ss_pred             ccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHH
Q 043981           73 EMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK  133 (161)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~  133 (161)
                      ......+..                   .-....+..+++.+.+++...|+.||.+|++..
T Consensus       464 ~L~~r~Yqe-------------------~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  464 LLDTRTYQE-------------------SQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             eechhhhhh-------------------hhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence            111111111                   111112345566788999999999999999854

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.36  E-value=9.3e-08  Score=71.81  Aligned_cols=126  Identities=18%  Similarity=0.213  Sum_probs=84.7

Q ss_pred             ceeeecccccccccC-CCCccccccccc-cccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTG-EDQSMTQTQTLA-TIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~-~~~~~~~~~~~g-~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      ..|++|||+|..+.. ++........+| ++.|.+||...+.. .....|+||.|+++..+++|..|..........+..
T Consensus       163 ~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~  242 (601)
T KOG0590|consen  163 ALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSS  242 (601)
T ss_pred             cccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccccee
Confidence            368999999998765 444444556778 99999999998754 567789999999999999999997654443332222


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                      |.....                ...............+++.+++..+|..|.+.+++...-+-..
T Consensus       243 ~~~~~~----------------~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  243 WKSNKG----------------RFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             eccccc----------------ccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence            211100                0000001222334677889999999999999888766554444

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.06  E-value=4.1e-05  Score=53.74  Aligned_cols=127  Identities=15%  Similarity=0.102  Sum_probs=81.0

Q ss_pred             ceeeecccccc--cccCCCCc----cc--cccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccc
Q 043981            2 VAHLSDFSIAK--LLTGEDQS----MT--QTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEE   73 (161)
Q Consensus         2 ~~ki~DFG~a~--~~~~~~~~----~~--~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~   73 (161)
                      .+.|.|||+++  .+......    ..  .....||..|+++....+...+.+-|+||++.++.++..|..|+.......
T Consensus       165 ~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~  244 (322)
T KOG1164|consen  165 TLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTD  244 (322)
T ss_pred             eEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccc
Confidence            47899999999  43222111    11  123459999999999888889999999999999999999999985543321


Q ss_pred             c--chhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           74 M--TLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        74 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      .  .+...........                  .....+.++.+++..+-..+...+|.-..+...+.......
T Consensus       245 ~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~  301 (322)
T KOG1164|consen  245 LKSKFEKDPRKLLTDR------------------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE  301 (322)
T ss_pred             hHHHHHHHhhhhcccc------------------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence            1  1111000000000                  01112334556666666688999999888888877766543

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.45  E-value=0.00035  Score=55.24  Aligned_cols=64  Identities=13%  Similarity=-0.043  Sum_probs=53.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCC
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP   65 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p   65 (161)
                      .++|+|||.+..+..-..........+|-.+.++|+..+.+|+.++|.|.++.+++.|+-|+.-
T Consensus       839 ~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~  902 (974)
T KOG1166|consen  839 GLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM  902 (974)
T ss_pred             ceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence            4799999999877533333345667889999999999999999999999999999999987654

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=97.34  E-value=0.0033  Score=45.66  Aligned_cols=125  Identities=17%  Similarity=0.125  Sum_probs=71.0

Q ss_pred             cccccccccCCCCCC-----CCCCCCCccchhhhHHHHHHHhc-CCCCcccccccc---chh-HHhhhhcCCCCcccccc
Q 043981           25 QTLATIGYMAPEYGR-----EGRVSANGDVYSFGIMLMETFTG-KKPTDEIFNEEM---TLK-HWVNDWLPISTMEVVDV   94 (161)
Q Consensus        25 ~~~g~~~~~~Pe~~~-----~~~~~~~~dv~s~g~il~e~~~g-~~p~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~   94 (161)
                      ..+|...|.+||.-.     +..-+...|.|.+++++++++.| +.||.+..-...   .+. .......-    -.-+.
T Consensus       175 cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~----ya~~~  250 (637)
T COG4248         175 CPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFA----YASDQ  250 (637)
T ss_pred             cccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceee----echhc
Confidence            357888999999643     22346778999999999999985 889877432111   110 00000000    00000


Q ss_pred             ccccchhhhhhhhHHHHHHHHHHHHHhcccC--cccCCCHHHHHHHHHHhHHHhhhhccCc
Q 043981           95 NLLSQEDIHFVAKEQCVSFVFNLAMACTVES--PEQRINAKEIVTKLLKIRDSLLRNVGGR  153 (161)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~d--p~~Rps~~~vl~~l~~~~~~~~~~~~~~  153 (161)
                      ..........+.....++.+..+..+|+...  +.-|||++.=+..|.++.++...+.-..
T Consensus       251 ~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C~v~a  311 (637)
T COG4248         251 RRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKCTVSA  311 (637)
T ss_pred             cCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhhhhcc
Confidence            0000000000111233445666777777653  5689999999999999998877655433

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=97.28  E-value=0.0012  Score=46.17  Aligned_cols=70  Identities=21%  Similarity=0.257  Sum_probs=55.5

Q ss_pred             ceeeecccccccccCCCCc-----cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQS-----MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFN   71 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-----~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~   71 (161)
                      .+.|+|||+|+.+......     ....+..||..||+--...+..-+.+-|+=++|-+++..+.|..|+++.+.
T Consensus       167 ~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA  241 (449)
T KOG1165|consen  167 VIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA  241 (449)
T ss_pred             eEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccC
Confidence            4679999999987644332     222345699999987777777788889999999999999999999988654

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=97.03  E-value=0.00053  Score=54.32  Aligned_cols=91  Identities=26%  Similarity=0.307  Sum_probs=61.6

Q ss_pred             cccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhhhhcCCCCccccccccccchhhhh
Q 043981           25 QTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHF  104 (161)
Q Consensus        25 ~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (161)
                      ...||+.|.+||..++......+|.|+.|++++|.++|..||....++..- .    ......        ..-...   
T Consensus       994 ~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f-~----ni~~~~--------~~~p~g--- 1057 (1205)
T KOG0606|consen  994 AVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIF-E----NILNRD--------IPWPEG--- 1057 (1205)
T ss_pred             cccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhh-h----ccccCC--------CCCCCC---
Confidence            467999999999999999999999999999999999999998764443211 0    000000        000000   


Q ss_pred             hhhHHHHHHHHHHHHHhcccCcccCCCHH
Q 043981          105 VAKEQCVSFVFNLAMACTVESPEQRINAK  133 (161)
Q Consensus       105 ~~~~~~~~~~~~l~~~cl~~dp~~Rps~~  133 (161)
                        ....+.+..+++...+..+|.+|..+.
T Consensus      1058 --~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1058 --PEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             --ccccChhhhhhhhhhhccCchhccCcc
Confidence              112233456777888888888888764

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=96.62  E-value=0.0028  Score=47.05  Aligned_cols=115  Identities=17%  Similarity=0.230  Sum_probs=68.3

Q ss_pred             ceeeecccccccccCCCCcc---ccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSM---TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~---~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      ..+++|||+...+.......   ...+.-|...|++||+..+ -+....|++++|.++.+...+.......+...     
T Consensus       261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-----  334 (524)
T KOG0601|consen  261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSS-----  334 (524)
T ss_pred             eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCC-----
Confidence            45788999998876433221   1122256778999998864 46778999999999999988776543321110     


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVT  137 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~  137 (161)
                          |.+.  ....     .+..+.    ......+...+..|++.+|..|++++.+..
T Consensus       335 ----W~~~--r~~~-----ip~e~~----~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  335 ----WSQL--RQGY-----IPLEFC----EGGSSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             ----cccc--cccc-----Cchhhh----cCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence                0000  0000     000000    001122334778899999999999886654

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=96.37  E-value=0.0038  Score=43.81  Aligned_cols=94  Identities=17%  Similarity=0.245  Sum_probs=56.6

Q ss_pred             ccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhhhhcCCCCccccccccccchhhhhh
Q 043981           26 TLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFV  105 (161)
Q Consensus        26 ~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (161)
                      ..+.++|.+|+.=...+.+.++|||+||..-+++..+..--.....  ....+       ....+.+   .....++   
T Consensus       242 ~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS--~~~~e-------e~ia~~i---~~len~l---  306 (458)
T KOG1266|consen  242 NTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSES--KVEVE-------ENIANVI---IGLENGL---  306 (458)
T ss_pred             cccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcc--eeehh-------hhhhhhe---eeccCcc---
Confidence            3466788888876666678889999999998998876532110000  00000       0000000   0011111   


Q ss_pred             hhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981          106 AKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus       106 ~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                              -.+++.+|++-.|..||+|.+++.|...+
T Consensus       307 --------qr~~i~kcl~~eP~~rp~ar~llfHpllf  335 (458)
T KOG1266|consen  307 --------QRGSITKCLEGEPNGRPDARLLLFHPLLF  335 (458)
T ss_pred             --------ccCcCcccccCCCCCCcchhhhhcCceee
Confidence                    23578999999999999999998876443

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=96.20  E-value=0.0019  Score=49.08  Aligned_cols=116  Identities=14%  Similarity=0.122  Sum_probs=65.1

Q ss_pred             eeeecccccccccCCCCcc------cccc-ccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCcccccccc
Q 043981            3 AHLSDFSIAKLLTGEDQSM------TQTQ-TLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEM   74 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~------~~~~-~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~   74 (161)
                      .||+-|+.+....++.++.      ..+. ..-..-|.+||++.....+..+|++|+|++++.+.. |+..+...... .
T Consensus       139 wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~-~  217 (700)
T KOG2137|consen  139 WKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGL-L  217 (700)
T ss_pred             eeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCc-c
Confidence            3677777765544322211      1111 112346899999988778899999999999998874 44433321110 0


Q ss_pred             chhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHH
Q 043981           75 TLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI  135 (161)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v  135 (161)
                      ....   ...   ..+..      ...    .....+.++.+-+.+++..++.-||++..+
T Consensus       218 ~~~~---~~~---~~~~~------~~~----~s~~~p~el~~~l~k~l~~~~~~rp~~~~l  262 (700)
T KOG2137|consen  218 SYSF---SRN---LLNAG------AFG----YSNNLPSELRESLKKLLNGDSAVRPTLDLL  262 (700)
T ss_pred             hhhh---hhc---ccccc------ccc----ccccCcHHHHHHHHHHhcCCcccCcchhhh
Confidence            0000   000   00000      000    013455668888899999999999966544

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=95.07  E-value=0.0052  Score=41.29  Aligned_cols=70  Identities=21%  Similarity=0.148  Sum_probs=49.1

Q ss_pred             eeeecccccccccCCCCcc-----ccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccc
Q 043981            3 AHLSDFSIAKLLTGEDQSM-----TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNE   72 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~-----~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~   72 (161)
                      +-++|||+|+.+.......     ....-.||..|.+--...+..-+.+-|+=|+|.++...-.|..|+++....
T Consensus       153 l~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~  227 (341)
T KOG1163|consen  153 LYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA  227 (341)
T ss_pred             EEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh
Confidence            5689999999875432221     112346888887654444444566778999999988888899999886653

>PRK09188 serine/threonine protein kinase; Provisional

Probab=94.21  E-value=0.029  Score=40.29  Aligned_cols=38  Identities=18%  Similarity=0.158  Sum_probs=25.4

Q ss_pred             ceeeecccccccccCCCCc------cccccccccccccCCCCCC
Q 043981            2 VAHLSDFSIAKLLTGEDQS------MTQTQTLATIGYMAPEYGR   39 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~------~~~~~~~g~~~~~~Pe~~~   39 (161)
                      .+||+|||+|+.+......      .......++..|.+||++.
T Consensus       150 ~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~  193 (365)
T PRK09188        150 EAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT  193 (365)
T ss_pred             CEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence            4799999999976432211      1113456778889999875

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=94.15  E-value=0.032  Score=43.40  Aligned_cols=51  Identities=18%  Similarity=0.256  Sum_probs=33.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGI   54 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~   54 (161)
                      .+||+|||+++......  ......++++.|.+||...... -....++|++|.
T Consensus       142 ~vkL~DFGls~~~~~~~--~~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g~  193 (669)
T cd05610         142 HIKLTDFGLSKVTLNRE--LNMMDILTTPSMAKPKNDYSRTPGQVLSLISSLGF  193 (669)
T ss_pred             CEEEEeCCCCccccCCc--ccccccccCccccCccccccCCCCceeeeeeecCc
Confidence            58999999998754321  2233467889999998654332 233456677774

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=93.92  E-value=0.031  Score=41.95  Aligned_cols=83  Identities=17%  Similarity=0.181  Sum_probs=46.9

Q ss_pred             CCCccchhhhHHHHHHHhcCCCCccccccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcc
Q 043981           44 SANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV  123 (161)
Q Consensus        44 ~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~  123 (161)
                      ..++|||++|.++.++..|...+......+....  ............    ...  ... ...-.+...++++...|+.
T Consensus       109 ~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~--i~k~~~~d~~~~----~~a--~e~-~~~~~~d~~~~~~~~~c~~  179 (725)
T KOG1093|consen  109 GPKSDVWSLGFIILELYLGISLEAELTESEYLEI--LLKYYTDDQELL----STA--MEH-LIQLLADKKRLPLLKKCLW  179 (725)
T ss_pred             CcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHH--HHHhccCchhHH----HHH--HHH-HHHHhhhHhHHHHhccCCc
Confidence            3589999999999999988776654333211100  000000000000    000  000 2234566778899999999


Q ss_pred             cCcccCCCHHHH
Q 043981          124 ESPEQRINAKEI  135 (161)
Q Consensus       124 ~dp~~Rps~~~v  135 (161)
                      ..|..||...+.
T Consensus       180 ~~~~ir~l~~~~  191 (725)
T KOG1093|consen  180 LEPIIRPLPMEL  191 (725)
T ss_pred             cccccccchhHH
Confidence            999988865443

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=91.23  E-value=0.026  Score=37.85  Aligned_cols=42  Identities=12%  Similarity=0.165  Sum_probs=24.9

Q ss_pred             eeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHH
Q 043981            3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLME   58 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e   58 (161)
                      ++|+|||.++........              ..++....|+.++|+|++|+.+.-
T Consensus       173 i~liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~  214 (232)
T PRK10359        173 LRIIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLI  214 (232)
T ss_pred             EEEEECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehH
Confidence            578999987654210000              002233346678999999987653

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=89.03  E-value=0.36  Score=36.38  Aligned_cols=112  Identities=16%  Similarity=0.067  Sum_probs=62.7

Q ss_pred             eeeecccccccccCCCCcccccccccccccc--CCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYM--APEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~--~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .++.|||++..+.....     ...+..++.  ++.......+..++|+++||.-+.+.+++...-.....-   +.   
T Consensus       406 ~~~~~~~~~t~~~~~~~-----~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~---~~---  474 (524)
T KOG0601|consen  406 SKLGDFGCWTRLAFSSG-----VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS---LT---  474 (524)
T ss_pred             hhccccccccccceecc-----cccccccccccchhhccccccccccccccccccccccccCcccCcccccc---ee---
Confidence            46677777754211111     112222333  455555666899999999999988888766442110000   00   


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                                .      .......  .......+..+...++..++..|+.+.++..+.+-..
T Consensus       475 ----------i------~~~~~p~--~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~  519 (524)
T KOG0601|consen  475 ----------I------RSGDTPN--LPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR  519 (524)
T ss_pred             ----------e------ecccccC--CCchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence                      0      0000000  0111144667788899999999999988887766543

>PRK12274 serine/threonine protein kinase; Provisional

Probab=85.78  E-value=0.32  Score=32.33  Aligned_cols=67  Identities=15%  Similarity=0.068  Sum_probs=37.8

Q ss_pred             ceeeecccccccccCCCCc---cc--------cccccccccccCCCCCCCC-CCC-CCccchhhhHHHHHHHhcCCCCcc
Q 043981            2 VAHLSDFSIAKLLTGEDQS---MT--------QTQTLATIGYMAPEYGREG-RVS-ANGDVYSFGIMLMETFTGKKPTDE   68 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~---~~--------~~~~~g~~~~~~Pe~~~~~-~~~-~~~dv~s~g~il~e~~~g~~p~~~   68 (161)
                      .++|+|||++.........   ..        ......++.++.|+-.... ..+ ...+.++.|.-++.++|+..+.-+
T Consensus       130 ~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~  209 (218)
T PRK12274        130 SPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE  209 (218)
T ss_pred             CEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence            3789999999864322210   00        0111244556666532211 222 334556789999999999887543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	161
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		6e-12
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		2e-11
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-09
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		1e-08
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		2e-08
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		3e-08
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		8e-08
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		8e-08
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		8e-08
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		8e-08
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-07
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		3e-07
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		3e-07
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		4e-07
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		5e-07
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		5e-07
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		6e-07
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		1e-06
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		3e-06
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		3e-06
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		3e-06
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		4e-06
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		9e-06
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		9e-06
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		1e-05
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		1e-05
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		2e-05
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		2e-05
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		2e-05
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		2e-05
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		2e-05
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		2e-05
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		2e-05
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		2e-05
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		2e-05
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		2e-05
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		2e-05
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		2e-05
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		2e-05
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		2e-05
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		2e-05
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		2e-05
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		2e-05
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		2e-05
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		2e-05
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		3e-05
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		3e-05
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		3e-05
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		3e-05
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		3e-05
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		3e-05
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		3e-05
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		3e-05
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		3e-05
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		3e-05
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		3e-05
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		4e-05
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		4e-05
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		4e-05
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		4e-05
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		4e-05
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		4e-05
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		5e-05
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		6e-05
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		6e-05
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		7e-05
4fl3_A	635	Structural And Biophysical Characterization Of The		7e-05
4fl2_A	636	Structural And Biophysical Characterization Of The		7e-05
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-05
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		9e-05
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		9e-05
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		1e-04
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		1e-04
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-04
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		2e-04
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		2e-04
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		2e-04
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-04
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		2e-04
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		2e-04
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		2e-04
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		2e-04
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		2e-04
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		2e-04
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		2e-04
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		2e-04
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-04
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-04
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		2e-04
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		2e-04
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		2e-04
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-04
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		2e-04
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		2e-04
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		2e-04
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		2e-04
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		2e-04
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		2e-04
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		2e-04
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		2e-04
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-04
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		2e-04
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		2e-04
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		2e-04
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		2e-04
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-04
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		3e-04
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		3e-04
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-04
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		3e-04
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		3e-04
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		3e-04
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		3e-04
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		3e-04
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		3e-04
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		4e-04
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		4e-04
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-04
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		4e-04
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		4e-04
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		4e-04
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		5e-04
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		5e-04
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		5e-04
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		5e-04
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		5e-04
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		5e-04
4h58_A	275	Braf In Complex With Compound 3 Length = 275		5e-04
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		5e-04
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		5e-04
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		5e-04
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		5e-04
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		5e-04
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		5e-04
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		5e-04
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		5e-04
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		5e-04
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		5e-04
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		5e-04
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		5e-04
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		5e-04
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		5e-04
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		5e-04
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		6e-04
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		6e-04
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		6e-04
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		6e-04
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		6e-04
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		6e-04
2pl0_A	289	Lck Bound To Imatinib Length = 289		6e-04
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		6e-04
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		6e-04
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		6e-04
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		6e-04
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		6e-04
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		6e-04
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		7e-04
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		7e-04
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		7e-04
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		7e-04
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		7e-04
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		7e-04
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		8e-04
3b2t_A	311	Structure Of Phosphotransferase Length = 311		8e-04
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		9e-04
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		9e-04
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-04
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		9e-04
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		9e-04
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		9e-04
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		9e-04
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		9e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 66.6 bits (161), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
Query: 3   AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
           A + DF +AKL+  +D  +       TIG++APEY   G+ S   DV+ +G+ML+E  TG
Sbjct: 181 AVVGDFGLAKLMDYKDXHVXXA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG 239
Query: 63  KKPTD--EIFN-EEMTLKHWVNDWLPISTME-VVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
           ++  D   + N +++ L  WV   L    +E +VDV+L          K++ V  +  +A
Sbjct: 240 QRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGN------YKDEEVEQLIQVA 293
Query: 119 MACTVESPEQRINAKEIVTKL 139
           + CT  SP +R    E+V  L
Sbjct: 294 LLCTQSSPMERPKMSEVVRML 314

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 11/141 (7%)
Query: 3   AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
           A + DF +AKL+  +D  +        IG++APEY   G+ S   DV+ +G+ML+E  TG
Sbjct: 173 AVVGDFGLAKLMDYKDXHVXXA-VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG 231
Query: 63  KKPTDEIF---NEEMTLKHWVNDWLPISTME-VVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
           ++  D      ++++ L  WV   L    +E +VDV+L          K++ V  +  +A
Sbjct: 232 QRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGN------YKDEEVEQLIQVA 285
Query: 119 MACTVESPEQRINAKEIVTKL 139
           + CT  SP +R    E+V  L
Sbjct: 286 LLCTQSSPMERPKMSEVVRML 306

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            V  ++DF I+K  T  DQ+        T+GY+ PEY  +GR++   DVYSFG++L E  
Sbjct: 176 FVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
Query: 61  TGKKPTDEIFNEEMT-LKHWVNDWLPISTME-VVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
             +    +    EM  L  W  +      +E +VD NL  +     +  E    F  + A
Sbjct: 236 CARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK-----IRPESLRKF-GDTA 289
Query: 119 MACTVESPEQRINAKEIVTKL---LKIRDSLL 147
           + C   S E R +  +++ KL   L++++S++
Sbjct: 290 VKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 11/152 (7%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            V  ++DF I+K  T   Q+        T+GY+ PEY  +GR++   DVYSFG++L E  
Sbjct: 176 FVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
Query: 61  TGKKPTDEIFNEEMT-LKHWVNDWLPISTME-VVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
             +    +    EM  L  W  +      +E +VD NL  +     +  E    F  + A
Sbjct: 236 CARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK-----IRPESLRKF-GDTA 289
Query: 119 MACTVESPEQRINAKEIVTKL---LKIRDSLL 147
           + C   S E R +  +++ KL   L++++S++
Sbjct: 290 VKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 7   DFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
           DF IA+ +     S+TQT   + T  Y++PE  R   V A  DVYS G +L E  TG+ P
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 66  TDEIFNEEMTLKHWVNDWLPIST 88
                 + +  +H   D +P S 
Sbjct: 219 FTGDSPDSVAYQHVREDPIPPSA 241

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 21/136 (15%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           ++  + DF +++ +   D       T+  I +M PE     + +   DV+SFG++L E F
Sbjct: 170 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIF 229
Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           T GK+P                 W  +S  EV++   ++Q  +       C   V+++ +
Sbjct: 230 TYGKQP-----------------WFQLSNTEVIEC--ITQGRV-LERPRVCPKEVYDVML 269
Query: 120 ACTVESPEQRINAKEI 135
            C    P+QR+N KEI
Sbjct: 270 GCWQREPQQRLNIKEI 285

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 7   DFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
           DF IA+ +     S+TQT   + T  Y++PE  R   V A  DVYS G +L E  TG+ P
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 66  TDEIFNEEMTLKHWVNDWLPIST 88
                   +  +H   D +P S 
Sbjct: 219 FTGDSPVSVAYQHVREDPIPPSA 241

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 7   DFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
           DF IA+ +     S+TQT   + T  Y++PE  R   V A  DVYS G +L E  TG+ P
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 66  TDEIFNEEMTLKHWVNDWLPIST 88
                   +  +H   D +P S 
Sbjct: 219 FTGDSPVSVAYQHVREDPIPPSA 241

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 7   DFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
           DF IA+ +     S+TQT   + T  Y++PE  R   V A  DVYS G +L E  TG+ P
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 66  TDEIFNEEMTLKHWVNDWLPIST 88
                   +  +H   D +P S 
Sbjct: 219 FTGDSPVSVAYQHVREDPIPPSA 241

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 7   DFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
           DF IA+ +     S+TQT   + T  Y++PE  R   V A  DVYS G +L E  TG+ P
Sbjct: 176 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
Query: 66  TDEIFNEEMTLKHWVNDWLPIST 88
                   +  +H   D +P S 
Sbjct: 236 FTGDSPVSVAYQHVREDPIPPSA 258

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 3   AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
           A +SDF +A+      Q++  ++ + T  YMAPE  R G ++   D+YSFG++L+E  TG
Sbjct: 172 AKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG 230
Query: 63  KKPTDE 68
               DE
Sbjct: 231 LPAVDE 236

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 3   AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
           A +SDF +A+      Q++   + + T  YMAPE  R G ++   D+YSFG++L+E  TG
Sbjct: 172 AKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG 230
Query: 63  KKPTDE 68
               DE
Sbjct: 231 LPAVDE 236

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 7   DFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
           DF IA+ +     S+ QT   + T  Y++PE  R   V A  DVYS G +L E  TG+ P
Sbjct: 159 DFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 66  TDEIFNEEMTLKHWVNDWLPIST 88
                   +  +H   D +P S 
Sbjct: 219 FTGDSPVSVAYQHVREDPIPPSA 241

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           +V  + DF +++ +   D      +T+  I +M PE     + +   DV+SFG++L E F
Sbjct: 166 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 225
Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           T GK+P                 W  +S  E +D     +E         C   V+ +  
Sbjct: 226 TYGKQP-----------------WYQLSNTEAIDCITQGRE---LERPRACPPEVYAIMR 265
Query: 120 ACTVESPEQRINAKEIVTKL 139
            C    P+QR + K++  +L
Sbjct: 266 GCWQREPQQRHSIKDVHARL 285

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           +V  + DF +++ +   D      +T+  I +M PE     + +   DV+SFG++L E F
Sbjct: 172 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 231
Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           T GK+P                 W  +S  E +D     +E         C   V+ +  
Sbjct: 232 TYGKQP-----------------WYQLSNTEAIDCITQGRE---LERPRACPPEVYAIMR 271
Query: 120 ACTVESPEQRINAKEIVTKL 139
            C    P+QR + K++  +L
Sbjct: 272 GCWQREPQQRHSIKDVHARL 291

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 3   AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
           A +SDF +A+      Q +   + + T  YMAPE  R G ++   D+YSFG++L+E  TG
Sbjct: 166 AKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG 224
Query: 63  KKPTDE 68
               DE
Sbjct: 225 LPAVDE 230

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           +V  + DF +++ +   D      +T+  I +M PE     + +   DV+SFG++L E F
Sbjct: 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 254
Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           T GK+P                 W  +S  E +D     +E         C   V+ +  
Sbjct: 255 TYGKQP-----------------WYQLSNTEAIDCITQGRE---LERPRACPPEVYAIMR 294
Query: 120 ACTVESPEQRINAKEIVTKL 139
            C    P+QR + K++  +L
Sbjct: 295 GCWQREPQQRHSIKDVHARL 314

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
             A +SDF +A+      Q +  ++ + T  Y APE  R G ++   D+YSFG++L+E  
Sbjct: 161 FTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEII 219
Query: 61  TGKKPTDE 68
           TG    DE
Sbjct: 220 TGLPAVDE 227

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 58/143 (40%), Gaps = 21/143 (14%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  +SDF +++       + +       + + APE    GR S+  DV+SFGI+L ETF+
Sbjct: 251 VLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            G  P   + N++              T E V+      +       E C   VF L   
Sbjct: 311 LGASPYPNLSNQQ--------------TREFVE------KGGRLPCPELCPDAVFRLMEQ 350
Query: 121 CTVESPEQRINAKEIVTKLLKIR 143
           C    P QR +   I  +L  IR
Sbjct: 351 CWAYEPGQRPSFSTIYQELQSIR 373

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 7   DFSIAKLLTGEDQSMTQT-QTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
           DF IAK L+  + S+TQT   L T+ Y +PE  +        D+YS GI+L E   G+ P
Sbjct: 154 DFGIAKALS--ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
Query: 66  TDEIFNEE----MTLKHWVNDWLPISTMEV 91
               FN E    + +KH + D +P  T +V
Sbjct: 212 ----FNGETAVSIAIKH-IQDSVPNVTTDV 236

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 58/143 (40%), Gaps = 21/143 (14%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  +SDF +++       + +       + + APE    GR S+  DV+SFGI+L ETF+
Sbjct: 251 VLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            G  P   + N++              T E V+      +       E C   VF L   
Sbjct: 311 LGASPYPNLSNQQ--------------TREFVE------KGGRLPCPELCPDAVFRLMEQ 350
Query: 121 CTVESPEQRINAKEIVTKLLKIR 143
           C    P QR +   I  +L  IR
Sbjct: 351 CWAYEPGQRPSFSTIYQELQSIR 373

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           +   +SDF + + +  +DQ ++   T   + + APE     + S+  DV++FGI++ E F
Sbjct: 141 LCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVF 199
Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVS-FVFNLA 118
           + GK P D   N E+ LK                   +SQ   H + +    S  ++ + 
Sbjct: 200 SLGKMPYDLYTNSEVVLK-------------------VSQG--HRLYRPHLASDTIYQIM 238
Query: 119 MACTVESPEQRINAKEIVTKLLKIRD 144
            +C  E PE+R   +++++ +  +R+
Sbjct: 239 YSCWHELPEKRPTFQQLLSSIEPLRE 264

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 21/136 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           +SD  + + +   D       +L  I +MAPE    G+ S + D++S+G++L E F+ G 
Sbjct: 169 ISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 228
Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
           +P     N+++                   V ++    +     + C ++V+ L + C  
Sbjct: 229 QPYCGYSNQDV-------------------VEMIRNRQV-LPCPDDCPAWVYALMIECWN 268
Query: 124 ESPEQRINAKEIVTKL 139
           E P +R   K+I ++L
Sbjct: 269 EFPSRRPRFKDIHSRL 284

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 21/136 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           +SD  + + +   D       +L  I +MAPE    G+ S + D++S+G++L E F+ G 
Sbjct: 186 ISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 245
Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
           +P     N+++                   V ++    +     + C ++V+ L + C  
Sbjct: 246 QPYCGYSNQDV-------------------VEMIRNRQV-LPCPDDCPAWVYALMIECWN 285
Query: 124 ESPEQRINAKEIVTKL 139
           E P +R   K+I ++L
Sbjct: 286 EFPSRRPRFKDIHSRL 301

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           ++  + DF +++ +   D       T+  I +M PE     + +   DV+S G++L E F
Sbjct: 165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIF 224
Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           T GK+P                 W  +S  EV++   ++Q  +       C   V+ L +
Sbjct: 225 TYGKQP-----------------WYQLSNNEVIEC--ITQGRV-LQRPRTCPQEVYELML 264
Query: 120 ACTVESPEQRINAKEIVTKL 139
            C    P  R N K I T L
Sbjct: 265 GCWQREPHMRKNIKGIHTLL 284

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 25/151 (16%)
Query: 1   MVAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  +SDF ++++L  + ++  T +     I + APE     + ++  DV+SFGI++ E 
Sbjct: 184 LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEV 243
Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
            T G++P  E+ N E+     +ND   + T                     C S ++ L 
Sbjct: 244 MTYGERPYWELSNHEVMKA--INDGFRLPT------------------PMDCPSAIYQLM 283
Query: 119 MACTVESPEQRINAKEIVT---KLLKIRDSL 146
           M C  +   +R    +IV+   KL++  DSL
Sbjct: 284 MQCWQQERARRPKFADIVSILDKLIRAPDSL 314

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
           +V  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 148 LVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 205
Query: 59  TFTGKKPTDEIFNEEM 74
           T  G+ P   + N E+
Sbjct: 206 TTKGRVPYPGMVNREV 221

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
           +V  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 144 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 201
Query: 59  TFTGKKPTDEIFNEEM 74
           T  G+ P   + N E+
Sbjct: 202 TTKGRVPYPGMVNREV 217

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
           +V  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 141 LVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 198
Query: 59  TFTGKKPTDEIFNEEM 74
           T  G+ P   + N E+
Sbjct: 199 TTKGRVPYPGMVNREV 214

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
           +V  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 140 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 197
Query: 59  TFTGKKPTDEIFNEEM 74
           T  G+ P   + N E+
Sbjct: 198 TTKGRVPYPGMVNREV 213

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
           +V  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 148 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 205
Query: 59  TFTGKKPTDEIFNEEM 74
           T  G+ P   + N E+
Sbjct: 206 TTKGRVPYPGMVNREV 221

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
           +V  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 142 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 199
Query: 59  TFTGKKPTDEIFNEEM 74
           T  G+ P   + N E+
Sbjct: 200 TTKGRVPYPGMVNREV 215

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
           +V  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 151 LVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 59  TFTGKKPTDEIFNEEM 74
           T  G+ P   + N E+
Sbjct: 209 TTKGRVPYPGMVNREV 224

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
           +V  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 317 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 59  TFTGKKPTDEIFNEEM 74
           T  G+ P   + N E+
Sbjct: 375 TTKGRVPYPGMVNREV 390

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
           +V  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 151 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 59  TFTGKKPTDEIFNEEM 74
           T  G+ P   + N E+
Sbjct: 209 TTKGRVPYPGMVNREV 224

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
           +V  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 151 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 59  TFTGKKPTDEIFNEEM 74
           T  G+ P   + N E+
Sbjct: 209 TTKGRVPYPGMVNREV 224

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
           +V  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 151 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 59  TFTGKKPTDEIFNEEM 74
           T  G+ P   + N E+
Sbjct: 209 TTKGRVPYPGMVNREV 224

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
           +V  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 151 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 59  TFTGKKPTDEIFNEEM 74
           T  G+ P   + N E+
Sbjct: 209 TTKGRVPYPGMVNREV 224

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
           +V  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 317 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 59  TFTGKKPTDEIFNEEM 74
           T  G+ P   + N E+
Sbjct: 375 TTKGRVPYPGMVNREV 390

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
           +V  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 317 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 59  TFTGKKPTDEIFNEEM 74
           T  G+ P   + N E+
Sbjct: 375 TTKGRVPYPGMVNREV 390

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
           +V  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 151 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 59  TFTGKKPTDEIFNEEM 74
           T  G+ P   + N E+
Sbjct: 209 TTKGRVPYPGMVNREV 224

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
           +V  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 151 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 59  TFTGKKPTDEIFNEEM 74
           T  G+ P   + N E+
Sbjct: 209 TTKGRVPYPGMVNREV 224

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 22/147 (14%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  +SDF + + +  +DQ  + T T   + + +PE     R S+  DV+SFG+++ E F+
Sbjct: 142 VIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200
Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            GK P +   N E+     V D   IST                       + V+ +   
Sbjct: 201 EGKIPYENRSNSEV-----VED---IST------------GFRLYKPRLASTHVYQIMNH 240
Query: 121 CTVESPEQRINAKEIVTKLLKIRDSLL 147
           C  E PE R     ++ +L +I +S L
Sbjct: 241 CWRERPEDRPAFSRLLRQLAEIAESGL 267

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
           +V  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 151 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 59  TFTGKKPTDEIFNEEM 74
           T  G+ P   + N E+
Sbjct: 209 TTKGRVPYPGMVNREV 224

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 22/147 (14%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  +SDF + + +  +DQ  + T T   + + +PE     R S+  DV+SFG+++ E F+
Sbjct: 144 VIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 202
Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            GK P +   N E+     V D   IST                       + V+ +   
Sbjct: 203 EGKIPYENRSNSEV-----VED---IST------------GFRLYKPRLASTHVYQIMNH 242
Query: 121 CTVESPEQRINAKEIVTKLLKIRDSLL 147
           C  E PE R     ++ +L +I +S L
Sbjct: 243 CWRERPEDRPAFSRLLRQLAEIAESGL 269

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 24/131 (18%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  ++DF +A+++  ED   T  +     I + APE    G  +   DV+SFGI+LME 
Sbjct: 148 LVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 205
Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
            T G+ P   + N E+           I  +E                 E C   ++N+ 
Sbjct: 206 VTYGRIPYPGMSNPEV-----------IRALE---------RGYRMPRPENCPEELYNIM 245
Query: 119 MACTVESPEQR 129
           M C    PE+R
Sbjct: 246 MRCWKNRPEER 256

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3   AHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           A +SDF ++K L   E+    QT     + + APE     + S+  DV+SFG+++ E F+
Sbjct: 150 AKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
Query: 62  -GKKPTDEIFNEEMT 75
            G+KP   +   E+T
Sbjct: 210 YGQKPYRGMKGSEVT 224

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
           +V  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 400 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 457
Query: 59  TFTGKKPTDEIFNEEM 74
           T  G+ P   + N E+
Sbjct: 458 TTKGRVPYPGMVNREV 473

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 22/147 (14%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  +SDF + + +  +DQ  + T T   + + +PE     R S+  DV+SFG+++ E F+
Sbjct: 161 VIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 219
Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            GK P +   N E+     V D   IST                       + V+ +   
Sbjct: 220 EGKIPYENRSNSEV-----VED---IST------------GFRLYKPRLASTHVYQIMNH 259
Query: 121 CTVESPEQRINAKEIVTKLLKIRDSLL 147
           C  E PE R     ++ +L +I +S L
Sbjct: 260 CWKERPEDRPAFSRLLRQLAEIAESGL 286

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 22/147 (14%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  +SDF + + +  +DQ  + T T   + + +PE     R S+  DV+SFG+++ E F+
Sbjct: 139 VIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 197
Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            GK P +   N E+     V D   IST                       + V+ +   
Sbjct: 198 EGKIPYENRSNSEV-----VED---IST------------GFRLYKPRLASTHVYQIMNH 237
Query: 121 CTVESPEQRINAKEIVTKLLKIRDSLL 147
           C  E PE R     ++ +L +I +S L
Sbjct: 238 CWKERPEDRPAFSRLLRQLAEIAESGL 264

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3   AHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           A +SDF ++K L   E+    QT     + + APE     + S+  DV+SFG+++ E F+
Sbjct: 146 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
Query: 62  -GKKPTDEIFNEEMT 75
            G+KP   +   E+T
Sbjct: 206 YGQKPYRGMKGSEVT 220

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 22/147 (14%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  +SDF + + +  +DQ  + T T   + + +PE     R S+  DV+SFG+++ E F+
Sbjct: 141 VIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            GK P +   N E+     V D   IST                       + V+ +   
Sbjct: 200 EGKIPYENRSNSEV-----VED---IST------------GFRLYKPRLASTHVYQIMNH 239
Query: 121 CTVESPEQRINAKEIVTKLLKIRDSLL 147
           C  E PE R     ++ +L +I +S L
Sbjct: 240 CWKERPEDRPAFSRLLRQLAEIAESGL 266

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           ++  ++DF +A+L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 142 LICKIADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 199
Query: 60  FT-GKKPTDEIFNEEM 74
            T G+ P   + N E+
Sbjct: 200 VTKGRVPYPGMNNREV 215

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3   AHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           A +SDF ++K L   E+    QT     + + APE     + S+  DV+SFG+++ E F+
Sbjct: 144 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
Query: 62  -GKKPTDEIFNEEMT 75
            G+KP   +   E+T
Sbjct: 204 YGQKPYRGMKGSEVT 218

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3   AHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           A +SDF ++K L   E+    QT     + + APE     + S+  DV+SFG+++ E F+
Sbjct: 150 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
Query: 62  -GKKPTDEIFNEEMT 75
            G+KP   +   E+T
Sbjct: 210 YGQKPYRGMKGSEVT 224

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           VA +SDF + K     + S TQ      + + APE  RE + S   DV+SFGI+L E ++
Sbjct: 140 VAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194
Query: 62  -GKKPTDEI 69
            G+ P   I
Sbjct: 195 FGRVPYPRI 203

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 24/131 (18%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  ++DF +A+++  ED   T  +     I + APE    G  +   DV+SFGI+LME 
Sbjct: 321 LVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 378
Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
            T G+ P   + N E+           I  +E                 E C   ++N+ 
Sbjct: 379 VTYGRIPYPGMSNPEV-----------IRALE---------RGYRMPRPENCPEELYNIM 418
Query: 119 MACTVESPEQR 129
           M C    PE+R
Sbjct: 419 MRCWKNRPEER 429

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3   AHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           A +SDF ++K L   E+    QT     + + APE     + S+  DV+SFG+++ E F+
Sbjct: 156 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
Query: 62  -GKKPTDEIFNEEMT 75
            G+KP   +   E+T
Sbjct: 216 YGQKPYRGMKGSEVT 230

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3   AHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           A +SDF ++K L   E+    QT     + + APE     + S+  DV+SFG+++ E F+
Sbjct: 166 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
Query: 62  -GKKPTDEIFNEEMT 75
            G+KP   +   E+T
Sbjct: 226 YGQKPYRGMKGSEVT 240

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3   AHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           A +SDF ++K L   E+    QT     + + APE     + S+  DV+SFG+++ E F+
Sbjct: 166 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
Query: 62  -GKKPTDEIFNEEMT 75
            G+KP   +   E+T
Sbjct: 226 YGQKPYRGMKGSEVT 240

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3   AHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           A +SDF ++K L   E+    QT     + + APE     + S+  DV+SFG+++ E F+
Sbjct: 164 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
Query: 62  -GKKPTDEIFNEEMT 75
            G+KP   +   E+T
Sbjct: 224 YGQKPYRGMKGSEVT 238

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           VA +SDF + K     + S TQ      + + APE  RE + S   DV+SFGI+L E ++
Sbjct: 155 VAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
Query: 62  -GKKPTDEI 69
            G+ P   I
Sbjct: 210 FGRVPYPRI 218

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           VA +SDF + K     + S TQ      + + APE  RE + S   DV+SFGI+L E ++
Sbjct: 327 VAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
Query: 62  -GKKPTDEI 69
            G+ P   I
Sbjct: 382 FGRVPYPRI 390

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
           +V  ++DF + +L+  ED   T  Q     I + APE    GR +   DV+SFGI+L E 
Sbjct: 318 LVCKVADFGLGRLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 375
Query: 59  TFTGKKPTDEIFNEEM 74
           T  G+ P   + N E+
Sbjct: 376 TTKGRVPYPGMVNREV 391

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  +SDF + + +  +DQ  + T T   + + +PE     R S+  DV+SFG+++ E F+
Sbjct: 141 VIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
Query: 62  -GKKPTDEIFNEEM 74
            GK P +   N E+
Sbjct: 200 EGKIPYENRSNSEV 213

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           VA +SDF + K     + S TQ      + + APE  RE   S   DV+SFGI+L E ++
Sbjct: 146 VAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
Query: 62  -GKKPTDEI 69
            G+ P   I
Sbjct: 201 FGRVPYPRI 209

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3   AHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           A +SDF ++K L   E+    QT     + + APE     + S+  DV+SFG+++ E F+
Sbjct: 508 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
Query: 62  -GKKPTDEIFNEEMT 75
            G+KP   +   E+T
Sbjct: 568 YGQKPYRGMKGSEVT 582

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3   AHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           A +SDF ++K L   E+    QT     + + APE     + S+  DV+SFG+++ E F+
Sbjct: 509 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
Query: 62  -GKKPTDEIFNEEMT 75
            G+KP   +   E+T
Sbjct: 569 YGQKPYRGMKGSEVT 583

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  +SDF +A++L  + ++   T+     I + +PE     + ++  DV+S+GI+L E 
Sbjct: 184 LVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
            + G++P  E+ N+++              ++ VD      E         C + ++ L 
Sbjct: 244 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 283
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
           + C  +    R   ++IV+    I D L+RN G   I      R SNL
Sbjct: 284 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 26/145 (17%)
Query: 1   MVAH-----LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
           MVAH     + DF + + +   D      + L  + +MAPE  ++G  + + D++SFG++
Sbjct: 159 MVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 218
Query: 56  LME-TFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFV 114
           L E T   ++P   + NE++ LK             V+D   L Q D        C   V
Sbjct: 219 LWEITSLAEQPYQGLSNEQV-LKF------------VMDGGYLDQPD-------NCPERV 258
Query: 115 FNLAMACTVESPEQRINAKEIVTKL 139
            +L   C   +P+ R    EIV  L
Sbjct: 259 TDLMRMCWQFNPKMRPTFLEIVNLL 283

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 26/145 (17%)
Query: 1   MVAH-----LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
           MVAH     + DF + + +   D      + L  + +MAPE  ++G  + + D++SFG++
Sbjct: 162 MVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 221
Query: 56  LME-TFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFV 114
           L E T   ++P   + NE++ LK             V+D   L Q D        C   V
Sbjct: 222 LWEITSLAEQPYQGLSNEQV-LKF------------VMDGGYLDQPD-------NCPERV 261
Query: 115 FNLAMACTVESPEQRINAKEIVTKL 139
            +L   C   +P+ R    EIV  L
Sbjct: 262 TDLMRMCWQFNPKMRPTFLEIVNLL 286

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 1   MVAH-----LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
           MVAH     + DF + + +   D      + L  + +MAPE  ++G  + + D++SFG++
Sbjct: 162 MVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 221
Query: 56  LME-TFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFV 114
           L E T   ++P   + NE++ LK             V+D   L Q D        C   V
Sbjct: 222 LWEITSLAEQPYQGLSNEQV-LKF------------VMDGGYLDQPD-------NCPERV 261
Query: 115 FNLAMACTVESPEQRINAKEIVTKL 139
            +L   C   +P  R    EIV  L
Sbjct: 262 TDLMRMCWQFNPNMRPTFLEIVNLL 286

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 64/159 (40%), Gaps = 26/159 (16%)
Query: 3   AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
           A L+DF +A  LT  D    +   + T  +MAPE  +E   +   D++S GI  +E   G
Sbjct: 164 AKLADFGVAGQLT--DXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEG 221
Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
           K P  +I               P+  + ++  N        F   E       +    C 
Sbjct: 222 KPPYADIH--------------PMRAIFMIPTNPPPT----FRKPELWSDNFTDFVKQCL 263
Query: 123 VESPEQRINAKEIVTKLLKIRDSLLRNVGGRCIRQSNLN 161
           V+SPEQR  A ++      ++   +R+  G  I +  +N
Sbjct: 264 VKSPEQRATATQL------LQHPFVRSAKGVSILRDLIN 296

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 26/145 (17%)
Query: 1   MVAH-----LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
           MVAH     + DF + + +   D      + L  + +MAPE  ++G  + + D++SFG++
Sbjct: 162 MVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 221
Query: 56  LME-TFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFV 114
           L E T   ++P   + NE++ LK             V+D   L Q D        C   V
Sbjct: 222 LWEITSLAEQPYQGLSNEQV-LKF------------VMDGGYLDQPD-------NCPERV 261
Query: 115 FNLAMACTVESPEQRINAKEIVTKL 139
            +L   C   +P+ R    EIV  L
Sbjct: 262 TDLMRMCWQFNPKMRPTFLEIVNLL 286

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 22/152 (14%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           +VA  +   I    T  D     T    +  +MAPE       S   DV+S+GI+L E  
Sbjct: 138 LVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVI 197
Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
           T +KP DEI      +   V++     T   +  NL                 + +L   
Sbjct: 198 TRRKPFDEIGGPAFRIMWAVHN----GTRPPLIKNLPKP--------------IESLMTR 239
Query: 121 CTVESPEQRINAKEIVTKLLKIRDSLLRNVGG 152
           C  + P QR + +EIV    KI   L+R   G
Sbjct: 240 CWSKDPSQRPSMEEIV----KIMTHLMRYFPG 267

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  +SDF ++++L  + ++   T+     I + +PE     + ++  DV+S+GI+L E 
Sbjct: 182 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 241
Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
            + G++P  E+ N+++              ++ VD      E         C + ++ L 
Sbjct: 242 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 281
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
           + C  +    R   ++IV+    I D L+RN G   I      R SNL
Sbjct: 282 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 325

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 28/153 (18%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGIMLM 57
           +V  +SDF +++ L  +    T T  L     I + APE  +  + ++  DV+S+GI++ 
Sbjct: 146 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMW 205
Query: 58  ETFT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFN 116
           E  + G++P  ++ N+++                   +N + Q D        C S +  
Sbjct: 206 EVMSYGERPYWDMTNQDV-------------------INAIEQ-DYRLPPPMDCPSALHQ 245
Query: 117 LAMACTVESPEQRINAKEIVTKLLKIRDSLLRN 149
           L + C  +    R    +IV  L    D ++RN
Sbjct: 246 LMLDCWQKDRNHRPKFGQIVNTL----DKMIRN 274

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           +  ++DF +A+    E    T+        +MAPE  R    S   DV+S+G++L E  T
Sbjct: 154 ILKITDFGLAR----EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT 209
Query: 62  GKKP 65
           G+ P
Sbjct: 210 GEVP 213

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 22/152 (14%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           +VA  +   I    T  D     T    +  +MAPE       S   DV+S+GI+L E  
Sbjct: 139 LVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVI 198
Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
           T +KP DEI      +   V++     T   +  NL                 + +L   
Sbjct: 199 TRRKPFDEIGGPAFRIMWAVHN----GTRPPLIKNLPKP--------------IESLMTR 240
Query: 121 CTVESPEQRINAKEIVTKLLKIRDSLLRNVGG 152
           C  + P QR + +EIV    KI   L+R   G
Sbjct: 241 CWSKDPSQRPSMEEIV----KIMTHLMRYFPG 268

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L E  T   
Sbjct: 157 VADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 215
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
                               P   +++  V  L ++D      E C   V+ L  AC   
Sbjct: 216 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 256
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 257 NPSDRPSFAEI 267

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  +SDF ++++L  + ++   T+     I + +PE     + ++  DV+S+GI+L E 
Sbjct: 155 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 214
Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
            + G++P  E+ N+++              ++ VD      E         C + ++ L 
Sbjct: 215 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 254
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
           + C  +    R   ++IV+    I D L+RN G   I      R SNL
Sbjct: 255 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 298

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  +SDF ++++L  + ++   T+     I + +PE     + ++  DV+S+GI+L E 
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
            + G++P  E+ N+++              ++ VD      E         C + ++ L 
Sbjct: 244 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 283
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
           + C  +    R   ++IV+    I D L+RN G   I      R SNL
Sbjct: 284 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  +SDF ++++L  + ++   T+     I + +PE     + ++  DV+S+GI+L E 
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
            + G++P  E+ N+++              ++ VD      E         C + ++ L 
Sbjct: 244 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 283
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
           + C  +    R   ++IV+    I D L+RN G   I      R SNL
Sbjct: 284 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  +SDF ++++L  + ++   T+     I + +PE     + ++  DV+S+GI+L E 
Sbjct: 155 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 214
Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
            + G++P  E+ N+++              ++ VD      E         C + ++ L 
Sbjct: 215 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 254
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
           + C  +    R   ++IV+    I D L+RN G   I      R SNL
Sbjct: 255 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 298

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  +SDF ++++L  + ++   T+     I + +PE     + ++  DV+S+GI+L E 
Sbjct: 172 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 231
Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
            + G++P  E+ N+++              ++ VD      E         C + ++ L 
Sbjct: 232 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 271
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
           + C  +    R   ++IV+    I D L+RN G   I      R SNL
Sbjct: 272 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 315

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L E  T   
Sbjct: 153 VADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 211
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
                               P   +++  V  L ++D      E C   V+ L  AC   
Sbjct: 212 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 252
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 253 NPSDRPSFAEI 263

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  +SDF ++++L  + ++   T+     I + +PE     + ++  DV+S+GI+L E 
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
            + G++P  E+ N+++              ++ VD      E         C + ++ L 
Sbjct: 244 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 283
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
           + C  +    R   ++IV+    I D L+RN G   I      R SNL
Sbjct: 284 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  +SDF ++++L  + ++   T+     I + +PE     + ++  DV+S+GI+L E 
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
            + G++P  E+ N+++              ++ VD      E         C + ++ L 
Sbjct: 244 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 283
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
           + C  +    R   ++IV+    I D L+RN G   I      R SNL
Sbjct: 284 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  +SDF ++++L  + ++   T+     I + +PE     + ++  DV+S+GI+L E 
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
            + G++P  E+ N+++              ++ VD      E         C + ++ L 
Sbjct: 244 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 283
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
           + C  +    R   ++IV+    I D L+RN G   I      R SNL
Sbjct: 284 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  +SDF ++++L  + ++   T+     I + +PE     + ++  DV+S+GI+L E 
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
            + G++P  E+ N+++              ++ VD      E         C + ++ L 
Sbjct: 244 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 283
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
           + C  +    R   ++IV+    I D L+RN G   I      R SNL
Sbjct: 284 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 26/145 (17%)
Query: 1   MVAH-----LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
           MVAH     + DF + + +   D      + L  + +MAPE  ++G  + + D++SFG++
Sbjct: 161 MVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 220
Query: 56  LME-TFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFV 114
           L E T   ++P   + NE++ LK             V+D   L Q D        C   V
Sbjct: 221 LWEITSLAEQPYQGLSNEQV-LKF------------VMDGGYLDQPD-------NCPERV 260
Query: 115 FNLAMACTVESPEQRINAKEIVTKL 139
            +L   C   +P+ R    EIV  L
Sbjct: 261 TDLMRMCWQFNPKMRPTFLEIVNLL 285

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  +SDF ++++L  + ++   T+     I + +PE     + ++  DV+S+GI+L E 
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
            + G++P  E+ N+++              ++ VD      E         C + ++ L 
Sbjct: 244 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 283
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
           + C  +    R   ++IV+    I D L+RN G   I      R SNL
Sbjct: 284 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 1   MVAH-----LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
           MVAH     + DF + + +   D      + L  + +MAPE  ++G  + + D++SFG++
Sbjct: 162 MVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 221
Query: 56  LME-TFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFV 114
           L E T   ++P   + NE++ LK             V+D   L Q D        C   V
Sbjct: 222 LWEITSLAEQPYQGLSNEQV-LKF------------VMDGGYLDQPD-------NCPERV 261
Query: 115 FNLAMACTVESPEQRINAKEIVTKL 139
            +L   C   +P  R    EIV  L
Sbjct: 262 TDLMRMCWQFNPNMRPTFLEIVNLL 286

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 1   MVAH-----LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
           MVAH     + DF + + +   D      + L  + +MAPE  ++G  + + D++SFG++
Sbjct: 163 MVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 222
Query: 56  LME-TFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFV 114
           L E T   ++P   + NE++ LK             V+D   L Q D        C   V
Sbjct: 223 LWEITSLAEQPYQGLSNEQV-LKF------------VMDGGYLDQPD-------NCPERV 262
Query: 115 FNLAMACTVESPEQRINAKEIVTKL 139
            +L   C   +P  R    EIV  L
Sbjct: 263 TDLMRMCWQFNPNMRPTFLEIVNLL 287

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 28/153 (18%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGIMLM 57
           +V  +SDF +++ L  +    T T  L     I + APE  +  + ++  DV+S+GI++ 
Sbjct: 172 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMW 231
Query: 58  ETFT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFN 116
           E  + G++P  ++ N+++                   +N + Q D        C S +  
Sbjct: 232 EVMSYGERPYWDMTNQDV-------------------INAIEQ-DYRLPPPMDCPSALHQ 271
Query: 117 LAMACTVESPEQRINAKEIVTKLLKIRDSLLRN 149
           L + C  +    R    +IV  L    D ++RN
Sbjct: 272 LMLDCWQKDRNHRPKFGQIVNTL----DKMIRN 300

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L E  T   
Sbjct: 157 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 215
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
                               P   +++  V  L ++D      E C   V+ L  AC   
Sbjct: 216 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 256
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 257 NPSDRPSFAEI 267

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L E  T   
Sbjct: 152 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
                               P   +++  V  L ++D      E C   V+ L  AC   
Sbjct: 211 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 251
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 252 NPSDRPSFAEI 262

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L E  T   
Sbjct: 156 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 214
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
                               P   +++  V  L ++D      E C   V+ L  AC   
Sbjct: 215 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 255
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 256 NPSDRPSFAEI 266

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L E  T   
Sbjct: 152 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
                               P   +++  V  L ++D      E C   V+ L  AC   
Sbjct: 211 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 251
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 252 NPSDRPSFAEI 262

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L E  T   
Sbjct: 157 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 215
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
                               P   +++  V  L ++D      E C   V+ L  AC   
Sbjct: 216 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 256
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 257 NPSDRPSFAEI 267

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L E  T   
Sbjct: 154 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 212
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
                               P   +++  V  L ++D      E C   V+ L  AC   
Sbjct: 213 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 253
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 254 NPSDRPSFAEI 264

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  +SDF + ++L  + ++   T+     I + +PE     + ++  DV+S+GI+L E 
Sbjct: 184 LVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
            + G++P  E+ N+++              ++ VD      E         C + ++ L 
Sbjct: 244 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 283
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
           + C  +    R   ++IV+    I D L+RN G   I      R SNL
Sbjct: 284 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L E  T   
Sbjct: 154 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 212
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
                               P   +++  V  L ++D      E C   V+ L  AC   
Sbjct: 213 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 253
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 254 NPSDRPSFAEI 264

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L E  T   
Sbjct: 152 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
                               P   +++  V  L ++D      E C   V+ L  AC   
Sbjct: 211 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 251
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 252 NPSDRPSFAEI 262

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L        
Sbjct: 398 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW------- 449
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
              EI    M+         P   +++  V  L ++D      E C   V+ L  AC   
Sbjct: 450 ---EIATYGMS---------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 497
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 498 NPSDRPSFAEI 508

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L E  T   
Sbjct: 165 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 223
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
                               P   +++  V  L ++D      E C   V+ L  AC   
Sbjct: 224 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 264
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 265 NPSDRPSFAEI 275

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L E  T   
Sbjct: 152 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
                               P   +++  V  L ++D      E C   V+ L  AC   
Sbjct: 211 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 251
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 252 NPSDRPSFAEI 262

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L        
Sbjct: 359 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW------- 410
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
              EI    M+         P   +++  V  L ++D      E C   V+ L  AC   
Sbjct: 411 ---EIATYGMS---------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 458
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 459 NPSDRPSFAEI 469

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L E  T   
Sbjct: 152 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
                               P   +++  V  L ++D      E C   V+ L  AC   
Sbjct: 211 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 251
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 252 NPSDRPSFAEI 262

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L E  T   
Sbjct: 157 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 215
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
                               P   +++  V  L ++D      E C   V+ L  AC   
Sbjct: 216 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 256
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 257 NPSDRPSFAEI 267

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L E  T   
Sbjct: 152 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
                               P   +++  V  L ++D      E C   V+ L  AC   
Sbjct: 211 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 251
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 252 NPSDRPSFAEI 262

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L E  T   
Sbjct: 157 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 215
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
                               P   +++  V  L ++D      E C   V+ L  AC   
Sbjct: 216 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 256
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 257 NPSDRPSFAEI 267

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           + DF + + +   D      + L  + +M+PE  ++G  +   DV+SFG++L E  T  +
Sbjct: 173 IGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 232
Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
           +P   + NE++ L+             V++  LL + D        C   +F L   C  
Sbjct: 233 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLFELMRMCWQ 272
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
            +P+ R +  EI++ + +  +   R V
Sbjct: 273 YNPKMRPSFLEIISSIKEEMEPGFREV 299

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 3   AHLSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           A+L DF IA   T  D+ +TQ   T+ T+ Y APE   E   +   D+Y+   +L E  T
Sbjct: 173 AYLVDFGIASATT--DEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLT 230
Query: 62  GKKP 65
           G  P
Sbjct: 231 GSPP 234

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 20/134 (14%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           +  ++DF +++L+TG D           I + APE     + S   DV++FG++L E  T
Sbjct: 150 LVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
Query: 62  GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMAC 121
                                  P   +++  V  L ++D      E C   V+ L  AC
Sbjct: 209 YGMS-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 249
Query: 122 TVESPEQRINAKEI 135
              +P  R +  EI
Sbjct: 250 WQWNPSDRPSFAEI 263

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L E  T   
Sbjct: 154 VADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 212
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
                               P   +++  V  L ++D      E C   V+ L  AC   
Sbjct: 213 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 253
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 254 NPSDRPSFAEI 264

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L E  T   
Sbjct: 150 VADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 208
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
                               P   ++   V  L ++D      E C   V+ L  AC   
Sbjct: 209 S-------------------PYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 249
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 250 NPSDRPSFAEI 260

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L E  T   
Sbjct: 150 VADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 208
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
                               P   ++   V  L ++D      E C   V+ L  AC   
Sbjct: 209 S-------------------PYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 249
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 250 NPSDRPSFAEI 260

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 29/144 (20%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-ANG----------DVYSFG 53
           L DF IA  +  +  S+ +   + T+ YM PE  ++   S  NG          DV+S G
Sbjct: 151 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 210
Query: 54  IMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF 113
            +L     GK P  +I N+   L H + D  P   +E  D+    ++D+  V K      
Sbjct: 211 CILYYMTYGKTPFQQIINQISKL-HAIID--PNHEIEFPDI---PEKDLQDVLK------ 258
Query: 114 VFNLAMACTVESPEQRINAKEIVT 137
                  C    P+QRI+  E++ 
Sbjct: 259 ------CCLKRDPKQRISIPELLA 276

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           + DF + + +   D      + L  + +M+PE  ++G  +   DV+SFG++L E  T  +
Sbjct: 166 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 225
Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
           +P   + NE++ L+             V++  LL + D        C   +F L   C  
Sbjct: 226 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLFELMRMCWQ 265
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
            +P+ R +  EI++ + +  +   R V
Sbjct: 266 YNPKMRPSFLEIISSIKEEMEPGFREV 292

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           + DF + + +   D      + L  + +M+PE  ++G  +   DV+SFG++L E  T  +
Sbjct: 173 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 232
Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
           +P   + NE++ L+             V++  LL + D        C   +F L   C  
Sbjct: 233 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLFELMRMCWQ 272
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
            +P+ R +  EI++ + +  +   R V
Sbjct: 273 YNPKMRPSFLEIISSIKEEMEPGFREV 299

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
           ++DF +A+L+  ED   T  +     I + APE    G  +   DV+SFGI+L E  T G
Sbjct: 152 IADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 209
Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
           + P   + N E+           I  +E              V  + C   ++ L   C 
Sbjct: 210 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 249
Query: 123 VESPEQR 129
            E PE R
Sbjct: 250 KERPEDR 256

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           + DF + + +   D      + L  + +M+PE  ++G  +   DV+SFG++L E  T  +
Sbjct: 201 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 260
Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
           +P   + NE++ L+             V++  LL + D        C   +F L   C  
Sbjct: 261 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLFELMRMCWQ 300
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
            +P+ R +  EI++ + +  +   R V
Sbjct: 301 YNPKMRPSFLEIISSIKEEMEPGFREV 327

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
           ++DF +A+L+  ED   T  +     I + APE    G  +   DV+SFGI+L E  T G
Sbjct: 150 IADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
           + P   + N E+           I  +E              V  + C   ++ L   C 
Sbjct: 208 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 247
Query: 123 VESPEQR 129
            E PE R
Sbjct: 248 KERPEDR 254

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLM 57
           +   + DF +A + +    S    Q   +I +MAPE  R   +   S   DVY+FGI+L 
Sbjct: 143 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 202
Query: 58  ETFTGKKPTDEIFNEEMTL 76
           E  TG+ P   I N +  +
Sbjct: 203 ELMTGQLPYSNINNRDQII 221

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
           ++DF +A+L+  ED   T  +     I + APE    G  +   DV+SFGI+L E  T G
Sbjct: 150 IADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
           + P   + N E+           I  +E              V  + C   ++ L   C 
Sbjct: 208 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 247
Query: 123 VESPEQR 129
            E PE R
Sbjct: 248 KERPEDR 254

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLM 57
           +   + DF +A + +    S    Q   +I +MAPE  R   +   S   DVY+FGI+L 
Sbjct: 141 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 200
Query: 58  ETFTGKKPTDEIFNEEMTL 76
           E  TG+ P   I N +  +
Sbjct: 201 ELMTGQLPYSNINNRDQII 219

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLM 57
           +   + DF +A + +    S    Q   +I +MAPE  R   +   S   DVY+FGI+L 
Sbjct: 141 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 200
Query: 58  ETFTGKKPTDEIFNEEMTL 76
           E  TG+ P   I N +  +
Sbjct: 201 ELMTGQLPYSNINNRDQII 219

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           + DF + + +   D      + L  + +M+PE  ++G  +   DV+SFG++L E  T  +
Sbjct: 169 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 228
Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
           +P   + NE++ L+             V++  LL + D        C   +F L   C  
Sbjct: 229 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLFELMRMCWQ 268
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
            +P+ R +  EI++ + +  +   R V
Sbjct: 269 YNPKMRPSFLEIISSIKEEMEPGFREV 295

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           + DF + + +   D      + L  + +M+PE  ++G  +   DV+SFG++L E  T  +
Sbjct: 172 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 231
Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
           +P   + NE++ L+             V++  LL + D        C   +F L   C  
Sbjct: 232 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLFELMRMCWQ 271
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
            +P+ R +  EI++ + +  +   R V
Sbjct: 272 YNPKMRPSFLEIISSIKEEMEPGFREV 298

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
           ++DF +A+L+  ED   T  +     I + APE    G  +   DV+SFGI+L E  T G
Sbjct: 151 IADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 208
Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
           + P   + N E+           I  +E              V  + C   ++ L   C 
Sbjct: 209 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 248
Query: 123 VESPEQR 129
            E PE R
Sbjct: 249 KERPEDR 255

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 29/144 (20%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-ANG----------DVYSFG 53
           L DF IA  +  +  S+ +   + T+ YM PE  ++   S  NG          DV+S G
Sbjct: 147 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 206
Query: 54  IMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF 113
            +L     GK P  +I N+   L H + D  P   +E  D+    ++D+  V K      
Sbjct: 207 CILYYMTYGKTPFQQIINQISKL-HAIID--PNHEIEFPDI---PEKDLQDVLK------ 254
Query: 114 VFNLAMACTVESPEQRINAKEIVT 137
                  C    P+QRI+  E++ 
Sbjct: 255 ------CCLKRDPKQRISIPELLA 272

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
           ++DF +A+L+  ED   T  +     I + APE    G  +   DV+SFGI+L E  T G
Sbjct: 156 IADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 213
Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
           + P   + N E+           I  +E              V  + C   ++ L   C 
Sbjct: 214 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 253
Query: 123 VESPEQR 129
            E PE R
Sbjct: 254 KERPEDR 260

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLM 57
           +   + DF +A + +    S    Q   ++ +MAPE  R       S   DVYS+GI+L 
Sbjct: 169 LTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLY 228
Query: 58  ETFTGKKPTDEIFNEEMTL 76
           E  TG+ P   I N +  +
Sbjct: 229 ELMTGELPYSHINNRDQII 247

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLM 57
           +   + DF +A + +    S    Q   +I +MAPE  R   +   S   DVY+FGI+L 
Sbjct: 146 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 205
Query: 58  ETFTGKKPTDEIFNEEMTL 76
           E  TG+ P   I N +  +
Sbjct: 206 ELMTGQLPYSNINNRDQII 224

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           + DF + + +   D      + L  + +M+PE  ++G  +   DV+SFG++L E  T  +
Sbjct: 170 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 229
Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
           +P   + NE++ L+             V++  LL + D        C   +F L   C  
Sbjct: 230 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLFELMRMCWQ 269
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
            +P+ R +  EI++ + +  +   R V
Sbjct: 270 YNPKMRPSFLEIISSIKEEMEPGFREV 296

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLM 57
           +   + DF +A + +    S    Q   +I +MAPE  R   +   S   DVY+FGI+L 
Sbjct: 146 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 205
Query: 58  ETFTGKKPTDEIFNEEMTL 76
           E  TG+ P   I N +  +
Sbjct: 206 ELMTGQLPYSNINNRDQII 224

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           + DF + + +   D      + L  + +M+PE  ++G  +   DV+SFG++L E  T  +
Sbjct: 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 238
Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
           +P   + NE++ L+             V++  LL + D        C   +F L   C  
Sbjct: 239 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLFELMRMCWQ 278
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
            +P+ R +  EI++ + +  +   R V
Sbjct: 279 YNPKMRPSFLEIISSIKEEMEPGFREV 305

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
           ++DF +A+L+  ED   T  +     I + APE    G  +   DV+SFGI+L E  T G
Sbjct: 155 IADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 212
Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
           + P   + N E+           I  +E              V  + C   ++ L   C 
Sbjct: 213 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 252
Query: 123 VESPEQR 129
            E PE R
Sbjct: 253 KERPEDR 259

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           + DF + + +   D      + L  + +M+PE  ++G  +   DV+SFG++L E  T  +
Sbjct: 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 238
Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
           +P   + NE++ L+             V++  LL + D        C   +F L   C  
Sbjct: 239 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLFELMRMCWQ 278
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
            +P+ R +  EI++ + +  +   R V
Sbjct: 279 YNPKMRPSFLEIISSIKEEMEPGFREV 305

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
           ++DF +A+L+  ED   T  +     I + APE    G  +   DV+SFGI+L E  T G
Sbjct: 150 IADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
           + P   + N E+           I  +E              V  + C   ++ L   C 
Sbjct: 208 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 247
Query: 123 VESPEQR 129
            E PE R
Sbjct: 248 KERPEDR 254

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           + DF + + +   D      + L  + +M+PE  ++G  +   DV+SFG++L E  T  +
Sbjct: 172 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 231
Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
           +P   + NE++ L+             V++  LL + D        C   +F L   C  
Sbjct: 232 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLFELMRMCWQ 271
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
            +P+ R +  EI++ + +  +   R V
Sbjct: 272 YNPKMRPSFLEIISSIKEEMEPGFREV 298

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
           ++DF +A+L+  ED   T  +     I + APE    G  +   DV+SFGI+L E  T G
Sbjct: 159 IADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 216
Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
           + P   + N E+           I  +E              V  + C   ++ L   C 
Sbjct: 217 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 256
Query: 123 VESPEQR 129
            E PE R
Sbjct: 257 KERPEDR 263

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
           ++DF +A+L+  ED   T  +     I + APE    G  +   DV+SFGI+L E  T G
Sbjct: 158 IADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 215
Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
           + P   + N E+           I  +E              V  + C   ++ L   C 
Sbjct: 216 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 255
Query: 123 VESPEQR 129
            E PE R
Sbjct: 256 KERPEDR 262

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
           ++DF +A+L+  ED   T  +     I + APE    G  +   DV+SFGI+L E  T G
Sbjct: 156 IADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 213
Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
           + P   + N E+           I  +E              V  + C   ++ L   C 
Sbjct: 214 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 253
Query: 123 VESPEQR 129
            E PE R
Sbjct: 254 KERPEDR 260

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLM 57
           +   + DF +A + +    S    Q   +I +MAPE  R   +   S   DVY+FGI+L 
Sbjct: 168 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 227
Query: 58  ETFTGKKPTDEIFNEEMTL 76
           E  TG+ P   I N +  +
Sbjct: 228 ELMTGQLPYSNINNRDQII 246

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 29/144 (20%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-ANG----------DVYSFG 53
           L DF IA  +  +  S+ +   + T+ YM PE  ++   S  NG          DV+S G
Sbjct: 167 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 226
Query: 54  IMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF 113
            +L     GK P  +I N+   L H + D  P   +E  D+    ++D+  V K      
Sbjct: 227 CILYYMTYGKTPFQQIINQISKL-HAIID--PNHEIEFPDI---PEKDLQDVLK------ 274
Query: 114 VFNLAMACTVESPEQRINAKEIVT 137
                  C    P+QRI+  E++ 
Sbjct: 275 ------CCLKRDPKQRISIPELLA 292

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
           ++DF +A+L+  ED   T  +     I + APE    G  +   DV+SFGI+L E  T G
Sbjct: 146 IADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 203
Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
           + P   + N E+           I  +E              V  + C   ++ L   C 
Sbjct: 204 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 243
Query: 123 VESPEQR 129
            E PE R
Sbjct: 244 KERPEDR 250

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
           ++DF +A+L+  ED   T  +     I + APE    G  +   DV+SFGI+L E  T G
Sbjct: 160 IADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 217
Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
           + P   + N E+           I  +E              V  + C   ++ L   C 
Sbjct: 218 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 257
Query: 123 VESPEQR 129
            E PE R
Sbjct: 258 KERPEDR 264

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           ++DF +A+LL G+++          I +MA E     + +   DV+S+G+ + E  T G 
Sbjct: 181 ITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGG 240
Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
           KP D I   E+       + LP   +  +DV ++
Sbjct: 241 KPYDGIPTREIPDLLEKGERLPQPPICTIDVYMV 274

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           ++DF +A+LL G+++          I +MA E     + +   DV+S+G+ + E  T G 
Sbjct: 158 ITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGG 217
Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
           KP D I   E+       + LP   +  +DV ++
Sbjct: 218 KPYDGIPTREIPDLLEKGERLPQPPICTIDVYMV 251

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
           ++DF +A+L+  ED   T  +     I + APE    G  +   DV+SFGI+L E  T G
Sbjct: 150 IADFGLARLI--EDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
           + P   + N E+           I  +E              V  + C   ++ L   C 
Sbjct: 208 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 247
Query: 123 VESPEQR 129
            E PE R
Sbjct: 248 KERPEDR 254

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLM 57
           +   + DF +A + +    S    Q   +I +MAPE  R   +   S   DVY+FGI+L 
Sbjct: 169 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 228
Query: 58  ETFTGKKPTDEIFNEEMTL 76
           E  TG+ P   I N +  +
Sbjct: 229 ELMTGQLPYSNINNRDQII 247

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 29/144 (20%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-ANG----------DVYSFG 53
           L DF IA  +  +  S+ +   + T+ YM PE  ++   S  NG          DV+S G
Sbjct: 148 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 207
Query: 54  IMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF 113
            +L     GK P  +I N+   L H + D  P   +E  D+    ++D+  V K      
Sbjct: 208 CILYYMTYGKTPFQQIINQISKL-HAIID--PNHEIEFPDI---PEKDLQDVLK------ 255
Query: 114 VFNLAMACTVESPEQRINAKEIVT 137
                  C    P+QRI+  E++ 
Sbjct: 256 ------CCLKRDPKQRISIPELLA 273

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
           ++DF +A+L+  ED   T  +     I + APE    G  +   DV+SFGI+L E  T G
Sbjct: 145 IADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 202
Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
           + P   + N E+           I  +E              V  + C   ++ L   C 
Sbjct: 203 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 242
Query: 123 VESPEQR 129
            E PE R
Sbjct: 243 KERPEDR 249

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  ++DF +A+ +   D     T     + +MAPE   +   +   DV+SFG+++ E FT
Sbjct: 195 VMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            G  P   I  EE+                      L +E         C + ++ +   
Sbjct: 255 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 294
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
           C    P QR   K++V  L +I
Sbjct: 295 CWHAVPSQRPTFKQLVEDLDRI 316

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  ++DF +A+ +   D     T     + +MAPE   +   +   DV+SFG+++ E FT
Sbjct: 195 VMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            G  P   I  EE+                      L +E         C + ++ +   
Sbjct: 255 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 294
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
           C    P QR   K++V  L +I
Sbjct: 295 CWHAVPSQRPTFKQLVEDLDRI 316

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 20/131 (15%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +++L+TG D           I + APE     + S   DV++FG++L E  T   
Sbjct: 150 VADFGLSRLMTG-DTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 208
Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
                               P   ++   V  L ++D      E C   V+ L  AC   
Sbjct: 209 S-------------------PYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 249
Query: 125 SPEQRINAKEI 135
           +P  R +  EI
Sbjct: 250 NPSDRPSFAEI 260

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 26/140 (18%)
Query: 3   AHLSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEY--GREGRVSANGDVYSFGIMLMET 59
           A ++DFS+++      QS+ + +  L    +MAPE     E   +   D YSF ++L   
Sbjct: 168 AKVADFSLSQ------QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTI 221
Query: 60  FTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
            TG+ P DE                  S  ++  +N++ +E +     E C   + N+  
Sbjct: 222 LTGEGPFDE-----------------YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIE 264
Query: 120 ACTVESPEQRINAKEIVTKL 139
            C    P++R +   IV +L
Sbjct: 265 LCWSGDPKKRPHFSYIVKEL 284

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 29/144 (20%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-ANG----------DVYSFG 53
           L DF IA  +  +  S+ +   + T+ YM PE  ++   S  NG          DV+S G
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 254
Query: 54  IMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF 113
            +L     GK P  +I N+   L H + D  P   +E  D+    ++D+  V K      
Sbjct: 255 CILYYMTYGKTPFQQIINQISKL-HAIID--PNHEIEFPDI---PEKDLQDVLK------ 302
Query: 114 VFNLAMACTVESPEQRINAKEIVT 137
                  C    P+QRI+  E++ 
Sbjct: 303 ------CCLKRDPKQRISIPELLA 320

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  ++DF +A+ +   D     T     + +MAPE   +   +   DV+SFG+++ E FT
Sbjct: 195 VMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            G  P   I  EE+                      L +E         C + ++ +   
Sbjct: 255 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 294
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
           C    P QR   K++V  L +I
Sbjct: 295 CWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  ++DF +A+ +   D     T     + +MAPE   +   +   DV+SFG+++ E FT
Sbjct: 195 VMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            G  P   I  EE+                      L +E         C + ++ +   
Sbjct: 255 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 294
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
           C    P QR   K++V  L +I
Sbjct: 295 CWHAVPSQRPTFKQLVEDLDRI 316

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  ++DF +A+ +   D     T     + +MAPE   +   +   DV+SFG+++ E FT
Sbjct: 182 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            G  P   I  EE+                      L +E         C + ++ +   
Sbjct: 242 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 281
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
           C    P QR   K++V  L +I
Sbjct: 282 CWHAVPSQRPTFKQLVEDLDRI 303

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  ++DF +A+ +   D     T     + +MAPE   +   +   DV+SFG++L E FT
Sbjct: 188 VMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            G  P   +  EE+                      L +E         C + ++ +   
Sbjct: 248 LGGSPYPGVPVEELF--------------------KLLKEGHRMDKPSNCTNELYMMMRD 287
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
           C    P QR   K++V  L +I
Sbjct: 288 CWHAVPSQRPTFKQLVEDLDRI 309

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 29/144 (20%)
Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-ANG----------DVYSFG 53
           L DF IA  +  +  S+ +   + T+ YM PE  ++   S  NG          DV+S G
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 254
Query: 54  IMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF 113
            +L     GK P  +I N+   L H + D  P   +E  D+    ++D+  V K      
Sbjct: 255 CILYYMTYGKTPFQQIINQISKL-HAIID--PNHEIEFPDI---PEKDLQDVLK------ 302
Query: 114 VFNLAMACTVESPEQRINAKEIVT 137
                  C    P+QRI+  E++ 
Sbjct: 303 ------CCLKRDPKQRISIPELLA 320

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  ++DF +A+ +   D     T     + +MAPE   +   +   DV+SFG+++ E FT
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            G  P   I  EE+                      L +E         C + ++ +   
Sbjct: 255 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 294
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
           C    P QR   K++V  L +I
Sbjct: 295 CWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 26/151 (17%)
Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  +SDF ++++L  + ++   T+     I + APE     + ++  DV+S+GI++ E 
Sbjct: 161 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEV 220
Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
            + G++P  E+ N+                    DV    +E     +   C + ++ L 
Sbjct: 221 VSYGERPYWEMTNQ--------------------DVIKAVEEGYRLPSPMDCPAALYQLM 260
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRN 149
           + C  +    R    EIV  L    D L+RN
Sbjct: 261 LDCWQKERNSRPKFDEIVNML----DKLIRN 287

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  ++DF +A+ +   D     T     + +MAPE   +   +   DV+SFG+++ E FT
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            G  P   I  EE+                      L +E         C + ++ +   
Sbjct: 255 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 294
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
           C    P QR   K++V  L +I
Sbjct: 295 CWHAVPSQRPTFKQLVEDLDRI 316

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  ++DF +A+ +   D     T     + +MAPE   +   +   DV+SFG+++ E FT
Sbjct: 187 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            G  P   I  EE+                      L +E         C + ++ +   
Sbjct: 247 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 286
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
           C    P QR   K++V  L +I
Sbjct: 287 CWHAVPSQRPTFKQLVEDLDRI 308

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  ++DF +A+ +   D     T     + +MAPE   +   +   DV+SFG+++ E FT
Sbjct: 184 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            G  P   I  EE+                      L +E         C + ++ +   
Sbjct: 244 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 283
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
           C    P QR   K++V  L +I
Sbjct: 284 CWHAVPSQRPTFKQLVEDLDRI 305

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 39.3 bits (90), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 20/139 (14%)
Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  + DF +A+ +      + +  T   + +MAPE   +   S   DV+S+G++L E F+
Sbjct: 237 VVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            G  P   +  +E                   D     +E +   A E     ++ + + 
Sbjct: 297 LGGSPYPGVQMDE-------------------DFCSRLREGMRMRAPEYSTPEIYQIMLD 337
Query: 121 CTVESPEQRINAKEIVTKL 139
           C    P++R    E+V KL
Sbjct: 338 CWHRDPKERPRFAELVEKL 356

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	161
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	4e-26
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	4e-24
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-23
3soc_A	322	Activin receptor type-2A; structural genomics cons	5e-19
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	9e-14
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-13
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-13
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	3e-13
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	9e-13
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-12
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	6e-12
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	8e-12
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-11
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-10
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-10
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	9e-10
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-09
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-09
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-09
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-09
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	6e-09
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	7e-09
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	8e-09
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	9e-09
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-08
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-08
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-08
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-08
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-08
3aln_A	327	Dual specificity mitogen-activated protein kinase;	4e-08
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	4e-08
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	5e-08
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	6e-08
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	8e-08
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	9e-08
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-07
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-07
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-07
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-07
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-07
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	2e-07
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	3e-07
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-07
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-07
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	3e-07
4aoj_A	329	High affinity nerve growth factor receptor; transf	4e-07
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	4e-07
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	4e-07
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	4e-07
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	4e-07
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	5e-07
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	5e-07
2dyl_A	318	Dual specificity mitogen-activated protein kinase	6e-07
3fme_A	290	Dual specificity mitogen-activated protein kinase;	7e-07
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	7e-07
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	9e-07
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	9e-07
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	1e-06
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-06
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-06
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-06
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-06
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-06
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-06
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-06
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-06
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	3e-06
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-06
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	4e-06
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	4e-06
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	4e-06
3pls_A	298	Macrophage-stimulating protein receptor; protein k	5e-06
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	6e-06
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	7e-06
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	8e-06
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	8e-06
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	9e-06
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	9e-06
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-05
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	1e-05
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-05
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-05
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-05
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-05
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-05
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	3e-05
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-05
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	4e-05
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	4e-05
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	5e-05
2a19_B	284	Interferon-induced, double-stranded RNA-activated	6e-05
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	7e-05
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	8e-05
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	9e-05
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-04
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-04
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	3e-04
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	6e-04
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	8e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =   99 bits (250), Expect = 4e-26
 Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 11/152 (7%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            V  ++DF I+K  T  DQ+   T    T+GY+ PEY  +GR++   DVYSFG++L E  
Sbjct: 176 FVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235

Query: 61  TGKKPTDEIF-NEEMTLKHWVNDWLPIST-MEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
             +    +    E + L  W  +        ++VD NL  +     + K        + A
Sbjct: 236 CARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRK------FGDTA 289

Query: 119 MACTVESPEQRINAKEIVTKL---LKIRDSLL 147
           + C   S E R +  +++ KL   L++++S++
Sbjct: 290 VKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 94.6 bits (236), Expect = 4e-24
 Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 15/143 (10%)

Query: 3   AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
           A + DF +AKL+  +D  +T T    TIG++APEY   G+ S   DV+ +G+ML+E  TG
Sbjct: 173 AVVGDFGLAKLMDYKDTHVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG 231

Query: 63  KKPTDEIF---NEEMTLKHWVNDWLPIST---MEVVDVNLLSQEDIHFVAKEQCVSFVFN 116
           ++  D      ++++ L  WV     +       +VDV+L      ++  +E  V  +  
Sbjct: 232 QRAFDLARLANDDDVMLLDWV--KGLLKEKKLEALVDVDLQG----NYKDEE--VEQLIQ 283

Query: 117 LAMACTVESPEQRINAKEIVTKL 139
           +A+ CT  SP +R    E+V  L
Sbjct: 284 VALLCTQSSPMERPKMSEVVRML 306

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 92.6 bits (231), Expect = 2e-23
 Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 11/147 (7%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
             A +SDF +A+      Q++  ++ + T  YMAPE  R G ++   D+YSFG++L+E  
Sbjct: 170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEII 228

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWL--PISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
           TG    DE   E   L     +      +  + +D  +    D    + E       ++A
Sbjct: 229 TGLPAVDEH-REPQLLLDIKEEIEDEEKTIEDYIDKKM---NDADSTSVEAMY----SVA 280

Query: 119 MACTVESPEQRINAKEIVTKLLKIRDS 145
             C  E   +R + K++   L ++  S
Sbjct: 281 SQCLHEKKNKRPDIKKVQQLLQEMTAS 307

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 80.9 bits (200), Expect = 5e-19
 Identities = 27/149 (18%), Positives = 53/149 (35%), Gaps = 7/149 (4%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-----DVYSFGIM 55
           + A ++DF +A        +      + T  YMAPE                D+Y+ G++
Sbjct: 168 LTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLV 227

Query: 56  LMETFTGKKPTDEIFNEEMT-LKHWVNDWLPISTM-EVVDVNLLSQEDIHFVAKEQCVSF 113
           L E  +     D   +E M   +  +     +  M EVV           +  K   ++ 
Sbjct: 228 LWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAM 287

Query: 114 VFNLAMACTVESPEQRINAKEIVTKLLKI 142
           +      C     E R++A  +  ++ ++
Sbjct: 288 LCETIEECWDHDAEARLSAGCVGERITQM 316

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 66.1 bits (162), Expect = 9e-14
 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGK 63
           L DF IA   T  D+ +TQ    + T+ YMAPE   E   +   D+Y+   +L E  TG 
Sbjct: 175 LVDFGIASATT--DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGS 232

Query: 64  KP 65
            P
Sbjct: 233 PP 234

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 65.3 bits (160), Expect = 2e-13
 Identities = 38/146 (26%), Positives = 61/146 (41%), Gaps = 27/146 (18%)

Query: 7   DFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
           DF IA+ +     S+TQT   + T  Y++PE  R   V A  DVYS G +L E  TG+ P
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218

Query: 66  TDEIFNEE----MTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMAC 121
               F  +    +  +H   D +P S         LS +             +  + +  
Sbjct: 219 ----FTGDSPVSVAYQHVREDPIPPSAR----HEGLSAD-------------LDAVVLKA 257

Query: 122 TVESPEQR-INAKEIVTKLLKIRDSL 146
             ++PE R   A E+   L+++ +  
Sbjct: 258 LAKNPENRYQTAAEMRADLVRVHNGE 283

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 65.0 bits (159), Expect = 2e-13
 Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 30/147 (20%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE--YGREGRVSANGDVYSFGIMLME 58
           + A ++DF +++         + +  L    +MAPE     E   +   D YSF ++L  
Sbjct: 166 VCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYT 220

Query: 59  TFTGKKPTDEIFNEEMTLKHWVNDW---LPISTMEVVDVNLLSQEDIHFVAKEQCVSFVF 115
             TG+ P DE    ++   + + +      I                     E C   + 
Sbjct: 221 ILTGEGPFDEYSYGKIKFINMIREEGLRPTIP--------------------EDCPPRLR 260

Query: 116 NLAMACTVESPEQRINAKEIVTKLLKI 142
           N+   C    P++R +   IV +L ++
Sbjct: 261 NVIELCWSGDPKKRPHFSYIVKELSEL 287

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 64.6 bits (158), Expect = 3e-13
 Identities = 40/149 (26%), Positives = 62/149 (41%), Gaps = 28/149 (18%)

Query: 7   DFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
           DF IAK L+  + S+TQT   L T+ Y +PE  +        D+YS GI+L E   G+ P
Sbjct: 154 DFGIAKALS--ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211

Query: 66  TDEIFNEE----MTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMAC 121
               FN E    + +KH + D +P  T +V     + Q              + N+ +  
Sbjct: 212 ----FNGETAVSIAIKH-IQDSVPNVTTDVRKD--IPQS-------------LSNVILRA 251

Query: 122 TVESPEQR-INAKEIVTKLLKIRDSLLRN 149
           T +    R    +E+   L  +      N
Sbjct: 252 TEKDKANRYKTIQEMKDDLSSVLHENRAN 280

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 63.1 bits (154), Expect = 9e-13
 Identities = 33/142 (23%), Positives = 54/142 (38%), Gaps = 18/142 (12%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE---YGREGRVSANGDVYSFGIMLM 57
               + DF +A   +    S    Q   +I +MAPE          S   DVY+FGI+L 
Sbjct: 157 NTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY 216

Query: 58  ETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNL 117
           E  TG+ P   I N +  +             E+V    LS +      +  C   +  L
Sbjct: 217 ELMTGQLPYSNINNRDQII-------------EMVGRGSLSPDLS--KVRSNCPKRMKRL 261

Query: 118 AMACTVESPEQRINAKEIVTKL 139
              C  +  ++R +   I+ ++
Sbjct: 262 MAECLKKKRDERPSFPRILAEI 283

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 62.3 bits (152), Expect = 2e-12
 Identities = 34/147 (23%), Positives = 53/147 (36%), Gaps = 27/147 (18%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  + DF  A      D     T    +  +MAPE       S   DV+S+GI+L E  T
Sbjct: 144 VLKICDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT 198

Query: 62  GKKPTDEIFNEEMTLKHWVNDWL--PISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
            +KP DEI      +   V++    P+                     +     + +L  
Sbjct: 199 RRKPFDEIGGPAFRIMWAVHNGTRPPLI--------------------KNLPKPIESLMT 238

Query: 120 ACTVESPEQRINAKEIVTKLLKIRDSL 146
            C  + P QR + +EIV  +  +    
Sbjct: 239 RCWSKDPSQRPSMEEIVKIMTHLMRYF 265

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 61.0 bits (148), Expect = 8e-12
 Identities = 31/167 (18%), Positives = 55/167 (32%), Gaps = 18/167 (10%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA------TIGYMAPEYGRE-------GRVSANG 47
               +SDF ++  LTG        +  A      TI YMAPE                  
Sbjct: 157 GTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQV 216

Query: 48  DVYSFGIMLMETFTGKK---PTDEIFNEEMTLKHWVNDWLPISTME--VVDVNLLSQEDI 102
           D+Y+ G++  E F       P + +   +M  +  V +      M+  V       +   
Sbjct: 217 DMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPE 276

Query: 103 HFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRN 149
            +      V  +      C  +  E R+ A+    ++ ++     RN
Sbjct: 277 AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN 323

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 59.7 bits (145), Expect = 2e-11
 Identities = 25/151 (16%), Positives = 50/151 (33%), Gaps = 9/151 (5%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPE------YGREGRVSANGDVYSFGIML 56
           ++D  +A     +   +         T  YM PE           +     D+YSFG++L
Sbjct: 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLIL 242

Query: 57  METFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDI-HFVAKEQCVSFVF 115
            E          +   ++     V        M  +      +    +  + ++C+  + 
Sbjct: 243 WEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMG 302

Query: 116 NLAMACTVESPEQRINAKEIVTKLLKIRDSL 146
            L   C   +P  R+ A  +   L K+ +S 
Sbjct: 303 KLMTECWAHNPASRLTALRVKKTLAKMSESQ 333

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 57.0 bits (138), Expect = 2e-10
 Identities = 33/172 (19%), Positives = 58/172 (33%), Gaps = 34/172 (19%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA------------TIGYMAPEYGREGRVSANGD 48
               ++DF +A+L+  E       ++L                +MAPE           D
Sbjct: 145 KNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVD 204

Query: 49  VYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKE 108
           V+SFGI+L E                       D+LP +    +D  L  +  +      
Sbjct: 205 VFSFGIVLCEIIGRVNADP--------------DYLPRT----MDFGLNVRGFLDRYCPP 246

Query: 109 QCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCIRQSNL 160
            C    F + + C    PE+R +  ++   L    ++L  ++ G       L
Sbjct: 247 NCPPSFFPITVRCCDLDPEKRPSFVKLEHWL----ETLRMHLAGHLPLGPQL 294

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 56.5 bits (137), Expect = 2e-10
 Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 21/147 (14%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
               + DF +++L      S        T  +MAPE  R+   +   DVYSFG++L E  
Sbjct: 176 YTVKVCDFGLSRLKASTFLSSKSA--AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELA 233

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
           T ++P                 W  ++  +V  V  +  +             V  +   
Sbjct: 234 TLQQP-----------------WGNLNPAQV--VAAVGFKCKRLEIPRNLNPQVAAIIEG 274

Query: 121 CTVESPEQRINAKEIVTKLLKIRDSLL 147
           C    P +R +   I+  L  +  S +
Sbjct: 275 CWTNEPWKRPSFATIMDLLRPLIKSAV 301

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 54.6 bits (132), Expect = 9e-10
 Identities = 32/139 (23%), Positives = 48/139 (34%), Gaps = 25/139 (17%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF +A+        M+         +MAPE  R    S   DV+S+G++L E  TG+ 
Sbjct: 157 ITDFGLAREWH-RTTKMSAA---GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEV 212

Query: 65  PTDEIFNEEMTLKHWVNDW-LPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
           P   I    +     +N   LPI                       C      L   C  
Sbjct: 213 PFRGIDGLAVAYGVAMNKLALPIP--------------------STCPEPFAKLMEDCWN 252

Query: 124 ESPEQRINAKEIVTKLLKI 142
             P  R +   I+ +L  I
Sbjct: 253 PDPHSRPSFTNILDQLTTI 271

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 54.2 bits (131), Expect = 1e-09
 Identities = 30/147 (20%), Positives = 51/147 (34%), Gaps = 29/147 (19%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG---DVYSFGIMLM 57
           M A +S   +         S      +    ++APE  ++     N    D++SF ++L 
Sbjct: 150 MTARISMADVKF-------SFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLW 202

Query: 58  ETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNL 117
           E  T + P  +                 +S ME+     ++ E +           V  L
Sbjct: 203 ELVTREVPFAD-----------------LSNMEI--GMKVALEGLRPTIPPGISPHVSKL 243

Query: 118 AMACTVESPEQRINAKEIVTKLLKIRD 144
              C  E P +R     IV  L K++D
Sbjct: 244 MKICMNEDPAKRPKFDMIVPILEKMQD 270

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 54.3 bits (131), Expect = 1e-09
 Identities = 17/150 (11%), Positives = 48/150 (32%), Gaps = 31/150 (20%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANG---------DVYSF 52
           ++DF +  +         + +       + ++APE  R+                DV++ 
Sbjct: 170 ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFAL 229

Query: 53  GIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVS 112
           G +  E    + P    F +              + +  +   +        +++     
Sbjct: 230 GTIWYELHAREWP----F-KTQP---------AEAIIWQMGTGMKPN-----LSQIGMGK 270

Query: 113 FVFNLAMACTVESPEQRINAKEIVTKLLKI 142
            + ++ + C     E+R    +++  L K+
Sbjct: 271 EISDILLFCWAFEQEERPTFTKLMDMLEKL 300

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 54.1 bits (130), Expect = 2e-09
 Identities = 12/62 (19%), Positives = 17/62 (27%), Gaps = 9/62 (14%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGK 63
           L D             +        T G+ APE  R    +   D+Y+ G  L       
Sbjct: 222 LIDLGAVS-------RINSFGYLYGTPGFQAPEIVR-TGPTVATDIYTVGRTLAALTLDL 273

Query: 64  KP 65
             
Sbjct: 274 PT 275

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 53.9 bits (130), Expect = 2e-09
 Identities = 26/151 (17%), Positives = 51/151 (33%), Gaps = 9/151 (5%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPE------YGREGRVSANGDVYSF 52
               ++D  +A + +     +         T  YMAPE                 D+++F
Sbjct: 150 GQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAF 209

Query: 53  GIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDI-HFVAKEQCV 111
           G++L E          + + +      V +      M  V      + +I +    +  +
Sbjct: 210 GLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTL 269

Query: 112 SFVFNLAMACTVESPEQRINAKEIVTKLLKI 142
           + +  L   C  ++P  R+ A  I   L KI
Sbjct: 270 TSLAKLMKECWYQNPSARLTALRIKKTLTKI 300

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 52.6 bits (127), Expect = 6e-09
 Identities = 39/146 (26%), Positives = 58/146 (39%), Gaps = 25/146 (17%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            V  +SDF +++       + +       + + APE    GR S+  DV+SFGI+L ETF
Sbjct: 250 NVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETF 309

Query: 61  T-GKKPTDEIFNEEMTLKHWVND--WLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNL 117
           + G  P   + N++   + +V     LP                      E C   VF L
Sbjct: 310 SLGASPYPNLSNQQ--TREFVEKGGRLP--------------------CPELCPDAVFRL 347

Query: 118 AMACTVESPEQRINAKEIVTKLLKIR 143
              C    P QR +   I  +L  IR
Sbjct: 348 MEQCWAYEPGQRPSFSTIYQELQSIR 373

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 52.6 bits (126), Expect = 7e-09
 Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 22/142 (15%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  ++DF +A+L+   + +  Q      I + APE    GR +   DV+SFGI+L E  T
Sbjct: 401 VCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELTT 459

Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            G+ P   + N E               ++ V+               +C   + +L   
Sbjct: 460 KGRVPYPGMVNRE--------------VLDQVE------RGYRMPCPPECPESLHDLMCQ 499

Query: 121 CTVESPEQRINAKEIVTKLLKI 142
           C  + PE+R   + +   L   
Sbjct: 500 CWRKEPEERPTFEYLQAFLEDY 521

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 52.4 bits (126), Expect = 8e-09
 Identities = 31/146 (21%), Positives = 54/146 (36%), Gaps = 21/146 (14%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            VA + DF +A+ +            +  + +M PE   EG  ++  D +SFG++L E F
Sbjct: 221 RVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 280

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           + G  P     N+E+ L+             V     +          + C   V+ +  
Sbjct: 281 SLGYMPYPSKSNQEV-LEF------------VTSGGRMDP-------PKNCPGPVYRIMT 320

Query: 120 ACTVESPEQRINAKEIVTKLLKIRDS 145
            C    PE R N   I+ ++      
Sbjct: 321 QCWQHQPEDRPNFAIILERIEYCTQD 346

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 51.5 bits (124), Expect = 1e-08
 Identities = 31/146 (21%), Positives = 54/146 (36%), Gaps = 21/146 (14%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            VA + DF +A+ +            +  + +M PE   EG  ++  D +SFG++L E F
Sbjct: 180 RVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           + G  P     N+E+ L+             V     +          + C   V+ +  
Sbjct: 240 SLGYMPYPSKSNQEV-LEF------------VTSGGRMDP-------PKNCPGPVYRIMT 279

Query: 120 ACTVESPEQRINAKEIVTKLLKIRDS 145
            C    PE R N   I+ ++      
Sbjct: 280 QCWQHQPEDRPNFAIILERIEYCTQD 305

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 51.3 bits (123), Expect = 1e-08
 Identities = 21/154 (13%), Positives = 46/154 (29%), Gaps = 9/154 (5%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPE------YGREGRVSANGDVYSF 52
               ++D  +A        ++         T  YMAPE        +        D+Y+ 
Sbjct: 184 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAM 243

Query: 53  GIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDI-HFVAKEQCV 111
           G++  E            + ++     V     +  M  V      + +I +     + +
Sbjct: 244 GLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEAL 303

Query: 112 SFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS 145
             +  +   C   +   R+ A  I   L ++   
Sbjct: 304 RVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 22/142 (15%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  ++DF +A+L+   + +  Q      I + APE    GR +   DV+SFGI+L E  T
Sbjct: 318 VCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376

Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            G+ P   + N E               ++ V+               +C   + +L   
Sbjct: 377 KGRVPYPGMVNRE--------------VLDQVE------RGYRMPCPPECPESLHDLMCQ 416

Query: 121 CTVESPEQRINAKEIVTKLLKI 142
           C  + PE+R   + +   L   
Sbjct: 417 CWRKEPEERPTFEYLQAFLEDY 438

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 50.8 bits (122), Expect = 2e-08
 Identities = 29/140 (20%), Positives = 50/140 (35%), Gaps = 33/140 (23%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIG---YMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           + D  +A L          +   A IG   +MAPE   E     + DVY+FG+ ++E  T
Sbjct: 173 IGDLGLATL-------KRASFAKAVIGTPEFMAPEMYEEK-YDESVDVYAFGMCMLEMAT 224

Query: 62  GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMAC 121
            + P  E  N     +   +   P S  +V                 +    +      C
Sbjct: 225 SEYPYSECQNAAQIYRRVTSGVKPASFDKVAI--------------PEVKEII----EGC 266

Query: 122 TVESPEQRINAKEIVTKLLK 141
             ++ ++R + K+    LL 
Sbjct: 267 IRQNKDERYSIKD----LLN 282

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 50.0 bits (120), Expect = 4e-08
 Identities = 36/141 (25%), Positives = 49/141 (34%), Gaps = 26/141 (18%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE----YGREGRVSANGDVYSFGIMLMETF 60
           L DF I+  L     S+ +T+      YMAPE               DV+S GI L E  
Sbjct: 167 LCDFGISGQLV---DSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELA 223

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
           TG+ P  +  +    L   V    P   +   +    S   I+FV               
Sbjct: 224 TGRFPYPKWNSVFDQLTQVVKGDPP--QLSNSEEREFSPSFINFVNL------------- 268

Query: 121 CTVESPEQRINAKEIVTKLLK 141
           C  +   +R   KE    LLK
Sbjct: 269 CLTKDESKRPKYKE----LLK 285

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 50.2 bits (120), Expect = 4e-08
 Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 22/143 (15%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            +  ++DF +++L+T  D           I + APE     + S   DV++FG++L E  
Sbjct: 355 HLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 413

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           T G  P   I   +                E+++      +D      E C   V+ L  
Sbjct: 414 TYGMSPYPGIDLSQ--------------VYELLE------KDYRMERPEGCPEKVYELMR 453

Query: 120 ACTVESPEQRINAKEIVTKLLKI 142
           AC   +P  R +  EI      +
Sbjct: 454 ACWQWNPSDRPSFAEIHQAFETM 476

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 50.1 bits (120), Expect = 5e-08
 Identities = 30/142 (21%), Positives = 53/142 (37%), Gaps = 29/142 (20%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE-----------YGREGRVSANGDVYSFG 53
           L DF IA  +  +  S+ +   + T+ YM PE              + ++S   DV+S G
Sbjct: 148 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 207

Query: 54  IMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF 113
            +L     GK P  +I N+   L   ++    I   ++       ++    +        
Sbjct: 208 CILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP-----EKDLQDVLKC------ 256

Query: 114 VFNLAMACTVESPEQRINAKEI 135
                  C    P+QRI+  E+
Sbjct: 257 -------CLKRDPKQRISIPEL 271

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 49.6 bits (119), Expect = 6e-08
 Identities = 25/154 (16%), Positives = 54/154 (35%), Gaps = 22/154 (14%)

Query: 1   MVAHLSDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
            +  + DF +AK +  G +    +    + + + APE  +E +     DV+SFG+ L E 
Sbjct: 171 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 230

Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCV 111
            T               +       +    M V+ +          + +       ++C 
Sbjct: 231 LTHCDSSQSPPTKFLELIG------IAQGQMTVLRL-------TELLERGERLPRPDKCP 277

Query: 112 SFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS 145
           + V++L   C       R   + ++  L  + + 
Sbjct: 278 AEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 311

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 49.3 bits (118), Expect = 8e-08
 Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 3/64 (4%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIG---YMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           L DF  A  L  +    +        G   +MAPE        A  D++S   M++    
Sbjct: 192 LCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN 251

Query: 62  GKKP 65
           G  P
Sbjct: 252 GCHP 255

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 49.2 bits (118), Expect = 9e-08
 Identities = 30/142 (21%), Positives = 53/142 (37%), Gaps = 29/142 (20%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE-----------YGREGRVSANGDVYSFG 53
           L DF IA  +  +  S+ +   + T+ YM PE              + ++S   DV+S G
Sbjct: 167 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 226

Query: 54  IMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF 113
            +L     GK P  +I N+   L   ++    I   ++       ++    +        
Sbjct: 227 CILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP-----EKDLQDVLKC------ 275

Query: 114 VFNLAMACTVESPEQRINAKEI 135
                  C    P+QRI+  E+
Sbjct: 276 -------CLKRDPKQRISIPEL 290

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 33/151 (21%), Positives = 66/151 (43%), Gaps = 21/151 (13%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
               + DF + + +   D      + L  + +M+PE  ++G  +   DV+SFG++L E  
Sbjct: 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           T  ++P   + NE++ L+             V++  LL +        + C   +F L  
Sbjct: 235 TLAEQPYQGLSNEQV-LRF------------VMEGGLLDK-------PDNCPDMLFELMR 274

Query: 120 ACTVESPEQRINAKEIVTKLLKIRDSLLRNV 150
            C   +P+ R +  EI++ + +  +   R V
Sbjct: 275 MCWQYNPKMRPSFLEIISSIKEEMEPGFREV 305

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 49.0 bits (117), Expect = 1e-07
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 29/142 (20%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE-----------YGREGRVSANGDVYSFG 53
           L DF IA  +  +  S+ +   +  + YM PE              + ++S   DV+S G
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 254

Query: 54  IMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF 113
            +L     GK P  +I N+   L   ++    I   ++       ++    +        
Sbjct: 255 CILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP-----EKDLQDVLKC------ 303

Query: 114 VFNLAMACTVESPEQRINAKEI 135
                  C    P+QRI+  E+
Sbjct: 304 -------CLKRDPKQRISIPEL 318

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 48.8 bits (117), Expect = 1e-07
 Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 35/148 (23%)

Query: 6   SDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKK 64
            DF +++ +   D       T+  I +M PE     + +   DV+SFG++L E FT GK+
Sbjct: 175 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQ 234

Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCVSFVFNL 117
           P  ++ N E+                           I  + +         C   V+++
Sbjct: 235 PWFQLSNTEV---------------------------IECITQGRVLERPRVCPKEVYDV 267

Query: 118 AMACTVESPEQRINAKEIVTKLLKIRDS 145
            + C    P+QR+N KEI   L  +  +
Sbjct: 268 MLGCWQREPQQRLNIKEIYKILHALGKA 295

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 48.4 bits (116), Expect = 2e-07
 Identities = 27/154 (17%), Positives = 54/154 (35%), Gaps = 35/154 (22%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           M   ++DF ++K +   D           + ++A E   +   ++  DV++FG+ + E  
Sbjct: 184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIA 243

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCVS 112
           T G  P   + N EM                             ++         E C+ 
Sbjct: 244 TRGMTPYPGVQNHEM---------------------------YDYLLHGHRLKQPEDCLD 276

Query: 113 FVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL 146
            ++ +  +C    P  R     +  +L K+ +SL
Sbjct: 277 ELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 29/150 (19%), Positives = 57/150 (38%), Gaps = 21/150 (14%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQ-TLATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
            +  + DF + + L   D      +       + APE  +    S   D + FG+ L E 
Sbjct: 158 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 217

Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
           FT G++P                 W+ ++  +++    + +E       E C   ++N+ 
Sbjct: 218 FTYGQEP-----------------WIGLNGSQILH--KIDKEGERLPRPEDCPQDIYNVM 258

Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLR 148
           + C    PE R     +   LL+ + + +R
Sbjct: 259 VQCWAHKPEDRPTFVALRDFLLEAQPTDMR 288

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 48.1 bits (115), Expect = 2e-07
 Identities = 27/154 (17%), Positives = 57/154 (37%), Gaps = 35/154 (22%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           M   ++DF +++ +   D       +   + ++A E   +   + + DV++FG+ + E  
Sbjct: 174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIM 233

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCVS 112
           T G+ P   I N E+                            +++          +C+ 
Sbjct: 234 TRGQTPYAGIENAEI---------------------------YNYLIGGNRLKQPPECME 266

Query: 113 FVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL 146
            V++L   C    P+QR +   +  +L  I   L
Sbjct: 267 EVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 47.7 bits (114), Expect = 3e-07
 Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 21/143 (14%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            V  ++DF +A+ +   D     T     + +MAPE   +   +   DV+SFG+++ E F
Sbjct: 240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 299

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           T G  P   I  EE+  K             + + + + +          C + ++ +  
Sbjct: 300 TLGGSPYPGIPVEEL-FKL------------LKEGHRMDK-------PANCTNELYMMMR 339

Query: 120 ACTVESPEQRINAKEIVTKLLKI 142
            C    P QR   K++V  L +I
Sbjct: 340 DCWHAVPSQRPTFKQLVEDLDRI 362

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 47.6 bits (114), Expect = 3e-07
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 1/74 (1%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
               ++DF +AKLL  E++          I +MA E       +   DV+S+G+ + E  
Sbjct: 154 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213

Query: 61  T-GKKPTDEIFNEE 73
           T G KP D I   E
Sbjct: 214 TFGSKPYDGIPASE 227

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 47.9 bits (114), Expect = 3e-07
 Identities = 27/149 (18%), Positives = 50/149 (33%), Gaps = 36/149 (24%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           L DF +++ +         ++    I +MAPE     R ++  DV+ FG+ + E    G 
Sbjct: 532 LGDFGLSRYMEDSTYYKA-SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 590

Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCVSFVFN 116
           KP   + N ++                           I  +           C   +++
Sbjct: 591 KPFQGVKNNDV---------------------------IGRIENGERLPMPPNCPPTLYS 623

Query: 117 LAMACTVESPEQRINAKEIVTKLLKIRDS 145
           L   C    P +R    E+  +L  I + 
Sbjct: 624 LMTKCWAYDPSRRPRFTELKAQLSTILEE 652

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 47.4 bits (113), Expect = 3e-07
 Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 21/143 (14%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            V  ++DF +A+ +   D     T     + +MAPE   +   +   DV+SFG++L E F
Sbjct: 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 287

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           T G  P   +  EE+  K             + + + + +          C + ++ +  
Sbjct: 288 TLGGSPYPGVPVEEL-FKL------------LKEGHRMDK-------PSNCTNELYMMMR 327

Query: 120 ACTVESPEQRINAKEIVTKLLKI 142
            C    P QR   K++V  L +I
Sbjct: 328 DCWHAVPSQRPTFKQLVEDLDRI 350

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 47.3 bits (113), Expect = 4e-07
 Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 21/146 (14%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           +V  + DF +++ +   D      +T+  I +M PE     + +   DV+SFG++L E F
Sbjct: 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 254

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           T GK+P  ++ N E  +              +     L +          C   V+ +  
Sbjct: 255 TYGKQPWYQLSNTEA-IDC------------ITQGRELER-------PRACPPEVYAIMR 294

Query: 120 ACTVESPEQRINAKEIVTKLLKIRDS 145
            C    P+QR + K++  +L  +  +
Sbjct: 295 GCWQREPQQRHSIKDVHARLQALAQA 320

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 47.3 bits (113), Expect = 4e-07
 Identities = 31/149 (20%), Positives = 61/149 (40%), Gaps = 19/149 (12%)

Query: 6   SDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
            DF + K+L   ++    +    + I + APE   E + S   DV+SFG++L E FT  +
Sbjct: 156 GDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 215

Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCVSFVFNL 117
            +     E M +            M V  +       I  +         + C   ++ +
Sbjct: 216 KSKSPPAEFMRMIGND----KQGQMIVFHL-------IELLKNNGRLPRPDGCPDEIYMI 264

Query: 118 AMACTVESPEQRINAKEIVTKLLKIRDSL 146
              C   +  QR + +++  ++ +IRD++
Sbjct: 265 MTECWNNNVNQRPSFRDLALRVDQIRDNM 293

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 47.5 bits (113), Expect = 4e-07
 Identities = 23/137 (16%), Positives = 45/137 (32%), Gaps = 25/137 (18%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEY---GREGRVSANGDVYSFGIMLMETF 60
           +SDF + K L     S ++   +  T G++APE      +   +   D++S G +     
Sbjct: 164 ISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVI 223

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQE-DIHFVAKEQCVSFVF-NLA 118
           +                       P         N+L     +  +  E+    +   L 
Sbjct: 224 SEGSH-------------------PFGKSLQRQANILLGACSLDCLHPEKHEDVIARELI 264

Query: 119 MACTVESPEQRINAKEI 135
                  P++R +AK +
Sbjct: 265 EKMIAMDPQKRPSAKHV 281

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 47.3 bits (113), Expect = 4e-07
 Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
               ++DF +A LL  +D+ +  ++    I +MA E    G+ +   DV+S+G+ + E  
Sbjct: 152 SQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELM 211

Query: 61  T-GKKPTDEIFNEEM 74
           T G +P   +   E+
Sbjct: 212 TFGAEPYAGLRLAEV 226

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 47.2 bits (113), Expect = 4e-07
 Identities = 34/155 (21%), Positives = 62/155 (40%), Gaps = 36/155 (23%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            V  +SDF + + +  +DQ  + T T   + + +PE     R S+  DV+SFG+++ E F
Sbjct: 141 QVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 199

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCVS 112
           + GK P +   N E+                           +  ++            +
Sbjct: 200 SEGKIPYENRSNSEV---------------------------VEDISTGFRLYKPRLAST 232

Query: 113 FVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL 147
            V+ +   C  E PE R     ++ +L +I +S L
Sbjct: 233 HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 267

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 46.9 bits (112), Expect = 5e-07
 Identities = 25/152 (16%), Positives = 53/152 (34%), Gaps = 26/152 (17%)

Query: 6   SDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
            DF + K + T ++    +    + + + APE   + +     DV+SFG+ L E  T   
Sbjct: 168 GDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCD 227

Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCVSFVFN 116
             +  +      +            M V  +       ++ + +         C   V+ 
Sbjct: 228 SDSSPMALFLKMIGP------THGQMTVTRL-------VNTLKEGKRLPCPPNCPDEVYQ 274

Query: 117 LAMACTVESPEQRINAKEIVTKLLKIRDSLLR 148
           L   C    P  R + + ++       ++LL+
Sbjct: 275 LMRKCWEFQPSNRTSFQNLIEGF----EALLK 302

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 47.0 bits (112), Expect = 5e-07
 Identities = 31/149 (20%), Positives = 60/149 (40%), Gaps = 19/149 (12%)

Query: 6   SDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
            DF + K+L   ++    +    + I + APE   E + S   DV+SFG++L E FT  +
Sbjct: 187 GDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 246

Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCVSFVFNL 117
            +     E M +            M V  +       I  +         + C   ++ +
Sbjct: 247 KSKSPPAEFMRMIGND----KQGQMIVFHL-------IELLKNNGRLPRPDGCPDEIYMI 295

Query: 118 AMACTVESPEQRINAKEIVTKLLKIRDSL 146
              C   +  QR + +++  ++ +IRD +
Sbjct: 296 MTECWNNNVNQRPSFRDLALRVDQIRDQM 324

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 46.6 bits (111), Expect = 6e-07
 Identities = 29/142 (20%), Positives = 47/142 (33%), Gaps = 29/142 (20%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE-----YGREGRVSANGDVYSFGIMLMET 59
           L DF I+  L        + ++     YMAPE        +       DV+S GI L+E 
Sbjct: 166 LCDFGISGRLV---DDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVEL 222

Query: 60  FTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
            TG+ P      +   L   + +  P+    +      S +   FV              
Sbjct: 223 ATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMG----FSGDFQSFVKD------------ 266

Query: 120 ACTVESPEQRINAKEIVTKLLK 141
            C  +   +R    +    LL+
Sbjct: 267 -CLTKDHRKRPKYNK----LLE 283

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 46.5 bits (111), Expect = 7e-07
 Identities = 28/141 (19%), Positives = 49/141 (34%), Gaps = 29/141 (20%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE----YGREGRVSANGDVYSFGIMLMETF 60
           + DF I+  L      + +        YMAPE       +   S   D++S GI ++E  
Sbjct: 151 MCDFGISGYLV---DDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA 207

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
             + P D        LK  V +  P         +  S E + F ++             
Sbjct: 208 ILRFPYDSWGTPFQQLKQVVEEPSPQL-----PADKFSAEFVDFTSQ------------- 249

Query: 121 CTVESPEQRINAKEIVTKLLK 141
           C  ++ ++R    E    L++
Sbjct: 250 CLKKNSKERPTYPE----LMQ 266

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 46.6 bits (111), Expect = 7e-07
 Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 22/142 (15%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           V  ++DF +A+++  +++   +      I + APE    G  +   DV+SFGI+LME  T
Sbjct: 322 VCKIADFGLARVIE-DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380

Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            G+ P   + N E               +  +      +        E C   ++N+ M 
Sbjct: 381 YGRIPYPGMSNPE--------------VIRAL------ERGYRMPRPENCPEELYNIMMR 420

Query: 121 CTVESPEQRINAKEIVTKLLKI 142
           C    PE+R   + I + L   
Sbjct: 421 CWKNRPEERPTFEYIQSVLDDF 442

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 46.2 bits (110), Expect = 9e-07
 Identities = 33/146 (22%), Positives = 62/146 (42%), Gaps = 21/146 (14%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           MV  ++DF +++ +   D           I +M PE     R +   DV+++G++L E F
Sbjct: 211 MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           + G +P   + +EE+ + +            V D N+L+         E C   ++NL  
Sbjct: 271 SYGLQPYYGMAHEEV-IYY------------VRDGNILAC-------PENCPLELYNLMR 310

Query: 120 ACTVESPEQRINAKEIVTKLLKIRDS 145
            C  + P  R +   I   L ++ + 
Sbjct: 311 LCWSKLPADRPSFCSIHRILQRMCER 336

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 46.1 bits (110), Expect = 9e-07
 Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 21/143 (14%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            V  ++DF +A+ +   D     T     + +MAPE   +   +   DV+SFG+++ E F
Sbjct: 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           T G  P   I  EE+  K             + + + + +          C + ++ +  
Sbjct: 254 TLGGSPYPGIPVEEL-FKL------------LKEGHRMDK-------PANCTNELYMMMR 293

Query: 120 ACTVESPEQRINAKEIVTKLLKI 142
            C    P QR   K++V  L +I
Sbjct: 294 DCWHAVPSQRPTFKQLVEDLDRI 316

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 46.2 bits (110), Expect = 1e-06
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 1/74 (1%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
               ++DF +AKLL  E++          I +MA E       +   DV+S+G+ + E  
Sbjct: 154 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 213

Query: 61  T-GKKPTDEIFNEE 73
           T G KP D I   E
Sbjct: 214 TFGSKPYDGIPASE 227

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 45.8 bits (108), Expect = 1e-06
 Identities = 8/66 (12%), Positives = 17/66 (25%), Gaps = 6/66 (9%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE-----YGREGRVSANGDVYSFGIMLMET 59
           L+ F       G        +  A     A             ++   D ++ G+ +   
Sbjct: 252 LTGFEHLVRD-GASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWI 310

Query: 60  FTGKKP 65
           +    P
Sbjct: 311 WCADLP 316

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 45.7 bits (109), Expect = 1e-06
 Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 35/147 (23%)

Query: 6   SDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKK 64
           SD  + + +   D       +L  I +MAPE    G+ S + D++S+G++L E F+ G +
Sbjct: 170 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQ 229

Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCVSFVFNL 117
           P     N+++                           +  +         + C ++V+ L
Sbjct: 230 PYCGYSNQDV---------------------------VEMIRNRQVLPCPDDCPAWVYAL 262

Query: 118 AMACTVESPEQRINAKEIVTKLLKIRD 144
            + C  E P +R   K+I ++L    +
Sbjct: 263 MIECWNEFPSRRPRFKDIHSRLRAWGN 289

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 45.6 bits (108), Expect = 2e-06
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           L DF ++  L     SM  +  + T  YM+PE  +    S   D++S G+ L+E   G+ 
Sbjct: 173 LCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 228

Query: 65  P 65
           P
Sbjct: 229 P 229

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 45.7 bits (108), Expect = 2e-06
 Identities = 30/166 (18%), Positives = 60/166 (36%), Gaps = 36/166 (21%)

Query: 1   MVAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
             A +SDF ++K L  +D     ++     + + APE     + S+  DV+S+G+ + E 
Sbjct: 473 HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEA 532

Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCV 111
            + G+KP  ++                              E + F+ +        +C 
Sbjct: 533 LSYGQKPYKKMKG---------------------------PEVMAFIEQGKRMECPPECP 565

Query: 112 SFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCIRQ 157
             ++ L   C +   E R +   +  ++     SL   V G    +
Sbjct: 566 PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGGSALE 611

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 25/153 (16%), Positives = 59/153 (38%), Gaps = 36/153 (23%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            V  +SDF +++ +  +D+  +   +   + +  PE     + S+  D+++FG+++ E +
Sbjct: 157 GVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 215

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCVS 112
           + GK P +   N E                               +A+            
Sbjct: 216 SLGKMPYERFTNSET---------------------------AEHIAQGLRLYRPHLASE 248

Query: 113 FVFNLAMACTVESPEQRINAKEIVTKLLKIRDS 145
            V+ +  +C  E  ++R   K +++ +L + D 
Sbjct: 249 KVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 45.1 bits (107), Expect = 2e-06
 Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 37/158 (23%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLAT--IGYMAPEYGREGRVSANGDVYSFGIMLME 58
               ++DF +A+ +  ++      +T A   + +MA E  +  + +   DV+SFG++L E
Sbjct: 229 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 288

Query: 59  TFT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQC 110
             T G  P  ++   ++                             ++ +       E C
Sbjct: 289 LMTRGAPPYPDVNTFDI---------------------------TVYLLQGRRLLQPEYC 321

Query: 111 VSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR 148
              ++ + + C     E R +  E+V+++  I  + + 
Sbjct: 322 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 359

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 14/134 (10%), Positives = 30/134 (22%), Gaps = 19/134 (14%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY--GREGRVSANGDVYSFGIMLMETFTG 62
           L D S    + G     +       + Y   E+        +   + +  G+ +   +  
Sbjct: 235 LGDVSALWKV-GTRGPASSV----PVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL 289

Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
             P    F               +       +   S   +    K         L     
Sbjct: 290 FLP----FGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKT--------LIGRFL 337

Query: 123 VESPEQRINAKEIV 136
                +R+   E +
Sbjct: 338 NFDRRRRLLPLEAM 351

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 29/150 (19%), Positives = 56/150 (37%), Gaps = 35/150 (23%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
               +SDF +++ +  ED  + ++Q    + +MA E   +   +   DV+SFG++L E  
Sbjct: 187 RKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCVS 112
           T G  P   I  E +                            + +         + C  
Sbjct: 247 TLGGNPYPGIPPERL---------------------------FNLLKTGHRMERPDNCSE 279

Query: 113 FVFNLAMACTVESPEQRINAKEIVTKLLKI 142
            ++ L + C  + P++R    +I   L K+
Sbjct: 280 EMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 44.6 bits (106), Expect = 3e-06
 Identities = 31/149 (20%), Positives = 52/149 (34%), Gaps = 22/149 (14%)

Query: 6   SDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           +DF +AKLL   +D  + +    + I + APE   +   S   DV+SFG++L E FT   
Sbjct: 169 ADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCD 228

Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCVSFVFN 116
           K                     +  M            +  + +         C + V  
Sbjct: 229 KS-------------CSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHE 275

Query: 117 LAMACTVESPEQRINAKEIVTKLLKIRDS 145
           L   C   SP+ R +   +  +L  +   
Sbjct: 276 LMKLCWAPSPQDRPSFSALGPQLDMLWSG 304

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 44.7 bits (106), Expect = 3e-06
 Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 38/171 (22%)

Query: 1   MVAHLSDFSIAKLLT-GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  +SDF + ++L    + + T       I + +PE     + ++  DV+S+GI+L E 
Sbjct: 184 LVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243

Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCV 111
            + G++P  E+ N                           Q+ I  V +         C 
Sbjct: 244 MSYGERPYWEMSN---------------------------QDVIKAVDEGYRLPPPMDCP 276

Query: 112 SFVFNLAMACTVESPEQRINAKEIVTKLLK-IRD-SLLRNVGGRCIRQSNL 160
           + ++ L + C  +    R   ++IV+ L K IR+   L+ +     R SNL
Sbjct: 277 AALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKIITSAAARPSNL 327

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 44.2 bits (105), Expect = 4e-06
 Identities = 31/150 (20%), Positives = 51/150 (34%), Gaps = 36/150 (24%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            +  ++DF +++L+T  D           I + APE     + S   DV++FG++L E  
Sbjct: 148 HLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCVS 112
           T G  P   I   ++                              + K       E C  
Sbjct: 207 TYGMSPYPGIDLSQV---------------------------YELLEKDYRMERPEGCPE 239

Query: 113 FVFNLAMACTVESPEQRINAKEIVTKLLKI 142
            V+ L  AC   +P  R +  EI      +
Sbjct: 240 KVYELMRACWQWNPSDRPSFAEIHQAFETM 269

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 44.2 bits (105), Expect = 4e-06
 Identities = 30/155 (19%), Positives = 59/155 (38%), Gaps = 22/155 (14%)

Query: 1   MVAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
             A +SDF ++K L  +D     ++     + + APE     + S+  DV+S+G+ + E 
Sbjct: 147 HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEA 206

Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
            + G+KP  ++   E               M  ++      +        +C   ++ L 
Sbjct: 207 LSYGQKPYKKMKGPE--------------VMAFIE------QGKRMECPPECPPELYALM 246

Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGR 153
             C +   E R +   +  ++     SL   V G 
Sbjct: 247 SDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGH 281

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 44.1 bits (105), Expect = 4e-06
 Identities = 30/148 (20%), Positives = 63/148 (42%), Gaps = 36/148 (24%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           +SDF + + +  +DQ ++   T   + + APE     + S+  DV++FGI++ E F+ GK
Sbjct: 145 VSDFGMTRYVL-DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGK 203

Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCVSFVFN 116
            P D   N E+                           +  V++             ++ 
Sbjct: 204 MPYDLYTNSEV---------------------------VLKVSQGHRLYRPHLASDTIYQ 236

Query: 117 LAMACTVESPEQRINAKEIVTKLLKIRD 144
           +  +C  E PE+R   +++++ +  +R+
Sbjct: 237 IMYSCWHELPEKRPTFQQLLSSIEPLRE 264

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 43.8 bits (104), Expect = 5e-06
 Identities = 29/153 (18%), Positives = 54/153 (35%), Gaps = 37/153 (24%)

Query: 6   SDFSIAKLLTGED--QSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
           +DF +A+ +   +             + + A E  +  R +   DV+SFG++L E  T G
Sbjct: 166 ADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRG 225

Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCVSFVF 115
             P   I   ++                            HF+A+       E C   ++
Sbjct: 226 APPYRHIDPFDL---------------------------THFLAQGRRLPQPEYCPDSLY 258

Query: 116 NLAMACTVESPEQRINAKEIVTKLLKIRDSLLR 148
            +   C    P  R   + +V ++ +I  +LL 
Sbjct: 259 QVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 43.8 bits (104), Expect = 6e-06
 Identities = 27/149 (18%), Positives = 51/149 (34%), Gaps = 36/149 (24%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           L DF +++ +  +      ++    I +MAPE     R ++  DV+ FG+ + E    G 
Sbjct: 157 LGDFGLSRYME-DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 215

Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCVSFVFN 116
           KP   + N ++                           I  +           C   +++
Sbjct: 216 KPFQGVKNNDV---------------------------IGRIENGERLPMPPNCPPTLYS 248

Query: 117 LAMACTVESPEQRINAKEIVTKLLKIRDS 145
           L   C    P +R    E+  +L  I + 
Sbjct: 249 LMTKCWAYDPSRRPRFTELKAQLSTILEE 277

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 43.4 bits (103), Expect = 7e-06
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)

Query: 6   SDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKK 64
           +DF +A+L+  +++   +      I + APE    G  +   DV+SFGI+L E  T G+ 
Sbjct: 151 ADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRI 209

Query: 65  PTDEIFNEE 73
           P   + N E
Sbjct: 210 PYPGMTNPE 218

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 43.4 bits (103), Expect = 8e-06
 Identities = 26/138 (18%), Positives = 51/138 (36%), Gaps = 20/138 (14%)

Query: 6   SDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKK 64
            DF +A+ +  +   + +      + +MAPE       +   DV+S+GI L E F+ G  
Sbjct: 187 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 246

Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
           P   +  +    K             + +   +          E   + ++++   C   
Sbjct: 247 PYPGMPVDSKFYKM------------IKEGFRMLS-------PEHAPAEMYDIMKTCWDA 287

Query: 125 SPEQRINAKEIVTKLLKI 142
            P +R   K+IV  + K 
Sbjct: 288 DPLKRPTFKQIVQLIEKQ 305

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 43.4 bits (102), Expect = 8e-06
 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            V  + DF +A+ +  +   + +      + +MAPE   +   +   DV+SFG++L E F
Sbjct: 230 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 289

Query: 61  T-GKKP 65
           + G  P
Sbjct: 290 SLGASP 295

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 43.4 bits (103), Expect = 9e-06
 Identities = 25/156 (16%), Positives = 58/156 (37%), Gaps = 37/156 (23%)

Query: 1   MVAHLSDFSIAKLLTGED--QSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLME 58
               ++DF +A+ +  ++      +T     + +MA E  +  + +   DV+SFG++L E
Sbjct: 165 FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 224

Query: 59  TFT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQC 110
             T G  P  ++   ++                             ++ +       E C
Sbjct: 225 LMTRGAPPYPDVNTFDI---------------------------TVYLLQGRRLLQPEYC 257

Query: 111 VSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL 146
              ++ + + C     E R +  E+V+++  I  + 
Sbjct: 258 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 43.4 bits (103), Expect = 9e-06
 Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 4/76 (5%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLAT--IGYMAPEYGREGRVSANGDVYSFGIMLME 58
             A +SDF ++K L   D++  + QT     + + APE     + S+  DV+SFG+++ E
Sbjct: 154 HYAKISDFGLSKAL-RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 212

Query: 59  TFT-GKKPTDEIFNEE 73
            F+ G+KP   +   E
Sbjct: 213 AFSYGQKPYRGMKGSE 228

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 20/143 (13%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            VA + DF +A+ +  +   + +      + +MAPE   +   +   DV+S+GI+L E F
Sbjct: 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIF 260

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           + G  P   I       K             V D   ++Q              ++++  
Sbjct: 261 SLGLNPYPGILVNSKFYKL------------VKDGYQMAQ-------PAFAPKNIYSIMQ 301

Query: 120 ACTVESPEQRINAKEIVTKLLKI 142
           AC    P  R   ++I + L + 
Sbjct: 302 ACWALEPTHRPTFQQICSFLQEQ 324

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 26/148 (17%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            VA +SDF + K     + S TQ      + + APE  RE + S   DV+SFGI+L E +
Sbjct: 326 NVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 380

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           + G+ P   I  ++               +  V+      +     A + C   V+++  
Sbjct: 381 SFGRVPYPRIPLKD--------------VVPRVE------KGYKMDAPDGCPPAVYDVMK 420

Query: 120 ACTVESPEQRINAKEIVTKLLKIRDSLL 147
            C       R    ++  +L  IR   L
Sbjct: 421 NCWHLDAATRPTFLQLREQLEHIRTHEL 448

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 20/73 (27%)

Query: 3   AHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPE---------YGREGRVSANGDVYSF 52
            H++DF+IA +L  E    TQ  T+A T  YMAPE         Y     V    D +S 
Sbjct: 154 VHITDFNIAAMLPRE----TQITTMAGTKPYMAPEMFSSRKGAGYSFA--V----DWWSL 203

Query: 53  GIMLMETFTGKKP 65
           G+   E   G++P
Sbjct: 204 GVTAYELLRGRRP 216

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 6/64 (9%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANG--DVYSFGIMLMETFT 61
           +SDF  +K L G       T+T   T+ YMAPE   +G        D++S G  ++E  T
Sbjct: 164 ISDFGTSKRLAG---INPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMAT 220

Query: 62  GKKP 65
           GK P
Sbjct: 221 GKPP 224

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 42.3 bits (100), Expect = 2e-05
 Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 36/147 (24%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQ-TLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
           +SDF ++++L  + ++   T      I + APE     + ++  DV+SFGI++ E  T G
Sbjct: 188 VSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYG 247

Query: 63  KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCVSFVF 115
           ++P  E+ N                            E +  +           C S ++
Sbjct: 248 ERPYWELSN---------------------------HEVMKAINDGFRLPTPMDCPSAIY 280

Query: 116 NLAMACTVESPEQRINAKEIVTKLLKI 142
            L M C  +   +R    +IV+ L K+
Sbjct: 281 QLMMQCWQQERARRPKFADIVSILDKL 307

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 42.0 bits (99), Expect = 2e-05
 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 2/61 (3%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           L DF IA++L      + +     T  Y++PE       +   D+++ G +L E  T K 
Sbjct: 166 LGDFGIARVLN-STVELARACI-GTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKH 223

Query: 65  P 65
            
Sbjct: 224 A 224

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 26/143 (18%), Positives = 53/143 (37%), Gaps = 20/143 (13%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            V  + DF +A+ +  +   + +      + +MAPE   +   +   DV+SFG++L E F
Sbjct: 185 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           + G  P   +  +E   +             + +   +          +     ++   +
Sbjct: 245 SLGASPYPGVKIDEEFCRR------------LKEGTRMRA-------PDYTTPEMYQTML 285

Query: 120 ACTVESPEQRINAKEIVTKLLKI 142
            C    P QR    E+V  L  +
Sbjct: 286 DCWHGEPSQRPTFSELVEHLGNL 308

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 41.8 bits (99), Expect = 3e-05
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
           L DF +++ +  ED       T   I +M+PE     R +   DV+ F + + E  + GK
Sbjct: 154 LGDFGLSRYIEDEDYYKAS-VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGK 212

Query: 64  KPTDEIFNEE 73
           +P   + N++
Sbjct: 213 QPFFWLENKD 222

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 41.7 bits (98), Expect = 3e-05
 Identities = 24/142 (16%), Positives = 44/142 (30%), Gaps = 28/142 (19%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSANG-------DVYSFGIM 55
           +SDF + K L     S          T G+ APE   E              D++S G +
Sbjct: 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228

Query: 56  LMETFTGKKP--TDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF 113
                +  K    D+   E   ++   +    +  M+ +    L  E    +++      
Sbjct: 229 FYYILSKGKHPFGDKYSRESNIIRGIFS----LDEMKCLHDRSLIAEATDLISQ------ 278

Query: 114 VFNLAMACTVESPEQRINAKEI 135
                       P +R  A ++
Sbjct: 279 -------MIDHDPLKRPTAMKV 293

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 1   MVAHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  +SDF ++++L    D + T T     I + APE       S+  DV+SFG+++ E 
Sbjct: 188 LVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV 247

Query: 60  FT-GKKPTDEIFNEE 73
              G++P   + N +
Sbjct: 248 LAYGERPYWNMTNRD 262

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 41.0 bits (97), Expect = 4e-05
 Identities = 34/152 (22%), Positives = 57/152 (37%), Gaps = 40/152 (26%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           VA +SDF + K     + S TQ      + + APE  RE + S   DV+SFGI+L E ++
Sbjct: 155 VAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209

Query: 62  -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-------EQCVSF 113
            G+ P   I  +++                           +  V K       + C   
Sbjct: 210 FGRVPYPRIPLKDV---------------------------VPRVEKGYKMDAPDGCPPA 242

Query: 114 VFNLAMACTVESPEQRINAKEIVTKLLKIRDS 145
           V+ +   C       R +  ++  +L  I+  
Sbjct: 243 VYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 41.1 bits (97), Expect = 5e-05
 Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 20/138 (14%)

Query: 6   SDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKK 64
            DF +A+ +  +   + +      + +MAPE   EG  +   DV+S+GI+L E F+ G  
Sbjct: 214 CDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN 273

Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
           P   I  +    K             + +   + Q              ++ +  +C   
Sbjct: 274 PYPGIPVDANFYKL------------IQNGFKMDQ-------PFYATEEIYIIMQSCWAF 314

Query: 125 SPEQRINAKEIVTKLLKI 142
              +R +   + + L   
Sbjct: 315 DSRKRPSFPNLTSFLGCQ 332

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 40.7 bits (96), Expect = 6e-05
 Identities = 28/137 (20%), Positives = 45/137 (32%), Gaps = 40/137 (29%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE------YGREGRVSANGDVYSFGIMLME 58
           + DF +   L  + +      TL    YM+PE      YG+E       D+Y+ G++L E
Sbjct: 163 IGDFGLVTSLKNDGKRTRSKGTLR---YMSPEQISSQDYGKEV------DLYALGLILAE 213

Query: 59  TFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
                    E       L+        IS +         +++   + K           
Sbjct: 214 LLHVCDTAFETSKFFTDLRD-----GIISDI-------FDKKEKTLLQK----------- 250

Query: 119 MACTVESPEQRINAKEI 135
                + PE R N  EI
Sbjct: 251 --LLSKKPEDRPNTSEI 265

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 40.7 bits (96), Expect = 7e-05
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           L DF +A++L   D S  +T  + T  YM+PE       +   D++S G +L E      
Sbjct: 157 LGDFGLARILN-HDTSFAKTF-VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP 214

Query: 65  P 65
           P
Sbjct: 215 P 215

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 40.4 bits (95), Expect = 8e-05
 Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           L D  + +  + +  +   +    T  YM+PE   E   +   D++S G +L E    + 
Sbjct: 177 LGDLGLGRFFSSKT-TAAHSLV-GTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS 234

Query: 65  P 65
           P
Sbjct: 235 P 235

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 40.3 bits (95), Expect = 9e-05
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 8/75 (10%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMET 59
               LSD  I+  +    + + Q      I ++ PE     +  +   D +SFG  L E 
Sbjct: 158 PFIKLSDPGISITV--LPKDILQ----ERIPWVPPECIENPKNLNLATDKWSFGTTLWEI 211

Query: 60  FT-GKKPTDEIFNEE 73
            + G KP   + ++ 
Sbjct: 212 CSGGDKPLSALDSQR 226

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 40.3 bits (94), Expect = 1e-04
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 7/63 (11%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPE-YGREGRVSANGDVYSFGIMLMETFTG 62
           +SD  +A   + +     +      T GYMAPE   +     ++ D +S G ML +   G
Sbjct: 333 ISDLGLACDFSKK-----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387

Query: 63  KKP 65
             P
Sbjct: 388 HSP 390

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 39.2 bits (92), Expect = 3e-04
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 6/62 (9%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGK 63
           L DF +   L     +    +       YMAPE  +    +A  DV+S G+ ++E     
Sbjct: 198 LGDFGLLVELG----TAGAGEVQEGDPRYMAPELLQGSYGTA-ADVFSLGLTILEVACNM 252

Query: 64  KP 65
           + 
Sbjct: 253 EL 254

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 9/79 (11%), Positives = 19/79 (24%), Gaps = 12/79 (15%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE------YGREGRVSANGDVYSFGIMLME 58
           L D   +  +    +    T    T G+   E      +  +       D +     +  
Sbjct: 224 LIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQ------IDYFGVAATVYC 277

Query: 59  TFTGKKPTDEIFNEEMTLK 77
              G     +    E   +
Sbjct: 278 MLFGTYMKVKNEGGECKPE 296

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 38.2 bits (89), Expect = 6e-04
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGK 63
           +SD  +A  L       T+T+  A T G+MAPE         + D ++ G+ L E    +
Sbjct: 330 ISDLGLAVELKAGQ---TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386

Query: 64  KP 65
            P
Sbjct: 387 GP 388

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 37.7 bits (87), Expect = 8e-04
 Identities = 10/72 (13%), Positives = 24/72 (33%), Gaps = 17/72 (23%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY-----------GREGRVSANGDVYSFG 53
           L+ F         D +   +    + G+  PE             R   ++ + D ++ G
Sbjct: 247 LTGFEHLV----RDGARVVSSV--SRGFEPPELEARRATISYHRDRRTLMTFSFDAWALG 300

Query: 54  IMLMETFTGKKP 65
           +++   +    P
Sbjct: 301 LVIYWIWCADLP 312

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	161
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.96
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.96
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.96
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.95
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.95
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.95
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.94
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.94
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.93
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.93
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.93
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.93
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.92
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.91
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.91
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.91
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.9
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.9
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.89
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.89
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.89
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.89
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.88
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.88
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.88
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.88
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.87
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.87
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.87
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.87
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.87
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.87
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.87
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.87
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.87
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.87
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.87
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.87
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.87
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.86
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.86
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.86
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.86
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.86
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.86
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.86
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.86
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.86
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.86
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.86
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.86
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.86
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.86
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.86
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.86
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.86
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.86
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.86
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.86
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.86
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.85
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.85
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.85
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.85
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.85
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.85
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.85
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.85
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.85
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.85
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.85
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.85
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.85
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.85
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.85
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.85
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.85
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.85
3niz_A	311	Rhodanese family protein; structural genomics, str	99.85
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.84
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.84
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.84
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.84
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.84
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.84
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.84
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.84
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.84
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.84
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.84
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.84
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.84
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.84
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.84
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.84
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.84
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.84
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.84
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.84
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.84
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.84
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.84
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.84
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.84
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.84
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.84
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.84
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.84
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.84
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.84
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.84
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.83
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.83
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.83
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.83
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.83
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.83
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.83
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.83
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.83
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.83
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.83
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.83
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.83
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.83
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.83
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.83
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.83
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.83
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.83
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.83
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.83
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.83
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.83
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.83
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.83
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.83
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.83
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.83
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.83
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.83
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.83
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.83
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.82
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.82
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.82
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.82
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.82
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.82
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.82
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.82
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.82
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.82
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.82
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.82
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.82
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.82
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.82
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.82
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.82
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.82
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.82
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.82
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.82
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.82
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.82
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.82
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.82
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.82
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.82
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.81
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.81
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.81
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.81
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.81
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.81
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.81
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.81
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.81
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.81
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.81
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.81
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.81
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.81
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.81
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.81
3bhy_A	283	Death-associated protein kinase 3; death associate	99.81
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.81
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.81
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.81
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.81
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.81
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.81
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.8
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.8
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.8
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.8
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.8
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.8
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.8
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.8
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.8
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.8
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.8
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.8
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.8
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.8
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.8
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.8
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.8
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.79
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.79
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.79
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.79
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.79
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.79
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.79
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.79
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.79
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.79
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.79
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.79
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.79
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.79
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.79
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.79
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.78
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.78
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.78
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.78
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.78
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.78
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.78
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.78
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.77
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.77
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.77
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.77
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.77
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.77
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.76
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.76
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.76
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.75
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.74
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.68
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.64
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.5
3uqc_A	286	Probable conserved transmembrane protein; structur	99.36
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.43
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	97.83

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.96  E-value=1.3e-30  Score=181.35  Aligned_cols=125  Identities=22%  Similarity=0.355  Sum_probs=94.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      ++||+|||+|+.+.............||+.|+|||++.+..|+.++||||||+++||+++ |+.||.+...... +....
T Consensus       223 ~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~-~~~~i  301 (353)
T 4ase_A          223 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRL  301 (353)
T ss_dssp             CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-HHHHH
T ss_pred             CEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH-HHHHH
Confidence            689999999998754444444456789999999999998899999999999999999998 8999976443222 11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      ......                  ..+..+++++.+|+.+||+.||++|||+.++++||..+.+.
T Consensus       302 ~~g~~~------------------~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~  348 (353)
T 4ase_A          302 KEGTRM------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  348 (353)
T ss_dssp             HHTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HcCCCC------------------CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence            111100                  01123345688999999999999999999999999998764

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.96  E-value=2.3e-30  Score=176.90  Aligned_cols=129  Identities=24%  Similarity=0.323  Sum_probs=86.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC---CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE---GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~---~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      ++||+|||+|+..............+||+.|+|||++.+   ..|+.++||||||+++||+++|+.||.+..........
T Consensus       170 ~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~  249 (307)
T 3omv_A          170 TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM  249 (307)
T ss_dssp             EEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH
T ss_pred             cEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHH
Confidence            689999999987643322333345789999999999854   34899999999999999999999999765433221111


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      ...........               .....++..+.+|+.+||+.||++|||+.+++.+|+.++..
T Consensus       250 ~~~~~~~p~~~---------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~  301 (307)
T 3omv_A          250 VGRGYASPDLS---------------KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS  301 (307)
T ss_dssp             HHTTCCCCCST---------------TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred             HhcCCCCCCcc---------------cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence            11111110000               01223455688999999999999999999999999887643

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.96  E-value=2.5e-30  Score=178.58  Aligned_cols=125  Identities=25%  Similarity=0.433  Sum_probs=84.9

Q ss_pred             CceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      +++||+|||+|+.+.............||+.|+|||++.+..|+.++||||||+++||+++ |+.||.......  +...
T Consensus       195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~--~~~~  272 (329)
T 4aoj_A          195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE--AIDC  272 (329)
T ss_dssp             TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH--HHHH
T ss_pred             CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH--HHHH
Confidence            4689999999987644333333345679999999999999999999999999999999998 899997643321  1111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      .....+                  ...+..+++++.+|+.+||+.||++|||++||+.+|+.+.+.
T Consensus       273 i~~g~~------------------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          273 ITQGRE------------------LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             HHHTCC------------------CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHcCCC------------------CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence            111110                  001223445688999999999999999999999999998764

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.96  E-value=1.3e-30  Score=178.53  Aligned_cols=122  Identities=25%  Similarity=0.439  Sum_probs=91.2

Q ss_pred             CceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      +++||+|||+|+.+.............||+.|+|||++.+..|+.++||||||+++||+++ |..||.+.....  +...
T Consensus       182 ~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~--~~~~  259 (308)
T 4gt4_A          182 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD--VVEM  259 (308)
T ss_dssp             GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH--HHHH
T ss_pred             CCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH--HHHH
Confidence            3689999999987644333333445689999999999998899999999999999999998 899997654321  1111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ......                  .+.+..++..+.+|+.+||+.||++|||+.+|+.+|+++
T Consensus       260 i~~~~~------------------~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          260 IRNRQV------------------LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             HHTTCC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHcCCC------------------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            111100                  011233455688999999999999999999999999875

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.95  E-value=4.9e-30  Score=175.04  Aligned_cols=124  Identities=26%  Similarity=0.417  Sum_probs=91.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      ++||+|||+|+...............||+.|+|||++.+..|+.++||||||+++||+++ |+.||.......  +....
T Consensus       166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~--~~~~i  243 (299)
T 4asz_A          166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--VIECI  243 (299)
T ss_dssp             CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHHHH
T ss_pred             cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHH
Confidence            689999999987643333223344579999999999998899999999999999999998 899997643321  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      .....                  ...+..++.++.+|+.+||+.||++|||+++++..|+.+.+.
T Consensus       244 ~~~~~------------------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          244 TQGRV------------------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             HHTCC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HcCCC------------------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            11100                  001123445688999999999999999999999999887653

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.95  E-value=5.4e-29  Score=171.79  Aligned_cols=129  Identities=22%  Similarity=0.207  Sum_probs=92.0

Q ss_pred             ceeeecccccccccCCCCc---cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQS---MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~---~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||+|+.+......   ......+||+.|+|||++.+..|+.++||||+||++|||++|+.||.......... .
T Consensus       189 ~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~-~  267 (336)
T 4g3f_A          189 RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCL-K  267 (336)
T ss_dssp             CEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHH-H
T ss_pred             EEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHH-H
Confidence            4899999999986432221   12234679999999999999899999999999999999999999997644332211 1


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhh
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR  148 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~  148 (161)
                      ......+                 ....+..+++.+.+|+.+||+.||.+|||+.|++++|....++...
T Consensus       268 i~~~~~~-----------------~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~  320 (336)
T 4g3f_A          268 IASEPPP-----------------IREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGG  320 (336)
T ss_dssp             HHHSCCG-----------------GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTS
T ss_pred             HHcCCCC-----------------chhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhh
Confidence            1110000                 0001233456688999999999999999999999999998876543

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.95  E-value=1.3e-28  Score=167.12  Aligned_cols=114  Identities=21%  Similarity=0.350  Sum_probs=82.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+|+....    ......+||+.|+|||++.+ .|+.++||||+||++|||++|+.||...............
T Consensus       170 ~vKl~DFGla~~~~~----~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~  244 (290)
T 3fpq_A          170 SVKIGDLGLATLKRA----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS  244 (290)
T ss_dssp             CEEECCTTGGGGCCT----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT
T ss_pred             CEEEEeCcCCEeCCC----CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHc
Confidence            589999999986422    22345789999999998864 6999999999999999999999999654332211111110


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...+                  ...+...++++.+|+.+||+.||++|||++|+++|
T Consensus       245 ~~~~------------------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H  283 (290)
T 3fpq_A          245 GVKP------------------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  283 (290)
T ss_dssp             TCCC------------------GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CCCC------------------CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            0000                  00011223458899999999999999999999987

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.94  E-value=1e-28  Score=169.13  Aligned_cols=137  Identities=13%  Similarity=0.150  Sum_probs=87.5

Q ss_pred             CceeeecccccccccCCCCc--cccccccccccccCCCCCCCC------CCCCCccchhhhHHHHHHHhcCCCCcccccc
Q 043981            1 MVAHLSDFSIAKLLTGEDQS--MTQTQTLATIGYMAPEYGREG------RVSANGDVYSFGIMLMETFTGKKPTDEIFNE   72 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~--~~~~~~~g~~~~~~Pe~~~~~------~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~   72 (161)
                      +++||+|||+|+........  ......+||+.|+|||++.+.      .++.++||||||+++||+++|..|+......
T Consensus       145 ~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~  224 (303)
T 3hmm_A          145 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY  224 (303)
T ss_dssp             SCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCC
T ss_pred             CCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccc
Confidence            36899999999876443222  122346899999999998654      3677899999999999999998876543322


Q ss_pred             ccchh----------HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           73 EMTLK----------HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        73 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ...+.          .........    ...+...     .......+...+.+|+.+||+.||++|||+.++++.|+++
T Consensus       225 ~~p~~~~~~~~~~~~~~~~~~~~~----~~rp~~p-----~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l  295 (303)
T 3hmm_A          225 QLPYYDLVPSDPSVEEMRKVVCEQ----KLRPNIP-----NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  295 (303)
T ss_dssp             CCTTTTTSCSSCCHHHHHHHHTTS----CCCCCCC-----GGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred             cccchhcccccchHHHHHHHHhcc----cCCCCCC-----ccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence            11111          000000000    0000000     0011234556788999999999999999999999999998


Q ss_pred             HHHh
Q 043981          143 RDSL  146 (161)
Q Consensus       143 ~~~~  146 (161)
                      .++.
T Consensus       296 ~~~~  299 (303)
T 3hmm_A          296 SQQE  299 (303)
T ss_dssp             HHC-
T ss_pred             HHHc
Confidence            7653

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.94  E-value=4.6e-28  Score=167.66  Aligned_cols=119  Identities=23%  Similarity=0.254  Sum_probs=87.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+|+.+....  ......+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+.....  ......
T Consensus       208 ~vKl~DFGla~~~~~~~--~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~~~i~  283 (346)
T 4fih_A          208 RVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AMKMIR  283 (346)
T ss_dssp             CEEECCCTTCEECCSSS--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHH
T ss_pred             CEEEecCcCceecCCCC--CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HHHHHH
Confidence            58999999998864322  23455789999999999998889999999999999999999999997643221  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ...+...                ......++++.+|+.+||+.||++|||++|+++|=+
T Consensus       284 ~~~~~~~----------------~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~  326 (346)
T 4fih_A          284 DNLPPRL----------------KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF  326 (346)
T ss_dssp             HSSCCCC----------------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGG
T ss_pred             cCCCCCC----------------CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHh
Confidence            1111000                001223456889999999999999999999998843

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.93  E-value=3.4e-28  Score=168.55  Aligned_cols=116  Identities=19%  Similarity=0.247  Sum_probs=85.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+|+.+...  .......+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+...... +.....
T Consensus       163 ~vKl~DFGla~~~~~~--~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~-~~~i~~  239 (350)
T 4b9d_A          163 TVQLGDFGIARVLNST--VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL-VLKIIS  239 (350)
T ss_dssp             CEEECSTTEESCCCHH--HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHH
T ss_pred             CEEEcccccceeecCC--cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHHHHc
Confidence            5899999999876321  1123456899999999999998999999999999999999999999976433221 111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ...+.                   .+...+.++.+|+.+||+.||++|||++|+++|-
T Consensus       240 ~~~~~-------------------~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp  278 (350)
T 4b9d_A          240 GSFPP-------------------VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKG  278 (350)
T ss_dssp             TCCCC-------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSH
T ss_pred             CCCCC-------------------CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence            10000                   0112344588999999999999999999999873

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.93  E-value=2.3e-27  Score=167.90  Aligned_cols=119  Identities=23%  Similarity=0.255  Sum_probs=86.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+|+.+....  ......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.....  ......
T Consensus       285 ~vKl~DFGla~~~~~~~--~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~~~i~  360 (423)
T 4fie_A          285 RVKLSDFGFCAQVSKEV--PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AMKMIR  360 (423)
T ss_dssp             CEEECCCTTCEECCSSC--CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHH
T ss_pred             CEEEecCccceECCCCC--ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HHHHHH
Confidence            58999999998864322  23455789999999999998899999999999999999999999997643221  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ...+....                .....+..+.+|+.+||+.||++|||+.|+++|=+
T Consensus       361 ~~~~~~~~----------------~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~  403 (423)
T 4fie_A          361 DNLPPRLK----------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF  403 (423)
T ss_dssp             HSCCCCCS----------------CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGG
T ss_pred             cCCCCCCc----------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHH
Confidence            11110000                01123445889999999999999999999998743

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.93  E-value=1.8e-27  Score=162.53  Aligned_cols=116  Identities=17%  Similarity=0.221  Sum_probs=85.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+|+.+............+||+.|+|||++.+..|+.++||||+||++|+|++|..||.+.....  +.....
T Consensus       170 ~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~~~i~  247 (311)
T 4aw0_A          170 HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL--IFAKII  247 (311)
T ss_dssp             CEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH
T ss_pred             CEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHH
Confidence            589999999998754433334556789999999999998889999999999999999999999997643221  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .... ..                  +...++++.+|+.+||+.||++|||++|++.|
T Consensus       248 ~~~~-~~------------------p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~  285 (311)
T 4aw0_A          248 KLEY-DF------------------PEKFFPKARDLVEKLLVLDATKRLGCEEMEGY  285 (311)
T ss_dssp             HTCC-CC------------------CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred             cCCC-CC------------------CcccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence            1100 00                  11123458899999999999999999987654

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.93  E-value=8.6e-27  Score=157.03  Aligned_cols=115  Identities=18%  Similarity=0.197  Sum_probs=75.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCC-CCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~-~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+|+.....   ......+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.+....  .+....
T Consensus       150 ~vkl~DFGla~~~~~~---~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~--~~~~~i  224 (275)
T 3hyh_A          150 NVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLFKNI  224 (275)
T ss_dssp             CEEECCSSCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHH
T ss_pred             CEEEeecCCCeecCCC---CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH--HHHHHH
Confidence            5899999999875322   22345789999999999988776 57899999999999999999999753221  111111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ...... .                  +...++.+.+|+.+||+.||++|||++|+++|=+
T Consensus       225 ~~~~~~-~------------------p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw  265 (275)
T 3hyh_A          225 SNGVYT-L------------------PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW  265 (275)
T ss_dssp             HHTCCC-C------------------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHH
T ss_pred             HcCCCC-C------------------CCCCCHHHHHHHHHHccCChhHCcCHHHHHcCcc
Confidence            111000 0                  1122345889999999999999999999999754

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.92  E-value=1.3e-26  Score=158.19  Aligned_cols=114  Identities=22%  Similarity=0.251  Sum_probs=81.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+|+......  ......+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+......  .....
T Consensus       164 ~vKl~DFGla~~~~~~~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~--~~~i~  239 (304)
T 3ubd_A          164 HIKLTDFGLSKESIDHE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET--MTMIL  239 (304)
T ss_dssp             CEEEESSEEEEC-------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH
T ss_pred             CEEecccccceeccCCC--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHH--HHHHH
Confidence            58999999998753322  223457899999999999988999999999999999999999999976433211  11111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH-----HHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA-----KEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~-----~~vl~~  138 (161)
                      ..... .                  +...++++.+|+.+||+.||++|||+     +|+++|
T Consensus       240 ~~~~~-~------------------p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H  282 (304)
T 3ubd_A          240 KAKLG-M------------------PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH  282 (304)
T ss_dssp             HCCCC-C------------------CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred             cCCCC-C------------------CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence            10000 0                  11234558899999999999999985     677776

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.91  E-value=1.1e-25  Score=157.26  Aligned_cols=137  Identities=18%  Similarity=0.209  Sum_probs=81.9

Q ss_pred             ceeeecccccccccCCCCc--------------------------cccccccccccccCCCCCCCCC-CCCCccchhhhH
Q 043981            2 VAHLSDFSIAKLLTGEDQS--------------------------MTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGI   54 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~--------------------------~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~   54 (161)
                      .+||+|||+|+........                          ......+||+.|+|||++.+.. |+.++||||+||
T Consensus       156 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~  235 (361)
T 4f9c_A          156 KYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGV  235 (361)
T ss_dssp             EEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHH
T ss_pred             eEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHH
Confidence            4799999999865322110                          0123357999999999987754 899999999999


Q ss_pred             HHHHHHhcCCCCccccccccchhHHhhhh------------c---------CC-CCccccc---------ccccc---ch
Q 043981           55 MLMETFTGKKPTDEIFNEEMTLKHWVNDW------------L---------PI-STMEVVD---------VNLLS---QE  100 (161)
Q Consensus        55 il~e~~~g~~p~~~~~~~~~~~~~~~~~~------------~---------~~-~~~~~~~---------~~~~~---~~  100 (161)
                      ++++|++|+.||.....+...+.......            .         +. .......         +....   ..
T Consensus       236 il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~  315 (361)
T 4f9c_A          236 IFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGH  315 (361)
T ss_dssp             HHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------
T ss_pred             HHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccc
Confidence            99999999999965444322211110000            0         00 0000000         00000   00


Q ss_pred             hhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981          101 DIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus       101 ~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ..........++++++|+.+||++||++|+|++|+++|
T Consensus       316 ~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~H  353 (361)
T 4f9c_A          316 ATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLH  353 (361)
T ss_dssp             ------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred             cccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            00000012234568899999999999999999999987

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.91  E-value=1e-25  Score=153.83  Aligned_cols=115  Identities=21%  Similarity=0.297  Sum_probs=72.9

Q ss_pred             ceeeecccccccccCCCCc----------cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQS----------MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFN   71 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~----------~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~   71 (161)
                      ++||+|||+|+.+......          ......+||+.|+|||++.+..|+.++||||+||++|||++   ||.....
T Consensus       156 ~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~  232 (299)
T 4g31_A          156 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME  232 (299)
T ss_dssp             CEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH
T ss_pred             cEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH
Confidence            5899999999886432221          11234679999999999999899999999999999999995   6654221


Q ss_pred             cccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           72 EEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ....+... .   ...              . .+......+...+|+.+||+.||++|||+.|+++|
T Consensus       233 ~~~~~~~~-~---~~~--------------~-p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h  280 (299)
T 4g31_A          233 RVRTLTDV-R---NLK--------------F-PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN  280 (299)
T ss_dssp             HHHHHHHH-H---TTC--------------C-CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             HHHHHHHH-h---cCC--------------C-CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            11111100 0   000              0 01122334556789999999999999999999986

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.91  E-value=1.3e-25  Score=158.59  Aligned_cols=138  Identities=17%  Similarity=0.110  Sum_probs=85.0

Q ss_pred             ceeeecccccccccCCCC--ccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccch-h
Q 043981            2 VAHLSDFSIAKLLTGEDQ--SMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL-K   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~--~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~-~   77 (161)
                      .+||+|||+|+.+.....  .......+||+.|+|||++.+.. ++.++||||+||+++||++|+.||.+........ .
T Consensus       196 ~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I  275 (398)
T 4b99_A          196 ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLI  275 (398)
T ss_dssp             CEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHH
T ss_pred             CEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            589999999987643211  12334578999999999987754 6899999999999999999999997754322211 1


Q ss_pred             HHhhhhcCCCCcccccc--------ccccchhhhh-hhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           78 HWVNDWLPISTMEVVDV--------NLLSQEDIHF-VAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        78 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ......++.........        .......... ......+.++.+|+.+||.+||.+|||++|+++|=
T Consensus       276 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp  346 (398)
T 4b99_A          276 MMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHP  346 (398)
T ss_dssp             HHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSG
T ss_pred             HHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCH
Confidence            11111111000000000        0000000000 00112345689999999999999999999999884

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.90  E-value=3e-25  Score=163.25  Aligned_cols=117  Identities=18%  Similarity=0.181  Sum_probs=85.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+|+.+...   ......+||+.|+|||++.+..|+.++||||+||++|+|++|..||.+...... +. ...
T Consensus       295 ~vKl~DFG~a~~~~~~---~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~-~~-~i~  369 (573)
T 3uto_A          295 ELKLIDFGLTAHLDPK---QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET-LR-NVK  369 (573)
T ss_dssp             CEEECCCSSCEECCTT---SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HH-HHH
T ss_pred             CEEEeeccceeEccCC---CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HH-HHH
Confidence            4799999999987432   223456899999999999999999999999999999999999999976433221 11 111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .... ..              ........+..+.+|+.+||+.||.+|||+.|+++|
T Consensus       370 ~~~~-~~--------------~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H  411 (573)
T 3uto_A          370 SCDW-NM--------------DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  411 (573)
T ss_dssp             TTCC-CC--------------CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             hCCC-CC--------------CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            0000 00              000112234558899999999999999999999987

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.90  E-value=1.1e-24  Score=150.46  Aligned_cols=143  Identities=18%  Similarity=0.177  Sum_probs=92.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-----CCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-----RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-----~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||+++.+.............||+.|+|||++.+.     .++.++||||+|++++++++|+.||..........
T Consensus       169 ~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~  248 (322)
T 3soc_A          169 TACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLP  248 (322)
T ss_dssp             CEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCT
T ss_pred             eEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccc
Confidence            5899999999876543333333446799999999998763     35667899999999999999999997654322211


Q ss_pred             hHHhhhhcCCCCccc---cccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           77 KHWVNDWLPISTMEV---VDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      ........+ .....   ...................+..+.+|+.+||+.||++|||+.++++.|+++.+.
T Consensus       249 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          249 FEEEIGQHP-SLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             THHHHCSSC-CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hhhhhccCC-chhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            100000000 00000   000000000001111234556799999999999999999999999999998764

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.89  E-value=2.7e-23  Score=143.31  Aligned_cols=138  Identities=29%  Similarity=0.410  Sum_probs=96.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccccc-chhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM-TLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~-~~~~~~   80 (161)
                      .+||+|||+++...............||+.|+|||++.+..++.++||||+|++++++++|+.||........ ....+.
T Consensus       177 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~  256 (321)
T 2qkw_B          177 VPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA  256 (321)
T ss_dssp             CEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHT
T ss_pred             CEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHh
Confidence            5899999999875432222223445689999999998888899999999999999999999999876544322 222222


Q ss_pred             hhhc-CCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           81 NDWL-PISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        81 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      .... ........+...      ........+..+.+++.+||+.||++|||+.+++++|+.+...
T Consensus       257 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~  316 (321)
T 2qkw_B          257 VESHNNGQLEQIVDPNL------ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL  316 (321)
T ss_dssp             HHHHTTTCCCSSSSSSC------TTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             hhccccccHHHhcChhh------ccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence            1111 111111111111      1112356677899999999999999999999999999998764

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.89  E-value=8.8e-23  Score=141.37  Aligned_cols=137  Identities=18%  Similarity=0.279  Sum_probs=89.5

Q ss_pred             ceeeecccccccccCCCCc--cccccccccccccCCCCCCCCCCCCC------ccchhhhHHHHHHHhc----------C
Q 043981            2 VAHLSDFSIAKLLTGEDQS--MTQTQTLATIGYMAPEYGREGRVSAN------GDVYSFGIMLMETFTG----------K   63 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~--~~~~~~~g~~~~~~Pe~~~~~~~~~~------~dv~s~g~il~e~~~g----------~   63 (161)
                      .+||+|||+++.+......  .......||+.|+|||++.+..+...      +||||+|+++|++++|          .
T Consensus       180 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~  259 (337)
T 3mdy_A          180 TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQ  259 (337)
T ss_dssp             CEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred             CEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccc
Confidence            5899999999876432221  11234579999999999887666665      8999999999999999          4


Q ss_pred             CCCccccccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        64 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                      .||.......................         ...........++..+.+|+.+||+.||.+|||+.+++++|+++.
T Consensus       260 ~p~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~  330 (337)
T 3mdy_A          260 LPYHDLVPSDPSYEDMREIVCIKKLR---------PSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS  330 (337)
T ss_dssp             CTTTTTSCSSCCHHHHHHHHTTSCCC---------CCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccHhhhcCCCCchhhhHHHHhhhccC---------ccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHH
Confidence            55544333222221111111100000         000001112466778999999999999999999999999999998


Q ss_pred             HHhh
Q 043981          144 DSLL  147 (161)
Q Consensus       144 ~~~~  147 (161)
                      ++..
T Consensus       331 ~~~~  334 (337)
T 3mdy_A          331 ESQD  334 (337)
T ss_dssp             HTTT
T ss_pred             hhcc
Confidence            7653

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.89  E-value=7.4e-24  Score=148.82  Aligned_cols=127  Identities=26%  Similarity=0.368  Sum_probs=91.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|++++ |..||.......  +....
T Consensus       241 ~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~--~~~~~  318 (370)
T 2psq_A          241 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFKLL  318 (370)
T ss_dssp             CEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHH
T ss_pred             CEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHH
Confidence            589999999987644333223334567889999999988889999999999999999998 999987643321  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR  148 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~  148 (161)
                      ......                  ..+..++..+.+++.+||+.||.+|||+.+++++|+++.+....
T Consensus       319 ~~~~~~------------------~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~~  368 (370)
T 2psq_A          319 KEGHRM------------------DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN  368 (370)
T ss_dssp             HTTCCC------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred             hcCCCC------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhcc
Confidence            111000                  00122344588999999999999999999999999999876543

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.88  E-value=1.1e-23  Score=155.86  Aligned_cols=115  Identities=18%  Similarity=0.271  Sum_probs=83.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCcccccccc-chhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM-TLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~-~~~~~   79 (161)
                      ++||+|||+|+.+...    .....+||+.|+|||++.. ..|+.++|+||+||++|||++|..||.+...... .+...
T Consensus       330 ~vKL~DFGlA~~~~~~----~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~  405 (689)
T 3v5w_A          330 HVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM  405 (689)
T ss_dssp             CEEECCCTTCEECSSC----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHH
T ss_pred             CEEecccceeeecCCC----CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Confidence            5899999999876432    2345789999999999864 5799999999999999999999999976443221 11111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCC-----HHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRIN-----AKEIVTKL  139 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~vl~~l  139 (161)
                      ..... ...                  +...++++.+|+.+||+.||.+|++     ++|++.|-
T Consensus       406 i~~~~-~~~------------------p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~Hp  451 (689)
T 3v5w_A          406 TLTMA-VEL------------------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP  451 (689)
T ss_dssp             HHHCC-CCC------------------CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSG
T ss_pred             hcCCC-CCC------------------CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCc
Confidence            11100 000                  1123455889999999999999998     68888774

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.88  E-value=1.6e-23  Score=146.38  Aligned_cols=126  Identities=21%  Similarity=0.348  Sum_probs=91.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.............||..|+|||++.+..++.++||||+|++++++++ |..||............ .
T Consensus       231 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-~  309 (359)
T 3vhe_A          231 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-L  309 (359)
T ss_dssp             CEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH-H
T ss_pred             cEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHH-H
Confidence            589999999987644333333445678899999999988889999999999999999998 99999764433221111 1


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      ........                  +...+..+.+++.+||+.||.+|||+.++++||+++.+..
T Consensus       310 ~~~~~~~~------------------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  357 (359)
T 3vhe_A          310 KEGTRMRA------------------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  357 (359)
T ss_dssp             HHTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HcCCCCCC------------------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence            11100000                  1122345889999999999999999999999999998753

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.88  E-value=6.9e-23  Score=139.89  Aligned_cols=132  Identities=19%  Similarity=0.258  Sum_probs=88.1

Q ss_pred             ceeeecccccccccCCCCc--cccccccccccccCCCCCCCC------CCCCCccchhhhHHHHHHHhc----------C
Q 043981            2 VAHLSDFSIAKLLTGEDQS--MTQTQTLATIGYMAPEYGREG------RVSANGDVYSFGIMLMETFTG----------K   63 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~--~~~~~~~g~~~~~~Pe~~~~~------~~~~~~dv~s~g~il~e~~~g----------~   63 (161)
                      .+||+|||+++........  .......||+.|+|||++.+.      .++.++||||+|++++++++|          .
T Consensus       151 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~  230 (301)
T 3q4u_A          151 QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK  230 (301)
T ss_dssp             CEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred             CEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccc
Confidence            5899999999876433221  112335799999999998765      344689999999999999999          7


Q ss_pred             CCCccccccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        64 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      .||..........................         .........+..+.+|+.+||+.||.+|||+.++++.|+++
T Consensus       231 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          231 PPFYDVVPNDPSFEDMRKVVCVDQQRPNI---------PNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             CTTTTTSCSSCCHHHHHHHHTTSCCCCCC---------CGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccccccCCCCcchhhhhHHHhccCCCCCC---------ChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            77765444333222221111100000000         00001234567799999999999999999999999999876

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.88  E-value=1.3e-23  Score=145.28  Aligned_cols=126  Identities=23%  Similarity=0.354  Sum_probs=89.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.............+|..|+|||++.+..++.++||||+|++++++++ |..||........  ....
T Consensus       155 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--~~~~  232 (327)
T 3poz_A          155 HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI--SSIL  232 (327)
T ss_dssp             EEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHHH
T ss_pred             CEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH--HHHH
Confidence            589999999988754433333344567889999999988889999999999999999999 9999976433221  1111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                      .......                  .+..++..+.+++.+||+.||.+|||+.+++.+|..+.....
T Consensus       233 ~~~~~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~~  281 (327)
T 3poz_A          233 EKGERLP------------------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ  281 (327)
T ss_dssp             HTTCCCC------------------CCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSHH
T ss_pred             HcCCCCC------------------CCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhhh
Confidence            1110000                  011223458899999999999999999999999999886543

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.87  E-value=8.9e-23  Score=140.90  Aligned_cols=134  Identities=34%  Similarity=0.493  Sum_probs=93.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccc---cccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFN---EEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~---~~~~~~~   78 (161)
                      .+||+|||+++....... .......||+.|+|||++.+..++.++||||+|++++++++|..||.....   .......
T Consensus       172 ~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~  250 (326)
T 3uim_A          172 EAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD  250 (326)
T ss_dssp             CEEECCCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHH
T ss_pred             CEEeccCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHH
Confidence            589999999987643222 223345699999999999888899999999999999999999999964321   1222333


Q ss_pred             HhhhhcCC-CCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           79 WVNDWLPI-STMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        79 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      +....... ......+...      ........+..+.+++.+||+.||.+|||+.+++++|+..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          251 WVKGLLKEKKLEALVDVDL------QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             HHTTTTSSCCSTTSSCTTC------TTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHhhchhhhhhcChhh------ccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence            32222211 1111111111      1112355677899999999999999999999999999853

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.87  E-value=7.2e-24  Score=148.72  Aligned_cols=126  Identities=24%  Similarity=0.366  Sum_probs=90.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.............||+.|+|||++.+..++.++||||+|++++++++ |..||.......  +....
T Consensus       222 ~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~--~~~~i  299 (367)
T 3l9p_A          222 VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFV  299 (367)
T ss_dssp             CEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHH
T ss_pred             eEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence            489999999986533222223344668899999999988889999999999999999998 999986643321  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                      .......                  ....++..+.+|+.+||+.||.+|||+.+++++|+.+.+...
T Consensus       300 ~~~~~~~------------------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~  348 (367)
T 3l9p_A          300 TSGGRMD------------------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD  348 (367)
T ss_dssp             HTTCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred             HcCCCCC------------------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence            1110000                  011233458899999999999999999999999999987543

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.87  E-value=6.9e-23  Score=140.72  Aligned_cols=127  Identities=20%  Similarity=0.263  Sum_probs=80.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....  ........||+.|+|||++.+..++.++||||+|++++++++|..||........... ...
T Consensus       177 ~~kL~Dfg~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~-~~~  253 (309)
T 3p86_A          177 TVKVCDFGLSRLKAST--FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAA-VGF  253 (309)
T ss_dssp             CEEECCCC-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHH-HHH
T ss_pred             cEEECCCCCCcccccc--ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHh
Confidence            5899999999864321  1123446799999999999988899999999999999999999999976433221110 000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhh
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRN  149 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~  149 (161)
                      .....                  ..+...+..+.+|+.+||+.||.+|||+.++++.|+.+.+.....
T Consensus       254 ~~~~~------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~  303 (309)
T 3p86_A          254 KCKRL------------------EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPP  303 (309)
T ss_dssp             SCCCC------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-----
T ss_pred             cCCCC------------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCC
Confidence            00000                  001223345889999999999999999999999999998765443

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.87  E-value=4e-23  Score=140.56  Aligned_cols=128  Identities=24%  Similarity=0.336  Sum_probs=79.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC---CCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~---~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||+++...............||+.|++||++.   +..++.++||||+|++++++++|+.||............
T Consensus       158 ~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~  237 (289)
T 3og7_A          158 TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM  237 (289)
T ss_dssp             EEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHH
T ss_pred             CEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHH
Confidence            47999999998754322222334467899999999886   456788999999999999999999999765443222111


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                      ............               ....++..+.+|+.+||+.||.+|||+.++++.|+++.+
T Consensus       238 ~~~~~~~~~~~~---------------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          238 VGRGSLSPDLSK---------------VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             HHHTSCCCCTTS---------------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             hcccccCcchhh---------------ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            111111100000               012234558899999999999999999999999998754

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.87  E-value=2.8e-23  Score=146.40  Aligned_cols=129  Identities=26%  Similarity=0.359  Sum_probs=92.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............+|..|+|||++.+..++.++||||+|++++++++ |..||.......  +....
T Consensus       229 ~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~--~~~~~  306 (382)
T 3tt0_A          229 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--LFKLL  306 (382)
T ss_dssp             CEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHH
T ss_pred             cEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence            589999999987644333233344567889999999988889999999999999999999 999986543221  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhhc
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRNV  150 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~~  150 (161)
                      .......                  .+..++..+.+|+.+||+.||++|||+++++++|+++........
T Consensus       307 ~~~~~~~------------------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~  358 (382)
T 3tt0_A          307 KEGHRMD------------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE  358 (382)
T ss_dssp             HTTCCCC------------------CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC
T ss_pred             HcCCCCC------------------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCC
Confidence            1110000                  011223458899999999999999999999999999987554433

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.87  E-value=2.1e-23  Score=144.57  Aligned_cols=151  Identities=18%  Similarity=0.153  Sum_probs=90.5

Q ss_pred             ceeeecccccccccCCCC------ccccccccccccccCCCCCCC-------CCCCCCccchhhhHHHHHHHhcCCCCcc
Q 043981            2 VAHLSDFSIAKLLTGEDQ------SMTQTQTLATIGYMAPEYGRE-------GRVSANGDVYSFGIMLMETFTGKKPTDE   68 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~------~~~~~~~~g~~~~~~Pe~~~~-------~~~~~~~dv~s~g~il~e~~~g~~p~~~   68 (161)
                      .+||+|||+++.+.....      ........||+.|+|||++.+       ..++.++||||+|++++++++|..|+..
T Consensus       158 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~  237 (336)
T 3g2f_A          158 TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFP  237 (336)
T ss_dssp             CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGST
T ss_pred             cEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCC
Confidence            589999999987643211      112234579999999999876       3456789999999999999999777644


Q ss_pred             ccccccchhHHhhhhcCCCCcccc----c-cccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           69 IFNEEMTLKHWVNDWLPISTMEVV----D-VNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                      ........................    . .................+..+.+|+.+||+.||.+|||++++++.|+++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll  317 (336)
T 3g2f_A          238 GESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM  317 (336)
T ss_dssp             TSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence            322111100000000000000000    0 00000000000112345667999999999999999999999999999999


Q ss_pred             HHhhhhccC
Q 043981          144 DSLLRNVGG  152 (161)
Q Consensus       144 ~~~~~~~~~  152 (161)
                      ....++...
T Consensus       318 ~~~~~~~~~  326 (336)
T 3g2f_A          318 MIWERNKSV  326 (336)
T ss_dssp             HCCCC----
T ss_pred             HHHHhcccC
Confidence            877666543

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.87  E-value=9.3e-23  Score=139.06  Aligned_cols=133  Identities=11%  Similarity=0.032  Sum_probs=93.9

Q ss_pred             ceeeecccccccccCCCCc-----cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccccc-c
Q 043981            2 VAHLSDFSIAKLLTGEDQS-----MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM-T   75 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-----~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~-~   75 (161)
                      .+||+|||+++........     .......||+.|+|||++.+..++.++||||+|++++++++|+.||........ .
T Consensus       149 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  228 (298)
T 1csn_A          149 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ  228 (298)
T ss_dssp             CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH
T ss_pred             eEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHH
Confidence            3899999999876533221     122446799999999999888899999999999999999999999976433211 1


Q ss_pred             hhHHh-hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhh
Q 043981           76 LKHWV-NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRN  149 (161)
Q Consensus        76 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~  149 (161)
                      ..... ......               .........+..+.+++.+||+.||.+|||++++++.|+++.++....
T Consensus       229 ~~~~~~~~~~~~---------------~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~  288 (298)
T 1csn_A          229 KYERIGEKKQST---------------PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTT  288 (298)
T ss_dssp             HHHHHHHHHHHS---------------CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHhhccCc---------------cHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCC
Confidence            11000 000000               000001233456899999999999999999999999999998865543

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.87  E-value=3e-23  Score=143.54  Aligned_cols=127  Identities=24%  Similarity=0.349  Sum_probs=84.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............+|..|++||++.+..++.++||||+|++++++++ |..||........  ....
T Consensus       155 ~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--~~~~  232 (327)
T 3lzb_A          155 HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI--SSIL  232 (327)
T ss_dssp             EEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHHH
T ss_pred             CEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH--HHHH
Confidence            479999999987643333323334557788999999988889999999999999999999 9999976433221  1111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR  148 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~  148 (161)
                      ......                  ..+...+..+.+|+.+||..||.+|||+.++++.|.++.....+
T Consensus       233 ~~~~~~------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~  282 (327)
T 3lzb_A          233 EKGERL------------------PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQR  282 (327)
T ss_dssp             HTTCCC------------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSHHH
T ss_pred             HcCCCC------------------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCcCc
Confidence            111000                  00112234588999999999999999999999999999865443

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=4.8e-23  Score=143.21  Aligned_cols=130  Identities=18%  Similarity=0.284  Sum_probs=89.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............||+.|+|||++.+..++.++||||+|++++++++ |..||........ +....
T Consensus       210 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-~~~~~  288 (344)
T 1rjb_A          210 VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN-FYKLI  288 (344)
T ss_dssp             EEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-HHHHH
T ss_pred             cEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHH-HHHHH
Confidence            589999999987654333333344567889999999888889999999999999999998 9999976433221 11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhhc
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRNV  150 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~~  150 (161)
                      .......                  .+...+..+.+|+.+||..||.+|||+.+++++|+.+........
T Consensus       289 ~~~~~~~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~  340 (344)
T 1rjb_A          289 QNGFKMD------------------QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEAM  340 (344)
T ss_dssp             HTTCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-------
T ss_pred             hcCCCCC------------------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHHHH
Confidence            1110000                  011223458899999999999999999999999999988765544

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.87  E-value=3.3e-22  Score=136.97  Aligned_cols=134  Identities=25%  Similarity=0.408  Sum_probs=91.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++...............|++.|+|||++.+ .++.++||||+|++++++++|..||........ +.....
T Consensus       171 ~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~  248 (307)
T 2nru_A          171 TAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-LLDIKE  248 (307)
T ss_dssp             CEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB-TTHHHH
T ss_pred             cEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH-HHHHHH
Confidence            589999999987643333223344678999999998764 578899999999999999999999976443221 111111


Q ss_pred             hhc--CCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           82 DWL--PISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        82 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                      ...  ........+....       ......+..+.+++.+||+.||.+|||+.+++++|+++..
T Consensus       249 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          249 EIEDEEKTIEDYIDKKMN-------DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             HHHTTSCCHHHHSCSSCS-------CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred             Hhhhhhhhhhhhcccccc-------ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence            111  1111111111110       1134556778999999999999999999999999998864

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.87  E-value=1.8e-22  Score=137.50  Aligned_cols=133  Identities=13%  Similarity=0.025  Sum_probs=93.8

Q ss_pred             ceeeecccccccccCCCCc-----cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccccc-c
Q 043981            2 VAHLSDFSIAKLLTGEDQS-----MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM-T   75 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-----~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~-~   75 (161)
                      .+||+|||+++........     .......||+.|+|||++.+..++.++||||+|++++++++|+.||........ .
T Consensus       146 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  225 (296)
T 4hgt_A          146 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ  225 (296)
T ss_dssp             CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS
T ss_pred             eEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhh
Confidence            4899999999876533221     122346789999999999988899999999999999999999999976433211 1


Q ss_pred             h-hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhh
Q 043981           76 L-KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRN  149 (161)
Q Consensus        76 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~  149 (161)
                      . ..........            .   ........+..+.+|+.+||+.||++|||+.++++.|+++..+....
T Consensus       226 ~~~~~~~~~~~~------------~---~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~  285 (296)
T 4hgt_A          226 KYERISEKKMST------------P---IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS  285 (296)
T ss_dssp             HHHHHHHHHHHS------------C---HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCC
T ss_pred             hhhhhhcccccc------------h---hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence            1 1000000000            0   00001223456899999999999999999999999999998876543

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.87  E-value=1.1e-22  Score=139.77  Aligned_cols=126  Identities=21%  Similarity=0.353  Sum_probs=91.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............||+.|+|||++.+..++.++||||+|++++++++ |..||............ .
T Consensus       186 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~-~  264 (316)
T 2xir_A          186 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-L  264 (316)
T ss_dssp             CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHH-H
T ss_pred             CEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHH-h
Confidence            479999999987654333333445668889999999988889999999999999999998 99998764432211111 1


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      .......                  .+...+..+.+++.+||+.||.+|||+.+++++|+.+.+..
T Consensus       265 ~~~~~~~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  312 (316)
T 2xir_A          265 KEGTRMR------------------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  312 (316)
T ss_dssp             HHTCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             ccCccCC------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence            1110000                  01112345889999999999999999999999999998754

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.87  E-value=2.3e-23  Score=143.92  Aligned_cols=127  Identities=21%  Similarity=0.365  Sum_probs=89.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.............|+..|+|||++.+..++.++||||+|++++++++ |..||.......  .....
T Consensus       153 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~~  230 (325)
T 3kex_A          153 QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE--VPDLL  230 (325)
T ss_dssp             CEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH--HHHHH
T ss_pred             eEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH--HHHHH
Confidence            589999999998754433333445668889999999988889999999999999999999 999997643321  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR  148 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~  148 (161)
                      ........                  +..++..+.+++.+||..||.+|||+.+++++|..+......
T Consensus       231 ~~~~~~~~------------------~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~~~  280 (325)
T 3kex_A          231 EKGERLAQ------------------PQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPR  280 (325)
T ss_dssp             HTTCBCCC------------------CTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSHHH
T ss_pred             HcCCCCCC------------------CCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence            11100000                  011122367899999999999999999999999999865543

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.86  E-value=3.1e-22  Score=144.29  Aligned_cols=134  Identities=17%  Similarity=0.107  Sum_probs=82.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....   ......+||+.|+|||++.+..|+.++||||+|++++++++|+.||.+........ ....
T Consensus       202 ~~kl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~-~i~~  277 (464)
T 3ttj_A          202 TLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN-KVIE  277 (464)
T ss_dssp             CEEECCCCCC-----C---CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HHHH
T ss_pred             CEEEEEEEeeeecCCC---cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHH
Confidence            5899999999876432   12344689999999999998899999999999999999999999997754322111 0000


Q ss_pred             hh-cCC-----CC--------------ccccccccccch--hhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DW-LPI-----ST--------------MEVVDVNLLSQE--DIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~-~~~-----~~--------------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      .. .+.     ..              ............  ..........+..+.+|+.+||++||++|||++|+++|-
T Consensus       278 ~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp  357 (464)
T 3ttj_A          278 QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP  357 (464)
T ss_dssp             HHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred             hcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcCh
Confidence            00 000     00              000000000000  000011233466789999999999999999999999984

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.86  E-value=2.8e-23  Score=146.81  Aligned_cols=122  Identities=24%  Similarity=0.392  Sum_probs=80.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-----------CCCCCCccchhhhHHHHHHHhcCCCCcccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-----------GRVSANGDVYSFGIMLMETFTGKKPTDEIF   70 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-----------~~~~~~~dv~s~g~il~e~~~g~~p~~~~~   70 (161)
                      .+||+|||+++.+............+||+.|+|||++.+           ..++.++||||+|++++++++|..||....
T Consensus       192 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~  271 (390)
T 2zmd_A          192 MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  271 (390)
T ss_dssp             CEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             eEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh
Confidence            489999999987643322223345679999999998764           358889999999999999999999997543


Q ss_pred             ccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           71 NEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      .....+............                  +...+..+.+|+.+||+.||.+|||+.++++|-.-
T Consensus       272 ~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  324 (390)
T 2zmd_A          272 NQISKLHAIIDPNHEIEF------------------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV  324 (390)
T ss_dssp             CHHHHHHHHHCTTSCCCC------------------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred             HHHHHHHHHhCccccCCC------------------CccchHHHHHHHHHHcccChhhCCCHHHHhhCcCc
Confidence            322222111111000000                  00112347899999999999999999999988643

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.86  E-value=5.7e-23  Score=140.37  Aligned_cols=119  Identities=22%  Similarity=0.279  Sum_probs=85.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.......  ......||+.|+|||++.+..++.++||||+|++++++++|..||............ ..
T Consensus       154 ~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~-~~  230 (297)
T 3fxz_A          154 SVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI-AT  230 (297)
T ss_dssp             CEEECCCTTCEECCSTTC--CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH-HH
T ss_pred             CEEEeeCCCceecCCccc--ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-Hh
Confidence            579999999987643222  234467999999999998888999999999999999999999999664332211110 00


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ...+ ..                ..+...+..+.+|+.+||+.||++|||+.++++|-.
T Consensus       231 ~~~~-~~----------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~  272 (297)
T 3fxz_A          231 NGTP-EL----------------QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQF  272 (297)
T ss_dssp             HCSC-CC----------------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGG
T ss_pred             CCCC-CC----------------CCccccCHHHHHHHHHHccCChhHCcCHHHHhhChh
Confidence            0000 00                001223445889999999999999999999998743

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.86  E-value=2.2e-23  Score=144.99  Aligned_cols=122  Identities=25%  Similarity=0.397  Sum_probs=79.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-----------CCCCCCccchhhhHHHHHHHhcCCCCcccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-----------GRVSANGDVYSFGIMLMETFTGKKPTDEIF   70 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-----------~~~~~~~dv~s~g~il~e~~~g~~p~~~~~   70 (161)
                      .+||+|||+++.+.............||+.|+|||++.+           ..++.++||||+|++++++++|..||....
T Consensus       145 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  224 (343)
T 3dbq_A          145 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  224 (343)
T ss_dssp             EEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             cEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh
Confidence            479999999987644333223345679999999998754           558889999999999999999999996543


Q ss_pred             ccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           71 NEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      .....+............                  +...+..+.+|+.+||+.||.+|||+.++++|.+-
T Consensus       225 ~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~  277 (343)
T 3dbq_A          225 NQISKLHAIIDPNHEIEF------------------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV  277 (343)
T ss_dssp             SHHHHHHHHHCTTSCCCC------------------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred             hHHHHHHHHhcCCcccCC------------------cccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccc
Confidence            322222111111000000                  01112347899999999999999999999998654

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.86  E-value=3.3e-23  Score=146.32  Aligned_cols=136  Identities=18%  Similarity=0.198  Sum_probs=82.9

Q ss_pred             ceeeecccccccccCCCC-------------------ccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQ-------------------SMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFT   61 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~-------------------~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~   61 (161)
                      .+||+|||+++.+.....                   .......+||++|+|||++.+ ..++.++||||+||+++++++
T Consensus       147 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~  226 (388)
T 3oz6_A          147 HVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILC  226 (388)
T ss_dssp             CEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH
T ss_pred             CEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHh
Confidence            589999999987532110                   111234679999999999876 568999999999999999999


Q ss_pred             cCCCCccccccccchhHHhhhh-cCCC-----Ccccccc-------------ccccchhhh--------hhhhHHHHHHH
Q 043981           62 GKKPTDEIFNEEMTLKHWVNDW-LPIS-----TMEVVDV-------------NLLSQEDIH--------FVAKEQCVSFV  114 (161)
Q Consensus        62 g~~p~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~-------------~~~~~~~~~--------~~~~~~~~~~~  114 (161)
                      |+.||.+....... ....... .+..     .......             .........        .......+..+
T Consensus       227 g~~pf~~~~~~~~~-~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (388)
T 3oz6_A          227 GKPIFPGSSTMNQL-ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEA  305 (388)
T ss_dssp             SSCSCCCSSHHHHH-HHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHH
T ss_pred             CCCCCCCCCHHHHH-HHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHH
Confidence            99999775432221 1111100 0000     0000000             000000000        00001234578


Q ss_pred             HHHHHHhcccCcccCCCHHHHHHH
Q 043981          115 FNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus       115 ~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .+|+.+||++||.+|||++++++|
T Consensus       306 ~dll~~~L~~dP~~R~t~~e~l~H  329 (388)
T 3oz6_A          306 LDLLDKLLQFNPNKRISANDALKH  329 (388)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             HHHHHHhhccCcccCCCHHHHhCC
Confidence            999999999999999999999998

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.86  E-value=1.4e-22  Score=139.11  Aligned_cols=127  Identities=20%  Similarity=0.337  Sum_probs=91.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|+|||++.+..++.++||||+|++++++++ |..||........... ..
T Consensus       183 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~-~~  261 (313)
T 1t46_A          183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK-MI  261 (313)
T ss_dssp             EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHH-HH
T ss_pred             CEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHH-Hh
Confidence            579999999987654333223334567889999999888889999999999999999998 9999876433221111 11


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                      .......                  .....+..+.+++.+||+.||.+|||+.+++++|+++.++..
T Consensus       262 ~~~~~~~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  310 (313)
T 1t46_A          262 KEGFRML------------------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST  310 (313)
T ss_dssp             HHTCCCC------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred             ccCCCCC------------------CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHhh
Confidence            1110000                  011223458899999999999999999999999999887643

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.86  E-value=1.2e-22  Score=139.39  Aligned_cols=130  Identities=22%  Similarity=0.304  Sum_probs=90.4

Q ss_pred             ceeeecccccccccCCCCcc------------ccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSM------------TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEI   69 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~------------~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~   69 (161)
                      .+||+|||+++.+.......            ......||+.|+|||++.+..++.++||||+|++++++++|..|+...
T Consensus       146 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~  225 (310)
T 3s95_A          146 NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDY  225 (310)
T ss_dssp             CEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTT
T ss_pred             CEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcch
Confidence            48999999998764322110            111457999999999999888999999999999999999999987654


Q ss_pred             cccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhh
Q 043981           70 FNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRN  149 (161)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~  149 (161)
                      .............                  ......+..++..+.+++.+||+.||++|||+.++++.|+++.......
T Consensus       226 ~~~~~~~~~~~~~------------------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~~  287 (310)
T 3s95_A          226 LPRTMDFGLNVRG------------------FLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGH  287 (310)
T ss_dssp             SCBCTTSSBCHHH------------------HHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHC
T ss_pred             hhhHHHHhhhhhc------------------cccccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccCc
Confidence            3322111000000                  0000001223345889999999999999999999999999998776543

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.86  E-value=1.4e-22  Score=140.30  Aligned_cols=129  Identities=22%  Similarity=0.365  Sum_probs=92.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............+|..|+|||++.+..++.++||||+|++++++++ |..||........ +....
T Consensus       202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-~~~~~  280 (333)
T 2i1m_A          202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-FYKLV  280 (333)
T ss_dssp             EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH-HHHHH
T ss_pred             eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH-HHHHH
Confidence            479999999987644333223344567889999999888889999999999999999998 8889876433221 11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRN  149 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~  149 (161)
                      .......                  .+...+..+.+++.+||+.||.+|||+.+++++|+++..+....
T Consensus       281 ~~~~~~~------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~~  331 (333)
T 2i1m_A          281 KDGYQMA------------------QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRRE  331 (333)
T ss_dssp             HHTCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHH
T ss_pred             hcCCCCC------------------CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhhcc
Confidence            1110000                  01112345889999999999999999999999999998876544

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.86  E-value=2e-23  Score=146.98  Aligned_cols=124  Identities=30%  Similarity=0.440  Sum_probs=87.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............++..|+|||++.+..++.++||||||++++|+++ |..||.......  .....
T Consensus       251 ~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~--~~~~~  328 (377)
T 3cbl_A          251 VLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ--TREFV  328 (377)
T ss_dssp             CEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH--HHHHH
T ss_pred             cEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence            589999999987532211111122345778999999987789999999999999999998 999987643321  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      .....                  .+.+..++..+.+|+.+||+.||++|||+.++++.|+++.+.
T Consensus       329 ~~~~~------------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~  375 (377)
T 3cbl_A          329 EKGGR------------------LPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR  375 (377)
T ss_dssp             HTTCC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HcCCC------------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence            11100                  000122344588999999999999999999999999998764

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.86  E-value=1.8e-22  Score=143.06  Aligned_cols=123  Identities=20%  Similarity=0.186  Sum_probs=81.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccccc--chhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM--TLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~--~~~~~   79 (161)
                      .+||+|||+++.....   ......+||+.|+|||++.+..++.++||||+|++++++++|..||........  .....
T Consensus       202 ~~kl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~  278 (400)
T 1nxk_A          202 ILKLTDFGFAKETTSH---NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR  278 (400)
T ss_dssp             CEEECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHH
T ss_pred             cEEEEecccccccCCC---CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHH
Confidence            5899999999875321   123456789999999999888899999999999999999999999976433211  11111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      .....               ...........+..+.+|+.+||..||.+|||+.+++.|-+-.
T Consensus       279 i~~~~---------------~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~  326 (400)
T 1nxk_A          279 IRMGQ---------------YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM  326 (400)
T ss_dssp             HHHTC---------------CCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred             HHcCc---------------ccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence            11000               0000000122345688999999999999999999999987654

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.86  E-value=5.8e-22  Score=136.53  Aligned_cols=138  Identities=15%  Similarity=0.153  Sum_probs=90.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC--------CCCCCCCccchhhhHHHHHHHhcCCCCccccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR--------EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEE   73 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~--------~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~   73 (161)
                      .+||+|||+++.......   .....||..|+|||++.        +..++.++||||+|++++++++|..||.......
T Consensus       154 ~~kL~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  230 (319)
T 4euu_A          154 VYKLTDFGAARELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR  230 (319)
T ss_dssp             EEEECCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG
T ss_pred             eEEEccCCCceecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc
Confidence            479999999987643222   23457999999999875        4668999999999999999999999997543322


Q ss_pred             c--chhHHhhhhcC-CCCcccccccc-----ccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           74 M--TLKHWVNDWLP-ISTMEVVDVNL-----LSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        74 ~--~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      .  ..........+ ...........     ..............+..+.+++.+||+.||++|||++|+++|....
T Consensus       231 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          231 RNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             GCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             hhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence            1  11111111111 11111100000     0000111122356677899999999999999999999999998753

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.86  E-value=4.9e-22  Score=137.93  Aligned_cols=136  Identities=14%  Similarity=0.208  Sum_probs=90.5

Q ss_pred             ceeeecccccccccCCCCcc--ccccccccccccCCCCCCCCC------CCCCccchhhhHHHHHHHhc----------C
Q 043981            2 VAHLSDFSIAKLLTGEDQSM--TQTQTLATIGYMAPEYGREGR------VSANGDVYSFGIMLMETFTG----------K   63 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~--~~~~~~g~~~~~~Pe~~~~~~------~~~~~dv~s~g~il~e~~~g----------~   63 (161)
                      .+||+|||+++.........  ......||+.|+|||++.+..      ++.++||||+|++++++++|          .
T Consensus       185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~  264 (342)
T 1b6c_B          185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ  264 (342)
T ss_dssp             CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred             CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence            58999999998764332211  224457999999999987652      23679999999999999998          6


Q ss_pred             CCCccccccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        64 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                      .||.......................    ....     .......+...+.+|+.+||+.||.+|||+.+++++|+.+.
T Consensus       265 ~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~  335 (342)
T 1b6c_B          265 LPYYDLVPSDPSVEEMRKVVCEQKLR----PNIP-----NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS  335 (342)
T ss_dssp             CTTTTTSCSSCCHHHHHHHHTTSCCC----CCCC-----GGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCccccCcCcccHHHHHHHHHHHHhC----CCCc-----ccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence            67755433322222221111111000    0000     00012355667999999999999999999999999999998


Q ss_pred             HHh
Q 043981          144 DSL  146 (161)
Q Consensus       144 ~~~  146 (161)
                      ++.
T Consensus       336 ~~~  338 (342)
T 1b6c_B          336 QQE  338 (342)
T ss_dssp             HTT
T ss_pred             HHh
Confidence            754

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.86  E-value=1.8e-22  Score=140.80  Aligned_cols=138  Identities=9%  Similarity=0.040  Sum_probs=94.3

Q ss_pred             ceeeecccccccccCCCCc-----cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQS-----MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-----~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||+++.+......     .......||+.|+|||++.+..++.++||||+|++++++++|+.||.........+
T Consensus       199 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  278 (352)
T 2jii_A          199 QVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDI  278 (352)
T ss_dssp             EEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred             eEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHH
Confidence            5899999999876432111     11233579999999999988889999999999999999999999998754332222


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhh
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRN  149 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~  149 (161)
                      .......... .........         .....+..+.+|+.+||+.||.+|||++++++.|+++.+.....
T Consensus       279 ~~~~~~~~~~-~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~  341 (352)
T 2jii_A          279 MKQKQKFVDK-PGPFVGPCG---------HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRVS  341 (352)
T ss_dssp             HHHHHHHHHS-CCCEECTTS---------CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHhccCC-hhhhhhhcc---------ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCCC
Confidence            2211111100 000000000         00112345889999999999999999999999999998776543

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.86  E-value=6.7e-23  Score=140.72  Aligned_cols=124  Identities=24%  Similarity=0.367  Sum_probs=89.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............+++.|++||++.+..++.++||||+|++++++++ |..||.......  +....
T Consensus       188 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~~  265 (314)
T 2ivs_A          188 KMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER--LFNLL  265 (314)
T ss_dssp             EEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHH
T ss_pred             CEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHh
Confidence            589999999987644333223334567888999999988889999999999999999999 999987644322  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      .......                  .....+..+.+++.+||+.||.+|||+.+++++|+++...
T Consensus       266 ~~~~~~~------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          266 KTGHRME------------------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             HTTCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             hcCCcCC------------------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence            1110000                  0112344588999999999999999999999999998764

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.86  E-value=2.6e-22  Score=136.74  Aligned_cols=133  Identities=13%  Similarity=0.031  Sum_probs=93.6

Q ss_pred             ceeeecccccccccCCCCc-----cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccccc-c
Q 043981            2 VAHLSDFSIAKLLTGEDQS-----MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM-T   75 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-----~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~-~   75 (161)
                      .+||+|||+++........     .......||..|+|||++.+..++.++||||+|++++++++|+.||........ .
T Consensus       146 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  225 (296)
T 3uzp_A          146 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ  225 (296)
T ss_dssp             CEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSS
T ss_pred             eEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhh
Confidence            5899999999876543221     112346799999999999888899999999999999999999999976433211 1


Q ss_pred             -hhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhh
Q 043981           76 -LKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRN  149 (161)
Q Consensus        76 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~  149 (161)
                       +..........            .   ........+..+.+++.+||+.||.+|||+.++++.|+++.......
T Consensus       226 ~~~~~~~~~~~~------------~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~  285 (296)
T 3uzp_A          226 KYERISEKKMST------------P---IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFS  285 (296)
T ss_dssp             HHHHHHHHHHHS------------C---HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred             hhhhhcccccCC------------c---hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCCc
Confidence             11100000000            0   00001223456899999999999999999999999999998766543

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.86  E-value=6e-22  Score=138.78  Aligned_cols=138  Identities=12%  Similarity=0.097  Sum_probs=93.7

Q ss_pred             ceeeecccccccccCCCCc-----cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQS-----MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-----~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||+++.+......     .......||+.|+|||++.+..++.++||||||++++++++|+.||..........
T Consensus       192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~  271 (364)
T 3op5_A          192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYV  271 (364)
T ss_dssp             CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred             eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHH
Confidence            5899999999876432111     11133559999999999988889999999999999999999999997643322211


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhh
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRN  149 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~  149 (161)
                      ....... ........+...         ....++..+.+++..||..||.+||++.++++.|+.+.......
T Consensus       272 ~~~~~~~-~~~~~~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~  334 (364)
T 3op5_A          272 RDSKIRY-RENIASLMDKCF---------PAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSK  334 (364)
T ss_dssp             HHHHHHH-HHCHHHHHHHHS---------CTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred             HHHHHHh-hhhHHHHHHHhc---------ccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence            1111000 000000000000         00223556899999999999999999999999999998765443

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.86  E-value=6e-22  Score=134.49  Aligned_cols=119  Identities=24%  Similarity=0.348  Sum_probs=84.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC--CCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR--EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~--~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++....     ......||+.|+|||++.  ...++.++||||+|++++++++|..||.............
T Consensus       167 ~~kl~Dfg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~  241 (287)
T 4f0f_A          167 CAKVADFGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINM  241 (287)
T ss_dssp             CEEECCCTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHH
T ss_pred             eEEeCCCCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHH
Confidence            389999999975422     234467899999999984  4457889999999999999999999997644333222211


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      .......                 ...+..++..+.+++.+||+.||.+|||+.++++.|+++
T Consensus       242 ~~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          242 IREEGLR-----------------PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             HHHSCCC-----------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             HhccCCC-----------------CCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            1110000                 000122345588999999999999999999999999864

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.86  E-value=4e-22  Score=136.78  Aligned_cols=123  Identities=26%  Similarity=0.315  Sum_probs=83.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....     .....||..|+|||++.+..++.++||||+|++++++++|+.||...............
T Consensus       144 ~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~  218 (307)
T 2eva_A          144 VLKICDFGTACDIQTH-----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVH  218 (307)
T ss_dssp             EEEECCCCC-----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHH
T ss_pred             EEEEcccccccccccc-----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHh
Confidence            3799999999765321     22346899999999998888999999999999999999999999754332211111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhh
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                      ......                  .....+..+.+++.+||+.||.+|||+.+++++|..+.....
T Consensus       219 ~~~~~~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  266 (307)
T 2eva_A          219 NGTRPP------------------LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP  266 (307)
T ss_dssp             TTCCCC------------------CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred             cCCCCC------------------cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence            100000                  011223458899999999999999999999999999886543

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.86  E-value=1e-22  Score=145.95  Aligned_cols=120  Identities=22%  Similarity=0.238  Sum_probs=85.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.......  ......||+.|+|||++.+..++.++||||+|++++++++|..||.......  +.....
T Consensus       151 ~vkL~DFG~a~~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~--~~~~i~  226 (444)
T 3soa_A          151 AVKLADFGLAIEVEGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR--LYQQIK  226 (444)
T ss_dssp             CEEECCCSSCBCCCTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHH
T ss_pred             cEEEccCceeEEecCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH--HHHHHH
Confidence            489999999987643222  2234679999999999988889999999999999999999999996533221  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ....               ....+.....+..+.+|+.+||+.||.+|||+.++++|-+
T Consensus       227 ~~~~---------------~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~  270 (444)
T 3soa_A          227 AGAY---------------DFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPW  270 (444)
T ss_dssp             HTCC---------------CCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCT
T ss_pred             hCCC---------------CCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCcc
Confidence            1000               0000001223455889999999999999999999998743

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.86  E-value=1e-22  Score=138.05  Aligned_cols=125  Identities=21%  Similarity=0.362  Sum_probs=79.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++....... .......+++.|+|||++.+..++.++||||+|++++++++ |..||........  ....
T Consensus       154 ~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~--~~~i  230 (281)
T 1mp8_A          154 CVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV--IGRI  230 (281)
T ss_dssp             EEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHHH
T ss_pred             CEEECccccccccCcccc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH--HHHH
Confidence            479999999987643211 12233456788999999987889999999999999999996 8899876443221  1111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                      ......                  ..+..++..+.+++.+||+.||++|||+.+++++|+++.++..
T Consensus       231 ~~~~~~------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~  279 (281)
T 1mp8_A          231 ENGERL------------------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK  279 (281)
T ss_dssp             HTTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HcCCCC------------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence            110000                  0012234558899999999999999999999999999987654

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.86  E-value=1e-22  Score=142.55  Aligned_cols=119  Identities=17%  Similarity=0.198  Sum_probs=85.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.+....   .....+||+.|+|||++.+..++.++||||+|++++++++|..||.+...... +.. ..
T Consensus       157 ~vkl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~-~~~-i~  231 (361)
T 2yab_A          157 HIKLIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LAN-IT  231 (361)
T ss_dssp             CEEECCCSSCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHH-HH
T ss_pred             CEEEEecCCceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH-HHH-HH
Confidence            58999999998764322   23446799999999999888899999999999999999999999976432211 110 00


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ...               ...........+..+.+|+.+||..||.+|||+.++++|-+
T Consensus       232 ~~~---------------~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~  275 (361)
T 2yab_A          232 AVS---------------YDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW  275 (361)
T ss_dssp             TTC---------------CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred             hcC---------------CCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcC
Confidence            000               00000111233456889999999999999999999998743

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.85  E-value=1e-22  Score=137.20  Aligned_cols=118  Identities=25%  Similarity=0.393  Sum_probs=78.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....    ......|++.|+|||++.+..++.++||||+|++++++++|+.||...............
T Consensus       154 ~~kl~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  229 (271)
T 3dtc_A          154 ILKITDFGLAREWHRT----TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN  229 (271)
T ss_dssp             CEEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTS
T ss_pred             ceEEccCCcccccccc----cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcC
Confidence            4899999999875322    122357899999999998888999999999999999999999999764332211110000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      . ...                  ..+..++..+.+++.+||+.||.+|||+.+++++|+++
T Consensus       230 ~-~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          230 K-LAL------------------PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             C-CCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             C-CCC------------------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            0 000                  00122234588999999999999999999999999864

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.85  E-value=1.4e-22  Score=139.14  Aligned_cols=125  Identities=21%  Similarity=0.335  Sum_probs=83.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............+++.|++||++.+..++.++||||+|++++++++ |..||........  ....
T Consensus       185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~~~  262 (313)
T 3brb_A          185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM--YDYL  262 (313)
T ss_dssp             CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH--HHHH
T ss_pred             cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH--HHHH
Confidence            589999999987643322222233557889999999988889999999999999999999 8888865433211  1111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      .......                  .....+..+.+++.+||..||.+|||+.+++.+|+++.+..
T Consensus       263 ~~~~~~~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l  310 (313)
T 3brb_A          263 LHGHRLK------------------QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL  310 (313)
T ss_dssp             HTTCCCC------------------CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HcCCCCC------------------CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence            1100000                  01123345889999999999999999999999999998764

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.85  E-value=1.8e-22  Score=139.27  Aligned_cols=125  Identities=21%  Similarity=0.351  Sum_probs=81.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............+++.|++||++.+..++.++||||+|++++++++ |..||........  ....
T Consensus       175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--~~~~  252 (323)
T 3qup_A          175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI--YNYL  252 (323)
T ss_dssp             CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHHH
T ss_pred             CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH--HHHH
Confidence            589999999987643322222233456788999999988889999999999999999999 8999876433221  1111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      .......                  .....+..+.+|+.+||+.||.+|||+.++++.|+++.+..
T Consensus       253 ~~~~~~~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~  300 (323)
T 3qup_A          253 IGGNRLK------------------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL  300 (323)
T ss_dssp             HTTCCCC------------------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             hcCCCCC------------------CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence            1000000                  01122345889999999999999999999999999998643

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.85  E-value=8.9e-23  Score=142.06  Aligned_cols=133  Identities=11%  Similarity=0.144  Sum_probs=89.6

Q ss_pred             ceeeecccccccccCCCC-----ccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQ-----SMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~-----~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||+++.+.....     ........||..|+|||++.+..++.++||||+|++++++++|..||..........
T Consensus       191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~  270 (345)
T 2v62_A          191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV  270 (345)
T ss_dssp             SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred             cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence            589999999987642211     111234579999999999988889999999999999999999999996533322222


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                      ............ ...         .........+..+.+++.+||..||.+|||++++++.|+.+.-
T Consensus       271 ~~~~~~~~~~~~-~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~  328 (345)
T 2v62_A          271 QTAKTNLLDELP-QSV---------LKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI  328 (345)
T ss_dssp             HHHHHHHHHTTT-HHH---------HHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred             HHHHHhhccccc-HHH---------HhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence            111111100000 000         0000001334568999999999999999999999999987654

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.85  E-value=2.1e-22  Score=138.13  Aligned_cols=135  Identities=17%  Similarity=0.128  Sum_probs=87.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....   .......||+.|+|||++.+..++.++||||+|++++++++|..||.......... ....
T Consensus       158 ~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~-~i~~  233 (308)
T 3g33_A          158 TVKLADFGLARIYSYQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLG-KIFD  233 (308)
T ss_dssp             CEEECSCSCTTTSTTC---CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHH-HHHH
T ss_pred             CEEEeeCccccccCCC---cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHH
Confidence            5899999999876422   12344678999999999988889999999999999999999999997654332211 1111


Q ss_pred             hh---cCCCCcccccc--cccc-chh-hhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DW---LPISTMEVVDV--NLLS-QED-IHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~---~~~~~~~~~~~--~~~~-~~~-~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ..   ...........  .... ... .........+..+.+|+.+||++||++|||+.++++|-.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~  299 (308)
T 3g33_A          234 LIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY  299 (308)
T ss_dssp             HHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTT
T ss_pred             HhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCcc
Confidence            11   00111000000  0000 000 000011234456889999999999999999999998743

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.85  E-value=1.5e-22  Score=141.87  Aligned_cols=119  Identities=18%  Similarity=0.180  Sum_probs=85.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......   ......||+.|+|||++.+..++.++||||+|++++++++|..||.......  +.....
T Consensus       169 ~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~--~~~~i~  243 (362)
T 2bdw_A          169 AVKLADFGLAIEVNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--LYAQIK  243 (362)
T ss_dssp             CEEECCCTTCBCCTTCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH
T ss_pred             CEEEeecCcceEecCCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHH
Confidence            48999999998764321   2334679999999999988889999999999999999999999996543211  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      .....               .+.......+..+.+|+.+||+.||.+|||+.++++|-+
T Consensus       244 ~~~~~---------------~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  287 (362)
T 2bdw_A          244 AGAYD---------------YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW  287 (362)
T ss_dssp             HTCCC---------------CCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHH
T ss_pred             hCCCC---------------CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence            10000               000001233455889999999999999999999998844

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.85  E-value=6.3e-23  Score=138.07  Aligned_cols=125  Identities=24%  Similarity=0.412  Sum_probs=87.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++....... .......++..|+|||++.+..++.++||||+|++++++++ |..||...........  .
T Consensus       142 ~~~l~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~--~  218 (268)
T 3sxs_A          142 CVKVSDFGMTRYVLDDQY-VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLK--V  218 (268)
T ss_dssp             CEEECCTTCEEECCTTCE-EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH--H
T ss_pred             CEEEccCccceecchhhh-hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHH--H
Confidence            589999999987643222 12233456778999999988789999999999999999998 9999865433221111  0


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                      .......     .             +...+..+.+++.+||+.||.+|||+.+++++|+.+.+..+
T Consensus       219 ~~~~~~~-----~-------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~k  267 (268)
T 3sxs_A          219 SQGHRLY-----R-------------PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKDK  267 (268)
T ss_dssp             HTTCCCC-----C-------------CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC---
T ss_pred             HcCCCCC-----C-------------CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhccC
Confidence            0000000     0             11123458899999999999999999999999999876543

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.85  E-value=5.5e-23  Score=142.76  Aligned_cols=127  Identities=24%  Similarity=0.372  Sum_probs=87.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............+|..|+|||++.+..++.++||||+|++++++++ |..||........  ....
T Consensus       212 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~--~~~~  289 (343)
T 1luf_A          212 VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV--IYYV  289 (343)
T ss_dssp             CEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH--HHHH
T ss_pred             eEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHH--HHHH
Confidence            589999999987643222222334567889999999888889999999999999999998 9999876433211  1111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR  148 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~  148 (161)
                      .......                  .+..++..+.+|+.+||+.||.+|||+.+++++|+++.+....
T Consensus       290 ~~~~~~~------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~~  339 (343)
T 1luf_A          290 RDGNILA------------------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEG  339 (343)
T ss_dssp             HTTCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC----
T ss_pred             hCCCcCC------------------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhhh
Confidence            1100000                  0112334588999999999999999999999999998875543

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.85  E-value=2.2e-22  Score=139.10  Aligned_cols=118  Identities=15%  Similarity=0.206  Sum_probs=84.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......   ......||+.|+|||++.+..++.++||||+|++++++++|..||........ +.. ..
T Consensus       156 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~-~~  230 (326)
T 2y0a_A          156 RIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LAN-VS  230 (326)
T ss_dssp             CEEECCCTTCEECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHH-HH
T ss_pred             CEEEEECCCCeECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHH-HH
Confidence            58999999998764322   22346799999999999888899999999999999999999999965432211 110 00


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ....               ..........+..+.+|+.+||+.||.+|||+.++++|-
T Consensus       231 ~~~~---------------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp  273 (326)
T 2y0a_A          231 AVNY---------------EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP  273 (326)
T ss_dssp             HTCC---------------CCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHST
T ss_pred             hcCC---------------CcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCC
Confidence            0000               000001122345688999999999999999999999874

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.85  E-value=1.2e-22  Score=140.34  Aligned_cols=122  Identities=22%  Similarity=0.294  Sum_probs=86.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCC-CCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~-~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.............||+.|+|||++.+..+ +.++||||+|++++++++|..||............+.
T Consensus       143 ~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~  222 (323)
T 3tki_A          143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK  222 (323)
T ss_dssp             CEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHH
T ss_pred             CEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh
Confidence            479999999987643322223345679999999999877665 6789999999999999999999976544333222221


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ......                  ......+..+.+|+.+||+.||.+|||+.|+++|-+-
T Consensus       223 ~~~~~~------------------~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~  265 (323)
T 3tki_A          223 EKKTYL------------------NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWY  265 (323)
T ss_dssp             TTCTTS------------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTT
T ss_pred             cccccC------------------CccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhh
Confidence            110000                  0012233457899999999999999999999988543

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.85  E-value=2.7e-22  Score=135.89  Aligned_cols=125  Identities=22%  Similarity=0.341  Sum_probs=86.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++....... .......++..|+|||++.+..++.++||||+|++++++++ |+.||........  ....
T Consensus       151 ~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~--~~~~  227 (281)
T 3cc6_A          151 CVKLGDFGLSRYIEDEDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV--IGVL  227 (281)
T ss_dssp             EEEECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH--HHHH
T ss_pred             cEEeCccCCCcccccccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH--HHHH
Confidence            479999999987643211 12233457788999999987889999999999999999998 9999865433221  1111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                      .......                  .+...+..+.+++.+||..||.+|||+.+++++|+.+.+...
T Consensus       228 ~~~~~~~------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~  276 (281)
T 3cc6_A          228 EKGDRLP------------------KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEK  276 (281)
T ss_dssp             HHTCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             hcCCCCC------------------CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhh
Confidence            1110000                  011223458899999999999999999999999999987543

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.85  E-value=5.4e-22  Score=141.45  Aligned_cols=134  Identities=19%  Similarity=0.152  Sum_probs=86.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.....   ....+||+.|+|||++.+. .++.++||||+||+++||++|+.||.+...... +....
T Consensus       195 ~~kl~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~-l~~i~  270 (420)
T 1j1b_A          195 VLKLCDFGSAKQLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ-LVEII  270 (420)
T ss_dssp             EEEECCCTTCEECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHH
T ss_pred             eEEeccchhhhhcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH
Confidence            479999999987643222   2346789999999998765 689999999999999999999999976543221 11111


Q ss_pred             hhhc-C---------CCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWL-P---------ISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      .... +         ........+.. .............+..+.+|+.+||++||.+|||+.+++.|-.
T Consensus       271 ~~lg~p~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~  339 (420)
T 1j1b_A          271 KVLGTPTREQIREMNPNYTEFKFPQI-KAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF  339 (420)
T ss_dssp             HHHCSCCHHHHHHHCSCCCCCCCCCC-CCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             HHhCCCCHHHHHhhChhhhhhccCcc-CCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHh
Confidence            1100 0         00000000000 0000111111233466899999999999999999999998754

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.85  E-value=2.7e-22  Score=144.13  Aligned_cols=120  Identities=28%  Similarity=0.406  Sum_probs=86.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.....     .....++..|+|||++.+..++.++||||||+++||+++ |..||........  ....
T Consensus       327 ~~kl~DfG~a~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~--~~~i  399 (450)
T 1k9a_A          327 VAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--VPRV  399 (450)
T ss_dssp             CEEECCCTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH--HHHH
T ss_pred             CEEEeeCCCccccccc-----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--HHHH
Confidence            5899999999864221     122357889999999988889999999999999999998 9999976433221  1111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      ....                  ....+..++..+.+||.+||..||.+|||+.+++..|+.+....
T Consensus       400 ~~~~------------------~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~  447 (450)
T 1k9a_A          400 EKGY------------------KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE  447 (450)
T ss_dssp             HTTC------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred             HcCC------------------CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence            1100                  00012234456889999999999999999999999999988653

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.85  E-value=1e-22  Score=140.79  Aligned_cols=127  Identities=25%  Similarity=0.359  Sum_probs=87.5

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++........ .......+|..|+|||++.+..++.++||||+|++++++++ |..||........  ...
T Consensus       189 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--~~~  266 (325)
T 3kul_A          189 VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV--ISS  266 (325)
T ss_dssp             CEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH--HHH
T ss_pred             CEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHH--HHH
Confidence            5899999999876433221 12223456778999999988889999999999999999998 9999865433211  111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhh
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR  148 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~  148 (161)
                      .......                  +.+..++..+.+|+.+||..||.+|||+.++++.|+.+.+....
T Consensus       267 ~~~~~~~------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~  317 (325)
T 3kul_A          267 VEEGYRL------------------PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES  317 (325)
T ss_dssp             HHTTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred             HHcCCCC------------------CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence            1110000                  00122345588999999999999999999999999999875443

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.85  E-value=5.2e-22  Score=137.75  Aligned_cols=116  Identities=22%  Similarity=0.249  Sum_probs=83.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCC-CCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~-~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.....   ......+||+.|+|||++.+..+ +.++||||+|++++++++|..||.........     
T Consensus       146 ~~kl~DFG~s~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~-----  217 (336)
T 3h4j_B          146 NVKIADFGLSNIMTDG---NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF-----  217 (336)
T ss_dssp             CEEECCSSCTBTTTTS---BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB-----
T ss_pred             CEEEEEeccceeccCC---cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH-----
Confidence            5899999999876432   12344679999999999987775 67899999999999999999999653221100     


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                              .....    ....    .+...+..+.+|+.+||..||.+|||++++++|-+-
T Consensus       218 --------~~i~~----~~~~----~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~  262 (336)
T 3h4j_B          218 --------KKVNS----CVYV----MPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWF  262 (336)
T ss_dssp             --------CCCCS----SCCC----CCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHH
T ss_pred             --------HHHHc----CCCC----CcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhh
Confidence                    00000    0000    011233458899999999999999999999998664

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.85  E-value=1.3e-22  Score=140.02  Aligned_cols=120  Identities=18%  Similarity=0.217  Sum_probs=86.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.+....   ......||+.|+|||++.+..++.++||||+|++++++++|..||........ +.. ..
T Consensus       142 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~-i~  216 (321)
T 1tki_A          142 TIKIIEFGQARQLKPGD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI-IEN-IM  216 (321)
T ss_dssp             CEEECCCTTCEECCTTC---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHH-HH
T ss_pred             CEEEEECCCCeECCCCC---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHH-HHH-HH
Confidence            58999999998764321   23446789999999999888889999999999999999999999976432211 111 11


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ....               ..........+..+.+|+.+||..||.+|||+.++++|-+-
T Consensus       217 ~~~~---------------~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~  261 (321)
T 1tki_A          217 NAEY---------------TFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWL  261 (321)
T ss_dssp             HTCC---------------CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHH
T ss_pred             cCCC---------------CCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhh
Confidence            0000               00000112334568899999999999999999999998763

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.85  E-value=9.2e-22  Score=138.93  Aligned_cols=133  Identities=17%  Similarity=0.130  Sum_probs=86.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccc-----h
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMT-----L   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~-----~   76 (161)
                      .+||+|||+++.....     .....||..|+|||++.+..++.++||||+|++++++++|..||.........     +
T Consensus       234 ~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~  308 (397)
T 1wak_A          234 KVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHI  308 (397)
T ss_dssp             CEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHH
T ss_pred             ceEecccccccccccc-----CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHH
Confidence            5899999999875321     23457899999999998888999999999999999999999999764432211     0


Q ss_pred             hHHhhhhc--CC------C-Ccccc----------ccc---cccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHH
Q 043981           77 KHWVNDWL--PI------S-TMEVV----------DVN---LLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKE  134 (161)
Q Consensus        77 ~~~~~~~~--~~------~-~~~~~----------~~~---~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~  134 (161)
                      ........  +.      . ....+          ...   ...............+..+.+|+.+||+.||++|||+++
T Consensus       309 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  388 (397)
T 1wak_A          309 ALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAE  388 (397)
T ss_dssp             HHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHH
T ss_pred             HHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHH
Confidence            00000000  00      0 00000          000   000000001113456678999999999999999999999


Q ss_pred             HHHHH
Q 043981          135 IVTKL  139 (161)
Q Consensus       135 vl~~l  139 (161)
                      +++|-
T Consensus       389 ~l~hp  393 (397)
T 1wak_A          389 CLRHP  393 (397)
T ss_dssp             HHTSG
T ss_pred             HhhCc
Confidence            99873

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.85  E-value=2e-22  Score=139.70  Aligned_cols=128  Identities=26%  Similarity=0.376  Sum_probs=90.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............+++.|+|||++.+..++.++||||+|++++++++ |..||.......  +....
T Consensus       195 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~  272 (334)
T 2pvf_A          195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--LFKLL  272 (334)
T ss_dssp             CEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHH
T ss_pred             CEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHH--HHHHH
Confidence            589999999987643322222333457788999999887789999999999999999999 999986543221  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRN  149 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~  149 (161)
                      .......                  ....++..+.+++.+||..||.+|||+.+++++|+++.+.....
T Consensus       273 ~~~~~~~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~  323 (334)
T 2pvf_A          273 KEGHRMD------------------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNE  323 (334)
T ss_dssp             HHTCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred             hcCCCCC------------------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccccC
Confidence            1110000                  01123345889999999999999999999999999998765543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.85  E-value=8.8e-22  Score=135.31  Aligned_cols=134  Identities=19%  Similarity=0.237  Sum_probs=84.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.......  ......||+.|+|||++.+ ..++.++||||+|++++++++|+.||..............
T Consensus       157 ~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~  234 (311)
T 3niz_A          157 ALKLADFGLARAFGIPVR--SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFS  234 (311)
T ss_dssp             CEEECCCTTCEETTSCCC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHH
T ss_pred             CEEEccCcCceecCCCcc--cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence            579999999987642211  2344578999999998876 4589999999999999999999999976554332111111


Q ss_pred             --hhhcCCCCcccccc--------ccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 --NDWLPISTMEVVDV--------NLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 --~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                        ....+.........        ........ .......+.++.+|+.+||++||.+|||++++++|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  301 (311)
T 3niz_A          235 ILGTPNPREWPQVQELPLWKQRTFQVFEKKPW-SSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH  301 (311)
T ss_dssp             HHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCH-HHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             HHCCCChHHhhhhhccchhhhcccccccCCcH-HHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence              11111111100000        00000000 00112234568899999999999999999999986

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.84  E-value=2.6e-22  Score=143.44  Aligned_cols=64  Identities=22%  Similarity=0.158  Sum_probs=54.1

Q ss_pred             eeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccc
Q 043981            3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFN   71 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~   71 (161)
                      +||+|||+++....     .....+||+.|+|||++.+..++.++||||+|++++++++|..||.....
T Consensus       241 vkL~DFG~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~  304 (429)
T 3kvw_A          241 IKVIDFGSSCYEHQ-----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE  304 (429)
T ss_dssp             EEECCCTTCEETTC-----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             eEEeecccceecCC-----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCH
Confidence            89999999976432     12345789999999999888899999999999999999999999976543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.84  E-value=1.5e-22  Score=136.39  Aligned_cols=123  Identities=25%  Similarity=0.427  Sum_probs=87.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...... ........++..|+|||++.+..++.++||||+|++++++++ |..||........  ....
T Consensus       144 ~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~--~~~~  220 (269)
T 4hcu_A          144 VIKVSDFGMTRFVLDDQ-YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEV--VEDI  220 (269)
T ss_dssp             CEEECCTTGGGGBCCHH-HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HHHH
T ss_pred             CEEeccccccccccccc-cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHH--HHHH
Confidence            47999999998753211 112233456778999999988889999999999999999999 8999865433211  1111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      .......                  .+...+..+.+++.+||+.||.+|||+++++++|+++.++
T Consensus       221 ~~~~~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          221 STGFRLY------------------KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             HTTCCCC------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             hcCccCC------------------CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence            1100000                  0111234588999999999999999999999999998764

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.84  E-value=3.7e-22  Score=139.21  Aligned_cols=119  Identities=18%  Similarity=0.206  Sum_probs=75.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....   .......||+.|+|||++.+..++.++||||+|++++++++|..||.........+.....
T Consensus       189 ~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~  265 (349)
T 2w4o_A          189 PLKIADFGLSKIVEHQ---VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILN  265 (349)
T ss_dssp             CEEECCCC-------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHT
T ss_pred             CEEEccCccccccCcc---cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHh
Confidence            5899999999875322   1223467899999999998888999999999999999999999999664433221111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ....  .              ..+.....+..+.+|+.+||..||++|||+.++++|-
T Consensus       266 ~~~~--~--------------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp  307 (349)
T 2w4o_A          266 CEYY--F--------------ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHP  307 (349)
T ss_dssp             TCCC--C--------------CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred             CCCc--c--------------CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence            0000  0              0000122344588999999999999999999999873

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.84  E-value=2.6e-21  Score=135.91  Aligned_cols=135  Identities=16%  Similarity=0.106  Sum_probs=78.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....   .......||+.|+|||++.+..++.++||||+|++++++++|..||.+...... +.....
T Consensus       165 ~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~  240 (371)
T 2xrw_A          165 TLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIE  240 (371)
T ss_dssp             CEEECCCCC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHC
T ss_pred             CEEEEEeecccccccc---cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH
Confidence            5899999999875322   122346789999999999888899999999999999999999999976443211 110000


Q ss_pred             hhcCC------CCc-----------ccccc---ccccch--hhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DWLPI------STM-----------EVVDV---NLLSQE--DIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~------~~~-----------~~~~~---~~~~~~--~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      .....      ...           .....   ......  ..........+..+.+|+.+||+.||.+|||++++++|-
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp  320 (371)
T 2xrw_A          241 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP  320 (371)
T ss_dssp             -CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred             HhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence            00000      000           00000   000000  000011234467799999999999999999999999986


Q ss_pred             H
Q 043981          140 L  140 (161)
Q Consensus       140 ~  140 (161)
                      .
T Consensus       321 ~  321 (371)
T 2xrw_A          321 Y  321 (371)
T ss_dssp             H
T ss_pred             c
Confidence            5

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.84  E-value=9.3e-22  Score=138.66  Aligned_cols=65  Identities=22%  Similarity=0.189  Sum_probs=55.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFN   71 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~   71 (161)
                      .+||+|||+++.....     .....||+.|+|||++.+..++.++||||+|++++++++|+.||.....
T Consensus       199 ~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~  263 (382)
T 2vx3_A          199 AIKIVDFGSSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE  263 (382)
T ss_dssp             CEEECCCTTCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             cEEEEeccCceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence            4899999999876321     2346789999999999988899999999999999999999999976443

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.84  E-value=1e-21  Score=133.77  Aligned_cols=135  Identities=16%  Similarity=0.080  Sum_probs=84.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++......  .......||+.|+|||++.+.. ++.++||||+|++++++++|..|+.........+....
T Consensus       139 ~~kl~Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~  216 (292)
T 3o0g_A          139 ELKLANFGLARAFGIPV--RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF  216 (292)
T ss_dssp             CEEECCCTTCEECCSCC--SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHH
T ss_pred             CEEEeecccceecCCcc--ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHH
Confidence            58999999998764322  2234467899999999987766 89999999999999999998888644333222222221


Q ss_pred             hhhcC---CCCccccccccc------cchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLP---ISTMEVVDVNLL------SQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~---~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .....   ............      .............+..+.+|+.+||+.||++|||++|+++|
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  283 (292)
T 3o0g_A          217 RLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             HHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence            11111   000000000000      00000000112344568899999999999999999999986

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.84  E-value=7.5e-22  Score=139.68  Aligned_cols=133  Identities=18%  Similarity=0.202  Sum_probs=85.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.....   .....||+.|+|||++.+. .++.++||||+|++++++++|+.||.+........ ...
T Consensus       180 ~~kL~DFG~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~-~i~  255 (394)
T 4e7w_A          180 VLKLIDFGSAKILIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLV-EII  255 (394)
T ss_dssp             EEEECCCTTCEECCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HHH
T ss_pred             cEEEeeCCCcccccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHH
Confidence            589999999987643222   2346789999999988765 48999999999999999999999997754322211 111


Q ss_pred             hhh-cCCC------Cccccccc--cccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDW-LPIS------TMEVVDVN--LLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~-~~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ... .+..      ........  ...............+..+.+|+.+||++||.+|||+.+++.|
T Consensus       256 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (394)
T 4e7w_A          256 KVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH  322 (394)
T ss_dssp             HHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence            100 0000      00000000  0000011111122345678999999999999999999999987

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.84  E-value=1e-21  Score=135.97  Aligned_cols=131  Identities=15%  Similarity=0.082  Sum_probs=91.3

Q ss_pred             ceeeecccccccccCCCCcc-----ccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccccc-c
Q 043981            2 VAHLSDFSIAKLLTGEDQSM-----TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM-T   75 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~-----~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~-~   75 (161)
                      .+||+|||+++.+.......     ......||+.|+|||++.+..++.++||||+|++++++++|..||........ .
T Consensus       148 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~  227 (330)
T 2izr_A          148 VIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKE  227 (330)
T ss_dssp             SEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHH
T ss_pred             eEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHH
Confidence            38999999998764322211     12456799999999999988899999999999999999999999976533221 1


Q ss_pred             hhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhh
Q 043981           76 LKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                      ...........           ...   .......+ .+.+++..||+.||.+||++.++++.|..+.+...
T Consensus       228 ~~~~i~~~~~~-----------~~~---~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~  284 (330)
T 2izr_A          228 RYQKIGDTKRA-----------TPI---EVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKG  284 (330)
T ss_dssp             HHHHHHHHHHH-----------SCH---HHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHhhhcc-----------CCH---HHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcC
Confidence            11000000000           000   00001122 68999999999999999999999999998887653

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.84  E-value=2.6e-22  Score=138.69  Aligned_cols=127  Identities=24%  Similarity=0.359  Sum_probs=88.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............|++.|+|||++.+..++.++||||+|++++++++ |..||.......  .....
T Consensus       181 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~~  258 (327)
T 2yfx_A          181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--VLEFV  258 (327)
T ss_dssp             CEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHH
T ss_pred             eEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH--HHHHH
Confidence            489999999986543322222334567889999999888889999999999999999998 889986543221  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR  148 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~  148 (161)
                      .......                  ....++..+.+++.+||+.||.+|||+.+++++|+.+......
T Consensus       259 ~~~~~~~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~~  308 (327)
T 2yfx_A          259 TSGGRMD------------------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV  308 (327)
T ss_dssp             HTTCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHH
T ss_pred             hcCCCCC------------------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHHH
Confidence            1100000                  0112234588999999999999999999999999999875443

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=5e-22  Score=134.98  Aligned_cols=130  Identities=22%  Similarity=0.354  Sum_probs=93.1

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++........ .......+|..|+|||++.+..++.++||||+|++++++++ |..||.......  ....
T Consensus       148 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~  225 (287)
T 1u59_A          148 YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAF  225 (287)
T ss_dssp             EEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--HHHH
T ss_pred             CEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--HHHH
Confidence            4799999999876432221 12233456889999999987789999999999999999998 999997643321  1111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhhcc
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRNVG  151 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~~~  151 (161)
                      .......                  ..+...+..+.+++.+||..||.+|||+.+++++|+++..+......
T Consensus       226 i~~~~~~------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~  279 (287)
T 1u59_A          226 IEQGKRM------------------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVE  279 (287)
T ss_dssp             HHTTCCC------------------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCS
T ss_pred             HhcCCcC------------------CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCccc
Confidence            1111000                  00122345588999999999999999999999999999987665544

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=3.5e-22  Score=140.45  Aligned_cols=129  Identities=19%  Similarity=0.368  Sum_probs=81.6

Q ss_pred             ceeeecccccccccCCCCc--cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQS--MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~--~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||+++.+......  .......+|..|+|||++.+..++.++||||+|+++|++++ |..||........  ..
T Consensus       230 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~--~~  307 (373)
T 3c1x_A          230 TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI--TV  307 (373)
T ss_dssp             CEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH--HH
T ss_pred             CEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH--HH
Confidence            5899999999876432211  11233457788999999988889999999999999999999 6677765433221  11


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhhc
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRNV  150 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~~  150 (161)
                      ........                  ..+..++..+.+++.+||+.||.+|||+.+++++|+++........
T Consensus       308 ~~~~~~~~------------------~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~  361 (373)
T 3c1x_A          308 YLLQGRRL------------------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEH  361 (373)
T ss_dssp             HHHTTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCC
T ss_pred             HHHcCCCC------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence            11111000                  0011233458899999999999999999999999999988765443

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.84  E-value=1.2e-22  Score=138.42  Aligned_cols=139  Identities=21%  Similarity=0.318  Sum_probs=85.4

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++........ .......++..|+|||++.+..++.++||||+|++++++++|..|+.....+.....   
T Consensus       152 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~---  228 (295)
T 3ugc_A          152 RVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI---  228 (295)
T ss_dssp             EEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHH---
T ss_pred             eEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhh---
Confidence            5899999999876433221 122334577789999999888899999999999999999999988754322110000   


Q ss_pred             hhhcCCCCccccc--cccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           81 NDWLPISTMEVVD--VNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        81 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      .   .........  ...........+.+..++..+.+|+.+||+.||.+|||++++++.|+++.+++
T Consensus       229 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l  293 (295)
T 3ugc_A          229 G---NDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM  293 (295)
T ss_dssp             C---TTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             c---CccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence            0   000000000  00000000001112334566899999999999999999999999999998764

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.84  E-value=1.1e-21  Score=138.25  Aligned_cols=132  Identities=22%  Similarity=0.215  Sum_probs=85.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.....   .....||..|+|||++.+.. ++.++||||+|++++++++|+.||.+........ ...
T Consensus       180 ~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-~i~  255 (383)
T 3eb0_A          180 TLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLV-RII  255 (383)
T ss_dssp             EEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HHH
T ss_pred             cEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHH-HHH
Confidence            489999999987643222   23457899999999887654 8999999999999999999999997654332211 111


Q ss_pred             hhhc-CC---------CCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWL-PI---------STMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .... +.         ..... ..............+...+..+.+|+.+||++||.+|||+.|+++|
T Consensus       256 ~~~g~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  322 (383)
T 3eb0_A          256 QIMGTPTKEQMIRMNPHYTEV-RFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAH  322 (383)
T ss_dssp             HHHCCCCHHHHHHHCTTC--C-CCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred             HHhCCCCHHHHHHhCcccccc-cCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            1000 00         00000 0000001111111123345668999999999999999999999976

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.84  E-value=1e-22  Score=146.49  Aligned_cols=124  Identities=27%  Similarity=0.419  Sum_probs=88.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++..... .........++..|+|||++....++.++||||||++++|+++ |+.||.......  .....
T Consensus       322 ~~kl~DFG~a~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i  398 (454)
T 1qcf_A          322 VCKIADFGLARVIEDN-EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRAL  398 (454)
T ss_dssp             CEEECSTTGGGGBCCH-HHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHH
T ss_pred             cEEEeeCCCceEcCCC-ceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence            5899999999876321 1111223446788999999988889999999999999999999 999997643321  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      .....                  .+.+..++..+.+|+.+||..||++|||+.+++..|+.+....
T Consensus       399 ~~~~~------------------~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~  446 (454)
T 1qcf_A          399 ERGYR------------------MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT  446 (454)
T ss_dssp             HHTCC------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred             HcCCC------------------CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence            11100                  0011233456889999999999999999999999999886543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.84  E-value=5.2e-22  Score=138.56  Aligned_cols=119  Identities=18%  Similarity=0.164  Sum_probs=84.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......  ......+||+.|+|||++.+..++.++||||+|++++++++|..||.....+   +.....
T Consensus       171 ~vkl~Dfg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~---~~~~i~  245 (351)
T 3c0i_A          171 PVKLGGFGVAIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER---LFEGII  245 (351)
T ss_dssp             CEEECCCTTCEECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH---HHHHHH
T ss_pred             cEEEecCcceeEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH---HHHHHH
Confidence            48999999998764322  1234467999999999998888999999999999999999999999763221   111000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ....               ..........+..+.+|+.+||+.||.+|||+.++++|-.
T Consensus       246 ~~~~---------------~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~  289 (351)
T 3c0i_A          246 KGKY---------------KMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPW  289 (351)
T ss_dssp             HTCC---------------CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred             cCCC---------------CCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChh
Confidence            0000               0000001223456889999999999999999999998754

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.84  E-value=2.2e-22  Score=136.42  Aligned_cols=124  Identities=19%  Similarity=0.402  Sum_probs=87.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...... ........+|+.|++||++.+..++.++||||+|++++++++ |..||..........  ..
T Consensus       158 ~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~--~~  234 (283)
T 3gen_A          158 VVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE--HI  234 (283)
T ss_dssp             CEEECSTTGGGGBCCHH-HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH--HH
T ss_pred             CEEEccccccccccccc-cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHH--HH
Confidence            58999999998753211 111223456778999999988889999999999999999998 999987643321111  01


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      ........                  +...+..+.+++.+||+.||.+|||+++++++|.++.++.
T Consensus       235 ~~~~~~~~------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e  282 (283)
T 3gen_A          235 AQGLRLYR------------------PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE  282 (283)
T ss_dssp             HTTCCCCC------------------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             hcccCCCC------------------CCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence            10000000                  1112345889999999999999999999999999998653

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.84  E-value=1.4e-21  Score=136.51  Aligned_cols=135  Identities=19%  Similarity=0.182  Sum_probs=85.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.....   .....||+.|+|||++.+.. ++.++||||+|++++++++|..||........ +....
T Consensus       170 ~~kl~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~-~~~~~  245 (360)
T 3e3p_A          170 TLKLCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQ-LHEIV  245 (360)
T ss_dssp             EEEECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHH
T ss_pred             cEEEeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHH-HHHHH
Confidence            589999999987643222   23457899999999886655 89999999999999999999999976443221 11111


Q ss_pred             hhh-----------cCCCCc-cccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDW-----------LPISTM-EVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~-----------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ...           .+.... .....................+..+.+|+.+||++||.+|||+.++++|-.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~  317 (360)
T 3e3p_A          246 RVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPY  317 (360)
T ss_dssp             HHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGG
T ss_pred             HHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcc
Confidence            100           000000 000000000000000001124567899999999999999999999998743

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.84  E-value=2.5e-21  Score=139.99  Aligned_cols=130  Identities=12%  Similarity=0.025  Sum_probs=92.6

Q ss_pred             ceeeecccccccccCCCCc-----cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccccc--
Q 043981            2 VAHLSDFSIAKLLTGEDQS-----MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM--   74 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-----~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~--   74 (161)
                      .+||+|||+++.+......     .......||..|++||++.+..++.++||||||+++|++++|+.||........  
T Consensus       144 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~  223 (483)
T 3sv0_A          144 QVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQ  223 (483)
T ss_dssp             CEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHH
T ss_pred             eEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHH
Confidence            5899999999876543221     112356799999999999988899999999999999999999999976543211  


Q ss_pred             chhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           75 TLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      .+..........               ........++.++.+|+..||+.+|++||++.++++.|+.+....
T Consensus       224 ~~~~i~~~~~~~---------------~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~  280 (483)
T 3sv0_A          224 KYEKISEKKVAT---------------SIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE  280 (483)
T ss_dssp             HHHHHHHHHHHS---------------CHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHhhccccc---------------cHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence            111000000000               000001233466899999999999999999999999999997654

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.84  E-value=2.8e-21  Score=131.74  Aligned_cols=129  Identities=20%  Similarity=0.346  Sum_probs=89.3

Q ss_pred             ceeeecccccccccCCCC--ccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQ--SMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~--~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++.......  ........++..|++||.+.+..++.++||||+|++++++++|..|+....... .....
T Consensus       162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~-~~~~~  240 (298)
T 3pls_A          162 TVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF-DLTHF  240 (298)
T ss_dssp             CEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG-GHHHH
T ss_pred             cEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH-HHHHH
Confidence            589999999986533211  112234567889999999988889999999999999999999665543322211 11111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhh
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRN  149 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~  149 (161)
                      ........                  .+...+..+.+++.+||+.||.+|||+.++++.|+++.++....
T Consensus       241 ~~~~~~~~------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~  292 (298)
T 3pls_A          241 LAQGRRLP------------------QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD  292 (298)
T ss_dssp             HHTTCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred             hhcCCCCC------------------CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence            11111000                  01122345889999999999999999999999999998876544

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.84  E-value=2.3e-22  Score=141.19  Aligned_cols=122  Identities=11%  Similarity=0.019  Sum_probs=82.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC--CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE--GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~--~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++....     ......+|+.|+|||++.+  ..++.++||||+|++++++++|+.||............ 
T Consensus       232 ~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~-  305 (371)
T 3q60_A          232 RLMLGDVSALWKVGT-----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWK-  305 (371)
T ss_dssp             CEEECCGGGEEETTC-----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCC-
T ss_pred             CEEEEecceeeecCC-----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchh-
Confidence            589999999987531     1223557799999999977  56899999999999999999999999765432111000 


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                           ........      ......+.....+..+.+|+.+||+.||++|||+.++++|-.
T Consensus       306 -----~~~~~~~~------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~  355 (371)
T 3q60_A          306 -----RPSLRVPG------TDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPE  355 (371)
T ss_dssp             -----BCCTTSCC------CCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHH
T ss_pred             -----hhhhhhcc------ccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHH
Confidence                 00000000      000000001233456889999999999999999999987643

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.84  E-value=9.8e-22  Score=136.00  Aligned_cols=122  Identities=19%  Similarity=0.235  Sum_probs=70.1

Q ss_pred             ceeeecccccccccCCCCcc----------ccccccccccccCCCCC---CCCCCCCCccchhhhHHHHHHHhcCCCCcc
Q 043981            2 VAHLSDFSIAKLLTGEDQSM----------TQTQTLATIGYMAPEYG---REGRVSANGDVYSFGIMLMETFTGKKPTDE   68 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~----------~~~~~~g~~~~~~Pe~~---~~~~~~~~~dv~s~g~il~e~~~g~~p~~~   68 (161)
                      .+||+|||+++.........          ......||+.|++||++   .+..++.++||||+|++++++++|..||..
T Consensus       176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~  255 (337)
T 3ll6_A          176 TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFED  255 (337)
T ss_dssp             CEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             CEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcc
Confidence            58999999998764322210          11134689999999998   455688899999999999999999999865


Q ss_pred             ccccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           69 IFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      ......  .   ......            .      .....+..+.+|+.+||+.||.+|||+.+++++|+.+....
T Consensus       256 ~~~~~~--~---~~~~~~------------~------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~  310 (337)
T 3ll6_A          256 GAKLRI--V---NGKYSI------------P------PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR  310 (337)
T ss_dssp             ---------------CCC------------C------TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             hhHHHh--h---cCcccC------------C------cccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence            322110  0   000000            0      00111123678999999999999999999999999998654

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.84  E-value=1.2e-21  Score=135.26  Aligned_cols=121  Identities=20%  Similarity=0.280  Sum_probs=85.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.......  ......||+.|+|||++.+..++.++||||+|++++++++|..||.......  ......
T Consensus       179 ~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~--~~~~~~  254 (321)
T 2c30_A          179 RVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ--AMKRLR  254 (321)
T ss_dssp             CEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHH
T ss_pred             cEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHh
Confidence            579999999987643221  2344679999999999988889999999999999999999999996543221  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ...+....                .....+..+.+++.+||+.||++|||+.++++|-.-.
T Consensus       255 ~~~~~~~~----------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~  299 (321)
T 2c30_A          255 DSPPPKLK----------------NSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLL  299 (321)
T ss_dssp             HSSCCCCT----------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGG
T ss_pred             cCCCCCcC----------------ccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhc
Confidence            11110000                0112234588999999999999999999999986543

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.84  E-value=1.4e-22  Score=140.15  Aligned_cols=125  Identities=15%  Similarity=0.168  Sum_probs=68.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccccc--chhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM--TLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~--~~~~~   79 (161)
                      .+||+|||+++......  .......||+.|+|||++.+..++.++||||+|++++++++|..||........  .....
T Consensus       147 ~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~  224 (325)
T 3kn6_A          147 EIKIIDFGFARLKPPDN--QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEI  224 (325)
T ss_dssp             EEEECCCTTCEECCC------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHH
T ss_pred             cEEEeccccceecCCCC--CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHH
Confidence            58999999998754321  223446789999999999888899999999999999999999999976433211  11111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ........            ...........+..+.+|+.+||+.||.+|||+++++.|-+
T Consensus       225 ~~~i~~~~------------~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w  273 (325)
T 3kn6_A          225 MKKIKKGD------------FSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEW  273 (325)
T ss_dssp             HHHHTTTC------------CCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGG
T ss_pred             HHHHHcCC------------CCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChh
Confidence            11111000            00001112234566899999999999999999999987744

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.84  E-value=4.4e-22  Score=139.93  Aligned_cols=119  Identities=17%  Similarity=0.160  Sum_probs=85.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.+....   ......||+.|+|||++.+..++.++||||+|++++++++|..||........ +.....
T Consensus       227 ~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~i~~  302 (373)
T 2x4f_A          227 QIKIIDFGLARRYKPRE---KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET-LNNILA  302 (373)
T ss_dssp             EEEECCCSSCEECCTTC---BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHH
T ss_pred             cEEEEeCCCceecCCcc---ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHh
Confidence            58999999998764322   22345799999999999888899999999999999999999999976433211 111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ....  ..        .      ......+..+.+|+.+||+.||.+|||+.++++|-.
T Consensus       303 ~~~~--~~--------~------~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~  345 (373)
T 2x4f_A          303 CRWD--LE--------D------EEFQDISEEAKEFISKLLIKEKSWRISASEALKHPW  345 (373)
T ss_dssp             TCCC--SC--------S------GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred             ccCC--CC--------h------hhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcC
Confidence            0000  00        0      001223456889999999999999999999999754

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.84  E-value=3.9e-22  Score=138.02  Aligned_cols=115  Identities=22%  Similarity=0.191  Sum_probs=82.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCC-CCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-ANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~-~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++......   .....+||+.|+|||++.+..+. .++||||+|++++++++|+.||.+.....  +....
T Consensus       152 ~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~i  226 (328)
T 3fe3_A          152 NIKIADFGFSNEFTVGG---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKE--LRERV  226 (328)
T ss_dssp             CEEECSTTCCGGGSSSC---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHH
T ss_pred             CEEEeeccCceecCCCC---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHH--HHHHH
Confidence            58999999998764322   23456799999999999877765 78999999999999999999997643221  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      .....               ..    +...+..+.+|+.+||..||.+|||++++++|-+
T Consensus       227 ~~~~~---------------~~----p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~  267 (328)
T 3fe3_A          227 LRGKY---------------RI----PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRW  267 (328)
T ss_dssp             HHCCC---------------CC----CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTT
T ss_pred             HhCCC---------------CC----CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHh
Confidence            10000               00    1112345789999999999999999999998844

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.84  E-value=8.4e-22  Score=136.94  Aligned_cols=122  Identities=16%  Similarity=0.156  Sum_probs=81.8

Q ss_pred             ceeeecccccccccCCCC--ccccccccccccccCCCCCCC--CCCCCCccchhhhHHHHHHHhcCCCCccccccccchh
Q 043981            2 VAHLSDFSIAKLLTGEDQ--SMTQTQTLATIGYMAPEYGRE--GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~--~~~~~~~~g~~~~~~Pe~~~~--~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~   77 (161)
                      .+||+|||+++.+.....  ........||+.|+|||++.+  ..++.++||||+|++++++++|+.||...........
T Consensus       208 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~  287 (345)
T 3hko_A          208 EIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQ  287 (345)
T ss_dssp             CEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             eEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHH
Confidence            689999999987533211  112345679999999998865  5688999999999999999999999976443221111


Q ss_pred             HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           78 HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                       .......                ...+.....+..+.+|+.+||+.||.+|||+.++++|-.
T Consensus       288 -~~~~~~~----------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~  333 (345)
T 3hko_A          288 -VLNKKLC----------------FENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPW  333 (345)
T ss_dssp             -HHHCCCC----------------TTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHH
T ss_pred             -HHhcccc----------------cCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChh
Confidence             0000000                000001223456889999999999999999999998743

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.84  E-value=1.9e-21  Score=138.67  Aligned_cols=121  Identities=17%  Similarity=0.191  Sum_probs=78.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC---CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE---GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~---~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||+++.....   .......||+.|+|||++.+   ..++.++||||+|++++++++|..||........... 
T Consensus       280 ~~kl~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~-  355 (419)
T 3i6u_A          280 LIKITDFGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD-  355 (419)
T ss_dssp             CEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHH-
T ss_pred             eEEEeecccceecCCC---ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHH-
Confidence            4899999999876422   12344679999999999853   4578899999999999999999999975433221111 


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      .......               ..........+..+.+|+.+||+.||.+|||++++++|-+-
T Consensus       356 ~i~~~~~---------------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~  403 (419)
T 3i6u_A          356 QITSGKY---------------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL  403 (419)
T ss_dssp             HHHTTCC---------------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred             HHhcCCC---------------CCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCccc
Confidence            1110000               00000112334568899999999999999999999998543

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.84  E-value=1.1e-21  Score=137.12  Aligned_cols=131  Identities=21%  Similarity=0.192  Sum_probs=82.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++....     ......||+.|+|||++.+..++.++||||+|++++++++|+.||........ +.....
T Consensus       200 ~~kl~DFG~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~  273 (360)
T 3llt_A          200 GIKLIDFGCATFKSD-----YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEH-LAMMES  273 (360)
T ss_dssp             CEEECCCTTCEETTS-----CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHH
T ss_pred             CEEEEeccCceecCC-----CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHH-HHHHHH
Confidence            479999999986432     12346789999999999988899999999999999999999999976433211 100000


Q ss_pred             hhcCC-----------CCcccccccccc---chhh------------hhhhhHHHHHHHHHHHHHhcccCcccCCCHHHH
Q 043981           82 DWLPI-----------STMEVVDVNLLS---QEDI------------HFVAKEQCVSFVFNLAMACTVESPEQRINAKEI  135 (161)
Q Consensus        82 ~~~~~-----------~~~~~~~~~~~~---~~~~------------~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v  135 (161)
                      ...+.           ............   ....            ...........+.+|+.+||++||.+|||++++
T Consensus       274 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~el  353 (360)
T 3llt_A          274 IIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAEL  353 (360)
T ss_dssp             HTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             hcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHH
Confidence            00000           000000000000   0000            000001112567899999999999999999999


Q ss_pred             HHH
Q 043981          136 VTK  138 (161)
Q Consensus       136 l~~  138 (161)
                      ++|
T Consensus       354 L~h  356 (360)
T 3llt_A          354 LKH  356 (360)
T ss_dssp             TTS
T ss_pred             hcC
Confidence            876

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.84  E-value=4.9e-22  Score=136.93  Aligned_cols=124  Identities=23%  Similarity=0.419  Sum_probs=88.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............+++.|+|||++.+..++.++||||+|++++++++ |..||........  ....
T Consensus       176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--~~~~  253 (322)
T 1p4o_A          176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV--LRFV  253 (322)
T ss_dssp             CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH--HHHH
T ss_pred             eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHH--HHHH
Confidence            589999999987643222222334567889999999888889999999999999999999 8888865432211  1111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      ....   ...               .....+..+.+++.+||+.||.+|||+.+++++|+++...
T Consensus       254 ~~~~---~~~---------------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~  300 (322)
T 1p4o_A          254 MEGG---LLD---------------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP  300 (322)
T ss_dssp             HTTC---CCC---------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred             HcCC---cCC---------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence            1000   000               0112334588999999999999999999999999987653

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.84  E-value=1.8e-21  Score=139.30  Aligned_cols=122  Identities=20%  Similarity=0.314  Sum_probs=79.9

Q ss_pred             ceeeecccccccccCCCCc--cccccccccccccCCCCCCC-------CCCCCCccchhhhHHHHHHHh-cCCCCccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQS--MTQTQTLATIGYMAPEYGRE-------GRVSANGDVYSFGIMLMETFT-GKKPTDEIFN   71 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~--~~~~~~~g~~~~~~Pe~~~~-------~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~   71 (161)
                      .+||+|||+++.+......  .......||+.|+|||++.+       ..++.++||||+|++++++++ |..||.....
T Consensus       166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~  245 (434)
T 2rio_A          166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS  245 (434)
T ss_dssp             EEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT
T ss_pred             EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh
Confidence            5899999999886433221  12234679999999998865       458899999999999999998 8999865433


Q ss_pred             cccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           72 EEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ....+.   .....  ....           ........+..+.+|+.+||+.||.+|||+.++++|-
T Consensus       246 ~~~~i~---~~~~~--~~~~-----------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp  297 (434)
T 2rio_A          246 RESNII---RGIFS--LDEM-----------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP  297 (434)
T ss_dssp             HHHHHH---HTCCC--CCCC-----------TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred             hHHHHh---cCCCC--cccc-----------cccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCC
Confidence            221111   10000  0000           0001234566789999999999999999999999863

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.83  E-value=6.7e-22  Score=146.75  Aligned_cols=130  Identities=22%  Similarity=0.352  Sum_probs=89.1

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++.+...... .......+++.|+|||++.+..++.++||||||+++||+++ |..||.......  +...
T Consensus       474 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~~  551 (613)
T 2ozo_A          474 YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAF  551 (613)
T ss_dssp             EEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--HHHH
T ss_pred             cEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHH
Confidence            5899999999876432221 11223346688999999988889999999999999999998 999997644322  1111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhhcc
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRNVG  151 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~~~  151 (161)
                      ......                  ...+..++..+.+||.+||..||++|||+.++++.|+.+..+......
T Consensus       552 i~~~~~------------------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~~~  605 (613)
T 2ozo_A          552 IEQGKR------------------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVE  605 (613)
T ss_dssp             HHTTCC------------------CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCSCC
T ss_pred             HHcCCC------------------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhccccC
Confidence            111100                  001123445688999999999999999999999999998877655443

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.83  E-value=2.6e-22  Score=144.26  Aligned_cols=124  Identities=27%  Similarity=0.403  Sum_probs=83.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...... ........++..|+|||++.+..++.++||||||++++++++ |..||.......  .....
T Consensus       318 ~~kl~DfG~a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i  394 (452)
T 1fmk_A          318 VCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQV  394 (452)
T ss_dssp             CEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHH
T ss_pred             CEEECCCccceecCCCc-eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence            58999999998764321 112233456788999999988889999999999999999999 899987643321  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      .....                  .+.+..++..+.+|+.+||+.||++|||++++++.|+.+....
T Consensus       395 ~~~~~------------------~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~  442 (452)
T 1fmk_A          395 ERGYR------------------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  442 (452)
T ss_dssp             HTTCC------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             HcCCC------------------CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence            11000                  0011233456889999999999999999999999999887544

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.83  E-value=4.2e-22  Score=141.36  Aligned_cols=140  Identities=16%  Similarity=0.138  Sum_probs=78.9

Q ss_pred             ceeeecccccccccCCCC-ccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccc------
Q 043981            2 VAHLSDFSIAKLLTGEDQ-SMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEE------   73 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~-~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~------   73 (161)
                      .+||+|||+++.+..... .......+||+.|+|||++.+. .++.++||||+|++++++++|..||.......      
T Consensus       170 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~  249 (405)
T 3rgf_A          170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPY  249 (405)
T ss_dssp             CEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCC
T ss_pred             cEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccc
Confidence            589999999987643211 1223446799999999998774 48999999999999999999999997643321      


Q ss_pred             --cchhHHhhhhc-C--CCCcccccccc-------ccchhhhh--------hhhHHHHHHHHHHHHHhcccCcccCCCHH
Q 043981           74 --MTLKHWVNDWL-P--ISTMEVVDVNL-------LSQEDIHF--------VAKEQCVSFVFNLAMACTVESPEQRINAK  133 (161)
Q Consensus        74 --~~~~~~~~~~~-~--~~~~~~~~~~~-------~~~~~~~~--------~~~~~~~~~~~~l~~~cl~~dp~~Rps~~  133 (161)
                        ..+........ +  ..+........       ........        ......+..+.+|+.+||.+||.+|||++
T Consensus       250 ~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~  329 (405)
T 3rgf_A          250 HHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSE  329 (405)
T ss_dssp             CHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHH
T ss_pred             hHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHH
Confidence              01111111000 0  00000000000       00000000        00001134678999999999999999999


Q ss_pred             HHHHHHHH
Q 043981          134 EIVTKLLK  141 (161)
Q Consensus       134 ~vl~~l~~  141 (161)
                      ++++|-+-
T Consensus       330 e~L~hp~f  337 (405)
T 3rgf_A          330 QAMQDPYF  337 (405)
T ss_dssp             HHHTSGGG
T ss_pred             HHhcChhh
Confidence            99998654

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.83  E-value=3.2e-21  Score=132.29  Aligned_cols=130  Identities=16%  Similarity=0.219  Sum_probs=80.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......  .......|+..|++||++.+..++.++||||+|++++++++|..||.........+.....
T Consensus       174 ~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  251 (310)
T 2wqm_A          174 VVKLGDLGLGRFFSSKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE  251 (310)
T ss_dssp             CEEECCC--------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHH
T ss_pred             CEEEEeccceeeecCCC--ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhh
Confidence            47999999998754321  1223456899999999998888999999999999999999999998654322211211111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhhc
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRNV  150 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~~  150 (161)
                      ...   ...              ......+..+.+|+.+||..||.+|||+.+++++|+++........
T Consensus       252 ~~~---~~~--------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~  303 (310)
T 2wqm_A          252 QCD---YPP--------------LPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL  303 (310)
T ss_dssp             TTC---SCC--------------CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred             ccc---CCC--------------CcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhh
Confidence            100   000              0011233458899999999999999999999999999998665543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.83  E-value=1.6e-21  Score=134.89  Aligned_cols=136  Identities=19%  Similarity=0.129  Sum_probs=81.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++......  .......||..|+|||++.+.. ++.++||||+|++++++++|..||..............
T Consensus       175 ~~kl~Dfg~a~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~  252 (329)
T 3gbz_A          175 VLKIGDFGLARAFGIPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFE  252 (329)
T ss_dssp             EEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             eEEECcCCCccccCCcc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHH
Confidence            48999999998764221  1234457899999999987644 89999999999999999999999976543222111111


Q ss_pred             hhhcC--CCCccccc---c----ccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           81 NDWLP--ISTMEVVD---V----NLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        81 ~~~~~--~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ....+  ........   .    ................+..+.+|+.+||+.||.+|||++++++|-
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp  320 (329)
T 3gbz_A          253 VLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHP  320 (329)
T ss_dssp             HHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred             HhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCc
Confidence            10011  00000000   0    000000111111222446689999999999999999999999863

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.83  E-value=2.2e-21  Score=135.29  Aligned_cols=139  Identities=17%  Similarity=0.203  Sum_probs=86.5

Q ss_pred             ceeeecccccccccCCCC--ccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccc--h
Q 043981            2 VAHLSDFSIAKLLTGEDQ--SMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMT--L   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~--~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~--~   76 (161)
                      .+||+|||+++.+.....  ........||+.|+|||++.+. .++.++||||+|++++++++|..||.........  +
T Consensus       162 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  241 (351)
T 3mi9_A          162 VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI  241 (351)
T ss_dssp             CEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             CEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            589999999987642211  1223446789999999988764 4899999999999999999999999775433221  1


Q ss_pred             hHHhhhhcCCCCccccccccc------cc--hhh-hhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLL------SQ--EDI-HFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~------~~--~~~-~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ........+............      ..  ... ........++.+.+|+.+||+.||.+|||++|+++|-.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  314 (351)
T 3mi9_A          242 SQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF  314 (351)
T ss_dssp             HHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             HHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCC
Confidence            111111111111111000000      00  000 00001112456889999999999999999999999854

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.83  E-value=2.7e-21  Score=131.54  Aligned_cols=115  Identities=20%  Similarity=0.342  Sum_probs=80.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....    ......|++.|+|||++. ..++.++||||+|++++++++|..||...............
T Consensus       170 ~~kl~Dfg~~~~~~~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~  244 (290)
T 1t4h_A          170 SVKIGDLGLATLKRAS----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS  244 (290)
T ss_dssp             CEEECCTTGGGGCCTT----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT
T ss_pred             CEEEeeCCCccccccc----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhc
Confidence            5799999999764321    223457899999999886 45899999999999999999999999664332222111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ...+    .              ......++.+.+|+.+||+.||.+|||+.++++|-
T Consensus       245 ~~~~----~--------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~  284 (290)
T 1t4h_A          245 GVKP----A--------------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHA  284 (290)
T ss_dssp             TCCC----G--------------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred             cCCc----c--------------ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCc
Confidence            0000    0              00111224588999999999999999999999873

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.83  E-value=4.1e-22  Score=140.64  Aligned_cols=118  Identities=19%  Similarity=0.211  Sum_probs=83.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......   ......||+.|+|||++.+..++.++||||+|++++++++|..||........ +.. ..
T Consensus       189 ~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~-~~~-i~  263 (387)
T 1kob_A          189 SVKIIDFGLATKLNPDE---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET-LQN-VK  263 (387)
T ss_dssp             CEEECCCTTCEECCTTS---CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHH-HH
T ss_pred             ceEEEecccceecCCCc---ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHH-HHH-HH
Confidence            48999999998764322   22345799999999999888899999999999999999999999976432111 111 11


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ... ...    ..          ......+..+.+|+.+||..||.+|||+.++++|-
T Consensus       264 ~~~-~~~----~~----------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp  306 (387)
T 1kob_A          264 RCD-WEF----DE----------DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP  306 (387)
T ss_dssp             HCC-CCC----CS----------STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTST
T ss_pred             hCC-CCC----Cc----------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCc
Confidence            000 000    00          00112344588999999999999999999999874

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.83  E-value=2.2e-21  Score=133.12  Aligned_cols=133  Identities=21%  Similarity=0.234  Sum_probs=78.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++....... .......|+..|++||++.+..++.++||||+|++++++++|..||......  .+.....
T Consensus       172 ~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~  248 (309)
T 2h34_A          172 FAYLVDFGIASATTDEKL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHIN  248 (309)
T ss_dssp             CEEECSCCC-----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHH
T ss_pred             CEEEecCccCcccccccc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhc
Confidence            479999999987543211 1223457899999999998888999999999999999999999999764322  1111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-CHHHHHHHHHHhHHHhhhhccCc
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-NAKEIVTKLLKIRDSLLRNVGGR  153 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-s~~~vl~~l~~~~~~~~~~~~~~  153 (161)
                      ...+.                ........+..+.+++.+||+.||.+|| |++++++.|+++...........
T Consensus       249 ~~~~~----------------~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~~~~~~~  305 (309)
T 2h34_A          249 QAIPR----------------PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATADQDRATD  305 (309)
T ss_dssp             SCCCC----------------GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---------
T ss_pred             cCCCC----------------ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhcccchhh
Confidence            00000                0000122334588999999999999999 89999999999887665554443

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.83  E-value=1.6e-21  Score=132.39  Aligned_cols=124  Identities=24%  Similarity=0.363  Sum_probs=89.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++....... .......++..|+|||++.+..++.++||||+|++++++++ |..||.......  .....
T Consensus       149 ~~~l~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~--~~~~~  225 (288)
T 3kfa_A          149 LVKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELL  225 (288)
T ss_dssp             CEEECCCCGGGTSCSSSS-EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHH
T ss_pred             CEEEccCccceeccCCcc-ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence            479999999987643222 22333557788999999988889999999999999999999 889986643321  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      ......                  ..+...+..+.+|+.+||..||.+|||+.++++.|+++..+.
T Consensus       226 ~~~~~~------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~  273 (288)
T 3kfa_A          226 EKDYRM------------------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES  273 (288)
T ss_dssp             HTTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             hccCCC------------------CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence            110000                  001123345889999999999999999999999999988754

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.83  E-value=1.7e-21  Score=131.49  Aligned_cols=120  Identities=23%  Similarity=0.306  Sum_probs=84.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCC-CCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~-~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||++..+.............|+..|++||++.+..+ +.++||||+|++++++++|..||.........+..+.
T Consensus       143 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  222 (276)
T 2yex_A          143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK  222 (276)
T ss_dssp             CEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHH
T ss_pred             CEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhh
Confidence            479999999987643222222344678999999999887665 6789999999999999999999976544322222211


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ......                  ......+..+.+|+.+||+.||.+|||+.++++|-
T Consensus       223 ~~~~~~------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~  263 (276)
T 2yex_A          223 EKKTYL------------------NPWKKIDSAPLALLHKILVENPSARITIPDIKKDR  263 (276)
T ss_dssp             TTCTTS------------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCT
T ss_pred             hccccc------------------CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCc
Confidence            110000                  00112334578999999999999999999998863

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.83  E-value=2.5e-21  Score=133.33  Aligned_cols=135  Identities=22%  Similarity=0.207  Sum_probs=84.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.......  ......||+.|+|||++.+. .++.++||||+|++++++++|..||........ +....
T Consensus       146 ~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~  222 (317)
T 2pmi_A          146 QLKLGDFGLARAFGIPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQ-LKLIF  222 (317)
T ss_dssp             CEEECCCSSCEETTSCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHH
T ss_pred             CEEECcCccceecCCCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHH
Confidence            589999999987642211  22345789999999998764 589999999999999999999999976443221 11111


Q ss_pred             hh--hcCC-CCcccccc-----ccc------cchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           81 ND--WLPI-STMEVVDV-----NLL------SQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        81 ~~--~~~~-~~~~~~~~-----~~~------~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ..  ..+. ........     ...      .............+..+.+|+.+||+.||++|||++++++|-
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp  295 (317)
T 2pmi_A          223 DIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHP  295 (317)
T ss_dssp             HHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSG
T ss_pred             HHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCCh
Confidence            00  0000 00000000     000      000000000112345689999999999999999999999873

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.83  E-value=1.5e-21  Score=141.48  Aligned_cols=118  Identities=18%  Similarity=0.185  Sum_probs=82.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.+....   .....+||+.|+|||++.+ .++.++||||+|++++++++|..||........  .....
T Consensus       162 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~i~  235 (486)
T 3mwu_A          162 DIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI--LKRVE  235 (486)
T ss_dssp             CEEECSCSCTTTBCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH
T ss_pred             CEEEEECCcCeECCCCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHH
Confidence            58999999998764322   2344679999999999875 589999999999999999999999976433211  11111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ....               ....+.....+..+.+|+.+||+.||.+|||+.++++|-+
T Consensus       236 ~~~~---------------~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~  279 (486)
T 3mwu_A          236 TGKY---------------AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPW  279 (486)
T ss_dssp             HTCC---------------CSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHH
T ss_pred             hCCC---------------CCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHh
Confidence            1000               0000111233456889999999999999999999999854

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.83  E-value=3.5e-21  Score=133.69  Aligned_cols=116  Identities=21%  Similarity=0.261  Sum_probs=83.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......  ......+||+.|+|||++.+..++.++|+||+|++++++++|..||.......  +.....
T Consensus       143 ~vkL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~i~  218 (337)
T 1o6l_A          143 HIKITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--LFELIL  218 (337)
T ss_dssp             CEEECCCTTCBCSCCTT--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH
T ss_pred             CEEEeeccchhhcccCC--CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH--HHHHHH
Confidence            58999999998643221  22345689999999999998889999999999999999999999997543221  111110


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~l~  140 (161)
                      .. ...              .    +...+..+.+|+.+||+.||.+||     +++++++|-.
T Consensus       219 ~~-~~~--------------~----p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~  263 (337)
T 1o6l_A          219 ME-EIR--------------F----PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF  263 (337)
T ss_dssp             HC-CCC--------------C----CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred             cC-CCC--------------C----CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCC
Confidence            00 000              0    112234588999999999999999     8999998843

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.83  E-value=7.1e-22  Score=133.90  Aligned_cols=120  Identities=17%  Similarity=0.169  Sum_probs=85.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||++.......   ......|++.|+|||++.+..++.++||||+|++++++++|..||........  .....
T Consensus       146 ~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~  220 (284)
T 3kk8_A          146 AVKLADFGLAIEVNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL--YAQIK  220 (284)
T ss_dssp             CEEECCCTTCEECCSSC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH
T ss_pred             cEEEeeceeeEEcccCc---cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHH--HHHHH
Confidence            48999999998764322   22346789999999999888899999999999999999999999965433211  11111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      .....               .........+..+.+|+.+||+.||++|||+.++++|-.-
T Consensus       221 ~~~~~---------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~  265 (284)
T 3kk8_A          221 AGAYD---------------YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI  265 (284)
T ss_dssp             HTCCC---------------CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHH
T ss_pred             hcccc---------------CCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccc
Confidence            00000               0000011233458899999999999999999999998543

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.83  E-value=6.4e-22  Score=143.68  Aligned_cols=122  Identities=25%  Similarity=0.371  Sum_probs=87.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++..... .........++..|+|||++.+..++.++||||||++++|+++ |..||.......  +....
T Consensus       356 ~~kl~DFG~a~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~--~~~~~  432 (495)
T 1opk_A          356 LVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYELL  432 (495)
T ss_dssp             CEEECCTTCEECCTTC-CEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHHH
T ss_pred             cEEEeecccceeccCC-ceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence            5899999999876432 1122233456788999999988889999999999999999998 889987643321  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                      .....                  ...+..++..+.+|+.+||+.||.+|||+.++++.|+.+.+
T Consensus       433 ~~~~~------------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          433 EKDYR------------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             HTTCC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred             HcCCC------------------CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence            11000                  00112334568899999999999999999999999998753

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.83  E-value=9.6e-22  Score=135.07  Aligned_cols=122  Identities=25%  Similarity=0.397  Sum_probs=78.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-----------CCCCCCccchhhhHHHHHHHhcCCCCcccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-----------GRVSANGDVYSFGIMLMETFTGKKPTDEIF   70 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-----------~~~~~~~dv~s~g~il~e~~~g~~p~~~~~   70 (161)
                      .+||+|||+++.+.............|++.|+|||++.+           ..++.++||||+|++++++++|..||....
T Consensus       164 ~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  243 (313)
T 3cek_A          164 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  243 (313)
T ss_dssp             EEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             eEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH
Confidence            479999999987643322222344578999999998865           357889999999999999999999996543


Q ss_pred             ccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           71 NEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      .....+............                  +...+..+.+++.+||+.||.+|||+.++++|-.-
T Consensus       244 ~~~~~~~~~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~  296 (313)
T 3cek_A          244 NQISKLHAIIDPNHEIEF------------------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV  296 (313)
T ss_dssp             SHHHHHHHHHCTTSCCCC------------------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred             HHHHHHHHHHhcccccCC------------------cccchHHHHHHHHHHccCCcccCcCHHHHhcCccc
Confidence            322222111110000000                  01112358899999999999999999999998653

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.83  E-value=7.8e-22  Score=136.36  Aligned_cols=134  Identities=13%  Similarity=0.097  Sum_probs=84.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.......   .....|+..|++||++.+ ..++.++||||+|++++++++|..||.........+....
T Consensus       169 ~~kl~Dfg~a~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~  245 (330)
T 3nsz_A          169 KLRLIDWGLAEFYHPGQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA  245 (330)
T ss_dssp             EEEECCCTTCEECCTTCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHH
T ss_pred             EEEEEeCCCceEcCCCCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHH
Confidence            589999999987643222   234578999999999876 5589999999999999999999999855433222111111


Q ss_pred             hh------------hcCCCCcc---cccccc--ccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 ND------------WLPISTME---VVDVNL--LSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~------------~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ..            ........   ......  ..............+..+.+|+.+||++||.+|||++++++|
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h  320 (330)
T 3nsz_A          246 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  320 (330)
T ss_dssp             HHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             HhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            00            00000000   000000  000000000112245668999999999999999999999987

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.83  E-value=5.8e-22  Score=147.55  Aligned_cols=125  Identities=23%  Similarity=0.358  Sum_probs=86.8

Q ss_pred             ceeeecccccccccCCCC-ccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQ-SMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~-~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++.+..... ........+|..|+|||++.+..++.++||||||++++|+++ |+.||.......  +...
T Consensus       507 ~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~~  584 (635)
T 4fl3_A          507 YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAM  584 (635)
T ss_dssp             EEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHH
T ss_pred             CEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH
Confidence            589999999987643322 122233456788999999988889999999999999999998 999997644322  1111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      .......                  ..+..++..+.+||.+||+.||++|||+.++++.|+.+..++
T Consensus       585 i~~~~~~------------------~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l  633 (635)
T 4fl3_A          585 LEKGERM------------------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV  633 (635)
T ss_dssp             HHTTCCC------------------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             HHcCCCC------------------CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence            1111000                  001233456889999999999999999999999999988765

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.83  E-value=3.9e-22  Score=137.39  Aligned_cols=142  Identities=17%  Similarity=0.267  Sum_probs=91.3

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++........ .......++..|++||++.+..++.++||||+|++++++++|..||..............
T Consensus       172 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~  251 (318)
T 3lxp_A          172 LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIA  251 (318)
T ss_dssp             CEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSC
T ss_pred             CEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhccc
Confidence            4899999999886543221 122345678889999999888889999999999999999999999865332211110000


Q ss_pred             hhhcC-CCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhh
Q 043981           81 NDWLP-ISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRN  149 (161)
Q Consensus        81 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~  149 (161)
                      ..... .........      .........++..+.+|+.+||+.||.+|||+.++++.|+++.+.....
T Consensus       252 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~  315 (318)
T 3lxp_A          252 QGQMTVLRLTELLER------GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ  315 (318)
T ss_dssp             CHHHHHHHHHHHHHT------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred             ccchhHHHHHHHHhc------ccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence            00000 000000000      0000111233456899999999999999999999999999998876543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.83  E-value=9.9e-22  Score=135.72  Aligned_cols=137  Identities=15%  Similarity=0.102  Sum_probs=81.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHH-
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW-   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~-   79 (161)
                      .+||+|||+++.....  ........||..|+|||++.+ ..++.++||||+|++++++++|..||............. 
T Consensus       138 ~~kl~Dfg~a~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~  215 (324)
T 3mtl_A          138 ELKLADFGLARAKSIP--TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFR  215 (324)
T ss_dssp             CEEECSSSEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CEEEccCcccccccCC--ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            5799999999865322  122334578999999998876 458999999999999999999999997754332211100 


Q ss_pred             -hhhhcCCCCccccccccc-----c--chhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           80 -VNDWLPISTMEVVDVNLL-----S--QEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        80 -~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                       ..................     .  ............+..+.+|+.+||++||.+|||++|+++|-.
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  284 (324)
T 3mtl_A          216 ILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPF  284 (324)
T ss_dssp             HHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred             HhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChh
Confidence             000011111111100000     0  000000111233456889999999999999999999998754

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.83  E-value=2.4e-21  Score=134.91  Aligned_cols=134  Identities=20%  Similarity=0.152  Sum_probs=85.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccch-hHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL-KHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~-~~~~   80 (161)
                      .+||+|||+++....     ......||+.|+|||++.+..++.++||||+|++++++++|..||.......... ....
T Consensus       180 ~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~  254 (355)
T 2eu9_A          180 SIRVADFGSATFDHE-----HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKI  254 (355)
T ss_dssp             CEEECCCTTCEETTS-----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             cEEEeecCccccccc-----cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            579999999986432     1234578999999999988889999999999999999999999997654322111 0000


Q ss_pred             hhhcCCC------Ccccccc------cc----------ccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLPIS------TMEVVDV------NL----------LSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~~~------~~~~~~~------~~----------~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ....+..      .......      ..          ..............+..+.+|+.+||+.||++|||+.++++|
T Consensus       255 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h  334 (355)
T 2eu9_A          255 LGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLH  334 (355)
T ss_dssp             HCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             cCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            0000000      0000000      00          000000001122345678999999999999999999999987


Q ss_pred             HH
Q 043981          139 LL  140 (161)
Q Consensus       139 l~  140 (161)
                      -.
T Consensus       335 p~  336 (355)
T 2eu9_A          335 PF  336 (355)
T ss_dssp             GG
T ss_pred             hh
Confidence            43

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.83  E-value=8.1e-22  Score=136.25  Aligned_cols=127  Identities=23%  Similarity=0.305  Sum_probs=88.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++....   ........++..|++||++.+..++.++||||+|++++++++ |..||.......  +....
T Consensus       180 ~~kL~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--~~~~~  254 (327)
T 1fvr_A          180 VAKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--LYEKL  254 (327)
T ss_dssp             CEEECCTTCEESSCE---ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHG
T ss_pred             eEEEcccCcCccccc---cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHH--HHHHh
Confidence            579999999975321   111233456788999999987788999999999999999998 999986643221  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhhcc
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRNVG  151 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~~~  151 (161)
                      ......                  ..+...+..+.+|+.+||..||.+|||+.+++++|.++.+.......
T Consensus       255 ~~~~~~------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~  307 (327)
T 1fvr_A          255 PQGYRL------------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVN  307 (327)
T ss_dssp             GGTCCC------------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCSBC
T ss_pred             hcCCCC------------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcCccc
Confidence            100000                  00112234588999999999999999999999999999886554443

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.83  E-value=1.6e-21  Score=133.09  Aligned_cols=128  Identities=22%  Similarity=0.328  Sum_probs=84.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++....... .......||+.|+|||++.+..++.++||||+|++++++++|+.||.............  
T Consensus       149 ~~kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~--  225 (294)
T 4eqm_A          149 TLKIFDFGIAKALSETSL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHI--  225 (294)
T ss_dssp             CEEECCCSSSTTC--------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHH--
T ss_pred             CEEEEeCCCccccccccc-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHh--
Confidence            479999999987643211 22334579999999999988889999999999999999999999997643322111100  


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-CHHHHHHHHHHhHHHh
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-NAKEIVTKLLKIRDSL  146 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-s~~~vl~~l~~~~~~~  146 (161)
                        . ....           ..........+..+.+++.+||+.||.+|| +++++.+.|..+....
T Consensus       226 --~-~~~~-----------~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~  277 (294)
T 4eqm_A          226 --Q-DSVP-----------NVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN  277 (294)
T ss_dssp             --S-SCCC-----------CHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred             --h-ccCC-----------CcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence              0 0000           000001123345688999999999999999 8999999988876543

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.83  E-value=2.1e-21  Score=133.43  Aligned_cols=112  Identities=16%  Similarity=0.139  Sum_probs=77.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......   ......||+.|+|||++.+ .++.++||||+|++++++++|..++.....    ......
T Consensus       195 ~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~----~~~~~~  266 (311)
T 3p1a_A          195 RCKLGDFGLLVELGTAG---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG----WQQLRQ  266 (311)
T ss_dssp             CEEECCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH----HHHHTT
T ss_pred             CEEEccceeeeecccCC---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH----HHHHhc
Confidence            58999999998764321   2234568999999998875 789999999999999999999766543211    110000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                          ..              .........+..+.+|+.+||+.||++|||++++++|-
T Consensus       267 ----~~--------------~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp  306 (311)
T 3p1a_A          267 ----GY--------------LPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALP  306 (311)
T ss_dssp             ----TC--------------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred             ----cC--------------CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCc
Confidence                00              00001223345689999999999999999999999763

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.83  E-value=1.3e-21  Score=132.90  Aligned_cols=120  Identities=20%  Similarity=0.262  Sum_probs=74.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCC----CCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYG----REGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~----~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~   77 (161)
                      .+||+|||+++......   ......||+.|+|||++    .+..++.++||||+|++++++++|..||.........+.
T Consensus       148 ~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~  224 (290)
T 3fme_A          148 QVKMCDFGISGYLVDDV---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK  224 (290)
T ss_dssp             CEEBCCC------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHH
T ss_pred             CEEEeecCCcccccccc---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHH
Confidence            57999999998764321   22334689999999985    455688999999999999999999999975433222222


Q ss_pred             HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           78 HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      .......+...                  ....+..+.+|+.+||+.||.+|||+.++++|-.--
T Consensus       225 ~~~~~~~~~~~------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~  271 (290)
T 3fme_A          225 QVVEEPSPQLP------------------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFT  271 (290)
T ss_dssp             HHHHSCCCCCC------------------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             HHhccCCCCcc------------------cccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccc
Confidence            11111110000                  112234588999999999999999999999976543

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.83  E-value=2.2e-21  Score=137.37  Aligned_cols=141  Identities=14%  Similarity=0.136  Sum_probs=91.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC--------CCCCCCccchhhhHHHHHHHhcCCCCccccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE--------GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEE   73 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~--------~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~   73 (161)
                      .+||+|||+++.....   .......||..|+|||++.+        ..++.++||||+|++++++++|+.||.......
T Consensus       154 ~~kL~DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~  230 (396)
T 4eut_A          154 VYKLTDFGAARELEDD---EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR  230 (396)
T ss_dssp             EEEECCGGGCEECCCG---GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTT
T ss_pred             eEEEecCCCceEccCC---CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCccc
Confidence            4799999999876432   12234679999999998754        347788999999999999999999997543322


Q ss_pred             c--chhHHhhhhcCC-CCccccccc-----cccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           74 M--TLKHWVNDWLPI-STMEVVDVN-----LLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        74 ~--~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      .  ..........+. .........     ...............+..+.+++.+||+.||++|||+.++++.+..+...
T Consensus       231 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          231 RNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             TCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             chHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence            1  111111111111 111000000     00000111112356677889999999999999999999999999888764

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.83  E-value=1.1e-20  Score=133.19  Aligned_cols=115  Identities=23%  Similarity=0.289  Sum_probs=80.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC---CCCCCCccchhhhHHHHHHHhcCCCCcccccccc-chh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE---GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM-TLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~---~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~-~~~   77 (161)
                      .+||+|||+++.+...   ......+||+.|+|||++..   ..++.++|+||+|++++++++|..||........ ...
T Consensus       153 ~vkL~DFG~a~~~~~~---~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~  229 (384)
T 4fr4_A          153 HVHITDFNIAAMLPRE---TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV  229 (384)
T ss_dssp             CEEECCCTTCEECCTT---CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHH
T ss_pred             CEEEeccceeeeccCC---CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHH
Confidence            5899999999876432   22345689999999999864   3489999999999999999999999975433221 111


Q ss_pred             HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCC-HHHHHHH
Q 043981           78 HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRIN-AKEIVTK  138 (161)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-~~~vl~~  138 (161)
                      ....... ..                  .+...+..+.+|+.+||+.||.+||+ +++++.|
T Consensus       230 ~~~~~~~-~~------------------~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h  272 (384)
T 4fr4_A          230 HTFETTV-VT------------------YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF  272 (384)
T ss_dssp             HHHHHCC-CC------------------CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred             HHHhhcc-cC------------------CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence            1100000 00                  01122345889999999999999998 7777664

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.83  E-value=5.3e-21  Score=136.76  Aligned_cols=119  Identities=19%  Similarity=0.286  Sum_probs=77.0

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCC---CCCCCCccchhhhHHHHHHHh-cCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGRE---GRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~---~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||+++.+...... .......||+.|+|||++.+   ..++.++||||+|++++++++ |..||..........
T Consensus       161 ~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~  240 (432)
T 3p23_A          161 KAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI  240 (432)
T ss_dssp             CEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH
T ss_pred             eEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH
Confidence            4789999999876432211 22344679999999999873   457788999999999999999 888885432221111


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .   ....   .....     .       ........+.+|+.+||+.||.+|||+.++++|
T Consensus       241 ~---~~~~---~~~~~-----~-------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h  284 (432)
T 3p23_A          241 L---LGAC---SLDCL-----H-------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH  284 (432)
T ss_dssp             H---TTCC---CCTTS-----C-------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             H---hccC---Ccccc-----C-------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence            0   0000   00000     0       012334457899999999999999999999976

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.83  E-value=2.6e-21  Score=139.31  Aligned_cols=61  Identities=23%  Similarity=0.292  Sum_probs=44.2

Q ss_pred             ceeeecccccccccCCCCc-------------------------cccccccccccccCCCCC-CCCCCCCCccchhhhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQS-------------------------MTQTQTLATIGYMAPEYG-REGRVSANGDVYSFGIM   55 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-------------------------~~~~~~~g~~~~~~Pe~~-~~~~~~~~~dv~s~g~i   55 (161)
                      .+||+|||+++........                         ......+||++|+|||++ .+..++.++||||+||+
T Consensus       194 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~i  273 (458)
T 3rp9_A          194 SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCI  273 (458)
T ss_dssp             CEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHH
T ss_pred             CEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHH
Confidence            5899999999876422110                         112345789999999975 45569999999999999


Q ss_pred             HHHHHhc
Q 043981           56 LMETFTG   62 (161)
Q Consensus        56 l~e~~~g   62 (161)
                      ++||++|
T Consensus       274 l~elltg  280 (458)
T 3rp9_A          274 FAELLNM  280 (458)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHHh
Confidence            9999983

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.83  E-value=7.3e-22  Score=136.55  Aligned_cols=119  Identities=17%  Similarity=0.178  Sum_probs=81.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......   ......||+.|+|||++.+..++.++||||+|++++++++|..||............  .
T Consensus       172 ~~kL~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i--~  246 (327)
T 3lm5_A          172 DIKIVDFGMSRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNI--S  246 (327)
T ss_dssp             CEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH--H
T ss_pred             cEEEeeCccccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHH--H
Confidence            57999999998764321   223467999999999998888999999999999999999999999764332211110  0


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ..... .              ........+..+.+|+.+||+.||.+|||++++++|-.
T Consensus       247 ~~~~~-~--------------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~  290 (327)
T 3lm5_A          247 QVNVD-Y--------------SEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSW  290 (327)
T ss_dssp             HTCCC-C--------------CTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGG
T ss_pred             hcccc-c--------------CchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHh
Confidence            00000 0              00001223445889999999999999999999998844

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.83  E-value=1.4e-21  Score=137.40  Aligned_cols=125  Identities=23%  Similarity=0.411  Sum_probs=77.2

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++........ .......++..|+|||++.+..++.++||||||++++++++ |..||.......  ....
T Consensus       185 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~--~~~~  262 (373)
T 2qol_A          185 VCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--VIKA  262 (373)
T ss_dssp             CEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH--HHHH
T ss_pred             CEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH
Confidence            5899999999876432211 11122345678999999988889999999999999999997 999986543221  1111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      ......                  .+....++..+.+++.+||+.||.+|||+.++++.|+++....
T Consensus       263 i~~~~~------------------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~  311 (373)
T 2qol_A          263 VDEGYR------------------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP  311 (373)
T ss_dssp             HHTTEE------------------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred             HHcCCC------------------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence            110000                  0001123345889999999999999999999999999998654

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.82  E-value=5.3e-22  Score=137.15  Aligned_cols=142  Identities=22%  Similarity=0.256  Sum_probs=87.9

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++........ .......|+..|+|||++.+..++.++||||+|++++++++|..||..............
T Consensus       165 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~  244 (327)
T 3lxl_A          165 HVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCE  244 (327)
T ss_dssp             EEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC--
T ss_pred             CEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccc
Confidence            4799999999876433221 122335678889999999888889999999999999999999999865332211000000


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR  148 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~  148 (161)
                      .  ...........   .........+..++..+.+|+.+||+.||.+|||+.+++++|+.+......
T Consensus       245 ~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~  307 (327)
T 3lxl_A          245 R--DVPALSRLLEL---LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRG  307 (327)
T ss_dssp             ----CCHHHHHHHH---HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC------
T ss_pred             c--ccccHHHHHHH---hhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcC
Confidence            0  00000000000   000000011223445689999999999999999999999999999865443

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.82  E-value=1.9e-21  Score=134.13  Aligned_cols=119  Identities=16%  Similarity=0.195  Sum_probs=84.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......   ......||+.|+|||++.+..++.++||||+|++++++++|..||........ +.. ..
T Consensus       157 ~~kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~-i~  231 (321)
T 2a2a_A          157 HIKLIDFGLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LAN-IT  231 (321)
T ss_dssp             CEEECCCTTCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHH-HH
T ss_pred             CEEEccCccceecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHH-HHH-HH
Confidence            58999999998764322   22345789999999999888899999999999999999999999965432211 110 00


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ....               ..........+..+.+|+.+||..||.+|||+.++++|-.
T Consensus       232 ~~~~---------------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~  275 (321)
T 2a2a_A          232 SVSY---------------DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW  275 (321)
T ss_dssp             TTCC---------------CCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTT
T ss_pred             hccc---------------ccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence            0000               0000001223455889999999999999999999998743

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.82  E-value=3.5e-21  Score=135.04  Aligned_cols=134  Identities=12%  Similarity=0.111  Sum_probs=84.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccccc-----ch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM-----TL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~-----~~   76 (161)
                      .+||+|||+++.....     .....||+.|+|||++.+..++.++||||+|++++++++|..||........     .+
T Consensus       176 ~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~  250 (373)
T 1q8y_A          176 QIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHI  250 (373)
T ss_dssp             EEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHH
T ss_pred             eEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHH
Confidence            5899999999876321     2335789999999999888899999999999999999999999976432111     11


Q ss_pred             hHHhhhhcC--C----------------C-Ccccccccccc---chhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHH
Q 043981           77 KHWVNDWLP--I----------------S-TMEVVDVNLLS---QEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKE  134 (161)
Q Consensus        77 ~~~~~~~~~--~----------------~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~  134 (161)
                      .........  .                . ...........   ............+..+.+|+.+||+.||.+|||+++
T Consensus       251 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  330 (373)
T 1q8y_A          251 AQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGG  330 (373)
T ss_dssp             HHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHH
T ss_pred             HHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHH
Confidence            111100000  0                0 00000000000   000011123466778999999999999999999999


Q ss_pred             HHHHHH
Q 043981          135 IVTKLL  140 (161)
Q Consensus       135 vl~~l~  140 (161)
                      +++|-.
T Consensus       331 ll~hp~  336 (373)
T 1q8y_A          331 LVNHPW  336 (373)
T ss_dssp             HHTCGG
T ss_pred             HhhChh
Confidence            999754

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.82  E-value=7.1e-22  Score=143.06  Aligned_cols=119  Identities=17%  Similarity=0.206  Sum_probs=84.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.+....   .....+||+.|+|||++.+ .++.++||||+|++++++++|..||.......  ......
T Consensus       167 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i~  240 (484)
T 3nyv_A          167 NIRIIDFGLSTHFEASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD--ILKKVE  240 (484)
T ss_dssp             CEEECCTTHHHHBCCCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH
T ss_pred             cEEEEeeeeeEEccccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHH
Confidence            58999999998764322   2344679999999999865 68999999999999999999999997643321  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ....               ....+.....+..+.+|+.+||+.||.+|||+.++++|-+-
T Consensus       241 ~~~~---------------~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~  285 (484)
T 3nyv_A          241 KGKY---------------TFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI  285 (484)
T ss_dssp             HCCC---------------CCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHH
T ss_pred             cCCC---------------CCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhh
Confidence            1000               00001112334568899999999999999999999998653

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.82  E-value=1.3e-21  Score=136.17  Aligned_cols=123  Identities=19%  Similarity=0.186  Sum_probs=85.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccc-cchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEE-MTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~-~~~~~~~   80 (161)
                      .+||+|||+++.......  .....+||+.|+|||++.+..++.++||||+|++++++++|..||....... ..+....
T Consensus       158 ~~kl~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i  235 (342)
T 2qr7_A          158 SIRICDFGFAKQLRAENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARI  235 (342)
T ss_dssp             GEEECCCTTCEECBCTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHH
T ss_pred             eEEEEECCCcccCcCCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHH
Confidence            489999999987643222  2344678999999999987778899999999999999999999997532211 1111111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ...... .        ..      ......+..+.+|+.+||..||++|||+.++++|-+-
T Consensus       236 ~~~~~~-~--------~~------~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~  281 (342)
T 2qr7_A          236 GSGKFS-L--------SG------GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI  281 (342)
T ss_dssp             HHCCCC-C--------CS------TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred             ccCCcc-c--------Cc------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCee
Confidence            110000 0        00      0012234558899999999999999999999998664

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.82  E-value=1.1e-21  Score=138.66  Aligned_cols=120  Identities=18%  Similarity=0.207  Sum_probs=81.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccc----hh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMT----LK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~----~~   77 (161)
                      .+||+|||+++.....  .......+||+.|+|||++.+..++.++|+||+|+++++|++|..||.........    ..
T Consensus       191 ~ikL~DFGla~~~~~~--~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~  268 (396)
T 4dc2_A          191 HIKLTDYGMCKEGLRP--GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED  268 (396)
T ss_dssp             CEEECCCTTCBCCCCT--TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHH
T ss_pred             CEEEeecceeeecccC--CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHH
Confidence            5899999999863321  22345578999999999999889999999999999999999999999653221110    00


Q ss_pred             HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH------HHHHHHH
Q 043981           78 HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA------KEIVTKL  139 (161)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~------~~vl~~l  139 (161)
                      .........            ...    .+...+..+.+|+.+||+.||.+||++      ++++.|-
T Consensus       269 ~~~~~i~~~------------~~~----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hp  320 (396)
T 4dc2_A          269 YLFQVILEK------------QIR----IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP  320 (396)
T ss_dssp             HHHHHHHHC------------CCC----CCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHST
T ss_pred             HHHHHHhcc------------ccC----CCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCc
Confidence            000000000            000    011234458899999999999999986      6777764

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.82  E-value=1.9e-21  Score=131.56  Aligned_cols=120  Identities=27%  Similarity=0.392  Sum_probs=81.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.....     .....++..|+|||++.+..++.++||||+|++++++++ |..||.......  .....
T Consensus       155 ~~~l~Dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~~~~  227 (278)
T 1byg_A          155 VAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRV  227 (278)
T ss_dssp             CEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--HHHHH
T ss_pred             cEEEeecccccccccc-----ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence            4799999999765321     122457889999999988889999999999999999998 999986543221  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      .....                  .......+..+.+++.+||..||.+|||+.++++.|+++....
T Consensus       228 ~~~~~------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~  275 (278)
T 1byg_A          228 EKGYK------------------MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE  275 (278)
T ss_dssp             TTTCC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             hcCCC------------------CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence            10000                  0001223455889999999999999999999999999998754

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.82  E-value=9.2e-22  Score=132.21  Aligned_cols=123  Identities=26%  Similarity=0.432  Sum_probs=86.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++..... .........++..|+|||++.+..++.++||||+|++++++++ |..||.......  .....
T Consensus       142 ~~kl~dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~i  218 (267)
T 3t9t_A          142 VIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVEDI  218 (267)
T ss_dssp             CEEECCTTGGGGBCCH-HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHH
T ss_pred             CEEEcccccccccccc-cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH--HHHHH
Confidence            4799999999875321 1111223456788999999987789999999999999999999 899986533221  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      .......                  .+...+..+.+++.+||+.||.+|||+.+++++|.++.++
T Consensus       219 ~~~~~~~------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (267)
T 3t9t_A          219 STGFRLY------------------KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  265 (267)
T ss_dssp             HTTCCCC------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             hcCCcCC------------------CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            1000000                  0111234588999999999999999999999999998763

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.82  E-value=1.1e-21  Score=133.58  Aligned_cols=127  Identities=23%  Similarity=0.368  Sum_probs=89.2

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++........ .......++..|+|||++.+..++.++||||+|++++++++ |..||.......  ....
T Consensus       155 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~  232 (291)
T 1xbb_A          155 YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAM  232 (291)
T ss_dssp             EEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHH
T ss_pred             cEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH--HHHH
Confidence            4799999999876433221 11222446788999999987788999999999999999999 999987643321  1111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhh
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR  148 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~  148 (161)
                      ........                  .+..++..+.+++.+||..||.+|||+.++++.|+++..+...
T Consensus       233 ~~~~~~~~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~  283 (291)
T 1xbb_A          233 LEKGERMG------------------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN  283 (291)
T ss_dssp             HHTTCCCC------------------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHH
T ss_pred             HHcCCCCC------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhh
Confidence            11110000                  0122344588999999999999999999999999999876543

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.82  E-value=2.8e-21  Score=131.40  Aligned_cols=136  Identities=18%  Similarity=0.155  Sum_probs=80.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++......  .......||+.|+|||++.+. .++.++||||+|++++++++|..||..............
T Consensus       138 ~~kl~Dfg~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~  215 (288)
T 1ob3_A          138 ELKIADFGLARAFGIPV--RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR  215 (288)
T ss_dssp             CEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CEEEeECccccccCccc--cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            58999999998764221  122345789999999998754 489999999999999999999999976443221111110


Q ss_pred             hhhc--CCCCccccc-----cccccchhhh-hhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           81 NDWL--PISTMEVVD-----VNLLSQEDIH-FVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        81 ~~~~--~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ....  .........     .......... .......+..+.+|+.+||+.||++|||++++++|-
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp  282 (288)
T 1ob3_A          216 ILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHA  282 (288)
T ss_dssp             HHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred             HHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence            0000  000000000     0000000000 000112345688999999999999999999998863

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.82  E-value=2.3e-21  Score=132.23  Aligned_cols=126  Identities=20%  Similarity=0.368  Sum_probs=85.5

Q ss_pred             ceeeecccccccccCCCC--ccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQ--SMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~--~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||+++.......  ........+|+.|++||++.+..++.++||||+|++++++++ +..||........ .. 
T Consensus       166 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~-~~-  243 (298)
T 3f66_A          166 TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-TV-  243 (298)
T ss_dssp             CEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTH-HH-
T ss_pred             CEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHH-HH-
Confidence            589999999987643211  112233567788999999988889999999999999999999 4555544322211 11 


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhh
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                      ..........                  +...+..+.+++.+||+.||.+|||+.++++.|+++.++..
T Consensus       244 ~~~~~~~~~~------------------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~  294 (298)
T 3f66_A          244 YLLQGRRLLQ------------------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  294 (298)
T ss_dssp             HHHTTCCCCC------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred             HHhcCCCCCC------------------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence            1111000000                  11123458899999999999999999999999999987543

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=2e-21  Score=134.69  Aligned_cols=127  Identities=28%  Similarity=0.436  Sum_probs=83.0

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++........ .......++..|+|||++.+..++.++||||+|++++++++ |..||.......  +...
T Consensus       185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--~~~~  262 (333)
T 1mqb_A          185 VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--VMKA  262 (333)
T ss_dssp             CEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHH
T ss_pred             cEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH--HHHH
Confidence            5899999999876432211 11223346778999999988889999999999999999998 999986543221  1111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhh
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR  148 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~  148 (161)
                      .......                  +....++..+.+++.+||+.||.+||++.+++++|+++......
T Consensus       263 ~~~~~~~------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~  313 (333)
T 1mqb_A          263 INDGFRL------------------PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS  313 (333)
T ss_dssp             HHTTCCC------------------CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred             HHCCCcC------------------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence            1110000                  00112334588999999999999999999999999999875544

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.82  E-value=2.5e-21  Score=134.34  Aligned_cols=109  Identities=20%  Similarity=0.207  Sum_probs=81.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCC-CCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~-~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++......   ......||+.|+|||++.+..+ +.++||||+|++++++++|..||........      
T Consensus       168 ~~kL~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~------  238 (335)
T 3dls_A          168 TIKLIDFGSAAYLERGK---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVE------  238 (335)
T ss_dssp             CEEECCCTTCEECCTTC---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTT------
T ss_pred             cEEEeecccceECCCCC---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHh------
Confidence            58999999998764322   2234679999999999887776 7789999999999999999999865221100      


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                               ....    .        +...+..+.+|+.+||+.||.+|||+.++++|-+
T Consensus       239 ---------~~~~----~--------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~  277 (335)
T 3dls_A          239 ---------AAIH----P--------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPW  277 (335)
T ss_dssp             ---------TCCC----C--------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTT
T ss_pred             ---------hccC----C--------CcccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence                     0000    0        0112345889999999999999999999999854

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.82  E-value=3.3e-21  Score=133.41  Aligned_cols=132  Identities=20%  Similarity=0.185  Sum_probs=85.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccc-hhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMT-LKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~-~~~~~   80 (161)
                      .+||+|||+++....     ......||+.|+|||++.+..++.++||||+|++++++++|..||......... .....
T Consensus       175 ~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~  249 (339)
T 1z57_A          175 DIKVVDFGSATYDDE-----HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI  249 (339)
T ss_dssp             CEEECCCSSCEETTS-----CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHH
T ss_pred             CceEeeCcccccCcc-----ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            479999999987432     123457899999999998888999999999999999999999999764432211 10000


Q ss_pred             hhhcCCC------Ccccc-----cccccc-----------chhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLPIS------TMEVV-----DVNLLS-----------QEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~~~------~~~~~-----~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ....+..      .....     ......           ............+..+.+|+.+||+.||.+|||+.++++|
T Consensus       250 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  329 (339)
T 1z57_A          250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH  329 (339)
T ss_dssp             HCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             hCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence            0000000      00000     000000           0000001123456779999999999999999999999987

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.82  E-value=7.8e-22  Score=138.13  Aligned_cols=122  Identities=20%  Similarity=0.198  Sum_probs=74.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCC-ccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSAN-GDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~-~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.....   .......||+.|+|||++.+..+..+ +||||+|++++++++|+.||.......... ...
T Consensus       156 ~~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~-~~~  231 (361)
T 3uc3_A          156 RLKICDFGYSKSSVLH---SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYR-KTI  231 (361)
T ss_dssp             CEEECCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHH-HHH
T ss_pred             eEEEeecCcccccccc---CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHH-HHH
Confidence            3899999999754221   12234679999999999887777655 899999999999999999997644322111 111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ........        ...      .....+..+.+|+.+||+.||.+|||+.++++|-+-
T Consensus       232 ~~~~~~~~--------~~~------~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f  278 (361)
T 3uc3_A          232 QRILSVKY--------SIP------DDIRISPECCHLISRIFVADPATRISIPEIKTHSWF  278 (361)
T ss_dssp             HHHHTTCC--------CCC------TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHH
T ss_pred             HHHhcCCC--------CCC------CcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcch
Confidence            11100000        000      001123458899999999999999999999998654

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.82  E-value=2e-21  Score=132.63  Aligned_cols=118  Identities=22%  Similarity=0.249  Sum_probs=81.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC---CCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR---VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~---~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||+++.+.....  ......||+.|+|||++.+..   ++.++||||+|++++++++|..||......  .+..
T Consensus       175 ~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~  250 (298)
T 2zv2_A          175 HIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM--CLHS  250 (298)
T ss_dssp             CEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHH
T ss_pred             CEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH--HHHH
Confidence            579999999987643221  234467999999999987654   367789999999999999999999653221  1111


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ...... ...                +.....+..+.+|+.+||+.||.+|||+.++++|-.
T Consensus       251 ~~~~~~-~~~----------------~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~  295 (298)
T 2zv2_A          251 KIKSQA-LEF----------------PDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPW  295 (298)
T ss_dssp             HHHHCC-CCC----------------CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHH
T ss_pred             HHhccc-CCC----------------CCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcc
Confidence            111000 000                001122345889999999999999999999988743

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.82  E-value=1e-21  Score=134.18  Aligned_cols=136  Identities=17%  Similarity=0.248  Sum_probs=87.1

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++........ .......||..|+|||++.+..++.++||||+|++++++++|..|+..........    
T Consensus       164 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----  239 (302)
T 4e5w_A          164 QVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKM----  239 (302)
T ss_dssp             EEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHH----
T ss_pred             CEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhc----
Confidence            4799999999886543221 22334568888999999988888999999999999999999998864321110000    


Q ss_pred             hhhcCCCCcccc-ccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           81 NDWLPISTMEVV-DVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        81 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                        ..+....... ..............+...+..+.+|+.+||+.||.+|||+.++++.|+++.
T Consensus       240 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          240 --IGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             --HCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             --cCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence              0000000000 000000000000111234456899999999999999999999999999875

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.82  E-value=1.9e-21  Score=131.64  Aligned_cols=120  Identities=22%  Similarity=0.255  Sum_probs=85.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.......   .....|++.|+|||++.+..++.++||||+|++++++++|..|+.....    ..   .
T Consensus       160 ~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----~~---~  229 (284)
T 2a19_B          160 QVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK----FF---T  229 (284)
T ss_dssp             EEEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH----HH---H
T ss_pred             CEEECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH----HH---H
Confidence            579999999987643222   2345689999999999888899999999999999999999888643211    00   0


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhh
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRN  149 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~  149 (161)
                      .......                  ....+..+.+++.+||..||.+|||+.+++++|+.+.......
T Consensus       230 ~~~~~~~------------------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~  279 (284)
T 2a19_B          230 DLRDGII------------------SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN  279 (284)
T ss_dssp             HHHTTCC------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-----
T ss_pred             Hhhcccc------------------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCcc
Confidence            0000000                  0112234788999999999999999999999999988765543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.82  E-value=2.6e-21  Score=140.79  Aligned_cols=118  Identities=17%  Similarity=0.204  Sum_probs=84.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.+....   ......||+.|+|||++. ..++.++||||+|++++++++|..||.......  +.....
T Consensus       187 ~~kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i~  260 (504)
T 3q5i_A          187 NIKIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD--IIKKVE  260 (504)
T ss_dssp             SEEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH
T ss_pred             cEEEEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHH
Confidence            58999999998764322   234467999999999986 468999999999999999999999997643321  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ...               ...........+..+.+|+.+||++||.+|||+.++++|-+
T Consensus       261 ~~~---------------~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~  304 (504)
T 3q5i_A          261 KGK---------------YYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRW  304 (504)
T ss_dssp             HCC---------------CCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred             cCC---------------CCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHh
Confidence            000               00001111233456899999999999999999999998854

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.82  E-value=4.9e-21  Score=134.38  Aligned_cols=130  Identities=24%  Similarity=0.221  Sum_probs=83.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.....     ....++|..|+|||++.+ ..++.++||||+|++++++++|+.||.+....... ....
T Consensus       166 ~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l-~~i~  239 (367)
T 1cm8_A          166 ELKILDFGLARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQL-KEIM  239 (367)
T ss_dssp             CEEECCCTTCEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHHH
T ss_pred             CEEEEeeecccccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHH
Confidence            5899999999875321     234578999999998876 56899999999999999999999999764432211 1100


Q ss_pred             hhhcCCCCcccccc-----------c--cccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           81 NDWLPISTMEVVDV-----------N--LLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        81 ~~~~~~~~~~~~~~-----------~--~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      .... .........           .  ........ ......+..+.+|+.+||..||.+|||+++++.|-
T Consensus       240 ~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp  309 (367)
T 1cm8_A          240 KVTG-TPPAEFVQRLQSDEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP  309 (367)
T ss_dssp             HHHC-CCCHHHHHTCSCHHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred             HhcC-CCCHHHHHHhhhHHHHHHHHhCCCCCCCCHH-HHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcCh
Confidence            0000 000000000           0  00000000 00123345689999999999999999999999973

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.82  E-value=2.7e-21  Score=144.46  Aligned_cols=124  Identities=21%  Similarity=0.371  Sum_probs=86.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++....... .......+++.|+|||++.+..++.++||||+|++++++++ |..||.+......  ....
T Consensus       529 ~vkL~DFG~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~--~~~i  605 (656)
T 2j0j_A          529 CVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV--IGRI  605 (656)
T ss_dssp             EEEECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--HHHH
T ss_pred             CEEEEecCCCeecCCCcc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHH--HHHH
Confidence            589999999987643221 12233457789999999988889999999999999999997 8899876433211  1111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      ......                  ..+..++..+.+|+.+||..||.+|||+.++++.|.++.++.
T Consensus       606 ~~~~~~------------------~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~  653 (656)
T 2j0j_A          606 ENGERL------------------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE  653 (656)
T ss_dssp             HHTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HcCCCC------------------CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence            111000                  001223455889999999999999999999999999998654

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.82  E-value=2.2e-21  Score=140.89  Aligned_cols=118  Identities=19%  Similarity=0.249  Sum_probs=83.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.+....   .....+||+.|+|||++. ..++.++||||+|++++++++|..||........  .....
T Consensus       177 ~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--~~~i~  250 (494)
T 3lij_A          177 LIKIVDFGLSAVFENQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI--LRKVE  250 (494)
T ss_dssp             CEEECCCTTCEECBTTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH
T ss_pred             cEEEEECCCCeECCCCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHH
Confidence            48999999998764321   234467999999999876 4689999999999999999999999976433211  11111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      .....               ...+.....+..+.+|+.+||+.||.+|||+.++++|-+
T Consensus       251 ~~~~~---------------~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~  294 (494)
T 3lij_A          251 KGKYT---------------FDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPW  294 (494)
T ss_dssp             HTCCC---------------CCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHH
T ss_pred             hCCCC---------------CCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcc
Confidence            10000               000001223455889999999999999999999998844

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.82  E-value=9.8e-22  Score=138.32  Aligned_cols=106  Identities=12%  Similarity=0.083  Sum_probs=76.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-----------CCCCCccchhhhHHHHHHHhcCCCCcccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-----------RVSANGDVYSFGIMLMETFTGKKPTDEIF   70 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-----------~~~~~~dv~s~g~il~e~~~g~~p~~~~~   70 (161)
                      .+||+|||+++....     ......| +.|+|||++.+.           .++.++||||+|++++++++|+.||....
T Consensus       244 ~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~  317 (377)
T 3byv_A          244 GVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDA  317 (377)
T ss_dssp             CEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC----
T ss_pred             CEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccc
Confidence            589999999986321     2334567 999999998877           79999999999999999999999986533


Q ss_pred             ccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           71 NEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .......             ...    .        ....+..+.+|+.+||+.||.+|||+.++++|
T Consensus       318 ~~~~~~~-------------~~~----~--------~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h  360 (377)
T 3byv_A          318 ALGGSEW-------------IFR----S--------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMET  360 (377)
T ss_dssp             --CCSGG-------------GGS----S--------CCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred             cccchhh-------------hhh----h--------ccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence            2211000             000    0        01223458899999999999999999999985

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.82  E-value=4.9e-21  Score=133.51  Aligned_cols=115  Identities=23%  Similarity=0.318  Sum_probs=81.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC---CCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~---~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||+++....      .....||+.|+|||++.   ...++.++||||+|++++++++|..||........ +..
T Consensus       192 ~~kL~DfG~a~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~-~~~  264 (348)
T 1u5q_A          192 LVKLGDFGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYH  264 (348)
T ss_dssp             EEEECCCTTCBSSSS------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHH
T ss_pred             CEEEeeccCceecCC------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHH
Confidence            589999999987532      23357999999999874   45689999999999999999999999865432211 111


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ......+..          .        ....+..+.+|+.+||+.||.+|||+.++++|..-
T Consensus       265 ~~~~~~~~~----------~--------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~  309 (348)
T 1u5q_A          265 IAQNESPAL----------Q--------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV  309 (348)
T ss_dssp             HHHSCCCCC----------C--------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHH
T ss_pred             HHhcCCCCC----------C--------CCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhh
Confidence            111000000          0        11223457899999999999999999999987654

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.82  E-value=2.7e-21  Score=138.79  Aligned_cols=116  Identities=21%  Similarity=0.244  Sum_probs=82.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....  .......+||+.|+|||++.+..++.++||||+|++++++++|..||........  .....
T Consensus       287 ~~kl~DFG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--~~~i~  362 (446)
T 4ejn_A          287 HIKITDFGLCKEGIKD--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL--FELIL  362 (446)
T ss_dssp             CEEECCCCCCCTTCC-------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH
T ss_pred             CEEEccCCCceeccCC--CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH--HHHHH
Confidence            5899999999864322  1223456899999999999888899999999999999999999999966433211  11100


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~l~  140 (161)
                      ... ..              .    +...+..+.+|+.+||+.||.+||     |++++++|-.
T Consensus       363 ~~~-~~--------------~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~  407 (446)
T 4ejn_A          363 MEE-IR--------------F----PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRF  407 (446)
T ss_dssp             HCC-CC--------------C----CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred             hCC-CC--------------C----CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCcc
Confidence            000 00              0    112234588999999999999999     9999998744

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.82  E-value=1.7e-21  Score=135.24  Aligned_cols=124  Identities=18%  Similarity=0.152  Sum_probs=65.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....    ......||+.|++||++.+..++.++||||+|++++++++|..||............ ..
T Consensus       169 ~~kl~Dfg~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-~~  243 (336)
T 3fhr_A          169 VLKLTDFGFAKETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGM-KR  243 (336)
T ss_dssp             CEEECCCTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------
T ss_pred             eEEEeccccceecccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhH-HH
Confidence            4899999999875321    223457899999999998888899999999999999999999999654332110000 00


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ...            ..............+..+.+|+.+||+.||.+|||+.++++|-.-.
T Consensus       244 ~~~------------~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~  292 (336)
T 3fhr_A          244 RIR------------LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWIN  292 (336)
T ss_dssp             -------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHH
T ss_pred             hhh------------ccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence            000            0000000001123345688999999999999999999999987643

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.81  E-value=1.1e-21  Score=133.33  Aligned_cols=126  Identities=22%  Similarity=0.384  Sum_probs=85.0

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++........ .......++..|+|||++.+..++.++||||+|++++++++ |..||........ ....
T Consensus       159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-~~~~  237 (291)
T 1u46_A          159 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI-LHKI  237 (291)
T ss_dssp             EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-HHHH
T ss_pred             CEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHH-HHHH
Confidence            4799999999876433221 12233457788999999987778999999999999999999 9999876433211 1110


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      .......                  ......+..+.+++.+||..||.+|||+.+++++|+++...-
T Consensus       238 ~~~~~~~------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  286 (291)
T 1u46_A          238 DKEGERL------------------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD  286 (291)
T ss_dssp             HTSCCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred             HccCCCC------------------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence            0000000                  001223455889999999999999999999999999887543

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.81  E-value=3.6e-21  Score=135.03  Aligned_cols=131  Identities=19%  Similarity=0.178  Sum_probs=74.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++....     ......||..|+|||++.+ ..++.++||||+|++++++++|+.||.+...... +....
T Consensus       170 ~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-l~~i~  243 (367)
T 2fst_X          170 ELKILDFGLARHTAD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ-LKLIL  243 (367)
T ss_dssp             CEEECC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHH
T ss_pred             CEEEeeccccccccc-----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH
Confidence            589999999987532     1234678999999999876 5689999999999999999999999976543221 11111


Q ss_pred             hhhcCCCCcccccc-----------ccc--cchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDV-----------NLL--SQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~-----------~~~--~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ..... ........           ...  ...... ......++.+.+|+.+||.+||.+|||+.+++.|-.
T Consensus       244 ~~~g~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~  314 (367)
T 2fst_X          244 RLVGT-PGAELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY  314 (367)
T ss_dssp             HHHCS-CCHHHHTTCCCHHHHHHHHTSCCCCCCCHH-HHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             HHhCC-CCHHHHHHhhhHHHHHHHhccCCCCCCCHH-HHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChh
Confidence            10000 00000000           000  000000 001123456899999999999999999999998843

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.81  E-value=2.6e-21  Score=130.90  Aligned_cols=125  Identities=25%  Similarity=0.388  Sum_probs=88.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++....... .......++..|+|||++.+..++.++||||+|++++++++ |..||.......  .....
T Consensus       147 ~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~  223 (279)
T 1qpc_A          147 SCKIADFGLARLIEDNEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE--VIQNL  223 (279)
T ss_dssp             CEEECCCTTCEECSSSCE-ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHH
T ss_pred             CEEECCCcccccccCccc-ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH--HHHHH
Confidence            589999999987643221 12233456788999999987788999999999999999999 899986543321  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                      ......                  ..+...+..+.+++.+||..||++|||+.++++.|+.+.....
T Consensus       224 ~~~~~~------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~  272 (279)
T 1qpc_A          224 ERGYRM------------------VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE  272 (279)
T ss_dssp             HTTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred             hcccCC------------------CCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence            110000                  0011233458899999999999999999999999999987643

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.81  E-value=2.8e-21  Score=137.49  Aligned_cols=112  Identities=13%  Similarity=0.093  Sum_probs=80.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCC----------CCCCCCCCccchhhhHHHHHHHhcCCCCccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYG----------REGRVSANGDVYSFGIMLMETFTGKKPTDEIFN   71 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~----------~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~   71 (161)
                      .+||+|||+++.....     ....+| +.|+|||++          ....++.++||||+|+++|++++|+.||.....
T Consensus       249 ~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~  322 (413)
T 3dzo_A          249 GVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAA  322 (413)
T ss_dssp             CEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGG
T ss_pred             eEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcch
Confidence            4899999999875321     334567 999999998          445588899999999999999999999965432


Q ss_pred             cccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH--HHHhHH
Q 043981           72 EEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK--LLKIRD  144 (161)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~--l~~~~~  144 (161)
                      .....             ..+.    .        ....+..+.+|+.+||+.||++|||+.++++|  ++.+.+
T Consensus       323 ~~~~~-------------~~~~----~--------~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~~~  372 (413)
T 3dzo_A          323 LGGSE-------------WIFR----S--------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRT  372 (413)
T ss_dssp             GSCSG-------------GGGS----S--------CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHH
T ss_pred             hhhHH-------------HHHh----h--------cccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHHHH
Confidence            21100             0000    0        00122458899999999999999999998776  444443

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.81  E-value=6.6e-21  Score=132.69  Aligned_cols=135  Identities=16%  Similarity=0.129  Sum_probs=85.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.....  ......||+.|+|||++.+. .++.++||||+|++++++++|..||.+...... +....
T Consensus       150 ~~kl~Dfg~a~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~-~~~i~  226 (346)
T 1ua2_A          150 VLKLADFGLAKSFGSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ-LTRIF  226 (346)
T ss_dssp             CEEECCCGGGSTTTSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHH
T ss_pred             CEEEEecccceeccCCcc--cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH-HHHHH
Confidence            589999999987643221  23446789999999998654 488899999999999999999999876433221 11111


Q ss_pred             hhh-c--CCCCcccc------ccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDW-L--PISTMEVV------DVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~-~--~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ... .  ........      .......... .......+..+.+|+.+||+.||.+|||+.|+++|-.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~  294 (346)
T 1ua2_A          227 ETLGTPTEEQWPDMCSLPDYVTFKSFPGIPL-HHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY  294 (346)
T ss_dssp             HHHCCCCTTTSSSTTSSTTCCCCCCCCCCCH-HHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred             HHcCCCChhhhhhhccCcccccccccCCCCh-HHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChh
Confidence            111 0  01111000      0000000000 0001233466899999999999999999999999854

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.81  E-value=4.3e-21  Score=137.24  Aligned_cols=65  Identities=22%  Similarity=0.312  Sum_probs=46.5

Q ss_pred             ceeeecccccccccCCCCc--------------------cccccccccccccCCCCC-CCCCCCCCccchhhhHHHHHHH
Q 043981            2 VAHLSDFSIAKLLTGEDQS--------------------MTQTQTLATIGYMAPEYG-REGRVSANGDVYSFGIMLMETF   60 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~--------------------~~~~~~~g~~~~~~Pe~~-~~~~~~~~~dv~s~g~il~e~~   60 (161)
                      .+||+|||+++........                    ......+||++|+|||++ ....++.++||||+||+++|++
T Consensus       167 ~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell  246 (432)
T 3n9x_A          167 SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL  246 (432)
T ss_dssp             CEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHH
T ss_pred             CEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHH
Confidence            5899999999876432211                    112456899999999985 4556999999999999999999


Q ss_pred             hcCCCC
Q 043981           61 TGKKPT   66 (161)
Q Consensus        61 ~g~~p~   66 (161)
                      +|..||
T Consensus       247 ~g~~p~  252 (432)
T 3n9x_A          247 NMLQSH  252 (432)
T ss_dssp             TTCTTT
T ss_pred             hccccc
Confidence            865444

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.81  E-value=1.3e-21  Score=143.33  Aligned_cols=124  Identities=27%  Similarity=0.400  Sum_probs=88.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+... .........++..|+|||++.+..++.++||||||+++||+++ |..||.......  +....
T Consensus       401 ~~kl~DFG~a~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~--~~~~i  477 (535)
T 2h8h_A          401 VCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQV  477 (535)
T ss_dssp             CEEECCTTSTTTCCCH-HHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH--HHHHH
T ss_pred             cEEEcccccceecCCC-ceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence            5899999999875321 1111223456788999999988889999999999999999999 899987643321  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      .....                  ......++..+.+||.+||+.||++|||+.++++.|+.+....
T Consensus       478 ~~~~~------------------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~  525 (535)
T 2h8h_A          478 ERGYR------------------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  525 (535)
T ss_dssp             HTTCC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred             HcCCC------------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence            11000                  0011233455889999999999999999999999999886543

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.81  E-value=5.1e-21  Score=131.28  Aligned_cols=132  Identities=19%  Similarity=0.246  Sum_probs=78.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.......  ......||..|+|||++.+ ..++.++||||+|++++++++|..||..............
T Consensus       140 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  217 (311)
T 4agu_A          140 VIKLCDFGFARLLTGPSD--YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRK  217 (311)
T ss_dssp             CEEECCCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CEEEeeCCCchhccCccc--ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            579999999987643222  2234578999999998875 4589999999999999999999999976543322111000


Q ss_pred             --hh--------hcCCCC---ccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 --ND--------WLPIST---MEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 --~~--------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                        ..        ......   ....+......  . .......+..+.+|+.+||+.||.+|||++++++|
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  285 (311)
T 4agu_A          218 TLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEP--L-ELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH  285 (311)
T ss_dssp             HHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCC--H-HHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred             HhcccccccccccccccccccCcCCCccccch--h-hhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence              00        000000   00000000000  0 00012344568899999999999999999999987

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.81  E-value=3.4e-21  Score=133.06  Aligned_cols=123  Identities=24%  Similarity=0.289  Sum_probs=65.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCC----CCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYG----REGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~----~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~   77 (161)
                      .+||+|||+++......   ......|+..|+|||++    .+..++.++||||+|++++++++|..||.........+.
T Consensus       164 ~~kl~Dfg~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~  240 (327)
T 3aln_A          164 NIKLCDFGISGQLVDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLT  240 (327)
T ss_dssp             EEEECCCSSSCC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------C
T ss_pred             CEEEccCCCceeccccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHH
Confidence            58999999998764221   22334689999999998    455689999999999999999999999975432111111


Q ss_pred             HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           78 HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      .....    ..     ......      .....+..+.+|+.+||..||.+|||+.++++|-.-.
T Consensus       241 ~~~~~----~~-----~~~~~~------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~  290 (327)
T 3aln_A          241 QVVKG----DP-----PQLSNS------EEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFIL  290 (327)
T ss_dssp             CCCCS----CC-----CCCCCC------SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred             HHhcC----CC-----CCCCCc------ccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHH
Confidence            00000    00     000000      0112234588999999999999999999999875544

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.81  E-value=5.1e-21  Score=135.14  Aligned_cols=137  Identities=15%  Similarity=0.206  Sum_probs=81.9

Q ss_pred             ceeeecccccccccCCCC-----ccccccccccccccCCCCCCC--CCCCCCccchhhhHHHHHHHhcCCCCcccccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQ-----SMTQTQTLATIGYMAPEYGRE--GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM   74 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~-----~~~~~~~~g~~~~~~Pe~~~~--~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~   74 (161)
                      .+||+|||.+........     ........||..|+|||++.+  ..++.++||||+|++++++++|+.||........
T Consensus       166 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  245 (389)
T 3gni_B          166 KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM  245 (389)
T ss_dssp             CEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH
T ss_pred             CEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence            579999999876432111     112233578999999999887  5689999999999999999999999976443322


Q ss_pred             chhHHhhhhcCCC-----Ccc-----------------ccc---cccccchhhhhhhhHHHHHHHHHHHHHhcccCcccC
Q 043981           75 TLKHWVNDWLPIS-----TME-----------------VVD---VNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQR  129 (161)
Q Consensus        75 ~~~~~~~~~~~~~-----~~~-----------------~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~R  129 (161)
                      .............     ...                 ...   .................+..+.+|+.+||++||.+|
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R  325 (389)
T 3gni_B          246 LLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDAR  325 (389)
T ss_dssp             HHHC--------------------------------------------------------CCHHHHHHHHHHTCSCTTTS
T ss_pred             HHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccC
Confidence            2111100000000     000                 000   000000000001123345678999999999999999


Q ss_pred             CCHHHHHHH
Q 043981          130 INAKEIVTK  138 (161)
Q Consensus       130 ps~~~vl~~  138 (161)
                      ||+.++++|
T Consensus       326 pta~ell~h  334 (389)
T 3gni_B          326 PSASTLLNH  334 (389)
T ss_dssp             CCHHHHTTS
T ss_pred             CCHHHHhcC
Confidence            999999987

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.81  E-value=4.6e-21  Score=131.21  Aligned_cols=118  Identities=16%  Similarity=0.167  Sum_probs=83.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++....    .......|++.|+|||++.+..++.++||||+|++++++++|..||.......  +.....
T Consensus       147 ~~kl~Dfg~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~i~  220 (304)
T 2jam_A          147 KIMITDFGLSKMEQN----GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK--LFEKIK  220 (304)
T ss_dssp             CEEBCSCSTTCCCCC----BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHH
T ss_pred             CEEEccCCcceecCC----CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHH
Confidence            479999999876422    12234568999999999988889999999999999999999999986543221  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ..... .              ........+..+.+|+.+||..||.+|||+.+++.|-.
T Consensus       221 ~~~~~-~--------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~  264 (304)
T 2jam_A          221 EGYYE-F--------------ESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPW  264 (304)
T ss_dssp             HCCCC-C--------------CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred             cCCCC-C--------------CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcc
Confidence            00000 0              00001223455889999999999999999999998754

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.81  E-value=1.7e-21  Score=136.07  Aligned_cols=115  Identities=17%  Similarity=0.202  Sum_probs=78.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....  .......+||+.|+|||++.+..++.++|+||+|+++++|++|..||........  .....
T Consensus       162 ~ikL~DFG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~--~~~i~  237 (353)
T 3txo_A          162 HCKLADFGMCKEGICN--GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL--FEAIL  237 (353)
T ss_dssp             CEEECCCTTCBCSCC-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH
T ss_pred             CEEEccccceeecccC--CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHH--HHHHH
Confidence            5899999999864321  1233456899999999999887899999999999999999999999976433211  11111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH------HHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA------KEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~------~~vl~~l  139 (161)
                      ....               ..    +...+..+.+|+.+||..||.+||++      +++++|-
T Consensus       238 ~~~~---------------~~----p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp  282 (353)
T 3txo_A          238 NDEV---------------VY----PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHP  282 (353)
T ss_dssp             HCCC---------------CC----CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSG
T ss_pred             cCCC---------------CC----CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCC
Confidence            0000               00    01123447899999999999999998      7788764

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.81  E-value=5.4e-21  Score=134.05  Aligned_cols=117  Identities=20%  Similarity=0.214  Sum_probs=80.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC------CCCCCCccchhhhHHHHHHHhcCCCCccccccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE------GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMT   75 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~------~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~   75 (161)
                      .+||+|||++..+....   ......||+.|+|||++.+      ..++.++||||+|++++++++|..||.......  
T Consensus       238 ~ikl~DfG~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~--  312 (365)
T 2y7j_A          238 QIRLSDFGFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL--  312 (365)
T ss_dssp             CEEECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--
T ss_pred             CEEEEecCcccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH--
Confidence            58999999998764322   2344679999999998752      358889999999999999999999996532211  


Q ss_pred             hhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           76 LKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .........               .....+.....+..+.+|+.+||+.||.+|||+.++++|
T Consensus       313 ~~~~i~~~~---------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  360 (365)
T 2y7j_A          313 MLRMIMEGQ---------------YQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH  360 (365)
T ss_dssp             HHHHHHHTC---------------CCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred             HHHHHHhCC---------------CCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            111000000               000000112234558899999999999999999999986

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.81  E-value=1.6e-20  Score=129.48  Aligned_cols=134  Identities=19%  Similarity=0.196  Sum_probs=85.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....   .......|+..|++||++.+..++.++||||+|++++++++|..||........ +.....
T Consensus       158 ~~kl~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~  233 (326)
T 1blx_A          158 QIKLADFGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ-LGKILD  233 (326)
T ss_dssp             CEEECSCCSCCCCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHH
T ss_pred             CEEEecCcccccccCC---CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHH
Confidence            4799999999875321   123446789999999999888899999999999999999999999976543221 111111


Q ss_pred             hhc-C--CCCccccc---cccc-cchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DWL-P--ISTMEVVD---VNLL-SQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~~-~--~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ... +  ........   .... .............+..+.+|+.+||..||.+|||+.+++.|-
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp  298 (326)
T 1blx_A          234 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP  298 (326)
T ss_dssp             HHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred             HcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence            000 0  00000000   0000 000000001123445688999999999999999999999763

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.81  E-value=9.8e-21  Score=130.19  Aligned_cols=125  Identities=20%  Similarity=0.246  Sum_probs=85.2

Q ss_pred             ceeeecccccccccCCCCc-------cccccccccccccCCCCCCCCC---CCCCccchhhhHHHHHHHhcCCCCccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQS-------MTQTQTLATIGYMAPEYGREGR---VSANGDVYSFGIMLMETFTGKKPTDEIFN   71 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-------~~~~~~~g~~~~~~Pe~~~~~~---~~~~~dv~s~g~il~e~~~g~~p~~~~~~   71 (161)
                      .+||+|||+++........       .......|++.|+|||++.+..   ++.++||||+|++++++++|..||.....
T Consensus       172 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~  251 (317)
T 2buj_A          172 QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQ  251 (317)
T ss_dssp             CEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHH
T ss_pred             CEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhc
Confidence            5799999998765311110       0112345799999999987654   68899999999999999999999865332


Q ss_pred             cccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           72 EEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                      ..............                  .+.....+..+.+++.+||+.||.+|||+.+++++|+++..
T Consensus       252 ~~~~~~~~~~~~~~------------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          252 KGDSVALAVQNQLS------------------IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP  306 (317)
T ss_dssp             TTSCHHHHHHCC--------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred             ccchhhHHhhccCC------------------CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence            22221111110000                  00011223458899999999999999999999999998764

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.81  E-value=5.5e-21  Score=129.45  Aligned_cols=118  Identities=17%  Similarity=0.222  Sum_probs=81.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......   ......|++.|++||++.+..++.++||||+|++++++++|..||........ +... .
T Consensus       150 ~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~-~  224 (283)
T 3bhy_A          150 RIKLIDFGIAHKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQET-LTNI-S  224 (283)
T ss_dssp             CEEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHH-H
T ss_pred             ceEEEecccceeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHH-HHHh-H
Confidence            58999999998764321   22345689999999999888899999999999999999999999866432211 1100 0


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ... .              ..........+..+.+|+.+||..||.+|||+.+++.|-
T Consensus       225 ~~~-~--------------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~  267 (283)
T 3bhy_A          225 AVN-Y--------------DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHS  267 (283)
T ss_dssp             TTC-C--------------CCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCH
T ss_pred             hcc-c--------------CCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCH
Confidence            000 0              000001122345688999999999999999999999874

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.81  E-value=1.1e-20  Score=127.80  Aligned_cols=116  Identities=17%  Similarity=0.200  Sum_probs=80.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||++......    ......|+..|+|||++.+..++.++||||+|++++++++|..||........  .....
T Consensus       147 ~~~l~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~  220 (279)
T 3fdn_A          147 ELKIADFGWSVHAPSS----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--YKRIS  220 (279)
T ss_dssp             CEEECSCCEESCC------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHHH
T ss_pred             CEEEEeccccccCCcc----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHH--HHHHH
Confidence            4799999998654321    22345789999999999888899999999999999999999999975332211  10000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      .... .                  .+...+..+.+|+.+||+.||.+|||+.++++|-.-.
T Consensus       221 ~~~~-~------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~  262 (279)
T 3fdn_A          221 RVEF-T------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT  262 (279)
T ss_dssp             HTCC-C------------------CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHH
T ss_pred             hCCC-C------------------CCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCcccc
Confidence            0000 0                  0111234578999999999999999999999986543

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.81  E-value=4.2e-21  Score=132.90  Aligned_cols=137  Identities=20%  Similarity=0.165  Sum_probs=81.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+.....  ......|+..|++||++.+. .++.++||||+|++++++++|+.||..............
T Consensus       162 ~~kl~Dfg~~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  239 (331)
T 4aaa_A          162 VVKLCDFGFARTLAAPGE--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMM  239 (331)
T ss_dssp             CEEECCCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             cEEEEeCCCceeecCCcc--ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Confidence            589999999987543211  22345789999999998765 588999999999999999999999976543221111000


Q ss_pred             hhhcC-----------CCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           81 NDWLP-----------ISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        81 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      .....           ................ ........+..+.+|+.+||+.||++|||+.++++|-.-
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f  310 (331)
T 4aaa_A          240 CLGNLIPRHQELFNKNPVFAGVRLPEIKEREP-LERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFF  310 (331)
T ss_dssp             HHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCC-HHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHH
T ss_pred             HhCCCChhhhhHhhhccccccccCccccccch-hhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchh
Confidence            00000           0000000000000000 000112345668999999999999999999999998543

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.81  E-value=6.4e-21  Score=128.84  Aligned_cols=118  Identities=19%  Similarity=0.178  Sum_probs=82.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||++..+....   ......||+.|+|||++.+ .++.++||||+|++++++++|..||...........  ..
T Consensus       147 ~~~l~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~--~~  220 (277)
T 3f3z_A          147 PLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLK--IR  220 (277)
T ss_dssp             CEEECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH--HH
T ss_pred             cEEEEecccceeccCcc---chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHH--HH
Confidence            47999999998764322   2334578999999998865 489999999999999999999999976433211110  00


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ....               ..........+..+.+|+.+||+.||.+|||+.++++|-.
T Consensus       221 ~~~~---------------~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~  264 (277)
T 3f3z_A          221 EGTF---------------TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEW  264 (277)
T ss_dssp             HCCC---------------CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred             hCCC---------------CCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHH
Confidence            0000               0000001123456889999999999999999999998754

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.81  E-value=3.5e-21  Score=132.25  Aligned_cols=125  Identities=23%  Similarity=0.345  Sum_probs=76.3

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+...... .......||+.|+|||++.+..++.++||||+|++++++++|+.||..............
T Consensus       154 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~  233 (311)
T 3ork_A          154 AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR  233 (311)
T ss_dssp             CEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc
Confidence            4799999999876432221 222345689999999999888899999999999999999999999976433221111000


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHH-HHHHhH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVT-KLLKIR  143 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~-~l~~~~  143 (161)
                      ...                 ..........+..+.+|+.+||+.||.+||++.+++. .|.++.
T Consensus       234 ~~~-----------------~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  280 (311)
T 3ork_A          234 EDP-----------------IPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  280 (311)
T ss_dssp             CCC-----------------CCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             CCC-----------------CCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence            000                 0000001223456889999999999999997655554 444443

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.81  E-value=3.8e-21  Score=133.87  Aligned_cols=114  Identities=25%  Similarity=0.291  Sum_probs=81.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......  ......+||+.|+|||++.+..++.++|+||+|++++++++|..||.......  +.....
T Consensus       156 ~vkL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~i~  231 (345)
T 1xjd_A          156 HIKIADFGMCKENMLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE--LFHSIR  231 (345)
T ss_dssp             CEEECCCTTCBCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH
T ss_pred             CEEEeEChhhhhcccCC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHH
Confidence            58999999998643211  12345689999999999998889999999999999999999999997643321  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHH-HHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK-EIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~-~vl~~  138 (161)
                      ...+. .                  +...+..+.+|+.+||..||.+||++. ++++|
T Consensus       232 ~~~~~-~------------------p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h  270 (345)
T 1xjd_A          232 MDNPF-Y------------------PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH  270 (345)
T ss_dssp             HCCCC-C------------------CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred             hCCCC-C------------------CcccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence            10000 0                  011234588999999999999999997 77665

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.81  E-value=7.5e-21  Score=131.30  Aligned_cols=115  Identities=21%  Similarity=0.273  Sum_probs=79.1

Q ss_pred             ceeeecccccccccCCCCc----------cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQS----------MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFN   71 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~----------~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~   71 (161)
                      .+||+|||+++........          .......||+.|+|||++.+..++.++||||+|++++++++|..|+.....
T Consensus       202 ~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~  281 (332)
T 3qd2_B          202 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR  281 (332)
T ss_dssp             CEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH
T ss_pred             CEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH
Confidence            5899999999886543211          122345799999999999888899999999999999999998766422110


Q ss_pred             cccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           72 EEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                          ......   ..              . .........+.+.+|+.+||+.||.+|||+.++++|
T Consensus       282 ----~~~~~~---~~--------------~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~  326 (332)
T 3qd2_B          282 ----IITDVR---NL--------------K-FPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIEN  326 (332)
T ss_dssp             ----HHHHHH---TT--------------C-CCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred             ----HHHHhh---cc--------------C-CCcccccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence                000000   00              0 000123344567899999999999999999999986

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.80  E-value=7.5e-21  Score=133.24  Aligned_cols=138  Identities=17%  Similarity=0.164  Sum_probs=84.7

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++........ .......||+.|+|||++.+ ..++.++||||+|++++++++|+.||.......... ..
T Consensus       166 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-~i  244 (364)
T 3qyz_A          166 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN-HI  244 (364)
T ss_dssp             CEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHH-HH
T ss_pred             CEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHH-HH
Confidence            5899999999876432211 12244579999999998654 458999999999999999999999997654332211 11


Q ss_pred             hhhhcCCCCccc---c-----c--cccccchhhh-hhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           80 VNDWLPISTMEV---V-----D--VNLLSQEDIH-FVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        80 ~~~~~~~~~~~~---~-----~--~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ............   .     .  .......... .......+..+.+|+.+||++||.+|||+.++++|-.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  316 (364)
T 3qyz_A          245 LGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY  316 (364)
T ss_dssp             HHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred             HHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence            100000000000   0     0  0000000000 0001223456899999999999999999999998754

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.80  E-value=6e-21  Score=129.59  Aligned_cols=115  Identities=23%  Similarity=0.297  Sum_probs=76.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.+....   ......|++.|+|||++. ..++.++||||+|++++++++|..||........  .....
T Consensus       165 ~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~--~~~~~  238 (285)
T 3is5_A          165 PIKIIDFGLAELFKSDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV--QQKAT  238 (285)
T ss_dssp             CEEECCCCCCCC-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH
T ss_pred             CEEEEeeecceecCCcc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH--Hhhhc
Confidence            48999999998754321   234467899999999875 4688999999999999999999999976432211  11111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...+...         ..       ....++.+.+|+.+||+.||.+|||+.++++|
T Consensus       239 ~~~~~~~---------~~-------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h  279 (285)
T 3is5_A          239 YKEPNYA---------VE-------CRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH  279 (285)
T ss_dssp             HCCCCCC---------C---------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred             cCCcccc---------cc-------cCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            0000000         00       00123457899999999999999999999876

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.80  E-value=6.7e-21  Score=133.81  Aligned_cols=132  Identities=17%  Similarity=0.101  Sum_probs=80.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++....     ......||+.|+|||++.+ ..++.++||||+|++++++++|+.||......... ....
T Consensus       182 ~~kL~Dfg~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~i~  255 (371)
T 4exu_A          182 ELKILDFGLARHADA-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQL-TQIL  255 (371)
T ss_dssp             CEEECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHH
T ss_pred             CEEEEecCccccccc-----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHH
Confidence            589999999986532     1234578999999998876 56899999999999999999999999764432211 1111


Q ss_pred             hhhcCCCCcccccc-----------ccc-cchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDV-----------NLL-SQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~-----------~~~-~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ...... .......           ... .............+..+.+|+.+||+.||++|||+.++++|-.
T Consensus       256 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  326 (371)
T 4exu_A          256 KVTGVP-GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF  326 (371)
T ss_dssp             HHHCCC-CHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred             HHhCCC-cHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcc
Confidence            000000 0000000           000 0000000001233566899999999999999999999998844

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.80  E-value=5.2e-21  Score=133.21  Aligned_cols=120  Identities=18%  Similarity=0.221  Sum_probs=81.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccccc----chh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM----TLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~----~~~   77 (161)
                      .+||+|||+++......  ......+||+.|+|||++.+..++.++|+||+|++++++++|..||........    ...
T Consensus       148 ~~kL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~  225 (345)
T 3a8x_A          148 HIKLTDYGMCKEGLRPG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTED  225 (345)
T ss_dssp             CEEECCGGGCBCSCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHH
T ss_pred             CEEEEeccccccccCCC--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHH
Confidence            58999999998643221  223456899999999999988899999999999999999999999965322110    000


Q ss_pred             HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH------HHHHHHH
Q 043981           78 HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA------KEIVTKL  139 (161)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~------~~vl~~l  139 (161)
                      ..........        .    .    .+...+..+.+|+.+||+.||.+||++      .+++.|-
T Consensus       226 ~~~~~i~~~~--------~----~----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp  277 (345)
T 3a8x_A          226 YLFQVILEKQ--------I----R----IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP  277 (345)
T ss_dssp             HHHHHHHHCC--------C----C----CCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSG
T ss_pred             HHHHHHHcCC--------C----C----CCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCC
Confidence            0000000000        0    0    011233458899999999999999996      6777764

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.80  E-value=9.9e-21  Score=130.78  Aligned_cols=140  Identities=21%  Similarity=0.323  Sum_probs=89.5

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++........ .......++..|+|||++.+..++.++||||+|++++++++|..|+...........   
T Consensus       183 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~---  259 (326)
T 2w1i_A          183 RVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI---  259 (326)
T ss_dssp             EEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHH---
T ss_pred             cEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhh---
Confidence            4799999999876433221 112234567789999999877889999999999999999999988754211100000   


Q ss_pred             hhhcCCCCcccccccc--ccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhh
Q 043981           81 NDWLPISTMEVVDVNL--LSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                         .............  ........+.+..++..+.+|+.+||+.||.+|||+.++++.|+++.+++.
T Consensus       260 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~  325 (326)
T 2w1i_A          260 ---GNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA  325 (326)
T ss_dssp             ---CTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             ---ccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence               0000000000000  000000000112344568899999999999999999999999999988754

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.80  E-value=2.1e-20  Score=126.40  Aligned_cols=116  Identities=18%  Similarity=0.264  Sum_probs=62.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.......  ......|++.|+|||++.+..++.++||||+|++++++++|..||........ +.    
T Consensus       150 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~----  222 (278)
T 3cok_A          150 NIKIADFGLATQLKMPHE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-LN----  222 (278)
T ss_dssp             CEEECCCTTCEECC------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------
T ss_pred             CEEEEeecceeeccCCCC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-HH----
Confidence            579999999987642211  12335689999999999888899999999999999999999999865332211 00    


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ...   ..   +..          .+...+..+.+|+.+||+.||.+|||+.++++|-.
T Consensus       223 ~~~---~~---~~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~  265 (278)
T 3cok_A          223 KVV---LA---DYE----------MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPF  265 (278)
T ss_dssp             -CC---SS---CCC----------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTT
T ss_pred             HHh---hc---ccC----------CccccCHHHHHHHHHHcccCHhhCCCHHHHhcCcc
Confidence            000   00   000          01122345889999999999999999999998743

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.80  E-value=2.4e-20  Score=128.06  Aligned_cols=119  Identities=27%  Similarity=0.349  Sum_probs=83.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......  .......|+..|++||++.+..++.++||||+|++++++++|..||...........  ..
T Consensus       163 ~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~--~~  238 (314)
T 3com_A          163 HAKLADFGVAGQLTDTM--AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFM--IP  238 (314)
T ss_dssp             CEEECCCTTCEECBTTB--SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH--HH
T ss_pred             CEEEeecccchhhhhhc--cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHH--Hh
Confidence            57999999998764321  123345789999999999888899999999999999999999999865432211110  00


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ...+...        .        .....+..+.+|+.+||..||.+|||+.++++|-.
T Consensus       239 ~~~~~~~--------~--------~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~  281 (314)
T 3com_A          239 TNPPPTF--------R--------KPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPF  281 (314)
T ss_dssp             HSCCCCC--------S--------SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHH
T ss_pred             cCCCccc--------C--------CcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHH
Confidence            0000000        0        01122345889999999999999999999998754

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.80  E-value=7.2e-21  Score=130.14  Aligned_cols=120  Identities=23%  Similarity=0.361  Sum_probs=85.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||++.......  .......|+..|++||++.+..++.++||||+|++++++++|..||........  .....
T Consensus       157 ~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~  232 (303)
T 3a7i_A          157 EVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV--LFLIP  232 (303)
T ss_dssp             CEEECCCTTCEECBTTB--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHHH
T ss_pred             CEEEeecccceecCccc--cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHH--HHHhh
Confidence            47999999998764321  123446789999999999888899999999999999999999999865432211  11111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                      ...+...                  ....+..+.+|+.+||..||.+|||+.++++|..-..
T Consensus       233 ~~~~~~~------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~  276 (303)
T 3a7i_A          233 KNNPPTL------------------EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR  276 (303)
T ss_dssp             HSCCCCC------------------CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHH
T ss_pred             cCCCCCC------------------ccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhc
Confidence            1100000                  1122344889999999999999999999999876443

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.80  E-value=1.1e-20  Score=131.66  Aligned_cols=139  Identities=21%  Similarity=0.148  Sum_probs=83.3

Q ss_pred             ceeeecccccccccCCCCcc--------ccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCcccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSM--------TQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNE   72 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~--------~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~   72 (161)
                      .+||+|||+++.........        ......||..|+|||++.. ..++.++||||+|++++++++|..||......
T Consensus       150 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  229 (353)
T 2b9h_A          150 DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR  229 (353)
T ss_dssp             CEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             cEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH
Confidence            58999999998764321110        1223578999999998654 56899999999999999999999999765432


Q ss_pred             ccchhHHhhhhcCCCC--cccccc--------ccc-cchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           73 EMTLKHWVNDWLPIST--MEVVDV--------NLL-SQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        73 ~~~~~~~~~~~~~~~~--~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ............+...  ......        ... .............+..+.+|+.+||+.||.+|||+.++++|-.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  308 (353)
T 2b9h_A          230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY  308 (353)
T ss_dssp             HHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             HHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcc
Confidence            2211111000001000  000000        000 0000000011234566889999999999999999999998744

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.80  E-value=1.3e-20  Score=131.55  Aligned_cols=115  Identities=18%  Similarity=0.267  Sum_probs=82.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      ++||+|||+++.....  .......+||+.|+|||++.+..++.++|+||+|+++++|++|..||.......  +.....
T Consensus       159 ~vkL~DFG~a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~--~~~~i~  234 (353)
T 2i0e_A          159 HIKIADFGMCKENIWD--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE--LFQSIM  234 (353)
T ss_dssp             CEEECCCTTCBCCCCT--TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH
T ss_pred             cEEEEeCCcccccccC--CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHH--HHHHHH
Confidence            5899999999864321  122345689999999999988889999999999999999999999997643221  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCC-----HHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRIN-----AKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~vl~~l  139 (161)
                      .... .              .    +...+..+.+|+.+||..||.+||+     +++++.|-
T Consensus       235 ~~~~-~--------------~----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~  278 (353)
T 2i0e_A          235 EHNV-A--------------Y----PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA  278 (353)
T ss_dssp             HCCC-C--------------C----CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSG
T ss_pred             hCCC-C--------------C----CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCc
Confidence            0000 0              0    1122345889999999999999995     57888773

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.80  E-value=2.9e-21  Score=137.17  Aligned_cols=121  Identities=20%  Similarity=0.227  Sum_probs=83.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC----CCCCccchhhhHHHHHHHhcCCCCccccccccchh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR----VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~----~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~   77 (161)
                      ++||+|||+++.+.... .......+||+.|+|||++.+..    ++.++|+||+|+++++|++|..||........ +.
T Consensus       206 ~ikL~DFG~a~~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~-~~  283 (410)
T 3v8s_A          206 HLKLADFGTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT-YS  283 (410)
T ss_dssp             CEEECCCTTCEECCTTS-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HH
T ss_pred             CEEEeccceeEeeccCC-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhH-HH
Confidence            58999999998764321 12234578999999999987654    78899999999999999999999976433211 11


Q ss_pred             HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCccc--CCCHHHHHHHHH
Q 043981           78 HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQ--RINAKEIVTKLL  140 (161)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~--Rps~~~vl~~l~  140 (161)
                      ........                ...+.....+..+.+|+.+||..+|.+  |++++++++|-.
T Consensus       284 ~i~~~~~~----------------~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~  332 (410)
T 3v8s_A          284 KIMNHKNS----------------LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF  332 (410)
T ss_dssp             HHHTHHHH----------------CCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGG
T ss_pred             HHHhcccc----------------ccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCcc
Confidence            10000000                000001122345889999999999988  999999999854

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.80  E-value=1.7e-21  Score=133.90  Aligned_cols=137  Identities=14%  Similarity=0.142  Sum_probs=78.7

Q ss_pred             ceeeecccccccccCCCCc-----cccccccccccccCCCCCCC-----CCCCCCccchhhhHHHHHHHhcCCCCccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQS-----MTQTQTLATIGYMAPEYGRE-----GRVSANGDVYSFGIMLMETFTGKKPTDEIFN   71 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-----~~~~~~~g~~~~~~Pe~~~~-----~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~   71 (161)
                      .+||+|||+++........     .......||+.|+|||++..     ..++.++||||+|++++++++|..||.....
T Consensus       152 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~  231 (316)
T 2ac3_A          152 PVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCG  231 (316)
T ss_dssp             SEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCC
T ss_pred             ceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccc
Confidence            3899999999865322111     11223569999999998864     3478999999999999999999999976543


Q ss_pred             cccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           72 EEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ....+......  +.................+.......+..+.+|+.+||+.||.+|||+.++++|-.
T Consensus       232 ~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~  298 (316)
T 2ac3_A          232 SDCGWDRGEAC--PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPW  298 (316)
T ss_dssp             SCSCC----CC--HHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTT
T ss_pred             ccccccccccc--hhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChh
Confidence            22111000000  00000000000000000000001223456899999999999999999999998744

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.80  E-value=2e-20  Score=128.98  Aligned_cols=112  Identities=19%  Similarity=0.234  Sum_probs=81.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++....     .....+||+.|+|||++.+..++.++|+||+|++++++++|..||........ +.. ..
T Consensus       144 ~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~-i~  216 (318)
T 1fot_A          144 HIKITDFGFAKYVPD-----VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT-YEK-IL  216 (318)
T ss_dssp             CEEECCCSSCEECSS-----CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHH-HH
T ss_pred             CEEEeecCcceecCC-----ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH-HHH-HH
Confidence            589999999987532     12346799999999999888899999999999999999999999965432111 110 00


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~l  139 (161)
                      ... ..              .    +...+..+.+++.+||..||.+||     ++++++.|-
T Consensus       217 ~~~-~~--------------~----p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp  260 (318)
T 1fot_A          217 NAE-LR--------------F----PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHP  260 (318)
T ss_dssp             HCC-CC--------------C----CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSG
T ss_pred             hCC-CC--------------C----CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCc
Confidence            000 00              0    112234588999999999999999     899998874

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.80  E-value=1.2e-20  Score=141.25  Aligned_cols=114  Identities=18%  Similarity=0.278  Sum_probs=82.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      ++||+|||+++......  ......+||+.|+|||++.+..|+.++|+||+|+++|||++|..||........  .....
T Consensus       480 ~ikL~DFGla~~~~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~--~~~i~  555 (674)
T 3pfq_A          480 HIKIADFGMCKENIWDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL--FQSIM  555 (674)
T ss_dssp             CEEECCCTTCEECCCTT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHH
T ss_pred             cEEEeecceeeccccCC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH--HHHHH
Confidence            58999999998643221  224457899999999999988999999999999999999999999976433211  11111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH-----HHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA-----KEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~-----~~vl~~  138 (161)
                      .   ...            .+    +...+.++.+|+.+||+.||.+|+++     +++++|
T Consensus       556 ~---~~~------------~~----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h  598 (674)
T 3pfq_A          556 E---HNV------------AY----PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH  598 (674)
T ss_dssp             S---SCC------------CC----CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred             h---CCC------------CC----CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence            0   000            00    11233458899999999999999997     777766

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.80  E-value=3.5e-20  Score=129.88  Aligned_cols=119  Identities=10%  Similarity=-0.029  Sum_probs=86.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.+............+||+.|+|||++.+..++.++||||+|++++++++|+.||...........    
T Consensus       221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~----  296 (365)
T 3e7e_A          221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPE----  296 (365)
T ss_dssp             TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEEC----
T ss_pred             CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCceeec----
Confidence            5899999999875432333334556799999999999988899999999999999999999999865332211100    


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-CHHHHHHHHHHhHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-NAKEIVTKLLKIRDS  145 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-s~~~vl~~l~~~~~~  145 (161)
                              ..+     ...        .....+.+++..||+.+|.+|+ +++++.+.|+.+...
T Consensus       297 --------~~~-----~~~--------~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~  340 (365)
T 3e7e_A          297 --------GLF-----RRL--------PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ  340 (365)
T ss_dssp             --------SCC-----TTC--------SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             --------hhc-----ccc--------CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence                    000     000        0123467899999999999995 688888888887765

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.80  E-value=2.5e-20  Score=125.34  Aligned_cols=117  Identities=23%  Similarity=0.289  Sum_probs=81.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCC---CccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSA---NGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~---~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||++....       .....||+.|+|||++.+..+..   ++||||+|++++++++|+.||............
T Consensus       151 ~~~l~~~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~  223 (271)
T 3kmu_A          151 TARISMADVKFSFQ-------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKV  223 (271)
T ss_dssp             CEEEEGGGSCCTTS-------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHH
T ss_pred             ceeEEeccceeeec-------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHH
Confidence            46788777764421       22356899999999987765544   699999999999999999999764332211110


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                       ........                  .+...+..+.+++.+||+.||.+|||++++++.|.++.+
T Consensus       224 -~~~~~~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          224 -ALEGLRPT------------------IPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             -HHSCCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             -HhcCCCCC------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence             00000000                  012233458899999999999999999999999998754

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.80  E-value=2.7e-20  Score=126.25  Aligned_cols=114  Identities=16%  Similarity=0.197  Sum_probs=82.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||++......    ......|+..|++||++.+..++.++|+||+|++++++++|..||........  .....
T Consensus       152 ~~kl~Dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~  225 (284)
T 2vgo_A          152 ELKIADFGWSVHAPSL----RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET--HRRIV  225 (284)
T ss_dssp             CEEECCCTTCEECSSS----CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHHH
T ss_pred             CEEEecccccccCccc----ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH--HHHHh
Confidence            4799999998765321    22345789999999999888899999999999999999999999965432211  00000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      .   ...      ..          +...+..+.+++.+||+.||.+|||+.++++|-.
T Consensus       226 ~---~~~------~~----------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~  265 (284)
T 2vgo_A          226 N---VDL------KF----------PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPW  265 (284)
T ss_dssp             T---TCC------CC----------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHH
T ss_pred             c---ccc------CC----------CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHH
Confidence            0   000      00          1122345789999999999999999999998754

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.79  E-value=1.6e-20  Score=135.58  Aligned_cols=115  Identities=19%  Similarity=0.246  Sum_probs=82.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCC-CCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~-~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++......   .....+||+.|+|||++.+..+ +.++||||+|++++++++|..||.......  +....
T Consensus       154 ~vkL~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~--~~~~i  228 (476)
T 2y94_A          154 NAKIADFGLSNMMSDGE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT--LFKKI  228 (476)
T ss_dssp             CEEECCCSSCEECCTTC---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH--HHHHH
T ss_pred             CeEEEeccchhhccccc---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH--HHHHH
Confidence            58999999998764321   2344679999999999987765 678999999999999999999997533211  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ....   .        ..        +...+..+.+|+.+||..||.+|||+.++++|-+
T Consensus       229 ~~~~---~--------~~--------p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~  269 (476)
T 2y94_A          229 CDGI---F--------YT--------PQYLNPSVISLLKHMLQVDPMKRATIKDIREHEW  269 (476)
T ss_dssp             HTTC---C--------CC--------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHH
T ss_pred             hcCC---c--------CC--------CccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHH
Confidence            1000   0        00        0112345889999999999999999999999754

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.79  E-value=9.7e-21  Score=128.91  Aligned_cols=119  Identities=24%  Similarity=0.317  Sum_probs=80.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC--CCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR--VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~--~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++......  .......|+..|+|||++.+..  ++.++||||+|++++++++|..||.............
T Consensus       161 ~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  238 (295)
T 2clq_A          161 VLKISDFGTSKRLAGIN--PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV  238 (295)
T ss_dssp             CEEECCTTTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHH
T ss_pred             CEEEeecccccccCCCC--CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhh
Confidence            57999999998764321  1223457899999999986543  7889999999999999999999996543322111111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ........                  .+...+..+.+|+.+||+.||++|||+.+++.|-.
T Consensus       239 ~~~~~~~~------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~  281 (295)
T 2clq_A          239 GMFKVHPE------------------IPESMSAEAKAFILKCFEPDPDKRACANDLLVDEF  281 (295)
T ss_dssp             HHHCCCCC------------------CCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGG
T ss_pred             cccccccc------------------ccccCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence            00000000                  01123345889999999999999999999988643

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.79  E-value=4.6e-20  Score=126.88  Aligned_cols=128  Identities=15%  Similarity=0.136  Sum_probs=81.3

Q ss_pred             ceeeecccccccccCCC---CccccccccccccccCCCCCCC---------CCCCCCccchhhhHHHHHHHhcCCCCccc
Q 043981            2 VAHLSDFSIAKLLTGED---QSMTQTQTLATIGYMAPEYGRE---------GRVSANGDVYSFGIMLMETFTGKKPTDEI   69 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~---~~~~~~~~~g~~~~~~Pe~~~~---------~~~~~~~dv~s~g~il~e~~~g~~p~~~~   69 (161)
                      .+||+|||+++......   .........|+..|+|||++.+         ..++.++||||+|++++++++|..||...
T Consensus       167 ~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  246 (319)
T 2y4i_B          167 KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ  246 (319)
T ss_dssp             CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC
T ss_pred             CEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence            47999999987653211   1122233568999999998764         34788899999999999999999999764


Q ss_pred             cccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhh
Q 043981           70 FNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR  148 (161)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~  148 (161)
                      ..+.....  .........   .              ....+..+.+++.+||..||.+|||+.++++.|+.+......
T Consensus       247 ~~~~~~~~--~~~~~~~~~---~--------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~  306 (319)
T 2y4i_B          247 PAEAIIWQ--MGTGMKPNL---S--------------QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR  306 (319)
T ss_dssp             CHHHHHHH--HHTTCCCCC---C--------------CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred             CHHHHHHH--hccCCCCCC---C--------------cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence            33221111  110000000   0              001123378999999999999999999999999999876544

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.79  E-value=3.8e-21  Score=130.01  Aligned_cols=120  Identities=18%  Similarity=0.192  Sum_probs=83.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....  ........|+..|+|||++.+..++.++||||+|++++++++|..||.......  +.....
T Consensus       154 ~~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~i~  229 (279)
T 2w5a_A          154 NVKLGDFGLARILNHD--TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE--LAGKIR  229 (279)
T ss_dssp             CEEECCCCHHHHC-----CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH
T ss_pred             CEEEecCchheeeccc--cccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH--HHHHHh
Confidence            4899999999876422  112234568999999999988889999999999999999999999987643211  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                      ......                  .+...+..+.+++.+||+.||.+|||+.+++++++...
T Consensus       230 ~~~~~~------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~  273 (279)
T 2w5a_A          230 EGKFRR------------------IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE  273 (279)
T ss_dssp             HTCCCC------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred             hccccc------------------CCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence            110000                  01123345889999999999999999999999876543

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.79  E-value=2.4e-20  Score=128.99  Aligned_cols=116  Identities=18%  Similarity=0.202  Sum_probs=78.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......  .......||+.|+|||++.+..++.++||||+|++++++++|..||........ +. ...
T Consensus       159 ~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~-~i~  234 (327)
T 3a62_A          159 HVKLTDFGLCKESIHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT-ID-KIL  234 (327)
T ss_dssp             CEEECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HH-HHH
T ss_pred             cEEEEeCCcccccccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH-HH-HHH
Confidence            58999999997643221  123446799999999999888899999999999999999999999976432211 11 011


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~l~  140 (161)
                      .... .                  .+...+..+.+|+.+||..||.+||     ++.++++|-.
T Consensus       235 ~~~~-~------------------~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~  279 (327)
T 3a62_A          235 KCKL-N------------------LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPF  279 (327)
T ss_dssp             HTCC-C------------------CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGG
T ss_pred             hCCC-C------------------CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCc
Confidence            0000 0                  0112234588999999999999999     7888888744

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.79  E-value=3.3e-20  Score=127.90  Aligned_cols=118  Identities=18%  Similarity=0.200  Sum_probs=81.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC---CCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~---~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||+++....   ........|+..|+|||++.   ...++.++||||+|++++++++|..||........... 
T Consensus       155 ~~kl~Dfg~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-  230 (322)
T 2ycf_A          155 LIKITDFGHSKILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKD-  230 (322)
T ss_dssp             CEEECCCTTCEECCC---CHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHH-
T ss_pred             eEEEccCccceeccc---ccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHH-
Confidence            489999999987632   11223456899999999863   45688999999999999999999999975433221111 


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ........               .........+..+.+|+.+||..||.+|||+.++++|
T Consensus       231 ~~~~~~~~---------------~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h  275 (322)
T 2ycf_A          231 QITSGKYN---------------FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH  275 (322)
T ss_dssp             HHHHTCCC---------------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHhCccc---------------cCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence            11100000               0000012234568899999999999999999999976

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.79  E-value=7.9e-21  Score=132.86  Aligned_cols=138  Identities=18%  Similarity=0.239  Sum_probs=84.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....    ......||+.|+|||++.+..++.++||||+|++++++++|..||...............
T Consensus       170 ~~kl~Dfg~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~  245 (360)
T 3eqc_A          170 EIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQ  245 (360)
T ss_dssp             CEEECCCCCCHHHHHH----C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--
T ss_pred             CEEEEECCCCcccccc----cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccc
Confidence            5799999999765321    223457899999999998888999999999999999999999999764432211110000


Q ss_pred             h--hcCC------CCcccc---cccccc------------chhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 D--WLPI------STMEVV---DVNLLS------------QEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~--~~~~------~~~~~~---~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .  ....      ......   ......            ............+..+.+|+.+||+.||.+|||++++++|
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h  325 (360)
T 3eqc_A          246 VEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  325 (360)
T ss_dssp             ----------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             ccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence            0  0000      000000   000000            0000000011234568999999999999999999999998


Q ss_pred             HHHhH
Q 043981          139 LLKIR  143 (161)
Q Consensus       139 l~~~~  143 (161)
                      -.--.
T Consensus       326 p~~~~  330 (360)
T 3eqc_A          326 AFIKR  330 (360)
T ss_dssp             HHHHH
T ss_pred             hHhhc
Confidence            66433

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.79  E-value=2.5e-20  Score=126.60  Aligned_cols=119  Identities=20%  Similarity=0.230  Sum_probs=79.4

Q ss_pred             eeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      +||+|||+++....      .....|+..|+|||++.+ ..++.++||||+|++++++++|..|+............ ..
T Consensus       160 ~kl~Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~-~~  232 (289)
T 4fvq_A          160 IKLSDPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQF-YE  232 (289)
T ss_dssp             EEECCCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH-HH
T ss_pred             eeeccCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHH-hh
Confidence            89999999875421      233457889999999876 56899999999999999999965443322221111110 00


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhh
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR  148 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~  148 (161)
                      ...  ...                  ...+..+.+|+.+||+.||.+|||+.+++++|+++.+....
T Consensus       233 ~~~--~~~------------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~  279 (289)
T 4fvq_A          233 DRH--QLP------------------APKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV  279 (289)
T ss_dssp             TTC--CCC------------------CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred             ccC--CCC------------------CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence            000  000                  00122377899999999999999999999999999874433

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.79  E-value=5e-20  Score=128.15  Aligned_cols=131  Identities=15%  Similarity=0.215  Sum_probs=83.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCC-CccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSA-NGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~-~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++.....    ......|+..|+|||++.+. .++. ++||||+|++++++++|..||.............
T Consensus       190 ~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i  265 (348)
T 2pml_X          190 RVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNI  265 (348)
T ss_dssp             CEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHH
T ss_pred             cEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Confidence            5799999999875322    23446789999999999877 5666 8999999999999999999997654422211111


Q ss_pred             hhhhc--CCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           80 VNDWL--PISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        80 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      .....  +......... . .. ..........+..+.+|+.+||+.||.+|||+.++++|-
T Consensus       266 ~~~~~~~~~~~~~~~~~-~-~~-~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp  324 (348)
T 2pml_X          266 RTKNIEYPLDRNHFLYP-L-TN-KKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHE  324 (348)
T ss_dssp             TSCCCCCCCSSSSSTTT-T-CC---------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred             hccCcCCccchhhhhcc-c-cc-cccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence            11100  0000000000 0 00 000001123445689999999999999999999999863

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.79  E-value=1.6e-20  Score=131.29  Aligned_cols=135  Identities=17%  Similarity=0.143  Sum_probs=76.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.....   .......||+.|+|||++.+ ..++.++||||+|++++++++|+.||........ +....
T Consensus       172 ~~kl~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~i~  247 (362)
T 3pg1_A          172 DITICDFNLAREDTAD---ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQ-LNKIV  247 (362)
T ss_dssp             CEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHH
T ss_pred             CEEEEecCcccccccc---cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHH
Confidence            4799999999864322   12334678999999998876 5689999999999999999999999976443211 11110


Q ss_pred             hhhcCCCCccc-----------cccccc-cchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEV-----------VDVNLL-SQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~-----------~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ...........           ...... .............+..+.+|+.+||+.||.+|||+.++++|-.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  319 (362)
T 3pg1_A          248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPY  319 (362)
T ss_dssp             HHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             HHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCch
Confidence            00000000000           000000 0000000011233456889999999999999999999998743

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.79  E-value=1.8e-20  Score=127.34  Aligned_cols=117  Identities=18%  Similarity=0.188  Sum_probs=81.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......   ......|+..|++||++.+ .++.++||||+|++++++++|..||.......  ......
T Consensus       162 ~~kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~  235 (287)
T 2wei_A          162 DIKIIDFGLSTCFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD--ILKRVE  235 (287)
T ss_dssp             CEEECSTTGGGTBCCCS---SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH
T ss_pred             cEEEeccCcceeecCCC---ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH--HHHHHH
Confidence            58999999998764322   1233568899999998865 48899999999999999999999987643221  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      .....               ...+.....+..+.+++.+||..||.+|||+.++++|-
T Consensus       236 ~~~~~---------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp  278 (287)
T 2wei_A          236 TGKYA---------------FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHP  278 (287)
T ss_dssp             HCCCC---------------CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSH
T ss_pred             cCCCC---------------CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCH
Confidence            00000               00000122345588999999999999999999999874

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.79  E-value=2.3e-20  Score=130.24  Aligned_cols=113  Identities=16%  Similarity=0.119  Sum_probs=82.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....     ....+||+.|+|||++.+..++.++|+||+|++++++++|..||.......  ......
T Consensus       179 ~~kL~DFg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~i~  251 (350)
T 1rdq_E          179 YIQVTDFGFAKRVKGR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYEKIV  251 (350)
T ss_dssp             CEEECCCTTCEECSSC-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH
T ss_pred             CEEEcccccceeccCC-----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH--HHHHHH
Confidence            5899999999876321     234679999999999988889999999999999999999999997543221  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCC-----HHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRIN-----AKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~vl~~l~  140 (161)
                      ... ...                  +...+..+.+|+.+||+.||.+||+     +++++.|-.
T Consensus       252 ~~~-~~~------------------p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~  296 (350)
T 1rdq_E          252 SGK-VRF------------------PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW  296 (350)
T ss_dssp             HCC-CCC------------------CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred             cCC-CCC------------------CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcC
Confidence            000 000                  1122345889999999999999998     899988754

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.79  E-value=3.7e-20  Score=130.15  Aligned_cols=114  Identities=23%  Similarity=0.242  Sum_probs=80.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      ++||+|||+++......  ......+||+.|+|||++.+..++.++|+||+|+++++|++|..||........  .....
T Consensus       177 ~ikL~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~--~~~i~  252 (373)
T 2r5t_A          177 HIVLTDFGLCKENIEHN--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM--YDNIL  252 (373)
T ss_dssp             CEEECCCCBCGGGBCCC--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHH--HHHHH
T ss_pred             CEEEeeCccccccccCC--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH--HHHHH
Confidence            58999999998643221  223457899999999999988899999999999999999999999976433211  11111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHH----HHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK----EIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~----~vl~~  138 (161)
                      .. +...                  +...+..+.+|+.+||+.||.+||++.    +++.|
T Consensus       253 ~~-~~~~------------------~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h  294 (373)
T 2r5t_A          253 NK-PLQL------------------KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSH  294 (373)
T ss_dssp             HS-CCCC------------------CSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTS
T ss_pred             hc-ccCC------------------CCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCC
Confidence            00 0000                  011234588999999999999999974    55554

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.79  E-value=3.6e-20  Score=135.99  Aligned_cols=116  Identities=22%  Similarity=0.359  Sum_probs=83.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCcccccccc--chhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM--TLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~--~~~~~   79 (161)
                      ++||+|||+++.+....   .....+||+.|+|||++.+..++.++|+||+|+++++|++|..||........  .+...
T Consensus       324 ~vKL~DFGla~~~~~~~---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~  400 (576)
T 2acx_A          324 HIRISDLGLAVHVPEGQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL  400 (576)
T ss_dssp             CEEECCCTTCEECCTTC---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHH
T ss_pred             CeEEEecccceecccCc---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHH
Confidence            58999999998764322   22345899999999999888899999999999999999999999976433211  11111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTKL  139 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~l  139 (161)
                      .... +...                  +...+..+.+|+.+||..||.+||     +++++++|-
T Consensus       401 i~~~-~~~~------------------p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~Hp  446 (576)
T 2acx_A          401 VKEV-PEEY------------------SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHP  446 (576)
T ss_dssp             HHHC-CCCC------------------CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSG
T ss_pred             hhcc-cccC------------------CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhCh
Confidence            1111 0000                  112234588999999999999999     789998873

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.79  E-value=4.9e-20  Score=126.63  Aligned_cols=119  Identities=20%  Similarity=0.274  Sum_probs=74.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC-----CCCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR-----EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~-----~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||+++......   ......|++.|++||++.     ...++.++||||+|++++++++|..||.........+
T Consensus       163 ~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  239 (318)
T 2dyl_A          163 QIKLCDFGISGRLVDDK---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVL  239 (318)
T ss_dssp             CEEECCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH
T ss_pred             CEEEEECCCchhccCCc---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHH
Confidence            58999999997754321   223456899999999984     3458889999999999999999999997643322222


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ........+ ...        .        ....+..+.+|+.+||+.||.+|||+.++++|-.
T Consensus       240 ~~~~~~~~~-~~~--------~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~  286 (318)
T 2dyl_A          240 TKVLQEEPP-LLP--------G--------HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSF  286 (318)
T ss_dssp             HHHHHSCCC-CCC--------S--------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHH
T ss_pred             HHHhccCCC-CCC--------c--------cCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHH
Confidence            211111110 000        0        0112345889999999999999999999998754

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.78  E-value=1.8e-20  Score=130.93  Aligned_cols=120  Identities=23%  Similarity=0.341  Sum_probs=82.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC--CCCCCccchhhhHHHHHHHhcCCCCcccccccc--chh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG--RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM--TLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~--~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~--~~~   77 (161)
                      .+||+|||+++.+.... ........||+.|+|||++.+.  .++.++||||+|++++++++|..||........  .+.
T Consensus       197 ~~kl~DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~  275 (355)
T 1vzo_A          197 HVVLTDFGLSKEFVADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS  275 (355)
T ss_dssp             CEEESCSSEEEECCGGG-GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHH
T ss_pred             cEEEeeCCCCeecccCC-CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHH
Confidence            58999999998753221 1223346799999999998753  378899999999999999999999965432211  111


Q ss_pred             HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHHHHH
Q 043981           78 HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTKLLK  141 (161)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~l~~  141 (161)
                      .......+.                   .+...+..+.+|+.+||..||.+||     |++++++|..-
T Consensus       276 ~~~~~~~~~-------------------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f  325 (355)
T 1vzo_A          276 RRILKSEPP-------------------YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF  325 (355)
T ss_dssp             HHHHHCCCC-------------------CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred             HHHhccCCC-------------------CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcch
Confidence            111000000                   0112234578999999999999999     99999998754

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.78  E-value=2.1e-20  Score=128.45  Aligned_cols=137  Identities=16%  Similarity=0.192  Sum_probs=83.0

Q ss_pred             ceeeecccccccccCCCC-ccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQ-SMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~-~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++....... ........++..|++||++.+ ..++.++||||+|++++++++|+.||........ +...
T Consensus       159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~  237 (320)
T 2i6l_A          159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ-MQLI  237 (320)
T ss_dssp             EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHH
T ss_pred             eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH-HHHH
Confidence            589999999987642211 112234567899999998765 5688999999999999999999999976443211 1111


Q ss_pred             hhhhcCCCCcc-----------ccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           80 VNDWLPISTME-----------VVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        80 ~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      .. ..+.....           ....................+..+.+|+.+||+.||.+|||++++++|-.
T Consensus       238 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  308 (320)
T 2i6l_A          238 LE-SIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPY  308 (320)
T ss_dssp             HH-HSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHH
T ss_pred             HH-hcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcc
Confidence            11 00000000           00000000000000001234567899999999999999999999998744

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.78  E-value=1e-19  Score=125.57  Aligned_cols=117  Identities=17%  Similarity=0.229  Sum_probs=74.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC-----CCCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR-----EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~-----~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||++.......  .......|+..|+|||++.     ...++.++||||+|++++++++|..||..........
T Consensus       167 ~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~  244 (326)
T 2x7f_A          167 EVKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF  244 (326)
T ss_dssp             CEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred             CEEEeeCcCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH
Confidence            57999999998753211  1223457899999999886     4558899999999999999999999986543221111


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      .  ........   ..              ....+..+.+|+.+||..||.+|||+.++++|-
T Consensus       245 ~--~~~~~~~~---~~--------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp  288 (326)
T 2x7f_A          245 L--IPRNPAPR---LK--------------SKKWSKKFQSFIESCLVKNHSQRPATEQLMKHP  288 (326)
T ss_dssp             H--HHHSCCCC---CS--------------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSH
T ss_pred             H--hhcCcccc---CC--------------ccccCHHHHHHHHHHhccChhhCCCHHHHhhCh
Confidence            0  00000000   00              011234588999999999999999999999874

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.78  E-value=7.4e-20  Score=133.78  Aligned_cols=116  Identities=20%  Similarity=0.236  Sum_probs=82.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccc--cchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEE--MTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~--~~~~~~   79 (161)
                      ++||+|||+++.+.....  .....+||+.|+|||++.+..++.++|+||+|+++|+|++|..||.......  ..+...
T Consensus       327 ~vkL~DFGla~~~~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~  404 (543)
T 3c4z_A          327 NVRISDLGLAVELKAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR  404 (543)
T ss_dssp             CEEECCCTTCEECCTTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHH
T ss_pred             CEEEeecceeeeccCCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHH
Confidence            589999999987643221  2234589999999999998889999999999999999999999997643211  111111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCH-----HHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINA-----KEIVTK  138 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~-----~~vl~~  138 (161)
                      ...... .              .    +...+..+.+|+.+||+.||.+||++     ++++.|
T Consensus       405 i~~~~~-~--------------~----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H  449 (543)
T 3c4z_A          405 VLEQAV-T--------------Y----PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH  449 (543)
T ss_dssp             HHHCCC-C--------------C----CTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred             Hhhccc-C--------------C----CcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence            110000 0              0    11223458899999999999999964     677765

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.78  E-value=6.1e-20  Score=125.54  Aligned_cols=119  Identities=16%  Similarity=0.123  Sum_probs=82.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC--CCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR--VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~--~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||++................|+..|++||++.+..  ++.++||||+|++++++++|..||.......  ....
T Consensus       147 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~  224 (305)
T 2wtk_C          147 TLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK--LFEN  224 (305)
T ss_dssp             CEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHH
T ss_pred             cEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHH
Confidence            47999999998764332222334467899999999987644  4778999999999999999999997532211  1111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ......         .          .+..++..+.+|+.+||+.||.+|||+.++++|-.-
T Consensus       225 i~~~~~---------~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~  267 (305)
T 2wtk_C          225 IGKGSY---------A----------IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWF  267 (305)
T ss_dssp             HHHCCC---------C----------CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHH
T ss_pred             HhcCCC---------C----------CCCccCHHHHHHHHHHccCChhhCCCHHHHhcCccc
Confidence            110000         0          011223457899999999999999999999998553

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.78  E-value=3.6e-20  Score=128.48  Aligned_cols=117  Identities=20%  Similarity=0.245  Sum_probs=83.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.......  ......|+..|++||++.+..++.++||||+|++++++++|..||.......... . ..
T Consensus       179 ~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~-~~  254 (335)
T 2owb_A          179 EVKIGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL-R-IK  254 (335)
T ss_dssp             CEEECCCTTCEECCSTTC--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-H-HH
T ss_pred             CEEEeeccCceecccCcc--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHH-H-Hh
Confidence            589999999987642221  2334578999999999988889999999999999999999999996543221110 0 00


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ... ...                  +...+..+.+|+.+||+.||.+|||+.++++|-.-
T Consensus       255 ~~~-~~~------------------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~  295 (335)
T 2owb_A          255 KNE-YSI------------------PKHINPVAASLIQKMLQTDPTARPTINELLNDEFF  295 (335)
T ss_dssp             HTC-CCC------------------CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHH
T ss_pred             cCC-CCC------------------CccCCHHHHHHHHHHccCChhHCcCHHHHhcCccc
Confidence            000 000                  01123457889999999999999999999988553

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.78  E-value=1.1e-20  Score=130.23  Aligned_cols=107  Identities=24%  Similarity=0.300  Sum_probs=78.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCC-CCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~-~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.....    ......||..|+|||++.+..+ +.++||||+|++++++++|..||......       .
T Consensus       188 ~~kL~Dfg~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-------~  256 (320)
T 3a99_A          188 ELKLIDFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-------I  256 (320)
T ss_dssp             EEEECCCTTCEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH-------H
T ss_pred             CEEEeeCccccccccc----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh-------h
Confidence            5899999999876422    2234568999999998876665 67789999999999999999998643110       0


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ..  ..          ..        ....+..+.+|+.+||+.||.+|||+.++++|-
T Consensus       257 ~~--~~----------~~--------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp  295 (320)
T 3a99_A          257 RG--QV----------FF--------RQRVSSECQHLIRWCLALRPSDRPTFEEIQNHP  295 (320)
T ss_dssp             HC--CC----------CC--------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred             cc--cc----------cc--------cccCCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence            00  00          00        011234588999999999999999999999874

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.78  E-value=5e-20  Score=125.45  Aligned_cols=117  Identities=19%  Similarity=0.245  Sum_probs=84.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.......  ......|+..|++||++.+..++.++|+||+|++++++++|..||.......... . ..
T Consensus       153 ~~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~-~-~~  228 (294)
T 2rku_A          153 EVKIGDFGLATKVEYDGE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL-R-IK  228 (294)
T ss_dssp             CEEECCCTTCEECCSTTC--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-H-HH
T ss_pred             CEEEEeccCceecccCcc--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-H-Hh
Confidence            579999999987643222  2334578999999999988889999999999999999999999996543221110 0 00


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      .   ...      .  .        +...+..+.+++.+||+.||.+|||+.++++|-.-
T Consensus       229 ~---~~~------~--~--------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~  269 (294)
T 2rku_A          229 K---NEY------S--I--------PKHINPVAASLIQKMLQTDPTARPTINELLNDEFF  269 (294)
T ss_dssp             T---TCC------C--C--------CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHH
T ss_pred             h---ccC------C--C--------ccccCHHHHHHHHHHcccChhhCcCHHHHhhChhe
Confidence            0   000      0  0        11223457899999999999999999999998654

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.77  E-value=7e-20  Score=125.05  Aligned_cols=127  Identities=20%  Similarity=0.301  Sum_probs=78.9

Q ss_pred             ceeeecccccccccCCCC---ccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchh
Q 043981            2 VAHLSDFSIAKLLTGEDQ---SMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~---~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~   77 (161)
                      .+||+|||+++.......   ........|++.|+|||++.+ ..++.++||||+|++++++++|..||...........
T Consensus       159 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~  238 (303)
T 2vwi_A          159 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLML  238 (303)
T ss_dssp             CEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH
T ss_pred             CEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHH
Confidence            579999999987643211   112234578999999998865 4588999999999999999999999976443322111


Q ss_pred             HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           78 HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      .. ....+...........          ....+..+.+|+.+||+.||.+|||+.++++|-
T Consensus       239 ~~-~~~~~~~~~~~~~~~~----------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~  289 (303)
T 2vwi_A          239 TL-QNDPPSLETGVQDKEM----------LKKYGKSFRKMISLCLQKDPEKRPTAAELLRHK  289 (303)
T ss_dssp             HH-TSSCCCTTC-----CC----------CCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTST
T ss_pred             Hh-ccCCCccccccccchh----------hhhhhHHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence            10 1000000000000000          012234588999999999999999999999873

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.77  E-value=6.2e-20  Score=128.03  Aligned_cols=132  Identities=17%  Similarity=0.159  Sum_probs=80.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++....     ......||..|+|||++.+ ..++.++||||+|++++++++|..||........ +....
T Consensus       164 ~~kl~Dfg~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~i~  237 (353)
T 3coi_A          164 ELKILDFGLARHADA-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ-LTQIL  237 (353)
T ss_dssp             CEEECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH-HHHHH
T ss_pred             cEEEeecccccCCCC-----CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH
Confidence            589999999986532     1234578999999998876 5689999999999999999999999976443211 11110


Q ss_pred             hhh-cC-CC----Cccc-----ccc-ccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDW-LP-IS----TMEV-----VDV-NLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~-~~-~~----~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ... .+ ..    ....     ... ........ .......+..+.+|+.+||+.||.+|||+.+++.|-.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~  308 (353)
T 3coi_A          238 KVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF  308 (353)
T ss_dssp             HHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred             HHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence            000 00 00    0000     000 00000000 0001233556899999999999999999999998744

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.77  E-value=1.4e-20  Score=134.64  Aligned_cols=122  Identities=16%  Similarity=0.180  Sum_probs=82.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC-----CCCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR-----EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~-----~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||+++....... ......+||+.|+|||++.     ...++.++||||+|++++||++|+.||........ +
T Consensus       213 ~vkL~DFGla~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~-~  290 (437)
T 4aw2_A          213 HIRLADFGSCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-Y  290 (437)
T ss_dssp             CEEECCCTTCEECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-H
T ss_pred             CEEEcchhhhhhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH-H
Confidence            589999999987643222 2233468999999999986     45689999999999999999999999976433221 1


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCccc--CCCHHHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQ--RINAKEIVTKLL  140 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~--Rps~~~vl~~l~  140 (161)
                      ...............               ....+..+.+|+.+||..+|++  |++++++++|-.
T Consensus       291 ~~i~~~~~~~~~p~~---------------~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpf  341 (437)
T 4aw2_A          291 GKIMNHKERFQFPTQ---------------VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPF  341 (437)
T ss_dssp             HHHHTHHHHCCCCSS---------------CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGG
T ss_pred             HhhhhccccccCCcc---------------cccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCc
Confidence            110000000000000               0112345889999999999988  999999998843

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.77  E-value=5.7e-20  Score=125.31  Aligned_cols=118  Identities=18%  Similarity=0.176  Sum_probs=81.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC------CCCCCCCccchhhhHHHHHHHhcCCCCccccccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR------EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMT   75 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~------~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~   75 (161)
                      .+||+|||+++......   ......|+..|++||++.      ...++.++||||+|++++++++|..||.......  
T Consensus       162 ~~kl~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--  236 (298)
T 1phk_A          162 NIKLTDFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML--  236 (298)
T ss_dssp             CEEECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--
T ss_pred             cEEEecccchhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH--
Confidence            57999999998764322   223457899999999874      3458889999999999999999999986533221  


Q ss_pred             hhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           76 LKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ...........               ...+.....+..+.+|+.+||+.||.+|||+.++++|-
T Consensus       237 ~~~~~~~~~~~---------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~  285 (298)
T 1phk_A          237 MLRMIMSGNYQ---------------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHP  285 (298)
T ss_dssp             HHHHHHHTCCC---------------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSG
T ss_pred             HHHHHhcCCcc---------------cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhCh
Confidence            11111100000               00000123345688999999999999999999998763

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.77  E-value=1.5e-19  Score=122.05  Aligned_cols=115  Identities=20%  Similarity=0.236  Sum_probs=73.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCC-CCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~-~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++......   ......|++.|++||++.+..+ +.++|+||+|++++++++|..||.......  .....
T Consensus       149 ~~~l~dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~  223 (276)
T 2h6d_A          149 NAKIADFGLSNMMSDGE---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT--LFKKI  223 (276)
T ss_dssp             CEEECCCCGGGCCCC----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHH
T ss_pred             CEEEeecccccccCCCc---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--HHHHh
Confidence            47999999998764321   1234568999999999887665 578999999999999999999986532211  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ......           .        +...+..+.+++.+||+.||.+|||+.++++|-.
T Consensus       224 ~~~~~~-----------~--------~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~  264 (276)
T 2h6d_A          224 RGGVFY-----------I--------PEYLNRSVATLLMHMLQVDPLKRATIKDIREHEW  264 (276)
T ss_dssp             HHCCCC-----------C--------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHH
T ss_pred             hcCccc-----------C--------chhcCHHHHHHHHHHccCChhhCCCHHHHHhChh
Confidence            100000           0        1112345789999999999999999999999744

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.77  E-value=3.4e-20  Score=126.67  Aligned_cols=117  Identities=19%  Similarity=0.241  Sum_probs=77.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCC-----CCCCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYG-----REGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~-----~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||++......  ........|+..|+|||++     ....++.++||||+|++++++++|..||........ .
T Consensus       155 ~~kl~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~  231 (302)
T 2j7t_A          155 DIRLADFGVSAKNLKT--LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-L  231 (302)
T ss_dssp             CEEECCCHHHHHHHHH--HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-H
T ss_pred             CEEEEECCCCcccccc--ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH-H
Confidence            4799999997653211  1112335689999999987     356688999999999999999999999876433211 1


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ........+.    .             ..+...+..+.+++.+||..||.+|||+.++++|
T Consensus       232 ~~~~~~~~~~----~-------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h  276 (302)
T 2j7t_A          232 LKIAKSDPPT----L-------------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH  276 (302)
T ss_dssp             HHHHHSCCCC----C-------------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred             HHHhccCCcc----c-------------CCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence            1111100000    0             0012233458899999999999999999999876

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.76  E-value=1.4e-19  Score=134.58  Aligned_cols=131  Identities=17%  Similarity=0.093  Sum_probs=80.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......   ......||..|+|||++.+..++.++||||+|++++++++|..||...............
T Consensus       162 ~vKL~DFG~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~  238 (676)
T 3qa8_A          162 IHKIIDLGYAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVRE  238 (676)
T ss_dssp             EEEECSCCCCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC-
T ss_pred             eEEEccccccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhc
Confidence            48999999998764322   224467999999999999888999999999999999999999998653211100000000


Q ss_pred             hhc-----CCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHH
Q 043981           82 DWL-----PISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVT  137 (161)
Q Consensus        82 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~  137 (161)
                      ...     ...........  .....+.......+..+.+|+.+||.+||.+|||+.+++.
T Consensus       239 ~~~~~~~~~~~l~g~~~~~--~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~  297 (676)
T 3qa8_A          239 KSNEHIVVYDDLTGAVKFS--SVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPN  297 (676)
T ss_dssp             -----CCSCCCCSSSCCCC--SSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCC
T ss_pred             ccchhhhhhhhhccccccc--cccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhc
Confidence            000     00000000000  0000011112345667899999999999999999988653

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.76  E-value=1.1e-19  Score=129.23  Aligned_cols=121  Identities=20%  Similarity=0.240  Sum_probs=81.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC-------CCCCCCCccchhhhHHHHHHHhcCCCCcccccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR-------EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEM   74 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~-------~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~   74 (161)
                      ++||+|||+++.+..... ......+||+.|+|||++.       ...++.++|+||+|++++||++|+.||........
T Consensus       200 ~vkL~DFGla~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~  278 (412)
T 2vd5_A          200 HIRLADFGSCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET  278 (412)
T ss_dssp             CEEECCCTTCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             CEEEeechhheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH
Confidence            589999999987643222 1223468999999999886       34589999999999999999999999976433211


Q ss_pred             chhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccC---CCHHHHHHHHH
Q 043981           75 TLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQR---INAKEIVTKLL  140 (161)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~R---ps~~~vl~~l~  140 (161)
                       +............          .     ......+.++.+|+.+||. +|.+|   +++++++.|-.
T Consensus       279 -~~~i~~~~~~~~~----------p-----~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpf  330 (412)
T 2vd5_A          279 -YGKIVHYKEHLSL----------P-----LVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPF  330 (412)
T ss_dssp             -HHHHHTHHHHCCC----------C---------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGG
T ss_pred             -HHHHHhcccCcCC----------C-----ccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCC
Confidence             1110000000000          0     0011234568899999999 99998   58999988743

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.76  E-value=6e-20  Score=124.40  Aligned_cols=109  Identities=12%  Similarity=0.116  Sum_probs=76.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||.++.....      ....||..|+|||++.+. .++.++||||+|++++++++|..++.....    .....
T Consensus       172 ~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----~~~~~  241 (289)
T 1x8b_A          172 MFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ----WHEIR  241 (289)
T ss_dssp             CEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH----HHHHH
T ss_pred             EEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH----HHHHH
Confidence            5799999999876422      224589999999998765 466789999999999999998876533211    11110


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ....+.                   .+...+..+.+|+.+||+.||.+|||+.++++|-
T Consensus       242 ~~~~~~-------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~  281 (289)
T 1x8b_A          242 QGRLPR-------------------IPQVLSQEFTELLKVMIHPDPERRPSAMALVKHS  281 (289)
T ss_dssp             TTCCCC-------------------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCT
T ss_pred             cCCCCC-------------------CCcccCHHHHHHHHHHhCCCcccCCCHHHHhhCh
Confidence            000000                   0112234588999999999999999999999874

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.75  E-value=1.4e-19  Score=124.27  Aligned_cols=108  Identities=23%  Similarity=0.297  Sum_probs=78.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCC-CCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-ANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~-~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.....    ......|+..|++||++.+..+. .++||||+|++++++++|+.||.....    ..   
T Consensus       178 ~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~---  246 (312)
T 2iwi_A          178 CAKLIDFGSGALLHDE----PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE----IL---  246 (312)
T ss_dssp             EEEECCCSSCEECCSS----CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH----HH---
T ss_pred             eEEEEEcchhhhcccC----cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH----Hh---
Confidence            4799999999876432    22345689999999988766654 489999999999999999999864211    00   


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ..  ...          .        ....+..+.+|+.+||+.||++|||+.++++|-.
T Consensus       247 ~~--~~~----------~--------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~  286 (312)
T 2iwi_A          247 EA--ELH----------F--------PAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPW  286 (312)
T ss_dssp             HT--CCC----------C--------CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTT
T ss_pred             hh--ccC----------C--------cccCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence            00  000          0        1122345789999999999999999999998744

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.74  E-value=4.4e-19  Score=120.95  Aligned_cols=120  Identities=19%  Similarity=0.195  Sum_probs=72.3

Q ss_pred             ceeeecccccccccCCCC------------ccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCcc
Q 043981            2 VAHLSDFSIAKLLTGEDQ------------SMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDE   68 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~------------~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~   68 (161)
                      .+||+|||+++.......            ........|+..|+|||++.+. .++.++||||+|++++++++   ||..
T Consensus       154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~  230 (303)
T 1zy4_A          154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST  230 (303)
T ss_dssp             CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred             CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC
Confidence            479999999987532110            1122345689999999998765 58999999999999999997   4432


Q ss_pred             ccccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           69 IFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      .......... ..... ...              +.......+..+.+++.+||+.||.+|||+.++++|-+
T Consensus       231 ~~~~~~~~~~-~~~~~-~~~--------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~  286 (303)
T 1zy4_A          231 GMERVNILKK-LRSVS-IEF--------------PPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGW  286 (303)
T ss_dssp             HHHHHHHHHH-HHSTT-CCC--------------CTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSC
T ss_pred             chhHHHHHHh-ccccc-ccc--------------CccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCC
Confidence            2111111111 00000 000              00001223345789999999999999999999998744

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.68  E-value=3.7e-17  Score=122.80  Aligned_cols=111  Identities=18%  Similarity=0.188  Sum_probs=79.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....      ....||+.|++||++.+. ++.++||||+|++++++++|..|+.......        
T Consensus       219 ~~kl~DFG~a~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~--------  283 (681)
T 2pzi_A          219 QLKLIDLGAVSRINSF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDG--------  283 (681)
T ss_dssp             CEEECCCTTCEETTCC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSS--------
T ss_pred             cEEEEecccchhcccC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccc--------
Confidence            4799999999876322      345799999999988654 4888999999999999999988865421110        


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCC-HHHHHHHHHHhHHHh
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRIN-AKEIVTKLLKIRDSL  146 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-~~~vl~~l~~~~~~~  146 (161)
                            ..        ..     ......+..+.+|+.+||+.||.+||+ ++++.+.|..+..+.
T Consensus       284 ------~~--------~~-----~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~  330 (681)
T 2pzi_A          284 ------LP--------ED-----DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV  330 (681)
T ss_dssp             ------CC--------TT-----CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred             ------cc--------cc-----ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence                  00        00     001123356889999999999999995 677777777776544

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.64  E-value=9.3e-17  Score=109.65  Aligned_cols=104  Identities=17%  Similarity=0.202  Sum_probs=66.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++...                        +..++.++||||+|++++++++|..||..........     
T Consensus       158 ~~kl~Dfg~a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~-----  208 (299)
T 3m2w_A          158 ILKLTDFGFAKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-----  208 (299)
T ss_dssp             CEEECCCTTCEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C-----
T ss_pred             cEEEeccccccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH-----
Confidence            47899999886532                        1236778999999999999999999996533211000     


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                           ......   ...............+..+.+|+.+||+.||.+|||+.++++|-.-.
T Consensus       209 -----~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~  261 (299)
T 3m2w_A          209 -----GMKTRI---RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM  261 (299)
T ss_dssp             -----CSCCSS---CTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             -----HHHHHH---hhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhc
Confidence                 000000   00000111111123456689999999999999999999999986543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.50  E-value=5.4e-15  Score=102.45  Aligned_cols=111  Identities=9%  Similarity=0.050  Sum_probs=72.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHH-HHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM-LMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~i-l~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+|+....       ...+||+.|+|||++.+.. +.++||||+++. ..+++.|..||..............
T Consensus       220 ~vkL~DFG~a~~~~~-------~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~  291 (336)
T 2vuw_A          220 QVSIIDYTLSRLERD-------GIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKML  291 (336)
T ss_dssp             EEEECCCTTCBEEET-------TEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHH
T ss_pred             eEEEeeccccEecCC-------CcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhh
Confidence            689999999987632       2357999999999998766 889999998666 6778888888743210000000000


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHH-HH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIV-TK  138 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl-~~  138 (161)
                      ..   ..          .............+..+.+|+.+||++|     |++|++ +|
T Consensus       292 ~~---~~----------~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~H  332 (336)
T 2vuw_A          292 KQ---MT----------FKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQH  332 (336)
T ss_dssp             HT---CC----------CSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHC
T ss_pred             hh---hc----------cCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcC
Confidence            00   00          0000011123567788999999999987     999998 65

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.36  E-value=4.1e-13  Score=91.17  Aligned_cols=90  Identities=10%  Similarity=-0.032  Sum_probs=59.4

Q ss_pred             CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhc
Q 043981           43 VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT  122 (161)
Q Consensus        43 ~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl  122 (161)
                      ++.++||||+|+++|++++|+.||.............          ....    .............+..+.+|+.+||
T Consensus       179 ~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~----------~~~~----~~~~~~~~~~~~~~~~l~~li~~~l  244 (286)
T 3uqc_A          179 ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE----------RDTA----GQPIEPADIDRDIPFQISAVAARSV  244 (286)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC----------BCTT----SCBCCHHHHCTTSCHHHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH----------HHhc----cCCCChhhcccCCCHHHHHHHHHHc
Confidence            7888999999999999999999997644322110000          0000    0000000111234556899999999


Q ss_pred             ccCcccCCCHHHHHHHHHHhHHHhh
Q 043981          123 VESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus       123 ~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                      +.||.+| |+.++++.|+++.....
T Consensus       245 ~~dP~~R-s~~el~~~L~~~~~~~~  268 (286)
T 3uqc_A          245 QGDGGIR-SASTLLNLMQQATAVAD  268 (286)
T ss_dssp             CTTSSCC-CHHHHHHHHHHHHC---
T ss_pred             ccCCccC-CHHHHHHHHHHHhccCC
Confidence            9999999 99999999999886544

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.43  E-value=4.7e-09  Score=77.58  Aligned_cols=58  Identities=19%  Similarity=-0.020  Sum_probs=29.5

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG   62 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g   62 (161)
                      .+||+|||+|+......  ......+||+.|++||++.+ .+...+|+|++|++++++.++
T Consensus       377 ~vKL~DFGlAr~~~~~~--~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~  434 (569)
T 4azs_A          377 HARLIDFGSIVTTPQDC--SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQP  434 (569)
T ss_dssp             CEEECCCTTEESCC-----CCSHHHHHHHHHHHHHHC------------------CCCCTT
T ss_pred             CEEEeecccCeeCCCCC--ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccc
Confidence            58999999998764322  23345789999999999875 456779999999987765543

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=97.83  E-value=2.3e-07  Score=68.26  Aligned_cols=65  Identities=14%  Similarity=0.084  Sum_probs=48.5

Q ss_pred             ceeeecccccccccCCCCcc-----ccccccccccccCCCCCCC--CCCCCCccchhhhHHHHHHHhcCCCC
Q 043981            2 VAHLSDFSIAKLLTGEDQSM-----TQTQTLATIGYMAPEYGRE--GRVSANGDVYSFGIMLMETFTGKKPT   66 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~-----~~~~~~g~~~~~~Pe~~~~--~~~~~~~dv~s~g~il~e~~~g~~p~   66 (161)
                      .+||+|||+++.........     ......||+.|++||++..  ..|+...|+|+..+-..+.+.++.+|
T Consensus       467 ~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          467 DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            47999999999864321110     1235689999999999876  45788889999998888888777665

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	161
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-24
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-19
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-19
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	7e-19
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-18
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	6e-18
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	7e-18
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-17
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-17
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-17
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	4e-17
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	6e-17
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	9e-17
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	1e-16
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-16
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	5e-16
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	6e-16
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-15
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-15
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-15
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-15
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	6e-15
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	7e-15
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-14
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-14
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	4e-14
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	7e-14
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-13
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-13
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	7e-13
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-12
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-12
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-12
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	6e-12
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-11
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	5e-11
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	6e-11
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	7e-11
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	7e-11
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	9e-11
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-10
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	9e-10
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-09
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-09
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	4e-09
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	8e-09
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-08
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-08
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-08
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	5e-08
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	8e-08
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-07
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-07
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-05
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-05
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-05
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-05
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-05
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	4e-05
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	7e-05
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	3e-04
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	7e-04

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.5 bits (232), Expect = 2e-24
 Identities = 33/149 (22%), Positives = 57/149 (38%), Gaps = 18/149 (12%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY---GREGRVSANGDVYSFGIMLM 57
           +   + DF +A + +    S    Q   +I +MAPE      +   S   DVY+FGI+L 
Sbjct: 141 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 200

Query: 58  ETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNL 117
           E  TG+ P   I N +  +      +L     +V               +  C   +  L
Sbjct: 201 ELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKV---------------RSNCPKAMKRL 245

Query: 118 AMACTVESPEQRINAKEIVTKLLKIRDSL 146
              C  +  ++R    +I+  +  +  SL
Sbjct: 246 MAECLKKKRDERPLFPQILASIELLARSL 274

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.6 bits (198), Expect = 2e-19
 Identities = 26/150 (17%), Positives = 58/150 (38%), Gaps = 21/150 (14%)

Query: 1   MVAHLSDFSIAKLLTGED--QSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLME 58
               ++DF +A+ +  ++      +T     + +MA E  +  + +   DV+SFG++L E
Sbjct: 167 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE 226

Query: 59  TFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
             T   P                   P   +   D+ +   +    +  E C   ++ + 
Sbjct: 227 LMTRGAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVM 267

Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLR 148
           + C     E R +  E+V+++  I  + + 
Sbjct: 268 LKCWHPKAEMRPSFSELVSRISAIFSTFIG 297

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.0 bits (194), Expect = 5e-19
 Identities = 29/145 (20%), Positives = 57/145 (39%), Gaps = 20/145 (13%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            V  +SDF + + +  +  + +   T   + + +PE     R S+  DV+SFG+++ E F
Sbjct: 138 QVIKVSDFGMTRFVLDDQYTSSTG-TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
           +  K   E  +    ++     +       +    L S               V+ +   
Sbjct: 197 SEGKIPYENRSNSEVVEDISTGF------RLYKPRLASTH-------------VYQIMNH 237

Query: 121 CTVESPEQRINAKEIVTKLLKIRDS 145
           C  E PE R     ++ +L +I +S
Sbjct: 238 CWKERPEDRPAFSRLLRQLAEIAES 262

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.7 bits (193), Expect = 7e-19
 Identities = 30/146 (20%), Positives = 61/146 (41%), Gaps = 20/146 (13%)

Query: 1   MVAHLSDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
           +V  +SDF ++++L    + + T +     I + APE     + ++  DV+SFGI++ E 
Sbjct: 147 LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEV 206

Query: 60  FTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
            T  +      +    +K   + +   + M+                   C S ++ L M
Sbjct: 207 MTYGERPYWELSNHEVMKAINDGFRLPTPMD-------------------CPSAIYQLMM 247

Query: 120 ACTVESPEQRINAKEIVTKLLKIRDS 145
            C  +   +R    +IV+ L K+  +
Sbjct: 248 QCWQQERARRPKFADIVSILDKLIRA 273

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.0 bits (189), Expect = 2e-18
 Identities = 25/142 (17%), Positives = 60/142 (42%), Gaps = 20/142 (14%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            V  +SDF +++ +  +D+  +   +   + +  PE     + S+  D+++FG+++ E +
Sbjct: 137 GVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 195

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
           +  K   E F    T +H                +L S++             V+ +  +
Sbjct: 196 SLGKMPYERFTNSETAEHIAQGLRL------YRPHLASEK-------------VYTIMYS 236

Query: 121 CTVESPEQRINAKEIVTKLLKI 142
           C  E  ++R   K +++ +L +
Sbjct: 237 CWHEKADERPTFKILLSNILDV 258

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.2 bits (187), Expect = 6e-18
 Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 23/136 (16%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
               + D  +A L             + T  +MAPE   E +   + DVY+FG+ ++E  
Sbjct: 152 GSVKIGDLGLATLKRAS----FAKAVIGTPEFMAPEM-YEEKYDESVDVYAFGMCMLEMA 206

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
           T + P  E  N     +   +   P S  +V    +                    +   
Sbjct: 207 TSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVK------------------EIIEG 248

Query: 121 CTVESPEQRINAKEIV 136
           C  ++ ++R + K+++
Sbjct: 249 CIRQNKDERYSIKDLL 264

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.4 bits (187), Expect = 7e-18
 Identities = 22/154 (14%), Positives = 47/154 (30%), Gaps = 9/154 (5%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMT--QTQTLATIGYMAPEY------GREGRVSANGDVYSF 52
               ++D  +A        ++       + T  YMAPE        +        D+Y+ 
Sbjct: 145 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAM 204

Query: 53  GIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTM-EVVDVNLLSQEDIHFVAKEQCV 111
           G++  E            + ++     V     +  M +VV    L     +     + +
Sbjct: 205 GLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEAL 264

Query: 112 SFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS 145
             +  +   C   +   R+ A  I   L ++   
Sbjct: 265 RVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.5 bits (185), Expect = 1e-17
 Identities = 28/139 (20%), Positives = 51/139 (36%), Gaps = 20/139 (14%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           +V  ++DF +A+L+  +++   +      I + APE    GR +   DV+SFGI+L E  
Sbjct: 150 LVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 208

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
           T  +           L      +                         +C   + +L   
Sbjct: 209 TKGRVPYPGMVNREVLDQVERGYRM-------------------PCPPECPESLHDLMCQ 249

Query: 121 CTVESPEQRINAKEIVTKL 139
           C  + PE+R   + +   L
Sbjct: 250 CWRKEPEERPTFEYLQAFL 268

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.1 bits (184), Expect = 1e-17
 Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 20/139 (14%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           +   ++DF +A+L+  +++   +      I + APE    G  +   DV+SFGI+L E  
Sbjct: 146 LSCKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
           T  +           +++    +                     V  + C   ++ L   
Sbjct: 205 THGRIPYPGMTNPEVIQNLERGYRM-------------------VRPDNCPEELYQLMRL 245

Query: 121 CTVESPEQRINAKEIVTKL 139
           C  E PE R     + + L
Sbjct: 246 CWKERPEDRPTFDYLRSVL 264

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 75.2 bits (184), Expect = 2e-17
 Identities = 34/152 (22%), Positives = 59/152 (38%), Gaps = 26/152 (17%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTL---ATIGYMAPEYGREGRVSANGDVYSFGIMLM 57
           +V  +SDF +++ L  +    T T  L     I + APE  +  + ++  DV+S+GI++ 
Sbjct: 165 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMW 224

Query: 58  ETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNL 117
           E  +  +                    P   M   DV    ++D        C S +  L
Sbjct: 225 EVMSYGER-------------------PYWDMTNQDVINAIEQDYRLPPPMDCPSALHQL 265

Query: 118 AMACTVESPEQRINAKEIVTKLLKIRDSLLRN 149
            + C  +    R    +IV  L    D ++RN
Sbjct: 266 MLDCWQKDRNHRPKFGQIVNTL----DKMIRN 293

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 74.1 bits (181), Expect = 4e-17
 Identities = 26/142 (18%), Positives = 50/142 (35%), Gaps = 19/142 (13%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           MV  ++DF +++ +   D           I +M PE     R +   DV+++G++L E F
Sbjct: 177 MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 236

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
           +           E  + +  +  +                       E C   ++NL   
Sbjct: 237 SYGLQPYYGMAHEEVIYYVRDGNIL-------------------ACPENCPLELYNLMRL 277

Query: 121 CTVESPEQRINAKEIVTKLLKI 142
           C  + P  R +   I   L ++
Sbjct: 278 CWSKLPADRPSFCSIHRILQRM 299

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.6 bits (180), Expect = 6e-17
 Identities = 30/154 (19%), Positives = 56/154 (36%), Gaps = 22/154 (14%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
             A +SDF ++K L  +D   T        + + APE     + S+  DV+S+G+ + E 
Sbjct: 146 HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEA 205

Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
            + G+KP  ++   E+         +                        +C   ++ L 
Sbjct: 206 LSYGQKPYKKMKGPEVMAFIEQGKRMECP--------------------PECPPELYALM 245

Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGG 152
             C +   E R +   +  ++     SL   V G
Sbjct: 246 SDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEG 279

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 9e-17
 Identities = 24/142 (16%), Positives = 52/142 (36%), Gaps = 19/142 (13%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
               ++DF +AKLL  E++          I +MA E       +   DV+S+G+ + E  
Sbjct: 148 QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 207

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
           T                       P   +   +++ + ++         C   V+ + + 
Sbjct: 208 TFGSK-------------------PYDGIPASEISSILEKGERLPQPPICTIDVYMIMVK 248

Query: 121 CTVESPEQRINAKEIVTKLLKI 142
           C +   + R   +E++ +  K+
Sbjct: 249 CWMIDADSRPKFRELIIEFSKM 270

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.4 bits (177), Expect = 1e-16
 Identities = 28/141 (19%), Positives = 52/141 (36%), Gaps = 22/141 (15%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
             A +SDF ++K L  ++            + + APE     + S+  DV+SFG+++ E 
Sbjct: 144 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEA 203

Query: 60  FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
           F+ G+KP   +   E+T      + +                         C   +++L 
Sbjct: 204 FSYGQKPYRGMKGSEVTAMLEKGERMGCP--------------------AGCPREMYDLM 243

Query: 119 MACTVESPEQRINAKEIVTKL 139
             C     E R     +  +L
Sbjct: 244 NLCWTYDVENRPGFAAVELRL 264

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.0 bits (176), Expect = 2e-16
 Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 19/136 (13%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMET 59
               +SDF +A +    ++     +   T+ Y+APE  +     A   DV+S GI+L   
Sbjct: 140 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 199

Query: 60  FTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
             G+ P D+  +       W      ++  + +D   L                   L  
Sbjct: 200 LAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL------------------ALLH 241

Query: 120 ACTVESPEQRINAKEI 135
              VE+P  RI   +I
Sbjct: 242 KILVENPSARITIPDI 257

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.8 bits (173), Expect = 5e-16
 Identities = 22/136 (16%), Positives = 40/136 (29%), Gaps = 22/136 (16%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
               L DF +A++L  +           T  YM+PE       +   D++S G +L E  
Sbjct: 151 QNVKLGDFGLARILNHDTSFAKAFVG--TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 208

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
               P      +E+  K     +  I                      +    +  +   
Sbjct: 209 ALMPPFTAFSQKELAGKIREGKFRRIP--------------------YRYSDELNEIITR 248

Query: 121 CTVESPEQRINAKEIV 136
                   R + +EI+
Sbjct: 249 MLNLKDYHRPSVEEIL 264

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (173), Expect = 6e-16
 Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 18/139 (12%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            V  + DF +A+ +  +   + +      + +MAPE   EG  +   DV+S+GI+L E F
Sbjct: 201 KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 260

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
           +           +      +                  Q              ++ +  +
Sbjct: 261 SLGVNPYPGIPVDANFYKLI------------------QNGFKMDQPFYATEEIYIIMQS 302

Query: 121 CTVESPEQRINAKEIVTKL 139
           C      +R +   + + L
Sbjct: 303 CWAFDSRKRPSFPNLTSFL 321

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.3 bits (169), Expect = 1e-15
 Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 24/143 (16%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            VA +SDF + K       S TQ      + + APE  RE + S   DV+SFGI+L E +
Sbjct: 140 NVAKVSDFGLTKEA-----SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 194

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
           +  +                    P   + + DV    ++     A + C   V+ +   
Sbjct: 195 SFGRV-------------------PYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKN 235

Query: 121 CTVESPEQRINAKEIVTKLLKIR 143
           C       R +  ++  +L  I+
Sbjct: 236 CWHLDAAMRPSFLQLREQLEHIK 258

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.8 bits (170), Expect = 2e-15
 Identities = 24/142 (16%), Positives = 51/142 (35%), Gaps = 18/142 (12%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            +  + DF +A+ +  +   + +      + +MAPE       +   DV+S+GI L E F
Sbjct: 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 241

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
           +           +      +                  +E    ++ E   + ++++   
Sbjct: 242 SLGSSPYPGMPVDSKFYKMI------------------KEGFRMLSPEHAPAEMYDIMKT 283

Query: 121 CTVESPEQRINAKEIVTKLLKI 142
           C    P +R   K+IV  + K 
Sbjct: 284 CWDADPLKRPTFKQIVQLIEKQ 305

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.8 bits (170), Expect = 2e-15
 Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 20/142 (14%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            +  ++DF +++L+TG D           I + APE     + S   DV++FG++L E  
Sbjct: 152 HLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 210

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
           T         +     +                     ++D      E C   V+ L  A
Sbjct: 211 TYGMSPYPGIDLSQVYELL-------------------EKDYRMERPEGCPEKVYELMRA 251

Query: 121 CTVESPEQRINAKEIVTKLLKI 142
           C   +P  R +  EI      +
Sbjct: 252 CWQWNPSDRPSFAEIHQAFETM 273

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.5 bits (169), Expect = 2e-15
 Identities = 29/150 (19%), Positives = 58/150 (38%), Gaps = 19/150 (12%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
               + DF + + +   D      + L  + +M+PE  ++G  +   DV+SFG++L E  
Sbjct: 170 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 229

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
           T  +   +  + E  L+  +   L                       + C   +F L   
Sbjct: 230 TLAEQPYQGLSNEQVLRFVMEGGLLD-------------------KPDNCPDMLFELMRM 270

Query: 121 CTVESPEQRINAKEIVTKLLKIRDSLLRNV 150
           C   +P+ R +  EI++ + +  +   R V
Sbjct: 271 CWQYNPKMRPSFLEIISSIKEEMEPGFREV 300

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.9 bits (165), Expect = 6e-15
 Identities = 28/144 (19%), Positives = 46/144 (31%), Gaps = 19/144 (13%)

Query: 1   MVAHLSDFSIAKLLT-GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
            +  + DF + + L   +D  + Q        + APE  +    S   D + FG+ L E 
Sbjct: 148 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 207

Query: 60  FTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
           FT  +      N    L                       E       E C   ++N+ +
Sbjct: 208 FTYGQEPWIGLNGSQILHKIDK------------------EGERLPRPEDCPQDIYNVMV 249

Query: 120 ACTVESPEQRINAKEIVTKLLKIR 143
            C    PE R     +   LL+ +
Sbjct: 250 QCWAHKPEDRPTFVALRDFLLEAQ 273

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 67.8 bits (165), Expect = 7e-15
 Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 19/146 (13%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
               + DF IA+ +     S+TQT  +  T  Y++PE  R   V A  DVYS G +L E 
Sbjct: 148 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 207

Query: 60  FTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
            TG+ P        +  +H   D +P S         LS +    V K            
Sbjct: 208 LTGEPPFTGDSPVSVAYQHVREDPIPPSA----RHEGLSADLDAVVLK------------ 251

Query: 120 ACTVESPEQRI-NAKEIVTKLLKIRD 144
               ++PE R   A E+   L+++ +
Sbjct: 252 -ALAKNPENRYQTAAEMRADLVRVHN 276

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.8 bits (162), Expect = 2e-14
 Identities = 26/150 (17%), Positives = 54/150 (36%), Gaps = 22/150 (14%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            VA ++DF +++   G++  + +T     + +MA E       + N DV+S+G++L E  
Sbjct: 164 YVAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 220

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
           +               +     +                          C   V++L   
Sbjct: 221 SLGGTPYCGMTCAELYEKLPQGYRL-------------------EKPLNCDDEVYDLMRQ 261

Query: 121 CTVESPEQRINAKEIVTKLLKIRDSLLRNV 150
           C  E P +R +  +I+  L ++ +     V
Sbjct: 262 CWREKPYERPSFAQILVSLNRMLEERKTYV 291

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.2 bits (161), Expect = 3e-14
 Identities = 28/158 (17%), Positives = 56/158 (35%), Gaps = 27/158 (17%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
               L DF ++  L     SM  +    T  YM+PE  +    S   D++S G+ L+E  
Sbjct: 142 GEIKLCDFGVSGQL---IDSMANSFV-GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197

Query: 61  TGKKPTDEIFNEEMTLKH------WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFV 114
            G+ P      +E+ L           +  P        ++    +    +A  + + ++
Sbjct: 198 VGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYI 257

Query: 115 FN-----------------LAMACTVESPEQRINAKEI 135
            N                     C +++P +R + K++
Sbjct: 258 VNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.1 bits (160), Expect = 4e-14
 Identities = 25/145 (17%), Positives = 50/145 (34%), Gaps = 18/145 (12%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            V  + DF +A+ +  +   + +      + +MAPE   +   +   DV+SFG++L E F
Sbjct: 171 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 230

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
           +           +      +                  +E     A +     ++   + 
Sbjct: 231 SLGASPYPGVKIDEEFCRRL------------------KEGTRMRAPDYTTPEMYQTMLD 272

Query: 121 CTVESPEQRINAKEIVTKLLKIRDS 145
           C    P QR    E+V  L  +  +
Sbjct: 273 CWHGEPSQRPTFSELVEHLGNLLQA 297

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.3 bits (158), Expect = 7e-14
 Identities = 32/142 (22%), Positives = 55/142 (38%), Gaps = 19/142 (13%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
            V  ++DF +A+ +   D     T     + +MAPE   +   +   DV+SFG++L E F
Sbjct: 172 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 231

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
           T                       P   + V ++  L +E         C + ++ +   
Sbjct: 232 TLGGS-------------------PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRD 272

Query: 121 CTVESPEQRINAKEIVTKLLKI 142
           C    P QR   K++V  L +I
Sbjct: 273 CWHAVPSQRPTFKQLVEDLDRI 294

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.4 bits (156), Expect = 1e-13
 Identities = 29/145 (20%), Positives = 52/145 (35%), Gaps = 22/145 (15%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
               L DF +++ +            L  I +MAPE     R ++  DV+ FG+ + E  
Sbjct: 145 DCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203

Query: 61  T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
             G KP   + N ++  +    + LP+                       C   +++L  
Sbjct: 204 MHGVKPFQGVKNNDVIGRIENGERLPMP--------------------PNCPPTLYSLMT 243

Query: 120 ACTVESPEQRINAKEIVTKLLKIRD 144
            C    P +R    E+  +L  I +
Sbjct: 244 KCWAYDPSRRPRFTELKAQLSTILE 268

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.5 bits (154), Expect = 3e-13
 Identities = 28/130 (21%), Positives = 42/130 (32%), Gaps = 20/130 (15%)

Query: 6   SDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
           +DF     +T E    +      T  +MAPE           D++S GIM +E   G+ P
Sbjct: 158 TDFGFCAQITPEQSKRSTMVG--TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215

Query: 66  TDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVES 125
                          N    +   E      LS     F+ +             C    
Sbjct: 216 YLNENPLRALYLIATNGTPELQNPEK-----LSAIFRDFLNR-------------CLDMD 257

Query: 126 PEQRINAKEI 135
            E+R +AKE+
Sbjct: 258 VEKRGSAKEL 267

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.9 bits (150), Expect = 7e-13
 Identities = 21/132 (15%), Positives = 47/132 (35%), Gaps = 25/132 (18%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF  +       ++        T+ Y+ PE           D++S G++  E   GK 
Sbjct: 147 IADFGWSVHAPSSRRTTLCG----TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 202

Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
           P +    +E   +        IS +E    + +++     +++                 
Sbjct: 203 PFEANTYQETYKR--------ISRVEFTFPDFVTEGARDLISR-------------LLKH 241

Query: 125 SPEQRINAKEIV 136
           +P QR   +E++
Sbjct: 242 NPSQRPMLREVL 253

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.2 bits (148), Expect = 2e-12
 Identities = 23/135 (17%), Positives = 46/135 (34%), Gaps = 21/135 (15%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
           M   ++DF  AK+L+ E +       + T  Y++PE   E     + D+++ G ++ +  
Sbjct: 145 MHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 204

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            G  P     NE +  +  +                   +    V K             
Sbjct: 205 AGLPPFRA-GNEYLIFQKIIKLEYDFP-------EKFFPKARDLVEK------------- 243

Query: 121 CTVESPEQRINAKEI 135
             V    +R+  +E+
Sbjct: 244 LLVLDATKRLGCEEM 258

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 61.6 bits (149), Expect = 2e-12
 Identities = 23/131 (17%), Positives = 42/131 (32%), Gaps = 20/131 (15%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           L DF +   L  +      T T     + APE      V    D++S G++     +G  
Sbjct: 167 LIDFGLTAHLDPKQSVKVTTGTA---EFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLS 223

Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
           P     ++E        DW    +      + +S++   F+ K               + 
Sbjct: 224 PFGGENDDETLRNVKSCDWNMDDSA----FSGISEDGKDFIRK-------------LLLA 266

Query: 125 SPEQRINAKEI 135
            P  R+   + 
Sbjct: 267 DPNTRMTIHQA 277

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 60.5 bits (146), Expect = 5e-12
 Identities = 23/131 (17%), Positives = 42/131 (32%), Gaps = 20/131 (15%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           + DF +A  L  ++     T   AT  + APE      V    D+++ G++     +G  
Sbjct: 170 IIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLS 226

Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
           P     + E        DW           + +S E   F+                  +
Sbjct: 227 PFAGEDDLETLQNVKRCDWEFDEDA----FSSVSPEAKDFIKN-------------LLQK 269

Query: 125 SPEQRINAKEI 135
            P +R+   + 
Sbjct: 270 EPRKRLTVHDA 280

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.6 bits (144), Expect = 6e-12
 Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 25/140 (17%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY-----GREGRVSANGDVYSFGIM 55
               L+DF ++   T   Q         T  +MAPE       ++       DV+S GI 
Sbjct: 147 GDIKLADFGVSAKNTRTIQRRDSFI--GTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 204

Query: 56  LMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVF 115
           L+E    + P  E+    + LK   ++   ++          S     F+ K        
Sbjct: 205 LIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW-----SSNFKDFLKK-------- 251

Query: 116 NLAMACTVESPEQRINAKEI 135
                C  ++ + R    ++
Sbjct: 252 -----CLEKNVDARWTTSQL 266

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 58.5 bits (141), Expect = 2e-11
 Identities = 26/139 (18%), Positives = 46/139 (33%), Gaps = 28/139 (20%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY---GREGRVSANGDVYSFGIMLM 57
            +  L DF  A ++            + T  +MAPE      EG+     DV+S GI  +
Sbjct: 152 GLVKLGDFGSASIMA------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 205

Query: 58  ETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNL 117
           E    K P   +           N+   + +         S+   +FV            
Sbjct: 206 ELAERKPPLFNMNAMSALYHIAQNESPALQSGHW------SEYFRNFVDS---------- 249

Query: 118 AMACTVESPEQRINAKEIV 136
              C  + P+ R  ++ ++
Sbjct: 250 ---CLQKIPQDRPTSEVLL 265

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.1 bits (137), Expect = 5e-11
 Identities = 20/132 (15%), Positives = 43/132 (32%), Gaps = 20/132 (15%)

Query: 4   HLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGK 63
            + DF +A  +   D          T  ++APE      +    D++S G++     +G 
Sbjct: 157 KIIDFGLAHKI---DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 213

Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
            P      ++ TL +              +    S     F+ +               V
Sbjct: 214 SPFLGD-TKQETLANVSAVNYEFEDEYFSNT---SALAKDFIRR-------------LLV 256

Query: 124 ESPEQRINAKEI 135
           + P++R+  ++ 
Sbjct: 257 KDPKKRMTIQDS 268

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.2 bits (137), Expect = 6e-11
 Identities = 20/147 (13%), Positives = 37/147 (25%), Gaps = 18/147 (12%)

Query: 1   MVAHLSDFSIAKLLTGED-----QSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
            + ++ DF +AK                     T  Y +         S   D+ S G +
Sbjct: 143 NLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV 202

Query: 56  LMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVF 115
           LM    G  P   +       K+       +ST   V       E   ++          
Sbjct: 203 LMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNF-------- 254

Query: 116 NLAMACTVESPEQRINAKEIVTKLLKI 142
                C     + + +   +      +
Sbjct: 255 -----CRSLRFDDKPDYSYLRQLFRNL 276

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.0 bits (137), Expect = 7e-11
 Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 20/131 (15%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           + +F  A+ L   D             Y APE  +   VS   D++S G ++    +G  
Sbjct: 145 IIEFGQARQLKPGDNFRLLFTA---PEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGIN 201

Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
           P     N+++       ++             +S E + FV +               V+
Sbjct: 202 PFLAETNQQIIENIMNAEYTFDEEA----FKEISIEAMDFVDR-------------LLVK 244

Query: 125 SPEQRINAKEI 135
             + R+ A E 
Sbjct: 245 ERKSRMTASEA 255

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 56.6 bits (136), Expect = 7e-11
 Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 20/131 (15%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           +SDF ++K+   ED     +    T GY+APE   +   S   D +S G++      G  
Sbjct: 151 ISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 207

Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
           P  +  + ++  +    ++   S       + +S     F+                  +
Sbjct: 208 PFYDENDAKLFEQILKAEYEFDSPY----WDDISDSAKDFIRH-------------LMEK 250

Query: 125 SPEQRINAKEI 135
            PE+R   ++ 
Sbjct: 251 DPEKRFTCEQA 261

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (136), Expect = 9e-11
 Identities = 27/133 (20%), Positives = 45/133 (33%), Gaps = 23/133 (17%)

Query: 4   HLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGK 63
            ++DF + K     D          T  Y+APE     + + + D +SFG++L E   G+
Sbjct: 143 KIADFGMCKENMLGDAKTNTFC--GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 200

Query: 64  KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
            P     +EE        D              L +E    + K               V
Sbjct: 201 SPFHG-QDEEELFHSIRMDNPFYP-------RWLEKEAKDLLVK-------------LFV 239

Query: 124 ESPEQRINAKEIV 136
             PE+R+  +  +
Sbjct: 240 REPEKRLGVRGDI 252

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.9 bits (134), Expect = 2e-10
 Identities = 23/134 (17%), Positives = 43/134 (32%), Gaps = 16/134 (11%)

Query: 2   VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
           +  L+DF  AK  T  +   T   T     Y+APE     +   + D++S G+++     
Sbjct: 152 ILKLTDFGFAKETTSHNSLTTPCYT---PYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 208

Query: 62  GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMAC 121
           G  P        ++        +        + + +S+E    +                
Sbjct: 209 GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN-------------L 255

Query: 122 TVESPEQRINAKEI 135
               P QR+   E 
Sbjct: 256 LKTEPTQRMTITEF 269

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 53.7 bits (128), Expect = 9e-10
 Identities = 25/144 (17%), Positives = 52/144 (36%), Gaps = 11/144 (7%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE-YGREGRVSANGDVYSFGIMLMET 59
               ++DF +A+           T  + T+ Y AP+      + S   D++S G +  E 
Sbjct: 137 GELKIADFGLARAF--GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEM 194

Query: 60  FTGKKPTDEIFNEEMTLKHW-------VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVS 112
             G      +   +  ++ +         +W  ++ +   D N    E + + +  + + 
Sbjct: 195 VNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLD 254

Query: 113 FVF-NLAMACTVESPEQRINAKEI 135
               +L        P QRI AK+ 
Sbjct: 255 ESGIDLLSKMLKLDPNQRITAKQA 278

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 1e-09
 Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 8/125 (6%)

Query: 18  DQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLK 77
              M  T  + T+ Y APE   +   +   D++S G +  E F  K       ++   L 
Sbjct: 167 SFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS-SDVDQLG 225

Query: 78  HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFV-------FNLAMACTVESPEQRI 130
             ++        +      L ++  H  + +    FV        +L + C   +P +RI
Sbjct: 226 KILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI 285

Query: 131 NAKEI 135
           +A   
Sbjct: 286 SAYSA 290

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 52.5 bits (125), Expect = 2e-09
 Identities = 20/148 (13%), Positives = 41/148 (27%), Gaps = 18/148 (12%)

Query: 4   HLSDFSIAKLL----TGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME 58
           ++ DF + K      T +     + + L+ T  YM+         S   D+ + G + M 
Sbjct: 146 YVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMY 205

Query: 59  TFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
              G  P   +       K+        ST          +E              +   
Sbjct: 206 FLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEE-------------FYKYM 252

Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSL 146
                 + +   +   +     K+ + L
Sbjct: 253 HYARNLAFDATPDYDYLQGLFSKVLERL 280

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 51.6 bits (123), Expect = 4e-09
 Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 26/137 (18%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG------DVYSFGIMLME 58
           L+DF  +  L   D      +   T  Y+APE         +       D++S G+++  
Sbjct: 151 LTDFGFSCQL---DPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 207

Query: 59  TFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
              G  P      + + L+  ++      + E  D    S      V++           
Sbjct: 208 LLAGSPPFWHR-KQMLMLRMIMSGNYQFGSPEWDDY---SDTVKDLVSR----------- 252

Query: 119 MACTVESPEQRINAKEI 135
               V  P++R  A+E 
Sbjct: 253 --FLVVQPQKRYTAEEA 267

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (121), Expect = 8e-09
 Identities = 24/147 (16%), Positives = 50/147 (34%), Gaps = 12/147 (8%)

Query: 1   MVAHLSDFSIAKLLT-GEDQSMTQTQTLATIGYMAPEYGREGRVSAN-GDVYSFGIMLME 58
               + DF +A++     D +   T+ +AT  Y APE     +      D++S G +L E
Sbjct: 146 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 205

Query: 59  TFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF----- 113
             + +         +           P        +NL ++  +  +  +  V +     
Sbjct: 206 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFP 265

Query: 114 -----VFNLAMACTVESPEQRINAKEI 135
                  +L       +P +RI  ++ 
Sbjct: 266 NADSKALDLLDKMLTFNPHKRIEVEQA 292

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.2 bits (119), Expect = 1e-08
 Identities = 29/143 (20%), Positives = 45/143 (31%), Gaps = 10/143 (6%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMET 59
            V  L+DF +AK       +   T  + T  Y APE     R+     D+++ G +L E 
Sbjct: 137 GVLKLADFGLAKSF--GSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL 194

Query: 60  FTGKKP------TDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF 113
                        D++     TL     +  P        V   S   I           
Sbjct: 195 LLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGD 254

Query: 114 VF-NLAMACTVESPEQRINAKEI 135
              +L     + +P  RI A + 
Sbjct: 255 DLLDLIQGLFLFNPCARITATQA 277

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (119), Expect = 2e-08
 Identities = 30/139 (21%), Positives = 41/139 (29%), Gaps = 38/139 (27%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMET 59
               L DF    LL         T    T  Y  PE+ R  R    +  V+S GI+L + 
Sbjct: 148 GELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 203

Query: 60  FTGKKP---TDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFN 116
             G  P    +EI   ++  +  V                 S E  H +           
Sbjct: 204 VCGDIPFEHDEEIIRGQVFFRQRV-----------------SSECQHLIRW--------- 237

Query: 117 LAMACTVESPEQRINAKEI 135
               C    P  R   +EI
Sbjct: 238 ----CLALRPSDRPTFEEI 252

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (118), Expect = 2e-08
 Identities = 22/145 (15%), Positives = 47/145 (32%), Gaps = 12/145 (8%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE-YGREGRVSANGDVYSFGIMLMET 59
               L++F +A+      +  +    + T+ Y  P+        S + D++S G +  E 
Sbjct: 138 GELKLANFGLARAFGIPVRCYSAE--VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195

Query: 60  FTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVF---- 115
               +P     + +  LK         +  +   +  L     + +              
Sbjct: 196 ANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKL 255

Query: 116 -----NLAMACTVESPEQRINAKEI 135
                +L       +P QRI+A+E 
Sbjct: 256 NATGRDLLQNLLKCNPVQRISAEEA 280

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (115), Expect = 5e-08
 Identities = 26/144 (18%), Positives = 46/144 (31%), Gaps = 11/144 (7%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE-YGREGRVSANGDVYSFGIMLMET 59
               L+DF +A+      ++ T      T+ Y APE        S   D++S G +  E 
Sbjct: 139 GAIKLADFGLARAFGVPVRTYTHEVV--TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196

Query: 60  FTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVF---- 115
            T +         +   + +     P   +     ++   +        Q  S V     
Sbjct: 197 VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD 256

Query: 116 ----NLAMACTVESPEQRINAKEI 135
               +L        P +RI+AK  
Sbjct: 257 EDGRSLLSQMLHYDPNKRISAKAA 280

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.2 bits (114), Expect = 8e-08
 Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 26/141 (18%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
               ++DF  AK +     ++  T       Y+APE       + + D +SFGI++ E  
Sbjct: 141 GHIKITDFGFAKYVPDVTYTLCGT-----PDYIAPEVVSTKPYNKSIDWWSFGILIYEML 195

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
            G  P  +    +   K        I   E+      +++    +++             
Sbjct: 196 AGYTPFYDSNTMKTYEK--------ILNAELRFPPFFNEDVKDLLSR------------- 234

Query: 121 CTVESPEQRINAKEIVTKLLK 141
                  QR+   +  T+ +K
Sbjct: 235 LITRDLSQRLGNLQNGTEDVK 255

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 1e-07
 Identities = 26/149 (17%), Positives = 49/149 (32%), Gaps = 14/149 (9%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQT--LATIGYMAPEYGREGR-VSANGDVYSFGIMLM 57
            V  L+DF +A+  +    S     T  + T+ Y  PE     R      D++  G ++ 
Sbjct: 154 GVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMA 213

Query: 58  ETFTGKKPTDEIFNEEM-----------TLKHWVNDWLPISTMEVVDVNLLSQEDIHFVA 106
           E +T          +             T + W N        ++  V    ++    + 
Sbjct: 214 EMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLK 273

Query: 107 KEQCVSFVFNLAMACTVESPEQRINAKEI 135
                 +  +L     V  P QRI++ + 
Sbjct: 274 AYVRDPYALDLIDKLLVLDPAQRIDSDDA 302

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (110), Expect = 2e-07
 Identities = 23/141 (16%), Positives = 45/141 (31%), Gaps = 12/141 (8%)

Query: 4   HLSDFSIAKLLTGEDQSMTQTQTLATIGYMAP-EYGREGRVSANGDVYSFGIMLMETFTG 62
            L DF  AK L   + +++    + +  Y AP         +++ DV+S G +L E   G
Sbjct: 163 KLCDFGSAKQLVRGEPNVS---YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 219

Query: 63  KKP------TDEIFNEEMTLKHWVNDWLPISTMEVVDVNL--LSQEDIHFVAKEQCVSFV 114
           +         D++      L     + +        +     +       V + +     
Sbjct: 220 QPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEA 279

Query: 115 FNLAMACTVESPEQRINAKEI 135
             L       +P  R+   E 
Sbjct: 280 IALCSRLLEYTPTARLTPLEA 300

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.6 bits (96), Expect = 1e-05
 Identities = 21/162 (12%), Positives = 44/162 (27%), Gaps = 27/162 (16%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
              +L    IA L          T ++ T  Y +PE           D++S   ++ E  
Sbjct: 164 SPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELI 223

Query: 61  TGKKP---------------------------TDEIFNEEMTLKHWVNDWLPISTMEVVD 93
           TG                              +  + N + T   + +  L  +  ++  
Sbjct: 224 TGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKF 283

Query: 94  VNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 135
             L       +   +     + +         P +R +A  +
Sbjct: 284 WPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 325

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 2e-05
 Identities = 19/139 (13%), Positives = 42/139 (30%), Gaps = 14/139 (10%)

Query: 7   DFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPT 66
           DF +A+    E      T                   +   D++S G ++ E  TG+   
Sbjct: 164 DFGLARHTDDEMTGYVAT----RWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF 219

Query: 67  DEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF----------VFN 116
               + +           P + +     +  ++  I  + +   ++F            +
Sbjct: 220 PGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVD 279

Query: 117 LAMACTVESPEQRINAKEI 135
           L     V   ++RI A + 
Sbjct: 280 LLEKMLVLDSDKRITAAQA 298

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (96), Expect = 2e-05
 Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 11/125 (8%)

Query: 22  TQTQTLATIGYMAPE-YGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV 80
             T  + T  Y APE      R +   D++S G ++ E  TGK       + +   +   
Sbjct: 174 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMK 233

Query: 81  NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF----------VFNLAMACTVESPEQRI 130
               P +       +  ++  +  + + +   F            NL     V   EQR+
Sbjct: 234 VTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRV 293

Query: 131 NAKEI 135
            A E 
Sbjct: 294 TAGEA 298

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (95), Expect = 2e-05
 Identities = 23/130 (17%), Positives = 43/130 (33%), Gaps = 23/130 (17%)

Query: 5   LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
           ++DF + K    +  +M       T  Y+APE   +       D +  G+++ E   G+ 
Sbjct: 146 ITDFGLCKEGISDGATMKTF--CGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203

Query: 65  PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
           P     +E +     + +     T        LS E    +A                 +
Sbjct: 204 PFYNQDHERLFELILMEEIRFPRT--------LSPEAKSLLAG-------------LLKK 242

Query: 125 SPEQRINAKE 134
            P+QR+    
Sbjct: 243 DPKQRLGGGP 252

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 41.0 bits (95), Expect = 2e-05
 Identities = 19/153 (12%), Positives = 42/153 (27%), Gaps = 21/153 (13%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMET 59
               L D+ +A+              +A+  +  PE   + +    + D++S G ML   
Sbjct: 167 RKLRLIDWGLAEFY---HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM 223

Query: 60  FTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLS-----------------QEDI 102
              K+P     +    L             + +D   +                  +  +
Sbjct: 224 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV 283

Query: 103 HFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 135
           H   +        +          + R+ A+E 
Sbjct: 284 HSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 316

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 40.1 bits (93), Expect = 4e-05
 Identities = 23/141 (16%), Positives = 46/141 (32%), Gaps = 28/141 (19%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMET 59
               +SD  +A   + +    +      T GYMAPE  ++G    ++ D +S G ML + 
Sbjct: 144 GHVRISDLGLACDFSKKKPHASVG----THGYMAPEVLQKGVAYDSSADWFSLGCMLFKL 199

Query: 60  FTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
             G  P  +   ++      +   + +   +       S E    +              
Sbjct: 200 LRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF-----SPELRSLLEG------------ 242

Query: 120 ACTVESPEQRI-----NAKEI 135
                   +R+      A+E+
Sbjct: 243 -LLQRDVNRRLGCLGRGAQEV 262

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 7e-05
 Identities = 28/140 (20%), Positives = 49/140 (35%), Gaps = 25/140 (17%)

Query: 3   AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG--DVYSFGIMLMETF 60
             L+DF ++K    ++          TI YMAP+  R G    +   D +S G+++ E  
Sbjct: 168 VVLTDFGLSKEFVADETERAYDFC-GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELL 226

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
           TG  P    F  +            I   E      +S      + +             
Sbjct: 227 TGASP----FTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQR------------- 269

Query: 121 CTVESPEQRI-----NAKEI 135
             ++ P++R+     +A EI
Sbjct: 270 LLMKDPKKRLGCGPRDADEI 289

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 3e-04
 Identities = 25/150 (16%), Positives = 48/150 (32%), Gaps = 24/150 (16%)

Query: 7   DFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP- 65
           DF +A+       S   T  + T  Y APE         N D++S G ++ E    K   
Sbjct: 162 DFGLART---AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 218

Query: 66  --------------------TDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFV 105
                                + +   + T++++V +    + +    +   S       
Sbjct: 219 PGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSE 278

Query: 106 AKEQCVSFVFNLAMACTVESPEQRINAKEI 135
             +   S   +L     V  P +RI+  + 
Sbjct: 279 HNKLKASQARDLLSKMLVIDPAKRISVDDA 308

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.7 bits (84), Expect = 7e-04
 Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 6/86 (6%)

Query: 1   MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
               ++DF  AK + G   ++  T        +APE       +   D ++ G+++ E  
Sbjct: 178 GYIQVTDFGFAKRVKGRTWTLCGT-----PEALAPEIILSKGYNKAVDWWALGVLIYEMA 232

Query: 61  TGKKPTDEIFNEEMTLKHWVNDWLPI 86
            G  P           +  V+  +  
Sbjct: 233 AGYPPFFAD-QPIQIYEKIVSGKVRF 257

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	161
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.95
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.94
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.94
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.93
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.93
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.93
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.93
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.93
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.93
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.93
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.93
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.93
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.93
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.93
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.93
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.92
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.92
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.92
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.92
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.92
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.92
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.92
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.92
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.91
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.91
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.91
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.91
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.91
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.91
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.91
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.91
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.91
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.9
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.9
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.9
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.9
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.9
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.9
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.9
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.9
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.89
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.89
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.88
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.88
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.88
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.88
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.88
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.87
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.87
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.87
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.86
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.85
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.85
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.85
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.85
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.84
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.84
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.84
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.84
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.83
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.78

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=9.2e-30  Score=170.59  Aligned_cols=131  Identities=25%  Similarity=0.334  Sum_probs=88.1

Q ss_pred             CceeeecccccccccCCCCccccccccccccccCCCCCCCC---CCCCCccchhhhHHHHHHHhcCCCCccccccccchh
Q 043981            1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG---RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLK   77 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~---~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~   77 (161)
                      .++||+|||+|+...............||+.|+|||++.+.   .|+.++||||||+++||+++|+.||.+.........
T Consensus       141 ~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~  220 (276)
T d1uwha_         141 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF  220 (276)
T ss_dssp             SSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHH
T ss_pred             CCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHH
Confidence            36899999999876433333334556799999999998643   478899999999999999999999976544322221


Q ss_pred             HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           78 HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      .......+...               ......+++.+.+|+.+||+.||.+|||+++++++|+.+.+++
T Consensus       221 ~~~~~~~~p~~---------------~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~  274 (276)
T d1uwha_         221 MVGRGYLSPDL---------------SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL  274 (276)
T ss_dssp             HHHHTSCCCCG---------------GGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             HHhcCCCCCcc---------------hhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcC
Confidence            11111111000               0012234456889999999999999999999999999988653

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.4e-28  Score=166.69  Aligned_cols=125  Identities=21%  Similarity=0.329  Sum_probs=85.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcC-CCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGK-KPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~-~p~~~~~~~~~~~~~~~   80 (161)
                      ++||+|||+|+...............||+.|+|||++.+..++.++||||||+++|||+++. .||........ +....
T Consensus       172 ~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~-~~~~~  250 (299)
T d1ywna1         172 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRL  250 (299)
T ss_dssp             CEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH-HHHHH
T ss_pred             cEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHH-HHHHH
Confidence            68999999998765444433445578999999999999888999999999999999999864 56755433221 21111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      .......                  .+..+++++.+|+.+||+.||++|||++++++||+.+.++
T Consensus       251 ~~~~~~~------------------~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~  297 (299)
T d1ywna1         251 KEGTRMR------------------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  297 (299)
T ss_dssp             HHTCCCC------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hcCCCCC------------------CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            1111100                  0122344588999999999999999999999999998653

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.9e-28  Score=161.24  Aligned_cols=123  Identities=22%  Similarity=0.384  Sum_probs=77.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcC-CCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGK-KPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~-~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++....... .......||+.|+|||++.+..++.++||||||+++||++++. .|+... .... +....
T Consensus       139 ~~Kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~-~~~~-~~~~i  215 (263)
T d1sm2a_         139 VIKVSDFGMTRFVLDDQY-TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-SNSE-VVEDI  215 (263)
T ss_dssp             CEEECSCC-------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSC-CHHH-HHHHH
T ss_pred             CeEecccchheeccCCCc-eeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCC-CHHH-HHHHH
Confidence            689999999987643222 2223457899999999999889999999999999999999954 444332 2111 11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      .......                  .+..+++++.+|+.+||+.||++|||+++++++|+++.++
T Consensus       216 ~~~~~~~------------------~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~es  262 (263)
T d1sm2a_         216 STGFRLY------------------KPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES  262 (263)
T ss_dssp             HHTCCCC------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HhcCCCC------------------CccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhC
Confidence            1111000                  0122334588999999999999999999999999998753

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.7e-28  Score=167.91  Aligned_cols=121  Identities=20%  Similarity=0.311  Sum_probs=89.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      ++||+|||+|+...............||+.|+|||++.+..++.++||||||+++|||++ |..||.+...... +....
T Consensus       202 ~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~-~~~~~  280 (325)
T d1rjba_         202 VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN-FYKLI  280 (325)
T ss_dssp             EEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-HHHHH
T ss_pred             eEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHH-HHHHH
Confidence            589999999987654444334445678999999999988889999999999999999997 8999976443221 22111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ....+                  ...+..+++.+.+|+.+||+.||++|||++++++||..
T Consensus       281 ~~~~~------------------~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         281 QNGFK------------------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             HTTCC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             hcCCC------------------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence            11110                  00112334568999999999999999999999999963

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.6e-27  Score=159.12  Aligned_cols=114  Identities=21%  Similarity=0.354  Sum_probs=82.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+|+....    ......+||+.|+|||++.+ .++.++||||+||++|+|++|+.||...............
T Consensus       153 ~~Kl~DFGla~~~~~----~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~  227 (270)
T d1t4ha_         153 SVKIGDLGLATLKRA----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS  227 (270)
T ss_dssp             CEEECCTTGGGGCCT----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT
T ss_pred             CEEEeecCcceeccC----CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHc
Confidence            589999999986432    22345689999999998865 5999999999999999999999999754332221111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...+.                  ..+...++++.+|+.+||+.||++|||++|+++|
T Consensus       228 ~~~~~------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~H  266 (270)
T d1t4ha_         228 GVKPA------------------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH  266 (270)
T ss_dssp             TCCCG------------------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             CCCCc------------------ccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCC
Confidence            00000                  0012233458899999999999999999999886

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.8e-28  Score=161.69  Aligned_cols=119  Identities=23%  Similarity=0.315  Sum_probs=85.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCC-CCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~-~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+|+.+............+||+.|+|||++.+..+ +.++||||+|+++|+|++|+.||.........+....
T Consensus       141 ~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~  220 (271)
T d1nvra_         141 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK  220 (271)
T ss_dssp             CEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHH
T ss_pred             CEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHh
Confidence            589999999998654333333455789999999999987776 5679999999999999999999976544333222211


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ......                  ......+.++.+|+.+||+.||++|||++|+++|
T Consensus       221 ~~~~~~------------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  260 (271)
T d1nvra_         221 EKKTYL------------------NPWKKIDSAPLALLHKILVENPSARITIPDIKKD  260 (271)
T ss_dssp             TTCTTS------------------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred             cCCCCC------------------CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence            110000                  0012234457899999999999999999999876

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=6.6e-28  Score=164.54  Aligned_cols=126  Identities=23%  Similarity=0.347  Sum_probs=89.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      ++||+|||+|+.+.............||+.|+|||++.+..++.++||||||+++||+++ |..||.......  +....
T Consensus       149 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~--~~~~i  226 (317)
T d1xkka_         149 HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSIL  226 (317)
T ss_dssp             EEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGG--HHHHH
T ss_pred             CeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHH--HHHHH
Confidence            689999999998754433333344578999999999988889999999999999999998 788886643322  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                      .....                  .+.+..++..+.+|+.+||+.||.+|||+.+++.+|..+.....
T Consensus       227 ~~~~~------------------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~~~  275 (317)
T d1xkka_         227 EKGER------------------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ  275 (317)
T ss_dssp             HHTCC------------------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSHH
T ss_pred             HcCCC------------------CCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhChH
Confidence            11110                  00112334558899999999999999999999999999876543

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.2e-27  Score=160.25  Aligned_cols=125  Identities=21%  Similarity=0.363  Sum_probs=81.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+|+.+..... .......||+.|+|||++.+..++.++||||||+++||+++ |..||.......  +....
T Consensus       146 ~~Kl~DfG~a~~~~~~~~-~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~--~~~~i  222 (273)
T d1mp8a_         146 CVKLGDFGLSRYMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRI  222 (273)
T ss_dssp             EEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHH
T ss_pred             cEEEccchhheeccCCcc-eeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHH--HHHHH
Confidence            589999999987643222 22344668999999999988889999999999999999998 888887643322  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                      ......                  +.+..++..+.+|+.+||+.||++|||+.+++++|.++.++..
T Consensus       223 ~~~~~~------------------~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~k  271 (273)
T d1mp8a_         223 ENGERL------------------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK  271 (273)
T ss_dssp             HTTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HcCCCC------------------CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhh
Confidence            111100                  0112334568999999999999999999999999999887643

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.6e-27  Score=160.25  Aligned_cols=131  Identities=21%  Similarity=0.359  Sum_probs=95.5

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+|+.+...... .......||+.|+|||++.+..++.++||||||+++||+++ |..||......  .+...
T Consensus       147 ~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~--~~~~~  224 (285)
T d1u59a_         147 YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAF  224 (285)
T ss_dssp             EEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHH
T ss_pred             ceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH--HHHHH
Confidence            6899999999987543222 22334568999999999988889999999999999999998 89999764332  11111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhhhccC
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLRNVGG  152 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~~~~~  152 (161)
                      .......                  ..+..++.++.+|+.+||+.||++|||+.++++.|+....+......+
T Consensus       225 i~~~~~~------------------~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~~~~~~~  279 (285)
T d1u59a_         225 IEQGKRM------------------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEG  279 (285)
T ss_dssp             HHTTCCC------------------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCSS
T ss_pred             HHcCCCC------------------CCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhhhccch
Confidence            1111100                  011234456889999999999999999999999999888766655543

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=1.1e-27  Score=162.18  Aligned_cols=125  Identities=22%  Similarity=0.396  Sum_probs=80.5

Q ss_pred             CceeeecccccccccCCCCc---cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccch
Q 043981            1 MVAHLSDFSIAKLLTGEDQS---MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTL   76 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~---~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~   76 (161)
                      +++||+|||+|+.+......   .......||+.|+|||++.+..++.++||||||+++||+++ |..||.......  +
T Consensus       165 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~--~  242 (299)
T d1jpaa_         165 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD--V  242 (299)
T ss_dssp             CCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--H
T ss_pred             CcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHH--H
Confidence            36899999999876432221   11122457899999999988889999999999999999998 899987643321  1


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      .........                  .+.+..++..+.+|+.+||+.||.+|||+.++++.|+++.++
T Consensus       243 ~~~i~~~~~------------------~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~  293 (299)
T d1jpaa_         243 INAIEQDYR------------------LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN  293 (299)
T ss_dssp             HHHHHTTCC------------------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHcCCC------------------CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence            111111000                  001123445688999999999999999999999999988764

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.9e-27  Score=159.01  Aligned_cols=126  Identities=25%  Similarity=0.384  Sum_probs=82.0

Q ss_pred             CceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            1 MVAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      +++||+|||+++.+...... .......||+.|+|||++.+..++.++||||||+++||++++..|+.........+. .
T Consensus       147 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~-~  225 (283)
T d1mqba_         147 LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK-A  225 (283)
T ss_dssp             CCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH-H
T ss_pred             CeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHH-H
Confidence            36899999999876433221 222345689999999999888899999999999999999997666543322221111 1


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      ......                  .+.+..++..+.+|+.+||+.||++|||+.++++.|+++.+.
T Consensus       226 i~~~~~------------------~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~  273 (283)
T d1mqba_         226 INDGFR------------------LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  273 (283)
T ss_dssp             HHTTCC------------------CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HhccCC------------------CCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence            111100                  001122345588999999999999999999999999988764

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.9e-27  Score=158.83  Aligned_cols=117  Identities=22%  Similarity=0.283  Sum_probs=85.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+|+.+.....  .....+||+.|+|||++.+..++.++||||+|+++|+|++|..||.......... ....
T Consensus       154 ~vkl~DFG~a~~~~~~~~--~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~-~~~~  230 (293)
T d1yhwa1         154 SVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIAT  230 (293)
T ss_dssp             CEEECCCTTCEECCSTTC--CBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHH
T ss_pred             cEeeccchhheeeccccc--cccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHH-HHHh
Confidence            589999999988643222  2345689999999999998889999999999999999999999997643322111 1111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...+.                 ...+...+..+.+|+.+||+.||.+|||++|+++|
T Consensus       231 ~~~~~-----------------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~H  270 (293)
T d1yhwa1         231 NGTPE-----------------LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH  270 (293)
T ss_dssp             HCSCC-----------------CSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred             CCCCC-----------------CCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            10000                 00012334568899999999999999999999987

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=4.1e-27  Score=156.58  Aligned_cols=113  Identities=18%  Similarity=0.204  Sum_probs=84.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+|+.....    ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.....  ......
T Consensus       144 ~~kl~DFG~a~~~~~~----~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~--~~~~i~  217 (263)
T d2j4za1         144 ELKIADFGWSVHAPSS----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE--TYKRIS  217 (263)
T ss_dssp             CEEECCCCSCSCCCCC----CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHHHH
T ss_pred             CEeecccceeeecCCC----cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHH--HHHHHH
Confidence            5899999999875322    2344679999999999999889999999999999999999999997643221  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      .....                   .+...++++.+|+.+||+.||++|||++|+++|=
T Consensus       218 ~~~~~-------------------~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp  256 (263)
T d2j4za1         218 RVEFT-------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHP  256 (263)
T ss_dssp             TTCCC-------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCH
T ss_pred             cCCCC-------------------CCccCCHHHHHHHHHHccCCHhHCcCHHHHHcCc
Confidence            10000                   0112344588999999999999999999999874

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=2.1e-27  Score=161.22  Aligned_cols=117  Identities=16%  Similarity=0.184  Sum_probs=73.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+|+.....   ......+||+.|+|||++.+..|+.++||||+||++|+|++|..||.+......  .....
T Consensus       148 ~vkl~DFG~a~~~~~~---~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~--~~~i~  222 (307)
T d1a06a_         148 KIMISDFGLSKMEDPG---SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKL--FEQIL  222 (307)
T ss_dssp             CEEECCC---------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHH
T ss_pred             eEEEeccceeEEccCC---CeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHH--HHHHh
Confidence            5899999999875322   123446799999999999988899999999999999999999999976433211  11111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ....               ....+.....++.+.+|+.+||+.||++|||++|+++|
T Consensus       223 ~~~~---------------~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  264 (307)
T d1a06a_         223 KAEY---------------EFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH  264 (307)
T ss_dssp             TTCC---------------CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred             ccCC---------------CCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            1000               00000112334568999999999999999999999997

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=5.3e-27  Score=156.89  Aligned_cols=125  Identities=22%  Similarity=0.337  Sum_probs=88.4

Q ss_pred             CceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      ..+||+|||+|+.+... .........||+.|+|||++.+..++.++||||||+++||++++..|+.........+. ..
T Consensus       146 ~~~Kl~DFGla~~~~~~-~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~-~i  223 (272)
T d1qpca_         146 LSCKIADFGLARLIEDN-EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ-NL  223 (272)
T ss_dssp             SCEEECCCTTCEECSSS-CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH-HH
T ss_pred             cceeeccccceEEccCC-ccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHH-HH
Confidence            36899999999986432 22223446788999999999888899999999999999999996655433222211111 11


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      ......                  ..+..++..+.+|+.+||+.||++|||++++++.|+.+.++
T Consensus       224 ~~~~~~------------------~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         224 ERGYRM------------------VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             HTTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HhcCCC------------------CCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence            111000                  00122345588999999999999999999999999988764

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2e-27  Score=158.67  Aligned_cols=115  Identities=18%  Similarity=0.188  Sum_probs=80.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+|+.+....  .......||+.|+|||++.+..|+.++||||+|+++|+|++|+.||.......  +.....
T Consensus       152 ~vkl~DFG~a~~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~--~~~~i~  227 (269)
T d2java1         152 NVKLGDFGLARILNHDT--SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE--LAGKIR  227 (269)
T ss_dssp             CEEECCHHHHHHC-------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHH
T ss_pred             cEEEeeccceeecccCC--CccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHH--HHHHHH
Confidence            58999999998864322  22345789999999999988889999999999999999999999997643321  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ......                  .+...++++.+|+.+||+.||.+|||++|+++|
T Consensus       228 ~~~~~~------------------~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~h  266 (269)
T d2java1         228 EGKFRR------------------IPYRYSDELNEIITRMLNLKDYHRPSVEEILEN  266 (269)
T ss_dssp             HTCCCC------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             cCCCCC------------------CCcccCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence            110000                  011233458899999999999999999999876

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=3.4e-27  Score=159.97  Aligned_cols=123  Identities=24%  Similarity=0.374  Sum_probs=87.1

Q ss_pred             CceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcC-CCCccccccccchhHH
Q 043981            1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGK-KPTDEIFNEEMTLKHW   79 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~-~p~~~~~~~~~~~~~~   79 (161)
                      +++||+|||+|+.+.............|++.|+|||++.+..++.++||||||+++||++++. .||.......  ....
T Consensus       177 ~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e--~~~~  254 (301)
T d1lufa_         177 MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE--VIYY  254 (301)
T ss_dssp             GCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHHH
T ss_pred             CcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHH--HHHH
Confidence            368999999998764433333344567889999999999888999999999999999999986 5665533321  1111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIR  143 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~  143 (161)
                      .......                  ..+..++.++.+|+.+||+.||++||||.+|++.|+++.
T Consensus       255 v~~~~~~------------------~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         255 VRDGNIL------------------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             HHTTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHcCCCC------------------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            1111100                  001223345889999999999999999999999999874

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.5e-27  Score=156.55  Aligned_cols=119  Identities=19%  Similarity=0.415  Sum_probs=87.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+..... .......||..|+|||++.+..++.++||||||+++||+++ |+.||.......  +....
T Consensus       138 ~~kl~DfG~a~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~--~~~~i  214 (258)
T d1k2pa_         138 VVKVSDFGLSRYVLDDEY-TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE--TAEHI  214 (258)
T ss_dssp             CEEECCCSSCCBCSSSSC-CCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--HHHHH
T ss_pred             cEEECcchhheeccCCCc-eeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHH--HHHHH
Confidence            689999999987643322 22334678999999999988889999999999999999998 789987654322  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLK  141 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~  141 (161)
                      ....+.                  ..+...++++.+|+.+||+.||++|||+++++.||..
T Consensus       215 ~~~~~~------------------~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         215 AQGLRL------------------YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             HTTCCC------------------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             HhCCCC------------------CCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            111000                  0012233468899999999999999999999999864

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.5e-26  Score=156.82  Aligned_cols=144  Identities=15%  Similarity=0.157  Sum_probs=89.5

Q ss_pred             CceeeecccccccccCCCCc--cccccccccccccCCCCCCCCC------CCCCccchhhhHHHHHHHhcCCCCcccccc
Q 043981            1 MVAHLSDFSIAKLLTGEDQS--MTQTQTLATIGYMAPEYGREGR------VSANGDVYSFGIMLMETFTGKKPTDEIFNE   72 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~--~~~~~~~g~~~~~~Pe~~~~~~------~~~~~dv~s~g~il~e~~~g~~p~~~~~~~   72 (161)
                      +.+||+|||+++........  .......||+.|+|||++.+..      ++.++||||||+++||+++|..|+......
T Consensus       145 ~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~  224 (303)
T d1vjya_         145 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY  224 (303)
T ss_dssp             SCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCC
T ss_pred             CCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCccccc
Confidence            36899999999887543222  2234567999999999876542      566799999999999999998887543322


Q ss_pred             ccchhHHhhhhcCCCCccc---cccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           73 EMTLKHWVNDWLPISTMEV---VDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      ..........  .......   .......+..............+.+|+.+||+.||++|||+.||+++|.++.++.
T Consensus       225 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~  299 (303)
T d1vjya_         225 QLPYYDLVPS--DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE  299 (303)
T ss_dssp             CCTTTTTSCS--SCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             ccchhhcccc--cchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHhc
Confidence            2111100000  0000000   0000000000011112345567899999999999999999999999999988764

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=3.1e-26  Score=157.14  Aligned_cols=122  Identities=20%  Similarity=0.192  Sum_probs=86.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      ++||+|||+|+......   .....+||+.|+|||++.+..|+.++||||+||++|++++|+.||.+........ ....
T Consensus       152 ~~Kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~-~~~~  227 (335)
T d2ozaa1         152 ILKLTDFGFAKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP-GMKT  227 (335)
T ss_dssp             CEEECCCTTCEECCCCC---CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC---------
T ss_pred             cccccccceeeeccCCC---ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHH-HHHH
Confidence            58999999998764322   2344679999999999998889999999999999999999999997643221100 0000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                                  .........+.+.....++++.+|+.+||+.||++|||+.+++.|=
T Consensus       228 ------------~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp  273 (335)
T d2ozaa1         228 ------------RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP  273 (335)
T ss_dssp             ------------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSH
T ss_pred             ------------HHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCH
Confidence                        0000111111122344566799999999999999999999999873

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.5e-27  Score=160.23  Aligned_cols=133  Identities=17%  Similarity=0.238  Sum_probs=83.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh-
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV-   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~-   80 (161)
                      .+||+|||+|+.+...    .....+||+.|+|||++.+..|+.++||||+||+++||++|+.||.............. 
T Consensus       143 ~vkl~DFGla~~~~~~----~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~  218 (322)
T d1s9ja_         143 EIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQ  218 (322)
T ss_dssp             CEEECCCCCCHHHHHH----TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC---
T ss_pred             CEEEeeCCCccccCCC----ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence            5899999999876321    22446899999999999998999999999999999999999999976443321111000 


Q ss_pred             -hhhcCCCC---c---cc---ccccc-ccchhh-----------hhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 -NDWLPIST---M---EV---VDVNL-LSQEDI-----------HFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 -~~~~~~~~---~---~~---~~~~~-~~~~~~-----------~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                       ........   .   ..   ..... ......           +.......+.++.+|+.+||++||.+|||++|+++|
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H  298 (322)
T d1s9ja_         219 VEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH  298 (322)
T ss_dssp             ---------------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence             00000000   0   00   00000 000000           000001124568999999999999999999999998

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=8e-27  Score=156.32  Aligned_cols=125  Identities=23%  Similarity=0.358  Sum_probs=88.8

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++.+...... .......||+.|+|||++.+..++.++||||||+++||+++ |+.||.+.....  +...
T Consensus       145 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~--~~~~  222 (277)
T d1xbba_         145 YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VTAM  222 (277)
T ss_dssp             EEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHH
T ss_pred             cccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHH--HHHH
Confidence            5899999999876543222 22234578999999999988889999999999999999997 899997643321  1111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      .....+.                  ..+..++.++.+|+.+||+.||++|||+++++..|+....+.
T Consensus       223 i~~~~~~------------------~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~  271 (277)
T d1xbba_         223 LEKGERM------------------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV  271 (277)
T ss_dssp             HHTTCCC------------------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             HHcCCCC------------------CCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhhc
Confidence            1111100                  001233456889999999999999999999999888876543

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.4e-26  Score=154.52  Aligned_cols=129  Identities=19%  Similarity=0.319  Sum_probs=90.2

Q ss_pred             CceeeecccccccccCCCCc--cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            1 MVAHLSDFSIAKLLTGEDQS--MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~--~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      +.+||+|||+++........  .......||..|++||++....++.++||||||+++||++++..||........... 
T Consensus       167 ~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~-  245 (311)
T d1r0pa_         167 FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV-  245 (311)
T ss_dssp             CCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHH-
T ss_pred             CCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHH-
Confidence            36899999999886533221  122335689999999999888899999999999999999998888755333222111 


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhh
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR  148 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~  148 (161)
                      ........                  ..+..++..+.+|+.+||+.||++|||+.||+++|+++.++...
T Consensus       246 ~i~~g~~~------------------~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~~  297 (311)
T d1r0pa_         246 YLLQGRRL------------------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG  297 (311)
T ss_dssp             HHHTTCCC------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred             HHHcCCCC------------------CCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhhh
Confidence            11111100                  00122334588999999999999999999999999999875433

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=2.6e-26  Score=154.56  Aligned_cols=123  Identities=22%  Similarity=0.309  Sum_probs=87.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+|+....... .......|++.|+|||++.+..++.++||||||+++||++++..|+........ +.....
T Consensus       153 ~~Kl~DFG~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~-~~~~i~  230 (287)
T d1opja_         153 LVKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYELLE  230 (287)
T ss_dssp             CEEECCCCCTTTCCSSSS-EEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-HHHHHH
T ss_pred             cEEEccccceeecCCCCc-eeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHH-HHHHHh
Confidence            689999999987643222 223345688899999999888899999999999999999997776543322211 111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                      ....                  ...+..++..+.+|+.+||+.||++|||++++++.|+.+.+
T Consensus       231 ~~~~------------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~  275 (287)
T d1opja_         231 KDYR------------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  275 (287)
T ss_dssp             TTCC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred             cCCC------------------CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            1100                  00012334568899999999999999999999999988754

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.91  E-value=1.7e-26  Score=159.14  Aligned_cols=117  Identities=17%  Similarity=0.167  Sum_probs=85.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+|+.+...   .......||+.|+|||++.+..++.++||||+||++|+|++|..||.+...... +... .
T Consensus       164 ~vkL~DFG~a~~~~~~---~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~-~~~i-~  238 (350)
T d1koaa2         164 ELKLIDFGLTAHLDPK---QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET-LRNV-K  238 (350)
T ss_dssp             CEEECCCTTCEECCTT---SCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHH-H
T ss_pred             eEEEeecchheecccc---cccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHH-HHHH-H
Confidence            4899999999886432   223456899999999999988899999999999999999999999975433211 1111 1


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ..... .              ........++.+.+|+.+||+.||++|||++|+++|
T Consensus       239 ~~~~~-~--------------~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h  280 (350)
T d1koaa2         239 SCDWN-M--------------DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH  280 (350)
T ss_dssp             HTCCC-S--------------CCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred             hCCCC-C--------------CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            10000 0              000012234558899999999999999999999987

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=8.9e-27  Score=156.77  Aligned_cols=118  Identities=18%  Similarity=0.220  Sum_probs=81.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+|+.+............+||+.|+|||++.+..++.++||||+||++|+|++|..||.......  +.....
T Consensus       146 ~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~--~~~~i~  223 (288)
T d1uu3a_         146 HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL--IFQKII  223 (288)
T ss_dssp             CEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH
T ss_pred             eEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHH--HHHHHH
Confidence            589999999998754333333455689999999999998889999999999999999999999997643221  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLL  140 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~  140 (161)
                      ....       .        .    +...++.+.+|+.+||+.||.+|||++|++.+-.
T Consensus       224 ~~~~-------~--------~----p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~  263 (288)
T d1uu3a_         224 KLEY-------D--------F----PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGP  263 (288)
T ss_dssp             TTCC-------C--------C----CTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHH
T ss_pred             cCCC-------C--------C----CccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHH
Confidence            0000       0        0    1122345889999999999999999999866543

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.9e-26  Score=155.21  Aligned_cols=117  Identities=20%  Similarity=0.251  Sum_probs=82.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCC-----CCCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR-----EGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~-----~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||+|+.....  ........||+.|+|||++.     ...|+.++||||+||++|+|++|+.||........ +
T Consensus       148 ~~Kl~DFG~a~~~~~~--~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~-~  224 (288)
T d2jfla1         148 DIKLADFGVSAKNTRT--IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV-L  224 (288)
T ss_dssp             CEEECCCTTCEECHHH--HHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH-H
T ss_pred             CEEEEechhhhccCCC--cccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHH-H
Confidence            5799999999765321  11234567999999999874     34588999999999999999999999976543322 1


Q ss_pred             hHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           77 KHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...... .+...                ..+...+.++.+|+.+||+.||.+|||++|+++|
T Consensus       225 ~~i~~~-~~~~~----------------~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h  269 (288)
T d2jfla1         225 LKIAKS-EPPTL----------------AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH  269 (288)
T ss_dssp             HHHHHS-CCCCC----------------SSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred             HHHHcC-CCCCC----------------CccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            111111 00000                0012334568899999999999999999999987

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.7e-25  Score=152.11  Aligned_cols=126  Identities=18%  Similarity=0.290  Sum_probs=90.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++...............||+.|+|||++.+..++.++||||||+++|||+++..|+.........+.....
T Consensus       183 ~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~  262 (311)
T d1t46a_         183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK  262 (311)
T ss_dssp             EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHH
T ss_pred             cccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Confidence            57999999999875444444445578999999999998888999999999999999999955444333332222222222


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      ...+..                  .+...+..+.+|+.+||++||.+|||+.++++.|+++.++
T Consensus       263 ~~~~~~------------------~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~  308 (311)
T d1t46a_         263 EGFRML------------------SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (311)
T ss_dssp             HTCCCC------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cCCCCC------------------CcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence            211110                  0112334588999999999999999999999999887654

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=7e-26  Score=152.93  Aligned_cols=117  Identities=15%  Similarity=0.202  Sum_probs=84.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+|+......   ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.+...... +. ...
T Consensus       155 ~vkl~DfG~a~~~~~~~---~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~-~~-~i~  229 (293)
T d1jksa_         155 RIKIIDFGLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LA-NVS  229 (293)
T ss_dssp             CEEECCCTTCEECTTSC---BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HH-HHH
T ss_pred             ceEecchhhhhhcCCCc---cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHH-HH-HHH
Confidence            48999999998764322   23446789999999999988899999999999999999999999976433221 11 000


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ...               ...........+..+.+|+.+||+.||.+|||++|+++|
T Consensus       230 ~~~---------------~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h  271 (293)
T d1jksa_         230 AVN---------------YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH  271 (293)
T ss_dssp             TTC---------------CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             hcC---------------CCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            000               000011122344568899999999999999999999986

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.1e-25  Score=152.88  Aligned_cols=124  Identities=21%  Similarity=0.259  Sum_probs=86.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCC-CCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK-PTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~-p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.....   .......||..|++||.+.+..++.++||||||+++|||++|.. ||......  .+....
T Consensus       165 ~~kl~DfG~a~~~~~~---~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~--~~~~~i  239 (309)
T d1fvra_         165 VAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKL  239 (309)
T ss_dssp             CEEECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHG
T ss_pred             ceEEcccccccccccc---ccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHH--HHHHHH
Confidence            5799999999865321   12234568999999999988889999999999999999999764 56543221  111111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhhh
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLLR  148 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~~  148 (161)
                      .....                  ...+..+++++.+|+.+||+.||++|||+++++++|+++.++...
T Consensus       240 ~~~~~------------------~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~~~  289 (309)
T d1fvra_         240 PQGYR------------------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT  289 (309)
T ss_dssp             GGTCC------------------CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSC
T ss_pred             HhcCC------------------CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCcC
Confidence            11100                  000122345689999999999999999999999999999875543

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=9e-26  Score=153.20  Aligned_cols=112  Identities=22%  Similarity=0.321  Sum_probs=80.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC---CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE---GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKH   78 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~---~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~   78 (161)
                      .+||+|||+|+....      .....||+.|+|||++.+   ..|+.++||||+||++|++++|..||........ +..
T Consensus       153 ~~Kl~DFG~a~~~~~------~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~-~~~  225 (309)
T d1u5ra_         153 LVKLGDFGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYH  225 (309)
T ss_dssp             EEEECCCTTCBSSSS------BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHH
T ss_pred             CEEEeecccccccCC------CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHH-HHH
Confidence            589999999986532      234679999999998754   3489999999999999999999999976433221 111


Q ss_pred             HhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           79 WVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ......+..                  .....++.+.+|+.+||+.||.+|||++++++|
T Consensus       226 i~~~~~~~~------------------~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~H  267 (309)
T d1u5ra_         226 IAQNESPAL------------------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (309)
T ss_dssp             HHHSCCCCC------------------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             HHhCCCCCC------------------CCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhC
Confidence            111100000                  011223458899999999999999999999886

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=3.4e-26  Score=152.98  Aligned_cols=122  Identities=23%  Similarity=0.394  Sum_probs=84.9

Q ss_pred             ceeeecccccccccCCCCcc-ccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~-~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++.+....... ......|+..|+|||++.+..++.++||||||+++||+++ |..||.+...... +...
T Consensus       149 ~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~-~~~i  227 (273)
T d1u46a_         149 LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI-LHKI  227 (273)
T ss_dssp             EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH-HHHH
T ss_pred             ceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHH-HHHH
Confidence            68999999999875443322 2234567889999999988889999999999999999998 8999975433221 1111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHh
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKI  142 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~  142 (161)
                      ......                  .+.+...+..+.+|+.+||+.||++|||+.++++.|.++
T Consensus       228 ~~~~~~------------------~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         228 DKEGER------------------LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             HTSCCC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HhCCCC------------------CCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            110000                  000122334588999999999999999999999888775

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.1e-25  Score=149.54  Aligned_cols=119  Identities=28%  Similarity=0.410  Sum_probs=81.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      ++||+|||+++....     ......++..|+|||++.+..++.++||||||+++||+++ |..||.......  +....
T Consensus       141 ~~kl~dfg~s~~~~~-----~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~--~~~~i  213 (262)
T d1byga_         141 VAKVSDFGLTKEASS-----TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRV  213 (262)
T ss_dssp             CEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--HHHHH
T ss_pred             CEeecccccceecCC-----CCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHH--HHHHH
Confidence            579999999987532     1233567889999999988889999999999999999998 677776543321  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      .....                  ...+...++++.+|+.+||+.||.+|||+.+++++|+.+.+.
T Consensus       214 ~~~~~------------------~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~~  260 (262)
T d1byga_         214 EKGYK------------------MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  260 (262)
T ss_dssp             TTTCC------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HcCCC------------------CCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHhC
Confidence            11000                  000122335588999999999999999999999999998765

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.5e-25  Score=150.22  Aligned_cols=133  Identities=21%  Similarity=0.229  Sum_probs=85.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++....   ........||+.|+|||++.+..|+.++||||+||+++||++|+.||.+...... +.....
T Consensus       154 ~~kl~dfg~~~~~~~---~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-~~~i~~  229 (305)
T d1blxa_         154 QIKLADFGLARIYSF---QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ-LGKILD  229 (305)
T ss_dssp             CEEECSCCSCCCCCG---GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHH
T ss_pred             Ceeecchhhhhhhcc---cccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHH-HHHHHH
Confidence            579999999876432   2233557899999999999999999999999999999999999999976543221 111111


Q ss_pred             hh-cC--CCCcccc---ccccccc-hhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DW-LP--ISTMEVV---DVNLLSQ-EDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~-~~--~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .. .+  .......   ....... ...........++.+.+|+.+||++||++|||++|+++|
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H  293 (305)
T d1blxa_         230 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH  293 (305)
T ss_dssp             HHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence            00 00  0000000   0000000 000000112234568899999999999999999999987

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.1e-25  Score=151.23  Aligned_cols=126  Identities=23%  Similarity=0.315  Sum_probs=83.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      ++||+|||+++....... .......||+.|+|||++....++.++||||||+++||+++|..|+.........+.....
T Consensus       151 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~  229 (285)
T d1fmka3         151 VCKVADFGLARLIEDNEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER  229 (285)
T ss_dssp             CEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT
T ss_pred             cEEEcccchhhhccCCCc-eeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Confidence            689999999987643222 2233457899999999998888999999999999999999976665443332222221111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHhh
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSLL  147 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~~  147 (161)
                      . ..                  .+.+..+++++.+|+.+||+.||++|||+++|+..|+....+..
T Consensus       230 ~-~~------------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~  276 (285)
T d1fmka3         230 G-YR------------------MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE  276 (285)
T ss_dssp             T-CC------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred             c-CC------------------CCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCC
Confidence            1 00                  00112334568899999999999999999999999888775543

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=2e-25  Score=151.57  Aligned_cols=124  Identities=23%  Similarity=0.411  Sum_probs=89.1

Q ss_pred             CceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcC-CCCccccccccchhHH
Q 043981            1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGK-KPTDEIFNEEMTLKHW   79 (161)
Q Consensus         1 ~~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~-~p~~~~~~~~~~~~~~   79 (161)
                      .++||+|||+++.+.............||+.|++||.+.+..++.++||||||+++||++++. .||....... .+...
T Consensus       170 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~-~~~~i  248 (308)
T d1p4oa_         170 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-VLRFV  248 (308)
T ss_dssp             CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH-HHHHH
T ss_pred             ceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHH-HHHHH
Confidence            368999999998765433333344567899999999998888999999999999999999975 6665432221 11111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                      .....                   ...+..++..+.+|+.+||+.+|++|||+.+++++|++..+
T Consensus       249 ~~~~~-------------------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         249 MEGGL-------------------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             HTTCC-------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HhCCC-------------------CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            11000                   00012234558999999999999999999999999987654

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.90  E-value=7.7e-26  Score=155.98  Aligned_cols=117  Identities=18%  Similarity=0.184  Sum_probs=85.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+|+.+....   ......||+.|+|||++.+..++.++||||+||++|+|++|..||.+...... +.. ..
T Consensus       167 ~vkL~DFGla~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-~~~-i~  241 (352)
T d1koba_         167 SVKIIDFGLATKLNPDE---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET-LQN-VK  241 (352)
T ss_dssp             CEEECCCTTCEECCTTS---CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHH-HH
T ss_pred             eEEEeecccceecCCCC---ceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHH-HH
Confidence            58999999998874322   23446799999999999988899999999999999999999999976433221 111 11


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ..... .              +.......++++.+|+.+||+.||.+|||++|+++|
T Consensus       242 ~~~~~-~--------------~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H  283 (352)
T d1koba_         242 RCDWE-F--------------DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH  283 (352)
T ss_dssp             HCCCC-C--------------CSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred             hCCCC-C--------------CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            10000 0              000012234558899999999999999999999987

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.9e-25  Score=151.18  Aligned_cols=123  Identities=27%  Similarity=0.394  Sum_probs=90.0

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHh-cCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~-g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++...............|++.|+|||++.+..|+.++||||||+++||+++ |..||.......  +....
T Consensus       173 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~--~~~~i  250 (299)
T d1fgka_         173 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--LFKLL  250 (299)
T ss_dssp             CEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHHH
T ss_pred             CeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHH--HHHHH
Confidence            579999999987754433333345678999999999988889999999999999999998 678876533321  11111


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRD  144 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~  144 (161)
                      .......                  .+...+..+.+|+.+||+.||.+|||+.||++.|+++..
T Consensus       251 ~~~~~~~------------------~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a  296 (299)
T d1fgka_         251 KEGHRMD------------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  296 (299)
T ss_dssp             HTTCCCC------------------CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HcCCCCC------------------CCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence            1111000                  011223458899999999999999999999999998865

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.90  E-value=4e-25  Score=153.04  Aligned_cols=115  Identities=19%  Similarity=0.265  Sum_probs=82.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+|+.+...    .....+||+.|+|||++.. ..|+.++||||+||++|+|++|+.||..........  ..
T Consensus       145 ~iKl~DFGla~~~~~~----~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~--~~  218 (364)
T d1omwa3         145 HVRISDLGLACDFSKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--ID  218 (364)
T ss_dssp             CEEECCCTTCEECSSS----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHH--HH
T ss_pred             cEEEeeeceeeecCCC----cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHH--HH
Confidence            5899999999876432    2344679999999999864 568999999999999999999999997644332211  11


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCC-----HHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRIN-----AKEIVTK  138 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~vl~~  138 (161)
                      ........            .    .+...++++.+|+.+||+.||.+|||     ++++++|
T Consensus       219 ~~~~~~~~------------~----~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H  265 (364)
T d1omwa3         219 RMTLTMAV------------E----LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES  265 (364)
T ss_dssp             HHSSSCCC------------C----CCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred             HhcccCCC------------C----CCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence            11110000            0    01123345889999999999999999     6899887

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=6.2e-25  Score=148.65  Aligned_cols=133  Identities=18%  Similarity=0.167  Sum_probs=84.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+|+.......  .....+||+.|+|||++... .|+.++||||+||++++|++|..||......... ....
T Consensus       138 ~~KL~DFG~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l-~~i~  214 (299)
T d1ua2a_         138 VLKLADFGLAKSFGSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQL-TRIF  214 (299)
T ss_dssp             CEEECCCGGGSTTTSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHHH
T ss_pred             ccccccCccccccCCCcc--cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHH-HHHH
Confidence            579999999987643222  23446799999999987654 5799999999999999999999999764432221 1111


Q ss_pred             hhh-cC--CCCccc------cccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDW-LP--ISTMEV------VDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~-~~--~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ... .+  ......      ............ ......++.+.+|+.+||++||++|||++|+++|
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H  280 (299)
T d1ua2a_         215 ETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLH-HIFSAAGDDLLDLIQGLFLFNPCARITATQALKM  280 (299)
T ss_dssp             HHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHH-HHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred             HhcCCCChhhccchhccchhhhhccCCCCChH-HhcccCCHHHHHHHHHHccCChhhCcCHHHHhCC
Confidence            110 00  000000      000000000000 0011234568999999999999999999999987

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.2e-24  Score=149.06  Aligned_cols=114  Identities=20%  Similarity=0.225  Sum_probs=84.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+|+......  ......+||+.|+|||++.+..|+.++|+||+||++|+|++|+.||.+.....  +.....
T Consensus       143 ~vkl~DFG~a~~~~~~~--~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~--~~~~i~  218 (337)
T d1o6la_         143 HIKITDFGLCKEGISDG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--LFELIL  218 (337)
T ss_dssp             CEEECCCTTCBCSCCTT--CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH
T ss_pred             CEEEeecccccccccCC--cccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHH--HHHHHh
Confidence            58999999998754322  23455789999999999999999999999999999999999999997644321  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCC-----HHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRIN-----AKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps-----~~~vl~~  138 (161)
                      .... ..                  +...++++.+|+.+||+.||.+|++     ++++++|
T Consensus       219 ~~~~-~~------------------p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H  261 (337)
T d1o6la_         219 MEEI-RF------------------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH  261 (337)
T ss_dssp             HCCC-CC------------------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred             cCCC-CC------------------CccCCHHHHHHHHhhccCCchhhcccccccHHHHHcC
Confidence            1000 00                  1123445889999999999999994     8889887

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.89  E-value=4.2e-24  Score=144.55  Aligned_cols=129  Identities=14%  Similarity=0.059  Sum_probs=89.4

Q ss_pred             ceeeecccccccccCCCCc-----cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccch
Q 043981            2 VAHLSDFSIAKLLTGEDQS-----MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTL   76 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-----~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~   76 (161)
                      .+||+|||+|+.+......     .......||+.|+|||++.+..++.++||||||++++|+++|+.||..........
T Consensus       144 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~  223 (299)
T d1ckia_         144 LVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQ  223 (299)
T ss_dssp             CEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC------
T ss_pred             eeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHH
Confidence            5899999999987533221     12244679999999999998889999999999999999999999997654332211


Q ss_pred             h--HHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHH
Q 043981           77 K--HWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDS  145 (161)
Q Consensus        77 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~  145 (161)
                      .  ........            ..   .......++.++.+|+..||..+|++||++.++.+.|+.+...
T Consensus       224 ~~~~~~~~~~~------------~~---~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         224 KYERISEKKMS------------TP---IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             -HHHHHHHHHH------------SC---HHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHhhcccCC------------CC---hhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHH
Confidence            1  00000000            00   0001123456689999999999999999999988888777543

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=1.4e-24  Score=149.57  Aligned_cols=111  Identities=16%  Similarity=0.108  Sum_probs=82.3

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      ++||+|||+|+.+...     .....||+.|+|||++.+..++.++||||+||++|+|++|..||.+.....  +.....
T Consensus       179 ~ikL~DFG~a~~~~~~-----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~--~~~~i~  251 (350)
T d1rdqe_         179 YIQVTDFGFAKRVKGR-----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ--IYEKIV  251 (350)
T ss_dssp             CEEECCCTTCEECSSC-----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH
T ss_pred             CEEeeeceeeeecccc-----cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHH--HHHHHh
Confidence            5899999999886422     234679999999999999889999999999999999999999997543211  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~  138 (161)
                      ..... .                  +...++.+.+|+.+||+.||.+|+     |++++++|
T Consensus       252 ~~~~~-~------------------p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~H  294 (350)
T d1rdqe_         252 SGKVR-F------------------PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH  294 (350)
T ss_dssp             HCCCC-C------------------CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred             cCCCC-C------------------CccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcC
Confidence            11000 0                  112234588999999999999995     89999986

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.9e-25  Score=147.85  Aligned_cols=106  Identities=25%  Similarity=0.277  Sum_probs=78.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCC-CCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRV-SANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~-~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+|+....    ...+...||+.|+|||++.+..+ +.++||||+||++|++++|+.||.....    ..   
T Consensus       149 ~vkl~DFG~a~~~~~----~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~----i~---  217 (273)
T d1xwsa_         149 ELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE----II---  217 (273)
T ss_dssp             EEEECCCTTCEECCS----SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH----HH---
T ss_pred             eEEECccccceeccc----ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH----Hh---
Confidence            579999999987532    12345679999999999876665 5668999999999999999999965211    00   


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      . .. ..          .        +...+.++.+|+.+||+.||++|||++|+++|
T Consensus       218 ~-~~-~~----------~--------~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h  255 (273)
T d1xwsa_         218 R-GQ-VF----------F--------RQRVSSECQHLIRWCLALRPSDRPTFEEIQNH  255 (273)
T ss_dssp             H-CC-CC----------C--------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred             h-cc-cC----------C--------CCCCCHHHHHHHHHHccCCHhHCcCHHHHhcC
Confidence            0 00 00          0        01123458899999999999999999999987

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.88  E-value=3.1e-24  Score=146.03  Aligned_cols=111  Identities=19%  Similarity=0.207  Sum_probs=82.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+|+....     .....+||+.|+|||++.+..|+.++||||+|+++|+|++|+.||........  .....
T Consensus       142 ~vkL~DFG~a~~~~~-----~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~--~~~i~  214 (316)
T d1fota_         142 HIKITDFGFAKYVPD-----VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT--YEKIL  214 (316)
T ss_dssp             CEEECCCSSCEECSS-----CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHHH
T ss_pred             CEEEecCccceEecc-----ccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHH--HHHHH
Confidence            589999999987632     12346899999999999988899999999999999999999999976432211  11111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~  138 (161)
                      .... .              .    +...++.+.+++.+||+.||.+|+     |++++++|
T Consensus       215 ~~~~-~--------------~----p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H  257 (316)
T d1fota_         215 NAEL-R--------------F----PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH  257 (316)
T ss_dssp             HCCC-C--------------C----CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred             cCCC-C--------------C----CCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcC
Confidence            0000 0              0    112234588999999999999996     89999987

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.88  E-value=3.7e-24  Score=143.37  Aligned_cols=125  Identities=25%  Similarity=0.394  Sum_probs=80.8

Q ss_pred             ceeeecccccccccCCCC-ccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQ-SMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~-~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .++|+|||.++....... .......+||+.|+|||++.+..++.++||||+|+++|+|++|..||........... ..
T Consensus       149 ~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~-~~  227 (277)
T d1o6ya_         149 AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ-HV  227 (277)
T ss_dssp             CEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-HH
T ss_pred             cceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHH-HH
Confidence            468999999876533221 2233456799999999999888899999999999999999999999976433221111 11


Q ss_pred             hhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-CHHHHHHHHHHhH
Q 043981           81 NDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-NAKEIVTKLLKIR  143 (161)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-s~~~vl~~l~~~~  143 (161)
                      ... +.               .........++.+.+|+.+||+.||.+|| |++++++.|.++.
T Consensus       228 ~~~-~~---------------~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         228 RED-PI---------------PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             HCC-CC---------------CGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             hcC-CC---------------CCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence            100 00               00001123345688999999999999999 8999999888765

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.6e-23  Score=141.69  Aligned_cols=138  Identities=17%  Similarity=0.152  Sum_probs=84.6

Q ss_pred             ceeeecccccccccCCCCc--cccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccc-hh
Q 043981            2 VAHLSDFSIAKLLTGEDQS--MTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMT-LK   77 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~--~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~-~~   77 (161)
                      .+||+|||+++.+......  ......+||+.|+|||++.+. .++.++||||+|++++++++|+.||.+....... ..
T Consensus       155 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i  234 (318)
T d3blha1         155 VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI  234 (318)
T ss_dssp             CEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             cEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHH
Confidence            5899999999876432221  222345799999999998765 5899999999999999999999999764432211 11


Q ss_pred             HHhhhhcC-CCCccc--------cccccccch-hhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           78 HWVNDWLP-ISTMEV--------VDVNLLSQE-DIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        78 ~~~~~~~~-~~~~~~--------~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ........ ......        ......... ...........+.+++|+.+||++||++|||++|++.|=
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hp  306 (318)
T d3blha1         235 SQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD  306 (318)
T ss_dssp             HHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred             HHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcCh
Confidence            11111111 100000        000000000 000001122245678999999999999999999999874

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.8e-24  Score=146.52  Aligned_cols=114  Identities=25%  Similarity=0.291  Sum_probs=83.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++......  .......||+.|+|||++.+..++.++||||+||++|+|++|+.||.+.....  +.....
T Consensus       141 ~~kl~DFG~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~--~~~~i~  216 (320)
T d1xjda_         141 HIKIADFGMCKENMLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE--LFHSIR  216 (320)
T ss_dssp             CEEECCCTTCBCCCCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHH
T ss_pred             ceeccccchhhhccccc--ccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHH--HHHHHH
Confidence            57999999998754322  23344679999999999999999999999999999999999999997643322  111111


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHH-HHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAK-EIVTK  138 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~-~vl~~  138 (161)
                      ...+. .                  +...++.+.+|+.+||+.||.+|||+. ++++|
T Consensus       217 ~~~~~-~------------------p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~h  255 (320)
T d1xjda_         217 MDNPF-Y------------------PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQH  255 (320)
T ss_dssp             HCCCC-C------------------CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred             cCCCC-C------------------CccCCHHHHHHHHHhcccCCCCCcCHHHHHHhC
Confidence            11000 0                  112234588999999999999999985 77764

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.9e-24  Score=145.85  Aligned_cols=118  Identities=17%  Similarity=0.179  Sum_probs=85.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHhh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWVN   81 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~~   81 (161)
                      .+||+|||+++.....   .......|++.|++||...+..++.++||||+||++|+|++|..||........  .....
T Consensus       142 ~ikl~DFG~~~~~~~~---~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~--~~~i~  216 (321)
T d1tkia_         142 TIKIIEFGQARQLKPG---DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI--IENIM  216 (321)
T ss_dssp             CEEECCCTTCEECCTT---CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--HHHHH
T ss_pred             EEEEcccchhhccccC---CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHH--HHHHH
Confidence            5899999999876432   223446789999999999888899999999999999999999999976433211  11010


Q ss_pred             hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           82 DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                      ...               ...........+.++.+|+.+||+.||.+|||++|+++|=
T Consensus       217 ~~~---------------~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp  259 (321)
T d1tkia_         217 NAE---------------YTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP  259 (321)
T ss_dssp             HTC---------------CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred             hCC---------------CCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence            000               0000011122345688999999999999999999999873

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.87  E-value=6.1e-24  Score=142.15  Aligned_cols=117  Identities=20%  Similarity=0.209  Sum_probs=82.6

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC------CCCCCCccchhhhHHHHHHHhcCCCCccccccccc
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE------GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMT   75 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~------~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~   75 (161)
                      .+||+|||+++.+....   ......||..|++||++.+      ..++.++||||+|+++++|++|+.||.+...... 
T Consensus       148 ~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~-  223 (277)
T d1phka_         148 NIKLTDFGFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM-  223 (277)
T ss_dssp             CEEECCCTTCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-
T ss_pred             CeEEccchheeEccCCC---ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHH-
Confidence            57999999998864322   2344679999999998742      3478889999999999999999999976543221 


Q ss_pred             hhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           76 LKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ... ......               ....+.....++++.+|+.+||+.||.+|||++|+++|
T Consensus       224 ~~~-i~~~~~---------------~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h  270 (277)
T d1phka_         224 LRM-IMSGNY---------------QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH  270 (277)
T ss_dssp             HHH-HHHTCC---------------CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             HHH-HHhCCC---------------CCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence            111 110000               00001122344568999999999999999999999887

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.7e-23  Score=139.78  Aligned_cols=134  Identities=19%  Similarity=0.152  Sum_probs=84.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+|+.....  ........||+.|+|||++.... ++.++|+||+|++++++++|+.||..............
T Consensus       140 ~~kl~DFG~a~~~~~~--~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~  217 (298)
T d1gz8a_         140 AIKLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR  217 (298)
T ss_dssp             CEEECSTTHHHHHCCC--SBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             cceeccCCcceeccCC--cccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHH
Confidence            5799999999876432  22334567999999999876665 57889999999999999999999976443222111111


Q ss_pred             hhhcCC--CCccccc---cc----cccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLPI--STMEVVD---VN----LLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~~--~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ....+.  .......   ..    ........ ......+..+.+|+.+||++||.+|||++|+++|
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         218 TLGTPDEVVWPGVTSMPDYKPSFPKWARQDFS-KVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH  283 (298)
T ss_dssp             HHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHH-HHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             hcCCCchhhccccccccccccccccccccchh-hhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence            111110  0000000   00    00000000 0011234568999999999999999999999987

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=5.9e-23  Score=141.61  Aligned_cols=131  Identities=20%  Similarity=0.162  Sum_probs=84.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+++.+....   .....+|+..|++||++.+ ..++.++||||+||+++|+++|..||........ +....
T Consensus       161 ~~kl~DFG~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~-l~~i~  236 (350)
T d1q5ka_         161 VLKLCDFGSAKQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ-LVEII  236 (350)
T ss_dssp             CEEECCCTTCEECCTTS---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHH-HHHHH
T ss_pred             ceeEecccchhhccCCc---ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHH-HHHHH
Confidence            57999999998764322   2344679999999998765 4589999999999999999999999976443221 11111


Q ss_pred             h-----------hhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 N-----------DWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .           ...+....... .. ..............++.+.+|+.+||.+||++|||+.|+++|
T Consensus       237 ~~~g~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H  303 (350)
T d1q5ka_         237 KVLGTPTREQIREMNPNYTEFKF-PQ-IKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH  303 (350)
T ss_dssp             HHHCCCCHHHHHHHCC---CCCC-CC-CCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHhCCChHHhhhhhccchhhccc-cc-cccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            0           00000000000 00 000000111112344568999999999999999999999987

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.85  E-value=2.3e-22  Score=135.58  Aligned_cols=131  Identities=11%  Similarity=0.047  Sum_probs=90.7

Q ss_pred             ceeeecccccccccCCCCc-----cccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccc-
Q 043981            2 VAHLSDFSIAKLLTGEDQS-----MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMT-   75 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-----~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~-   75 (161)
                      .+||+|||+|+.+......     ......+||+.|+|||++.+..++.++||||+|++++++++|+.||.+....... 
T Consensus       144 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~  223 (293)
T d1csna_         144 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ  223 (293)
T ss_dssp             CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH
T ss_pred             ceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHH
Confidence            4799999999986432211     1233467999999999999888999999999999999999999999764332211 


Q ss_pred             hhHHhhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHHHHhHHHh
Q 043981           76 LKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKLLKIRDSL  146 (161)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l~~~~~~~  146 (161)
                      ..........           ...   .......+++++.+++..|+..+|++||+.+.+.+.|.++.++.
T Consensus       224 ~~~~i~~~~~-----------~~~---~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~  280 (293)
T d1csna_         224 KYERIGEKKQ-----------STP---LRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL  280 (293)
T ss_dssp             HHHHHHHHHH-----------HSC---HHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHhccC-----------CCC---hHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHc
Confidence            1100000000           000   00001234456899999999999999999998888888776544

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=4.5e-22  Score=137.40  Aligned_cols=135  Identities=18%  Similarity=0.064  Sum_probs=78.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHH--
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW--   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~--   79 (161)
                      .+|++|||+++.....   ......+||+.|+|||++.+..++.++||||+||+++++++|+.||.+...........  
T Consensus       157 ~~kl~df~~~~~~~~~---~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~  233 (355)
T d2b1pa1         157 TLKILDFGLARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ  233 (355)
T ss_dssp             CEEECCCCC------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             ceeeechhhhhccccc---cccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHh
Confidence            4799999998875422   23345679999999999998889999999999999999999999997543221110000  


Q ss_pred             -------------------hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHHH
Q 043981           80 -------------------VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTKL  139 (161)
Q Consensus        80 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~l  139 (161)
                                         ...............................+..+.+|+.+||.+||++||||+|+++|=
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hp  312 (355)
T d2b1pa1         234 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP  312 (355)
T ss_dssp             HCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred             ccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCc
Confidence                               000000000000000000000011112334567799999999999999999999999883

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.85  E-value=1e-22  Score=136.83  Aligned_cols=134  Identities=19%  Similarity=0.173  Sum_probs=80.2

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||.+.......  .......|++.|++||++.+.. ++.++||||+|++++|+++|+.||........ +....
T Consensus       138 ~~kl~DfG~a~~~~~~~--~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~-~~~i~  214 (286)
T d1ob3a_         138 ELKIADFGLARAFGIPV--RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ-LMRIF  214 (286)
T ss_dssp             CEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHH
T ss_pred             CEEecccccceecccCc--cccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHH-HHHHH
Confidence            57999999998764322  2234456899999999887554 68999999999999999999999976443221 11111


Q ss_pred             hhhcC---CCCcccccc-----ccccchhh-hhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLP---ISTMEVVDV-----NLLSQEDI-HFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~---~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .....   .........     ........ ........+..+.+|+.+||++||++|||++|+++|
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H  281 (286)
T d1ob3a_         215 RILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH  281 (286)
T ss_dssp             HHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            11100   000000000     00000000 000012234568899999999999999999999876

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.85  E-value=3.1e-22  Score=136.86  Aligned_cols=134  Identities=14%  Similarity=0.099  Sum_probs=84.7

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+|+......   .....++|+.|+|||++.+.. ++.++|+||+|++++++++|+.||..............
T Consensus       168 ~vkl~DFG~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~  244 (328)
T d3bqca1         168 KLRLIDWGLAEFYHPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA  244 (328)
T ss_dssp             EEEECCGGGCEECCTTC---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHH
T ss_pred             eeeecccccceeccCCC---cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHH
Confidence            47999999998764332   234567899999999977654 79999999999999999999999866443221111100


Q ss_pred             ------------hhhcCCCCccccc-----cccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 ------------NDWLPISTMEVVD-----VNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ------------~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                                  .............     .................++++++|+.+||++||.+|||++|+++|
T Consensus       245 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~H  319 (328)
T d3bqca1         245 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH  319 (328)
T ss_dssp             HHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             HHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence                        0000000000000     000000001111123345668999999999999999999999886

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.1e-22  Score=138.76  Aligned_cols=119  Identities=21%  Similarity=0.271  Sum_probs=81.9

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC--CCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR--VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~--~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++.+... .........|++.|++||.+.+..  ++.++||||+||++++|++|+.||.............
T Consensus       167 ~vkL~DFG~a~~~~~~-~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~  245 (322)
T d1vzoa_         167 HVVLTDFGLSKEFVAD-ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS  245 (322)
T ss_dssp             CEEESCSSEEEECCGG-GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHH
T ss_pred             CEEEeeccchhhhccc-ccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            5799999999876322 222234567999999999886543  6788999999999999999999997654332211111


Q ss_pred             hhhhcCCCCccccccccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCC-----CHHHHHHH
Q 043981           80 VNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRI-----NAKEIVTK  138 (161)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-----s~~~vl~~  138 (161)
                      .......                 ...+...+.++.+|+.+||++||++||     |++|+++|
T Consensus       246 ~~~~~~~-----------------~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H  292 (322)
T d1vzoa_         246 RRILKSE-----------------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  292 (322)
T ss_dssp             HHHHHCC-----------------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             HhcccCC-----------------CCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcC
Confidence            1110000                 000123445689999999999999999     47899886

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.7e-22  Score=138.01  Aligned_cols=137  Identities=16%  Similarity=0.139  Sum_probs=83.6

Q ss_pred             ceeeecccccccccCCCCc-cccccccccccccCCCCCCC-CCCCCCccchhhhHHHHHHHhcCCCCccccccccchhHH
Q 043981            2 VAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGRE-GRVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHW   79 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~-~~~~~~~g~~~~~~Pe~~~~-~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~   79 (161)
                      .+||+|||+++........ ......+||+.|+|||++.. ..++.++||||+|+++++|++|+.||.............
T Consensus       147 ~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~  226 (345)
T d1pmea_         147 DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL  226 (345)
T ss_dssp             CEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             CEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHh
Confidence            5799999999876432221 22345679999999999854 457888999999999999999999997644322111100


Q ss_pred             hhhhcCCCC-------cccc--ccccccchhhhh-hhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           80 VNDWLPIST-------MEVV--DVNLLSQEDIHF-VAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        80 ~~~~~~~~~-------~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .....+...       ....  ............ ......+..+.+|+.+||++||.+|||+.|+++|
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         227 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             HHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred             hhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            000000000       0000  000000000000 0011223468899999999999999999999988

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.7e-22  Score=139.06  Aligned_cols=135  Identities=21%  Similarity=0.225  Sum_probs=84.8

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCC-CCCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~-~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||+|+....     ......||+.|+|||++.+. .++.++||||+||+++++++|..||.+....... ....
T Consensus       159 ~~kl~Dfg~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~-~~~~  232 (346)
T d1cm8a_         159 ELKILDFGLARQADS-----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQL-KEIM  232 (346)
T ss_dssp             CEEECCCTTCEECCS-----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHHH
T ss_pred             ccccccccceeccCC-----ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHH-HHHH
Confidence            579999999987632     22446799999999998764 4789999999999999999999999765432211 1100


Q ss_pred             hhh--cCCCCccccc--------cc--cccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH--HHHhH
Q 043981           81 NDW--LPISTMEVVD--------VN--LLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK--LLKIR  143 (161)
Q Consensus        81 ~~~--~~~~~~~~~~--------~~--~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~--l~~~~  143 (161)
                      ...  ++........        ..  ........ ......++.+.+|+.+||.+||.+|||++|+++|  ++.+.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         233 KVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFA-SILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  308 (346)
T ss_dssp             HHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGG-GTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             hccCCCcHHHHhhhcchhhhhhhccCCcccccchH-HhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence            000  0000000000        00  00000000 0012234568899999999999999999999998  44443

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=4.8e-22  Score=133.83  Aligned_cols=135  Identities=16%  Similarity=0.104  Sum_probs=84.4

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+||+|||.++.......  ......++..|++||++.... ++.++||||+||++++|++|+.||.........+....
T Consensus       139 ~~kl~DFG~a~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~  216 (292)
T d1unla_         139 ELKLANFGLARAFGIPVR--CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIF  216 (292)
T ss_dssp             CEEECCCTTCEECCSCCS--CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHH
T ss_pred             ceeeeecchhhcccCCCc--cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHH
Confidence            579999999988643222  233356778899999887665 68899999999999999999999755443332222221


Q ss_pred             hhhcC---CCCcccccc------ccccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLP---ISTMEVVDV------NLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~---~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      .....   .........      ................++.+.+|+.+||++||.+||||+|+++|
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H  283 (292)
T d1unla_         217 RLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH  283 (292)
T ss_dssp             HHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             hhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence            11111   000000000      00000000000112334568899999999999999999999886

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=1.5e-21  Score=135.04  Aligned_cols=131  Identities=12%  Similarity=0.121  Sum_probs=82.5

Q ss_pred             eeeecccccccccCCCCccccccccccccccCCCCCCCCCCCCCccchhhhHHHHHHHhcCCCCccccccc-----cchh
Q 043981            3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNEE-----MTLK   77 (161)
Q Consensus         3 ~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~-----~~~~   77 (161)
                      +|++|||.++....     .....+||+.|+|||++....++.++|+||+|++++++++|+.||.......     ..+.
T Consensus       171 ~kl~dfg~s~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~  245 (362)
T d1q8ya_         171 IKIADLGNACWYDE-----HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA  245 (362)
T ss_dssp             EEECCCTTCEETTB-----CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred             eeEeeccccccccc-----ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHH
Confidence            78999999986532     2244679999999999988889999999999999999999999986532211     0111


Q ss_pred             HHhhhhcCC-------------------CCccccccccccc---hhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHH
Q 043981           78 HWVNDWLPI-------------------STMEVVDVNLLSQ---EDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI  135 (161)
Q Consensus        78 ~~~~~~~~~-------------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~v  135 (161)
                      .........                   .............   ...........+..+.+|+.+||++||.+|||++|+
T Consensus       246 ~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~  325 (362)
T d1q8ya_         246 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL  325 (362)
T ss_dssp             HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred             HHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHH
Confidence            100000000                   0000000000000   000111124567789999999999999999999999


Q ss_pred             HHH
Q 043981          136 VTK  138 (161)
Q Consensus       136 l~~  138 (161)
                      ++|
T Consensus       326 L~H  328 (362)
T d1q8ya_         326 VNH  328 (362)
T ss_dssp             HTC
T ss_pred             hcC
Confidence            987

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=2e-20  Score=128.75  Aligned_cols=131  Identities=18%  Similarity=0.129  Sum_probs=78.1

Q ss_pred             ceeeecccccccccCCCCccccccccccccccCCCCCCCCC-CCCCccchhhhHHHHHHHhcCCCCccccccccchhHHh
Q 043981            2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGR-VSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV   80 (161)
Q Consensus         2 ~~ki~DFG~a~~~~~~~~~~~~~~~~g~~~~~~Pe~~~~~~-~~~~~dv~s~g~il~e~~~g~~p~~~~~~~~~~~~~~~   80 (161)
                      .+|++|||++....     .......|+..|+|||+..+.. ++.++||||+|++++++++|+.||.+............
T Consensus       159 ~~kl~dfg~a~~~~-----~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~  233 (348)
T d2gfsa1         159 ELKILDFGLARHTD-----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR  233 (348)
T ss_dssp             CEEECCC----CCT-----GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             cccccccchhcccC-----cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            57999999987642     2234467899999999876654 68899999999999999999999976433211111000


Q ss_pred             hhhcCC------CCccc-cc--ccc--ccchhhhhhhhHHHHHHHHHHHHHhcccCcccCCCHHHHHHH
Q 043981           81 NDWLPI------STMEV-VD--VNL--LSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEIVTK  138 (161)
Q Consensus        81 ~~~~~~------~~~~~-~~--~~~--~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rps~~~vl~~  138 (161)
                      ....+.      ..... ..  ...  ....... ......++.+++|+.+||++||.+|||++|+++|
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H  301 (348)
T d2gfsa1         234 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  301 (348)
T ss_dssp             HHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHH-HHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             hcCCCChHHhhhccchhhhhhhhhcccCCCcchh-hhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcC
Confidence            000000      00000 00  000  0000000 0012234568899999999999999999999987