Citrus Sinensis ID: 044054

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400
MASSKTVRKLQVASPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGEITRTPLGEGEITQYPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPLQGPTFGIRGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLRKLGISKTKPEDLTPEEINRFARLDIDPASITWRRVMDVNDRFLRKITIGQGPEEKGMVRETGFDISVASEIMAVLALTTSLADTRERVGKMVIGNSKAGDPITADDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPGGIVVTEAGFGADIGAEKFMNIKCRYSG
cccccccccccccccccccHHHccccccccHHHHHHccccccccHHHcccccccccHHHHHHHcccccccEEEEEcccccccccccccccccccccccHHEEHHHHHHccccccEEEEEccccccccccccccccccccccEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccccccccccHHHHHHHHHHcccccccccccHHHHHcccccccccccCEEEEEcccccccccccEEccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHccEEEEEccccccccccccccHHHHHHHHHHccccccccccccccEEECccccccHcccccHHHHHHHHHHHcccccEEEccccccccccccccccccccccc
******V**LQVASPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGEITRTPLGEGEITQYPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPLQGPTFGIRGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLRKLGISKTKPEDLTPEEINRFARLDIDPASITWRRVMDVNDRFLRKITIGQGPEEKGMVRETGFDISVASEIMAVLALTTSLADTRERVGKMVIGNSKAGDPITADDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPGGIVVTEAGFGADIGAEKFMNIKCRYS*
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MASSKTVRKLQVASPVPADIDIANSVEPLHISEIAQELNLKPNHYDLYGKYKAKVLLSVLDELEGSADGYYVVVGEITRTPLGEGEITQYPLGEGKSTTTVGLCQALGAFLDKKVVTCLRQPLQGPTFGIRGGAAGGGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHEASQSDKALFNRLCPPNKEGERSFSNIMFRRLRKLGISKTKPEDLTPEEINRFARLDIDPASITWRRVMDVNDRFLRKITIGQGPEEKGMVRETGFDISVASEIMAVLALTTSLADTRERVGKMVIGNSKAGDPITADDLGVGGALTVLMKDAINPTLMQTLEGTPVLVHAGPFANIAHGNSSIVADKIALKLVGPGGIVVTEAGFGADIGAEKFMNIKCRYSG

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Formate--tetrahydrofolate ligase probableQ9SPK5
C-1-tetrahydrofolate synthase, cytoplasmic probableP11586
Formate--tetrahydrofolate ligase probableP28723

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
6.-.-.-Ligases.probable
6.3.-.-Forming carbon-nitrogen bonds.probable
6.3.4.-Other carbon--nitrogen ligases.probable
6.3.4.3Formate--tetrahydrofolate ligase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3DO6, chain A
Confidence level:very confident
Coverage over the Query: 29-82,93-178,231-400
View the alignment between query and template
View the model in PyMOL
Template: 2EO2, chain A
Confidence level:very confident
Coverage over the Query: 172-242
View the alignment between query and template
View the model in PyMOL