Citrus Sinensis ID: 044150

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-
Protein Sequence
MLYQTHHLNFFQFHTFTPIHLSATSLLSSPPPPPPPTDFQDMECVEAALKTSLRKEMALKLSPQAVDEICAVNLPNGVACDDFFVDDLLDFSNEDVVAEQQQLQEPQQEKGEEQKKHTLTVCSKQDQDLDERLNFDDLGPIPTSELAVPTDDVANLEWLSHFVEDSFAEYSSPFPAGTLPVKAKENGAEPEHKPALAIHCFKTPIPAKARSKRSRTGLRIWSLGSPSLSDSSSTSSASSSSSPSSPWPVSTNPGSLASLRPAEPFIVKPPKKKLKKKSPPEGYNAGGNISWGQVTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSSELHSNHHRKVMEMRRKKEGLGRTEPGLAPAVVSSF
Secondary Structure (PSIPRED)
ccccccccccHHHcccccccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHccHHHHHHHHHcccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccEEcccccccccccccccccccccccccccccccHHHcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHccHHHHHHHHHccccccccccccEHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccHccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccHHHcccEEEcccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccc
Coil and Loop (DISEMBL)
mlyqthhlnffqfhtftpihlsatsllssppppppptdfqdmECVEAALKTSLRKEMALKLSPQAVDEICavnlpngvacddffvddlldfsneDVVAEQQQLqepqqekgeeqkkhtltvcskqdqdlderlnfddlgpiptselavptddvanLEWLSHFvedsfaeysspfpagtlpvkakengaepehkpalaihcfktpipakarskrsrtglriwslgspslsdssstssassssspsspwpvstnpgslaslrpaepfivkppkkklkkksppegynaggniswgqvtrrcshcgvqktpqwrtgplgaktlcnacgvryksgrlfpeyrpacsptfsselhsnHHRKVMEMRRKkeglgrtepglapavvssf
Flexible Loop (DISEMBL)
MLYQTHHLNFFQFHTFTPIHLSATSLLSSPPPPPPPTDFQDMECVEAALKTSLRKEMALKLSPQAVDEICAVNLPNGVACDDFFVDDLLDFSNEDVVAEQQQLqepqqekgeeqkkhtltvcskqdqdlDERLNFDDLGPIPTSELAVPTDDVANLEWLSHFVEDSFAEYSSPFPAGTLPVKAKENGAEPEHKPalaihcfktpipakarskrsrtglriwslgspslsdssstssassssspsspwpVSTNpgslaslrpaepfivkppkkklkkksppegynaggniswgqVTRRCSHCGVqktpqwrtgplgAKTLCNACGVRYKSGRLFPEYRPACsptfsselhsnhhRKVMEMRrkkeglgrtepglapavvssf
Low Complexity Region (SEG)
MLYQTHHLNFFQFHTFTPIHLSATsllsspppppppTDFQDMECVEAALKTSLRKEMALKLSPQAVDEICAVNLPNGVACddffvddlldfSNEDVVAeqqqlqepqqekgeeqkkHTLTVCSKQDQDLDERLNFDDLGPIPTSELAVPTDDVANLEWLSHFVEDSFAEYSSPFPAGTLPVKAKENGAEPEHKPALAIHCFKTPIPAKARSKRSRTGLRIWslgspslsdssstssassssspsspwpvsTNPGSLASLRPAEPFIVkppkkklkkksppEGYNAGGNISWGQVTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSSELHSNHHRKVMEMRRKKEGLGRTEPGLAPAVVSSF
Disordered region (IsUnstruct)
********************************************************MALKLSPQAVDEICAVNLPNGVACDDFFVDDLLDFSNE*******************************************LGPIPTSELAVPTDDVANLEWLSHFVEDSFAEY*************************LAIHCFKT**********************************************************************************GGNISWGQVTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPA******************************************
Disordered Region (DISOPRED)
******HLNFFQFHTFTPI****************************ALK**L**********QAVDEICAVNLPNGVACDDFFVDDLLDFSNEDVVAEQ*****************************************PTSELAVPTDDVANLEWLSHFVED************************************************************************************************************************************CSHCGVQKTPQWRTGPLGAKTLCNACGVRY******************************************************
Disordered Region (DISEMBL)
MLYQTHHLNFFQFHTFTPIHLSATSLLSSPPPPPPPTDFQDMECVEAALKTSLRKEMALKLSPQAVDEICAVNLPNGVACDDFFVDDLLDFSNEDVVA**********************VCSKQDQDLDERLNFDDLGPIPTSELAVPTDDVANLEWLSHFVEDSFAEYSSPFPAGTLPVKA********HKPALAIHCFKTPIPA********TGLRIWSLG*****************************GSLASLRPAEPFIVKPP************YNAGGNISWGQVTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSSELHSNHHRKVMEMRRKKEGLGRTEPGLAPAVVSSF
Disordered Region (DISPRO)
MLYQTHHLNFFQFHTFTPIHLSATSLLSSPPPPPPPTDFQDMECVEAALKTSLRKEMALKLSPQAVDEICAVNLPNGVACDDFFVDDLLDFSN********************************************LGPIPTSELAVPTDDVANLEWLSHFVEDSFAEY****************************************************************************************************************************TRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSS***********************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLYQTHHLNFFQFHTFTPIHLSATSLLSSPPPPPPPTDFQDMECVEAALKTSLRKEMALKLSPQAVDEICAVNLPNGVACDDFFVDDLLDFSNEDVVAEQQQLQEPQQEKGEEQKKHTLTVCSKQDQDLDERLNFDDLGPIPTSELAVPTDDVANLEWLSHFVEDSFAEYSSPFPAGTLPVKAKENGAEPEHKPALAIHCFKTPIPAKARSKRSRTGLRIWSLGSPSLSDSSSTSSASSSSSPSSPWPVSTNPGSLASLRPAEPFIVKPPKKKLKKKSPPEGYNAGGNISWGQVTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSSELHSNHHRKVMEMRRKKEGLGRTEPGLAPAVVSSF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	381	2.2.26 [Sep-21-2011]
Q9FH57	339	GATA transcription factor	yes	no	0.832	0.935	0.522	1e-69
Q9SD38	312	GATA transcription factor	no	no	0.784	0.958	0.470	1e-53
O65515	238	GATA transcription factor	no	no	0.577	0.924	0.411	2e-47
O82632	308	GATA transcription factor	no	no	0.622	0.769	0.390	4e-43
P69781	331	GATA transcription factor	no	no	0.674	0.776	0.395	1e-36
O49741	264	GATA transcription factor	no	no	0.477	0.689	0.409	8e-35
O49743	240	GATA transcription factor	no	no	0.422	0.670	0.424	2e-34
Q8L4M6	269	GATA transcription factor	no	no	0.619	0.877	0.364	2e-30
Q8LAU9	274	GATA transcription factor	no	no	0.181	0.251	0.739	5e-27
Q9SV30	322	GATA transcription factor	no	no	0.178	0.211	0.764	1e-26

>sp|Q9FH57|GATA5_ARATH GATA transcription factor 5 OS=Arabidopsis thaliana GN=GATA5 PE=2 SV=1

 Score =  263 bits (672), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 186/356 (52%), Positives = 225/356 (63%), Gaps = 39/356 (10%)

Query: 46  EAALKTSLRKEMALKLSPQAVDEICAVNLP-NGVACDDFFVDDLLDFSNEDVVAEQQQLQ 104
           +AALK+S+RKEMALK +    +E  AV    NG + DDF VDDLLD SN+DV A+++   
Sbjct: 3   QAALKSSVRKEMALKTTSPVYEEFLAVTTAQNGFSVDDFSVDDLLDLSNDDVFADEETDL 62

Query: 105 EPQQEKGEEQKKHTLTVCSKQDQDLDERL-------NFDDLGPIPTSELAVPTDDVANLE 157
           + Q E         + V S++  D  + L         DD G +PTSEL++P DD+ANLE
Sbjct: 63  KAQHE--------MVRVSSEEPNDDGDALRRSSDFSGCDDFGSLPTSELSLPADDLANLE 114

Query: 158 WLSHFVEDSFAEYSSPFPAGTLPVKAKENGAEPEHKPALAIH---CFKTPIPAKARSKRS 214
           WLSHFVEDSF EYS P   GT   K      + +H P  A+    CFK+P+PAKARSKR+
Sbjct: 115 WLSHFVEDSFTEYSGPNLTGTPTEKPAWLTGDRKH-PVTAVTEETCFKSPVPAKARSKRN 173

Query: 215 RTGLRIWSLGSPSLSDSSSTSSASSSSSPSSP-WPVSTNPGSLASLRPAEPFIV--KPP- 270
           R GL++WSLGS S S  SS+ S SSSSS  S  W         +     EP +   +PP 
Sbjct: 174 RNGLKVWSLGSSSSSGPSSSGSTSSSSSGPSSPW--------FSGAELLEPVVTSERPPF 225

Query: 271 KKKLKKKSPPEGYNAGGNISWGQVTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSG 330
            KK KK+S    ++  G +   Q  R+CSHCGVQKTPQWR GP+GAKTLCNACGVRYKSG
Sbjct: 226 PKKHKKRSAESVFS--GELQQLQPQRKCSHCGVQKTPQWRAGPMGAKTLCNACGVRYKSG 283

Query: 331 RLFPEYRPACSPTFSSELHSNHHRKVMEMRRKKEGLGRTEPGL-----APAVVSSF 381
           RL PEYRPACSPTFSSELHSNHHRKV+EMRRKKE     E GL     +P  V SF
Sbjct: 284 RLLPEYRPACSPTFSSELHSNHHRKVIEMRRKKEPTSDNETGLNQLVQSPQAVPSF 339

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SD38|GATA6_ARATH GATA transcription factor 6 OS=Arabidopsis thaliana GN=GATA6 PE=2 SV=1

 Score =  211 bits (536), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 166/353 (47%), Positives = 197/353 (55%), Gaps = 54/353 (15%)

Query: 42  MECVEAALKTSLRKEMALKLSPQAVDEICAVNLPNGVACDDFFVDDLLDFSNE----DVV 97
           ME VE  LK S  K+  L    Q           NG   DDF VDDLLDFS E    DV+
Sbjct: 1   MESVELTLKNSNMKDKTLTGGAQ-----------NG---DDFSVDDLLDFSKEEEDDDVL 46

Query: 98  AEQQQLQEPQQEKGEEQKKHTLTVCSKQDQDLDERLNFDDLGPIPTSELAVPTDDVANLE 157
            E +   + Q+++G              D++   R N        TS L+VP DD+A LE
Sbjct: 47  VEDEAELKVQRKRG------------VSDENTLHRSNDFSTADFHTSGLSVPMDDIAELE 94

Query: 158 WLSHFVEDS-FAEYSSPFPAGTLPVKAKENGAEPEHKPALAIHCFKTPIPA-KARSKRSR 215
           WLS+FV+DS F  YS+P          + +  +P  +      CFK+  PA K R KR+R
Sbjct: 95  WLSNFVDDSSFTPYSAPTNKPVWLTGNRRHLVQPVKEET----CFKSQHPAVKTRPKRAR 150

Query: 216 TGLRIWSLGSPSLSDSSSTSSASSSSSPSSPWPVSTNPGSLASLRPAEPFIVKPPKKKLK 275
           TG+R+WS GS SL+DSSS+S+ SSSSSP    P+    G        EP      KKK+ 
Sbjct: 151 TGVRVWSHGSQSLTDSSSSSTTSSSSSPRPSSPLWLASGQFLD----EPMTKTQKKKKVW 206

Query: 276 KKSPPEGYNAGGNISWGQVT-RRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFP 334
           K       NAG   +  Q   R+C HCGVQKTPQWR GPLGAKTLCNACGVRYKSGRL P
Sbjct: 207 K-------NAGQTQTQTQTQTRQCGHCGVQKTPQWRAGPLGAKTLCNACGVRYKSGRLLP 259

Query: 335 EYRPACSPTFSSELHSNHHRKVMEMRRKKEG------LGRTEPGLAPAVVSSF 381
           EYRPACSPTFSSELHSNHH KV+EMRRKKE        G  +P     VVSSF
Sbjct: 260 EYRPACSPTFSSELHSNHHSKVIEMRRKKETSDGAEETGLNQPVQTVQVVSSF 312

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|O65515|GATA7_ARATH GATA transcription factor 7 OS=Arabidopsis thaliana GN=GATA7 PE=2 SV=1

 Score =  190 bits (483), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/284 (41%), Positives = 143/284 (50%), Gaps = 64/284 (22%)

Query: 82  DFFVDDLLDFSNEDVVAEQQQLQEPQQEKGEEQKKHTLTVCSKQDQDLDERLNFDDLGPI 141
           DF VDDLLD SN D   E        Q K +EQ++      S Q   L      +DL   
Sbjct: 10  DFSVDDLLDLSNADTSLESSS----SQRKEDEQEREKFKSFSDQSTRLSPP---EDLLSF 62

Query: 142 PTSELAVPTDDVANLEWLSHFVEDSFAE--YSSPFPAGTLPVKAKENGAEPEHKPALAIH 199
           P      P  D+ +LEWLS+FVEDSF+E   SS FP                  P  ++ 
Sbjct: 63  PGD---APVGDLEDLEWLSNFVEDSFSESYISSDFPVN----------------PVASVE 103

Query: 200 CFKTPIPAKARSKRSRTGLRIWSLGSPSLSDSSSTSSASSSSSPSSPWPVSTNPGSLASL 259
             +  +P K RSKR RT  RIWS+ SPS                                
Sbjct: 104 VRRQCVPVKPRSKRRRTNGRIWSMESPS-------------------------------- 131

Query: 260 RPAEPFIVKPPKKKLKKKSPPEGYNAGGNISWGQVTRRCSHCGVQKTPQWRTGPLGAKTL 319
               P +     ++ K+       + GG +   Q+ R CSHCGVQKTPQWR GPLGAKTL
Sbjct: 132 ----PLLSTAVARRKKRGRQKVDASYGGVVQQQQLRRCCSHCGVQKTPQWRMGPLGAKTL 187

Query: 320 CNACGVRYKSGRLFPEYRPACSPTFSSELHSNHHRKVMEMRRKK 363
           CNACGVR+KSGRL PEYRPACSPTF++E+HSN HRKV+E+R  K
Sbjct: 188 CNACGVRFKSGRLLPEYRPACSPTFTNEIHSNSHRKVLELRLMK 231

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|O82632|GATA9_ARATH GATA transcription factor 9 OS=Arabidopsis thaliana GN=GATA9 PE=2 SV=1

 Score =  175 bits (444), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/297 (39%), Positives = 148/297 (49%), Gaps = 60/297 (20%)

Query: 81  DDFFVDDLLDFSNEDVVAEQQQLQEPQQEKGEEQKKHTLTVCSKQDQDLDERLNFDDLGP 140
           D F VDDLLDFSN+D   +      P           TL+  +  D      L  D  G 
Sbjct: 16  DSFVVDDLLDFSNDDGEVDDGLNTLPDSS--------TLSTGTLTDSSNSSSLFTDGTG- 66

Query: 141 IPTSELAVPTDDVANLEWLSHFVEDSFAE-----------YSSPFPAGTLPVKAKENGAE 189
              S+L +P DD+A LEWLS+FVE+SFA              +P   G+      +   E
Sbjct: 67  --FSDLYIPNDDIAELEWLSNFVEESFAGEDQDKLHLFSGLKNPQTTGSTLTHLIKPEPE 124

Query: 190 PEHKPALAIHCFKTPIPAKARSKRSRTGLRIWSLGSPSLSDSSSTSSASSSSSPSSPWPV 249
            +H+  + I      +PAKARSKRSR+    W+    SL+DS  T+              
Sbjct: 125 LDHQ-FIDIDESNVAVPAKARSKRSRSAASTWASRLLSLADSDETN-------------- 169

Query: 250 STNPGSLASLRPAEPFIVKPPKKKLKKKSPPEGYNAGGNISWGQVT--RRCSHCGVQKTP 307
                               PKKK +++   + +    ++  G+    RRC HC  +KTP
Sbjct: 170 --------------------PKKK-QRRVKEQDFAGDMDVDCGESGGGRRCLHCATEKTP 208

Query: 308 QWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSSELHSNHHRKVMEMRRKKE 364
           QWRTGP+G KTLCNACGVRYKSGRL PEYRPA SPTF    HSN HRKVME+RR+KE
Sbjct: 209 QWRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPTFVMARHSNSHRKVMELRRQKE 265

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|P69781|GAT12_ARATH GATA transcription factor 12 OS=Arabidopsis thaliana GN=GATA12 PE=2 SV=1

 Score =  154 bits (389), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 150/301 (49%), Gaps = 44/301 (14%)

Query: 82  DFFVDDLL-DFSNEDVVAEQQQLQEPQQEKGEEQKKHTLTVCSKQDQDLDERLNFDDLGP 140
           DF VDDLL DFSN+D                 +    +         D+ +  +F     
Sbjct: 13  DFAVDDLLVDFSNDDDEENDVVADSTTTTTITDSSNFSAADLPSFHGDVQDGTSF----- 67

Query: 141 IPTSELAVPTDDVAN-LEWLSHFVEDSFA-------EYSSPFPAGTLPVKAKENGAEPEH 192
             + +L +P+DD+A+ LEWLS+ V++S +       E  S F +   P   K +   PE+
Sbjct: 68  --SGDLCIPSDDLADELEWLSNIVDESLSPEDVHKLELISGFKSRPDP---KSDTGSPEN 122

Query: 193 -KPALAIHCFKTPIPAKARSKRSRTGLRIWS---LGSPSLSDSSST-----SSASSSSSP 243
              +  I      +PAKARSKRSR     W+   L   +  DS  T     SS    S P
Sbjct: 123 PNSSSPIFTTDVSVPAKARSKRSRAAACNWASRGLLKETFYDSPFTGETILSSQQHLSPP 182

Query: 244 SSPWPVSTNPGSLASLRPAEPFIVKPPKKKLKKKSPPEGYNAGGNISWGQVTRRCSHCGV 303
           +SP      P  +A L   +   V    ++ K  S PE        S G   RRC HC  
Sbjct: 183 TSP------PLLMAPLGKKQ--AVDGGHRRKKDVSSPE--------SGGAEERRCLHCAT 226

Query: 304 QKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSSELHSNHHRKVMEMRRKK 363
            KTPQWRTGP+G KTLCNACGVRYKSGRL PEYRPA SPTF    HSN HRKVME+RR+K
Sbjct: 227 DKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLAKHSNSHRKVMELRRQK 286

Query: 364 E 364
           E
Sbjct: 287 E 287

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|O49741|GATA2_ARATH GATA transcription factor 2 OS=Arabidopsis thaliana GN=GATA2 PE=2 SV=1

 Score =  148 bits (373), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 91/222 (40%), Positives = 115/222 (51%), Gaps = 40/222 (18%)

Query: 145 ELAVPTDDVANLEWLSHFVEDSFAEYSSPFPAGTLPVKAKENGAEPEHKPALAIHCFKTP 204
           ++ VP+DD A+LEWLS FV+DSFA++ +    GT+     E                 T 
Sbjct: 68  DICVPSDDAAHLEWLSQFVDDSFADFPANPLGGTMTSVKTE-----------------TS 110

Query: 205 IPAKARSKRSRTGLRIWSLGSPSLSDSSSTSSASSSSSPSSPWPVSTNPGSLASLRPAEP 264
            P K RSKRSR                    + +  +   SP P+ +    L S   A  
Sbjct: 111 FPGKPRSKRSR--------------------APAPFAGTWSPMPLESEHQQLHS---AAK 147

Query: 265 FIVKPPKKKLKKKSPPEGYNAGGNISWGQVTRRCSHCGVQKTPQWRTGPLGAKTLCNACG 324
           F  K  +            ++    + G   RRC+HC  +KTPQWRTGPLG KTLCNACG
Sbjct: 148 FKPKKEQSGGGGGGGGRHQSSSSETTEGGGMRRCTHCASEKTPQWRTGPLGPKTLCNACG 207

Query: 325 VRYKSGRLFPEYRPACSPTFSSELHSNHHRKVMEMRRKKEGL 366
           VR+KSGRL PEYRPA SPTF    HSN HRKVME+RR+KE +
Sbjct: 208 VRFKSGRLVPEYRPASSPTFVLTQHSNSHRKVMELRRQKEVM 249

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|O49743|GATA4_ARATH GATA transcription factor 4 OS=Arabidopsis thaliana GN=GATA4 PE=2 SV=1

 Score =  147 bits (370), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/224 (42%), Positives = 117/224 (52%), Gaps = 63/224 (28%)

Query: 143 TSELAVPTDDVANLEWLSHFVEDSFAEYSSPFPAGTLPVKAKENGAEPEHKPALAIHCFK 202
           T +L VP+DD A+LEWLS FV+DSF++    FPA  L +  +         P ++     
Sbjct: 64  THDLCVPSDDAAHLEWLSRFVDDSFSD----FPANPLTMTVR---------PEISFT--- 107

Query: 203 TPIPAKARSKRSRTGLRIWSLGSPSLSDSSSTSSASSSSSPSSPWPVSTNPGSLASLRPA 262
                K RS+RSR                                P  +  G+ A +  +
Sbjct: 108 ----GKPRSRRSRA-------------------------------PAPSVAGTWAPMSES 132

Query: 263 EPF--IVKPPKKKLKKKSPPEGYNAGGNISWGQVTRRCSHCGVQKTPQWRTGPLGAKTLC 320
           E    + KP  KK+        YNA    + G   RRC+HC  +KTPQWRTGPLG KTLC
Sbjct: 133 ELCHSVAKPKPKKV--------YNAESVTADG--ARRCTHCASEKTPQWRTGPLGPKTLC 182

Query: 321 NACGVRYKSGRLFPEYRPACSPTFSSELHSNHHRKVMEMRRKKE 364
           NACGVRYKSGRL PEYRPA SPTF    HSN HRKVME+RR+KE
Sbjct: 183 NACGVRYKSGRLVPEYRPASSPTFVLTQHSNSHRKVMELRRQKE 226

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L4M6|GATA3_ARATH GATA transcription factor 3 OS=Arabidopsis thaliana GN=GATA3 PE=2 SV=2

 Score =  133 bits (335), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/321 (36%), Positives = 154/321 (47%), Gaps = 85/321 (26%)

Query: 48  ALKTSLRKEMALKLSPQAVDEICAVNLPNGVAC-DDFFVDDLLDFSNEDVVAEQQQLQEP 106
           ALK SLR E  + L    V  I + +L    +  +DF V+  LDFS E    E++++   
Sbjct: 9   ALKASLRGESTISLKHHQV--IVSEDLSRTSSLPEDFSVECFLDFS-EGQKEEEEEVVSV 65

Query: 107 QQEKGEEQKKHTLTVCSKQDQDLDERLNFDDLGPIPTSELAVPTDDVANLEWLSHFVEDS 166
              + +E+++H     S+          FD L        ++P +DV  LEW+S  V+D 
Sbjct: 66  SSSQEQEEQEHDCVFSSQP-------CIFDQLP-------SLPDEDVEELEWVSRVVDDC 111

Query: 167 FAEYSSPFPAGTLPVKAKENGAEPEHKPALAIHCFKTPIPAKARSKRSR---TGLRIWSL 223
               SSP  +  L    K        KP+ +       IP K R+KRSR   TG R+W L
Sbjct: 112 ----SSPEVSLLLTQTHKT-------KPSFS------RIPVKPRTKRSRNSLTGSRVWPL 154

Query: 224 GSPSLSDSSSTSSASSSSSPSSPWPVSTNPGSLASLRPAEPFIVKPPKKKLKKKSPPEGY 283
                                    VSTN    A+             ++L+KK      
Sbjct: 155 -------------------------VSTNHQHAAT-------------EQLRKKKQETVL 176

Query: 284 NAGGNISWGQVTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPT 343
                       RRCSHCG   TPQWRTGP+G KTLCNACGVR+KSGRL PEYRPA SPT
Sbjct: 177 ---------VFQRRCSHCGTNNTPQWRTGPVGPKTLCNACGVRFKSGRLCPEYRPADSPT 227

Query: 344 FSSELHSNHHRKVMEMRRKKE 364
           FS+E+HSN HRKV+E+R+ KE
Sbjct: 228 FSNEIHSNLHRKVLELRKSKE 248

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LAU9|GATA1_ARATH GATA transcription factor 1 OS=Arabidopsis thaliana GN=GATA1 PE=2 SV=2

 Score =  122 bits (306), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 51/69 (73%), Positives = 60/69 (86%)

Query: 296 RRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSSELHSNHHRK 355
           R+C HCG +KTPQWR GP G KTLCNACGVRYKSGRL PEYRPA SPTF++ELHSN HRK
Sbjct: 194 RKCQHCGAEKTPQWRAGPAGPKTLCNACGVRYKSGRLVPEYRPANSPTFTAELHSNSHRK 253

Query: 356 VMEMRRKKE 364
           ++EMR++ +
Sbjct: 254 IVEMRKQYQ 262

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SV30|GATA8_ARATH GATA transcription factor 8 OS=Arabidopsis thaliana GN=GATA8 PE=2 SV=1

 Score =  121 bits (303), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 52/68 (76%), Positives = 57/68 (83%)

Query: 296 RRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSSELHSNHHRK 355
           R+C HC V KTPQWR GP+G KTLCNACGVRYKSGRLFPEYRPA SPTF+  LHSN H+K
Sbjct: 229 RKCMHCEVTKTPQWRLGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFTPALHSNSHKK 288

Query: 356 VMEMRRKK 363
           V EMR K+
Sbjct: 289 VAEMRNKR 296

Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	381
224134162	333	predicted protein [Populus trichocarpa]	0.855	0.978	0.581	2e-85
224094909	338	predicted protein [Populus trichocarpa]	0.839	0.946	0.554	3e-83
302398799	331	GATA domain class transcription factor [	0.850	0.978	0.582	1e-81
225431219	338	PREDICTED: GATA transcription factor 5 [	0.853	0.961	0.562	1e-80
363808354	352	uncharacterized protein LOC100783966 [Gl	0.905	0.980	0.523	6e-80
147783505	338	hypothetical protein VITISV_037635 [Viti	0.853	0.961	0.557	6e-79
255560976	398	conserved hypothetical protein [Ricinus	0.976	0.934	0.506	3e-78
297735055	305	unnamed protein product [Vitis vinifera]	0.774	0.967	0.518	2e-76
297794383	339	zinc finger family protein [Arabidopsis	0.824	0.926	0.515	2e-68
15239343	339	GATA transcription factor 5 [Arabidopsis	0.832	0.935	0.522	9e-68

>gi|224134162|ref|XP_002327771.1| predicted protein [Populus trichocarpa] gi|222836856|gb|EEE75249.1| predicted protein [Populus trichocarpa]

 Score =  322 bits (825), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 200/344 (58%), Positives = 238/344 (69%), Gaps = 18/344 (5%)

Query: 42  MECVEAALKTSLRKEMALKLSPQAVDEICAVNLPNGVACDDFFVDDLLDFSNEDVVAEQQ 101
           ME VE ALKTS RKEMA+K SPQ +D+   VN+ NG++ DDF VD+LLDFSNE+   E +
Sbjct: 1   MERVEGALKTSFRKEMAVKFSPQVLDDFWPVNVTNGMSSDDFSVDELLDFSNENGFIEDE 60

Query: 102 QLQEPQQEKGEEQKKHTLTVCSKQDQDLDERLNF---DDLGPIPTSELAVPTDDVANLEW 158
              E         K+ TL    K+D++ D    F   +D    PTSEL VPTDD+A+LEW
Sbjct: 61  ---ENPCVVSVSHKQETL----KEDKNNDRSPYFAVKEDFVSGPTSELCVPTDDLASLEW 113

Query: 159 LSHFVEDSFAEYSSPFPAGTLPVK-AKENGAEPEHKPALAIHCFKTPIPAKARSKRSRTG 217
           LSHFVEDS +EY++PFPA   P +  KEN AE E K  L   CFKTP+PAKARSKR+RTG
Sbjct: 114 LSHFVEDSNSEYAAPFPAIVSPPEPEKENFAEQE-KSVLTEPCFKTPVPAKARSKRTRTG 172

Query: 218 LRIWSLGSPSLSDSSSTSSASSSSSPSSP-WPVSTNPGSLASLRPAEPFIVKPPKKKLKK 276
           +R+W LGSP+L++SS++SS+S+SSS  S  W + T P     L  AEP   + P  K  K
Sbjct: 173 VRVWPLGSPTLTESSTSSSSSTSSSSPSSPWLIHTKP-----LLNAEPLWFEKPVVKRMK 227

Query: 277 KSPPEGYNAGGNISWGQVTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEY 336
           K P     A G       +RRCSHCG+QKTPQWR GP G+KTLCNACGVRYKSGRL PEY
Sbjct: 228 KKPSFHAAASGGGGGSHSSRRCSHCGIQKTPQWRAGPNGSKTLCNACGVRYKSGRLLPEY 287

Query: 337 RPACSPTFSSELHSNHHRKVMEMRRKKEGLGRTEPGLAPAVVSS 380
           RPACSPTFS ELHSNHHRKV+EMRRKKE LG+TEPGL   VV S
Sbjct: 288 RPACSPTFSKELHSNHHRKVLEMRRKKEILGQTEPGLVQPVVPS 331

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224094909|ref|XP_002310287.1| predicted protein [Populus trichocarpa] gi|222853190|gb|EEE90737.1| predicted protein [Populus trichocarpa]

 Score =  315 bits (806), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 198/357 (55%), Positives = 239/357 (66%), Gaps = 37/357 (10%)

Query: 42  MECVEAALKTSLRKEMALKLSPQAVDEICAVNLPNGVACDDFFVDDLLDFSNEDVVAEQQ 101
           MECVE ALKTS RKEMA+K SPQ +D+  AVN+PNG++ DDF V+ LLDFSNE+   E++
Sbjct: 1   MECVEGALKTSFRKEMAMKFSPQVLDDFWAVNVPNGMSSDDFSVEKLLDFSNENDFIEEE 60

Query: 102 QLQ--------------EPQQEKGEEQKKHTLTVCSKQDQDLDERLNF---DDLGPIPTS 144
           + +               P+QE  EE            D++ D    F   DD   +PTS
Sbjct: 61  EEEGGDKEKPCVFSVSVSPKQEALEE------------DKNSDSSPGFAVKDDFFSVPTS 108

Query: 145 ELAVPTDDVANLEWLSHFVEDSFAEYSSPFPAGTLPVKAKENGAEPEHKPALAIHCFKTP 204
           EL VPTDD A+LEWLSHFVEDS +EY++PFP    P + K+     + K  L    FKTP
Sbjct: 109 ELCVPTDDFASLEWLSHFVEDSNSEYAAPFPTNVSPPEPKKENPVEQEKLVLEEPLFKTP 168

Query: 205 IPAKARSKRSRTGLRIWSLGSPSLSDSSSTSSASSSSSPSSPWPVSTNPGSLASLRPAEP 264
           +P KARSKR+R G+R+W LGSPSL++SSS+SS++SSSSPSSPW V + P     L+    
Sbjct: 169 VPGKARSKRTRNGVRVWPLGSPSLTESSSSSSSTSSSSPSSPWLVYSKP----CLKVEPV 224

Query: 265 FIVKPPKKKLKKKSPPEGYNAGGNISWGQVTRRCSHCGVQKTPQWRTGPLGAKTLCNACG 324
           +  KP  KK+KK +        G+ S    +RRCSHCGVQKTPQWR GP G+KTLCNACG
Sbjct: 225 WFEKPVAKKMKKPAVEAAAKGCGSNS----SRRCSHCGVQKTPQWRAGPNGSKTLCNACG 280

Query: 325 VRYKSGRLFPEYRPACSPTFSSELHSNHHRKVMEMRRKKEGLGRTEPGLAPAVVSSF 381
           VRYKSGRL PEYRPACSPTFS ELHSNHHRKV+EMRR KEGL  TEPGLA   V SF
Sbjct: 281 VRYKSGRLLPEYRPACSPTFSKELHSNHHRKVLEMRRNKEGLVPTEPGLAQPFVPSF 337

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302398799|gb|ADL36694.1| GATA domain class transcription factor [Malus x domestica]

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 202/347 (58%), Positives = 236/347 (68%), Gaps = 23/347 (6%)

Query: 42  MECVEAALKTSLRKEMALKLS-PQAV---DEICAVNLPNGV-ACDDFFVDDLLDFSNEDV 96
           MECVEAALKTS+RKEMA+K + PQ V   D +    + NG  ACDDF VDDLLDFSNED 
Sbjct: 1   MECVEAALKTSIRKEMAVKATGPQVVVFDDFLWGGAVVNGQNACDDFSVDDLLDFSNEDG 60

Query: 97  VAEQQQLQEPQQEKGEEQKKHTLTVCSKQDQDLD-ERLNFDDLGPIPTSELAVPTDDVAN 155
             E +      +E+G+++K       S Q Q+ + E+ N  +    P SEL+VP DD+ N
Sbjct: 61  FVETEA-----EEEGDKEKVKGFVSVSLQKQNQETEKSNLSEKIE-PASELSVPADDLEN 114

Query: 156 LEWLSHFVEDSFAEYSSPFPAGTLPVKAKENGAEPEHKPALAIHCFKTPIPAKARSKRSR 215
           LEWLSHFVEDSF+E+++  PAG LP K K         P     CFKTP+PAKARSKR R
Sbjct: 115 LEWLSHFVEDSFSEFTTALPAGFLPEKPKSEKRPDLETPFPEKPCFKTPVPAKARSKRRR 174

Query: 216 TGLRIWSLGSPSLSDSSSTSSASSSSSPSSPWPVSTNPGSLASLRPAEPFIVKPPKKKLK 275
           TG R+WSLGSPSL++SSS+SS+SSSSSPSSPW +     +  S  P    + KPP+K   
Sbjct: 175 TGGRVWSLGSPSLTESSSSSSSSSSSSPSSPWTIYPATQNQESAEPVSS-VEKPPRK--- 230

Query: 276 KKSPPEGYNAGGNISWGQVTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPE 335
               P+     G+ S  Q  RRCSHCGVQKTPQWRTGP GAKTLCNACGVRYKSGRL PE
Sbjct: 231 ----PKRRLVDGSSS--QPPRRCSHCGVQKTPQWRTGPNGAKTLCNACGVRYKSGRLLPE 284

Query: 336 YRPACSPTFSSELHSNHHRKVMEMRRKKEGLGRTEPGLA-PAVVSSF 381
           YRPACSPTFSSELHSNHHRKV+EMRRKKEG G  EP    P  V SF
Sbjct: 285 YRPACSPTFSSELHSNHHRKVIEMRRKKEGPGTPEPSTTIPPAVPSF 331

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431219|ref|XP_002272762.1| PREDICTED: GATA transcription factor 5 [Vitis vinifera]

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 197/350 (56%), Positives = 241/350 (68%), Gaps = 25/350 (7%)

Query: 42  MECVEAALKTSL-RKEMALKLS--PQAVDEICAVNLPNGVACDDFFVDDLLDFSNEDV-- 96
           MECVE ALK+S+ R E+A KL+  P  +D++C  N  +GV+ DDF +DDLLDF+N  +  
Sbjct: 1   MECVEKALKSSVVRPELAFKLTQQPACMDDMCMGNGQSGVSGDDFSIDDLLDFTNGGIGE 60

Query: 97  -VAEQQQLQEPQQEKGEEQKKHTLTVCSKQDQDLDERLNFDDLGPIPTSELAVPTDDVAN 155
            + +++  ++  +  G    +  LT     +         D+   +P +EL VP DD+A+
Sbjct: 61  GLFQEEDEEDEDKGCGSLSPRGELTENDNSNLTTTTFSVKDEFPSVPATELTVPADDLAD 120

Query: 156 LEWLSHFVEDSFAEYSSPFPAGTLPVKAK---ENGAEPEHKPALAIHCFKTPIPAKARSK 212
           LEWLSHFVEDSF+EYS+PFP GTL  KA+   EN  EPE  P     C KTP PAKARSK
Sbjct: 121 LEWLSHFVEDSFSEYSAPFPHGTLTEKAQNQTENPPEPE-TPLQIKSCLKTPFPAKARSK 179

Query: 213 RSRTGLRIWSLGSPSLSDSSSTSSASSSSSPSSPWPVSTNPGSLASLRPAEPF--IVKPP 270
           R+RTG R+WS+GSPSL++SSS+SS+SSSSS SSPW +  N     + +  E F   VKPP
Sbjct: 180 RARTGGRVWSMGSPSLTESSSSSSSSSSSSLSSPWLIYPN-----TCQNVESFHSAVKPP 234

Query: 271 KKKLKKKSPPEGYNAGGNISWGQVT-RRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKS 329
            KK KK+  PE   +       Q T  RCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKS
Sbjct: 235 AKKHKKRLDPEASGSA------QPTPHRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKS 288

Query: 330 GRLFPEYRPACSPTFSSELHSNHHRKVMEMRRKKEGLGRTEPGLAPAVVS 379
           GRL PEYRPACSPTFSSE+HSNHHRKV+EMRRKKE + R E GLAPAV S
Sbjct: 289 GRLLPEYRPACSPTFSSEIHSNHHRKVLEMRRKKE-VTRPESGLAPAVPS 337

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363808354|ref|NP_001242253.1| uncharacterized protein LOC100783966 [Glycine max] gi|255637027|gb|ACU18846.1| unknown [Glycine max]

 Score =  304 bits (778), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 203/388 (52%), Positives = 244/388 (62%), Gaps = 43/388 (11%)

Query: 1   MLYQTHHLNFFQFH-----TFTPIHLSATSLLSSPPPPPPPTDFQDMECVEAALKTSLRK 55
           MLYQT +   FQFH     +F+P  L A      P   P P   ++MECVEAALK++ RK
Sbjct: 1   MLYQTPYPQPFQFHHPLPSSFSP--LLAVPTTPPPLYLPFPQAEKEMECVEAALKSNYRK 58

Query: 56  EMALKLSPQAVDEICAVNLPNGVACDDFFVDDLLDFSNEDVVAEQQQLQEPQQEKGEEQK 115
           EM LKLSP+   E   V++ NG  CDDFFV+DLLDFS+ +        +EP      EQ+
Sbjct: 59  EMTLKLSPRTFTE--EVSVQNGTTCDDFFVNDLLDFSHVE--------EEP------EQQ 102

Query: 116 KHTLTVCSKQDQDLDERLNF-DDLGPIPTSELAVPTDDVANLEWLSHFVEDSFAEYSSPF 174
           + T  V  + +    E   F DD   +PTSEL+V  DD+A+LEWLSHFVEDSF+E+S+ F
Sbjct: 103 EDTPCVSLQHENPSHEPCTFKDDYASVPTSELSVLADDLADLEWLSHFVEDSFSEFSAAF 162

Query: 175 PAGTLPVKAKENGAEPEHKPALAIHCFKTPIPAKARSKRSRTGLRIWSLGSPSLSDSSST 234
           P  T    A    AEPE  P + +  FKTP+  KARSKR+R GLR+W  GSPS +DSSS+
Sbjct: 163 PTVTENPTACLKEAEPE--PEIPVFPFKTPVQTKARSKRTRNGLRVWPFGSPSFTDSSSS 220

Query: 235 SSASSSSSPSSPWPVSTNPGSLASLRPAEPFIVKPPKKKLKKKSPPEGYNAGGNISWGQV 294
           S+ SS S  S   P+     SL  L        +P  KK+KKK   +             
Sbjct: 221 STTSSFSFFSPSSPLLIYTQSLDHL------CSEPNTKKMKKKPSSDTL----------A 264

Query: 295 TRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSSELHSNHHR 354
            RRCSHCGVQKTPQWRTGPLG KTLCNACGVR+KSGRL PEYRPACSPTFSSELHSNHHR
Sbjct: 265 PRRCSHCGVQKTPQWRTGPLGPKTLCNACGVRFKSGRLLPEYRPACSPTFSSELHSNHHR 324

Query: 355 KVMEMRRKKEGLGRTEPGLAPA-VVSSF 381
           KV+EMR+KKE +   E G APA VV SF
Sbjct: 325 KVLEMRQKKETVSVDETGFAPAHVVPSF 352

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147783505|emb|CAN64003.1| hypothetical protein VITISV_037635 [Vitis vinifera]

 Score =  300 bits (769), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 195/350 (55%), Positives = 238/350 (68%), Gaps = 25/350 (7%)

Query: 42  MECVEAALKTSL-RKEMALKLS--PQAVDEICAVNLPNGVACDDFFVDDLLDFSNEDV-- 96
           MECVE ALK+S+ R E+A KL+  P   D+IC  N  +GV+ DDF +DDLLDF+N  +  
Sbjct: 1   MECVEKALKSSVVRPELAFKLTQQPACXDDICMGNGQSGVSGDDFSIDDLLDFTNGGIGE 60

Query: 97  -VAEQQQLQEPQQEKGEEQKKHTLTVCSKQDQDLDERLNFDDLGPIPTSELAVPTDDVAN 155
            + +++  ++  +  G    +  LT     +         D+   +P +EL VP DD+A+
Sbjct: 61  GLFQEEDEEDEDKGCGSLSPRRELTENDNSNLTTTTFSVKDEFPSVPATELTVPADDLAD 120

Query: 156 LEWLSHFVEDSFAEYSSPFPAGTLPVKAK---ENGAEPEHKPALAIHCFKTPIPAKARSK 212
           LEWLSHFVEDSF+EYS+PFP GTL  KA+   EN  EPE  P     C KTP PAKARSK
Sbjct: 121 LEWLSHFVEDSFSEYSAPFPPGTLTEKAQNQTENPPEPE-TPLQIKSCLKTPFPAKARSK 179

Query: 213 RSRTGLRIWSLGSPSLSDSSSTSSASSSSSPSSPWPVSTNPGSLASLRPAEPF--IVKPP 270
           R+RTG R+WS+GSPSL++SSS+SS+SSSSS SSPW +  N     + +  E F   VKPP
Sbjct: 180 RARTGGRVWSMGSPSLTESSSSSSSSSSSSLSSPWLIYPN-----TCQNVESFHSAVKPP 234

Query: 271 KKKLKKKSPPEGYNAGGNISWGQVT-RRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKS 329
            KK KK+  PE   +       Q T  RCSHCGVQKT QWRTGPLGAKTLCNACGVR+KS
Sbjct: 235 AKKHKKRLDPEASGSA------QXTPHRCSHCGVQKTXQWRTGPLGAKTLCNACGVRFKS 288

Query: 330 GRLFPEYRPACSPTFSSELHSNHHRKVMEMRRKKEGLGRTEPGLAPAVVS 379
           GRL PEYRPACSPTFSSE+HSNHHRKV+EMRRKKE + R   GLAPAV S
Sbjct: 289 GRLLPEYRPACSPTFSSEIHSNHHRKVLEMRRKKE-VTRPXSGLAPAVPS 337

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255560976|ref|XP_002521500.1| conserved hypothetical protein [Ricinus communis] gi|223539178|gb|EEF40771.1| conserved hypothetical protein [Ricinus communis]

 Score =  298 bits (763), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 206/407 (50%), Positives = 263/407 (64%), Gaps = 35/407 (8%)

Query: 1   MLYQT-HHLNF-FQFHTFTPIHLSATSLLSSPPPPPPPTDFQDMECVEAALKTSLRKEMA 58
           MLYQT HH +  F FH+  P   +++S L          +  +MECVE ALKTS RKE+ 
Sbjct: 1   MLYQTTHHYHHPFIFHS--PSATTSSSFLFYCHLLLFRWEI-EMECVEGALKTSFRKELG 57

Query: 59  LKLSPQA--VDEICAVNLPNGVACDDFFVDDLLDFSNEDVVAEQQQLQEPQQEKGEEQKK 116
            KLSPQA  VD++ A+++ NG + DDF VD+LLDFSNE+  A +++ +E ++++ +++  
Sbjct: 58  FKLSPQAFFVDDLYALSMQNGTSSDDFIVDELLDFSNEEEAAVEREDEEEEEQQQQQKAC 117

Query: 117 HTLTVCSKQDQDLDER---LNFDDLGPIPTSELAVPTDDVANLEWLSHFVEDSFAEYSSP 173
             ++V    +Q   +R       D      +EL VP DD+A+LEWLSHFVEDS +EYS+P
Sbjct: 118 TAVSVSLSPNQQQTQRPEDGKISDSTSNFATELCVPADDLASLEWLSHFVEDSNSEYSTP 177

Query: 174 FPAGTLPVKAKENGAEPEHKP--------ALAIHCFKTPIPAKARSKRSRTGLRIWSLGS 225
           FPA  + V  + +  E ++KP         L    FKTP+  KARSKR+RTG+R+W LGS
Sbjct: 178 FPAAGI-VSHENHKEENDNKPFYVTQKPVVLTETFFKTPVQTKARSKRTRTGVRVWPLGS 236

Query: 226 PSLSDSSSTSSASSSSSPSSPWP----------VSTNPGSLASLRPAEPFIV-KPPKKKL 274
           PSL++SSS+SS +SSSS SS             + T  G    L   EP    K P KKL
Sbjct: 237 PSLTESSSSSSYTSSSSSSSSSSSSSSPLSPYLIFTTQGMSREL--TEPICYEKTPIKKL 294

Query: 275 KKKSPPEGYNAGGNISWGQVTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFP 334
           KK+   E  + GG     Q  RRCSHCGVQKTPQWRTGPLGAKTLCNACGVR+KSGRL P
Sbjct: 295 KKRFSGEPASGGGG---SQPPRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRFKSGRLLP 351

Query: 335 EYRPACSPTFSSELHSNHHRKVMEMRRKKEGLGRTEPGLAPAVVSSF 381
           EYRPACSPTF SELHSNHHRKV+EMR+KKE + + EPGL P  VSSF
Sbjct: 352 EYRPACSPTFCSELHSNHHRKVLEMRKKKEVVVQVEPGLVPPAVSSF 398

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735055|emb|CBI17417.3| unnamed protein product [Vitis vinifera]

 Score =  292 bits (747), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 180/347 (51%), Positives = 222/347 (63%), Gaps = 52/347 (14%)

Query: 42  MECVEAALKTSL-RKEMALKLS--PQAVDEICAVNLPNGVACDDFFVDDLLDFSNEDV-- 96
           MECVE ALK+S+ R E+A KL+  P  +D++C  N  +GV+ DDF +DDLLDF+N  +  
Sbjct: 1   MECVEKALKSSVVRPELAFKLTQQPACMDDMCMGNGQSGVSGDDFSIDDLLDFTNGGIGE 60

Query: 97  -VAEQQQLQEPQQEKGEEQKKHTLTVCSKQDQDLDERLNFDDLGPIPTSELAVPTDDVAN 155
            + +++  ++  +  G    +  LT     +         D+   +P +EL VP DD+A+
Sbjct: 61  GLFQEEDEEDEDKGCGSLSPRGELTENDNSNLTTTTFSVKDEFPSVPATELTVPADDLAD 120

Query: 156 LEWLSHFVEDSFAEYSSPFPAGTLPVKAK---ENGAEPEHKPALAIHCFKTPIPAKARSK 212
           LEWLSHFVEDSF+EYS+PFP GTL  KA+   EN  EPE  P     C KTP PAKARSK
Sbjct: 121 LEWLSHFVEDSFSEYSAPFPHGTLTEKAQNQTENPPEPE-TPLQIKSCLKTPFPAKARSK 179

Query: 213 RSRTGLRIWSLGSPSLSDSSSTSSASSSSSPSSPWPVSTNPGSLASLRPAEPFIVKPPKK 272
           R+RTG R+WS+GSPSL++SSS+SS+SSSS          +P +  S +P           
Sbjct: 180 RARTGGRVWSMGSPSLTESSSSSSSSSSS---------LDPEASGSAQP----------- 219

Query: 273 KLKKKSPPEGYNAGGNISWGQVTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRL 332
                                   RCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRL
Sbjct: 220 ---------------------TPHRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRL 258

Query: 333 FPEYRPACSPTFSSELHSNHHRKVMEMRRKKEGLGRTEPGLAPAVVS 379
            PEYRPACSPTFSSE+HSNHHRKV+EMRRKKE + R E GLAPAV S
Sbjct: 259 LPEYRPACSPTFSSEIHSNHHRKVLEMRRKKE-VTRPESGLAPAVPS 304

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297794383|ref|XP_002865076.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] gi|297310911|gb|EFH41335.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 185/359 (51%), Positives = 217/359 (60%), Gaps = 45/359 (12%)

Query: 46  EAALKTSLRKEMALKLSPQAVDEICAVNL-PNGVACDDFFVDDLLD------FSNEDVVA 98
           + ALK+S+RKEMA K +P   +E  AV   PNG + DDF VDDLLD      F++ED   
Sbjct: 3   QTALKSSIRKEMAFKTTPPVYEEFLAVTTAPNGFSADDFSVDDLLDLSNDDVFADEDTDP 62

Query: 99  EQQQ------LQEPQQEKGEEQKKHTLTVCSKQDQDLDERLNFDDLGPIPTSELAVPTDD 152
           + QQ       +EP  +    ++   L+ C             DD G +PTSEL+VP DD
Sbjct: 63  KAQQDMVRVSSEEPNDDGDALRRSSDLSGC-------------DDFGSLPTSELSVPADD 109

Query: 153 VANLEWLSHFVEDSFAEYSSPFPAGTLPVKAKENGAEPEH--KPALAIHCFKTPIPAKAR 210
           +ANLEWLSHFV+DSF EYS P   GT   K      + +H   PA    CFK+P+PAKAR
Sbjct: 110 LANLEWLSHFVDDSFTEYSGPNLTGTPTEKPSWLTGDRKHPVTPATEESCFKSPVPAKAR 169

Query: 211 SKRSRTGLRIWSLGSPSLSDSSSTSSASSSSSPSSP-WPVSTNPGSLASLRPAEPFIV-- 267
           SKR+R G+++WSLGS S S  SS+ S SSSSS  S  W         +     EP +   
Sbjct: 170 SKRNRNGVKVWSLGSSSSSGPSSSGSTSSSSSRPSSPW--------FSGAEMLEPVVTSE 221

Query: 268 KPPKKKLKKKSPPEGYNAGGNISWGQVTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRY 327
           +PP  K  KK   E    G      Q  RRCSHCGVQKTPQWR GP+GAKTLCNACGVRY
Sbjct: 222 RPPFPKKHKKRSAESVFCGQLQQ-LQPQRRCSHCGVQKTPQWRAGPMGAKTLCNACGVRY 280

Query: 328 KSGRLFPEYRPACSPTFSSELHSNHHRKVMEMRRKKEGLGRTEPGL-----APAVVSSF 381
           KSGRL PEYRPACSPTFSSELHSNHHRKVMEMRRKKE     EPGL     +P  V SF
Sbjct: 281 KSGRLLPEYRPACSPTFSSELHSNHHRKVMEMRRKKEPTSDNEPGLNQMVQSPQAVPSF 339

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15239343|ref|NP_201433.1| GATA transcription factor 5 [Arabidopsis thaliana] gi|42573812|ref|NP_975002.1| GATA transcription factor 5 [Arabidopsis thaliana] gi|71660777|sp|Q9FH57.1|GATA5_ARATH RecName: Full=GATA transcription factor 5 gi|10177426|dbj|BAB10711.1| GATA-binding transcription factor-like protein [Arabidopsis thaliana] gi|22531223|gb|AAM97115.1| GATA-binding transcription factor-like protein [Arabidopsis thaliana] gi|34098855|gb|AAQ56810.1| At5g66320 [Arabidopsis thaliana] gi|332010815|gb|AED98198.1| GATA transcription factor 5 [Arabidopsis thaliana] gi|332010816|gb|AED98199.1| GATA transcription factor 5 [Arabidopsis thaliana]

 Score =  263 bits (672), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 186/356 (52%), Positives = 225/356 (63%), Gaps = 39/356 (10%)

Query: 46  EAALKTSLRKEMALKLSPQAVDEICAVNLP-NGVACDDFFVDDLLDFSNEDVVAEQQQLQ 104
           +AALK+S+RKEMALK +    +E  AV    NG + DDF VDDLLD SN+DV A+++   
Sbjct: 3   QAALKSSVRKEMALKTTSPVYEEFLAVTTAQNGFSVDDFSVDDLLDLSNDDVFADEETDL 62

Query: 105 EPQQEKGEEQKKHTLTVCSKQDQDLDERL-------NFDDLGPIPTSELAVPTDDVANLE 157
           + Q E         + V S++  D  + L         DD G +PTSEL++P DD+ANLE
Sbjct: 63  KAQHE--------MVRVSSEEPNDDGDALRRSSDFSGCDDFGSLPTSELSLPADDLANLE 114

Query: 158 WLSHFVEDSFAEYSSPFPAGTLPVKAKENGAEPEHKPALAIH---CFKTPIPAKARSKRS 214
           WLSHFVEDSF EYS P   GT   K      + +H P  A+    CFK+P+PAKARSKR+
Sbjct: 115 WLSHFVEDSFTEYSGPNLTGTPTEKPAWLTGDRKH-PVTAVTEETCFKSPVPAKARSKRN 173

Query: 215 RTGLRIWSLGSPSLSDSSSTSSASSSSSPSSP-WPVSTNPGSLASLRPAEPFIV--KPP- 270
           R GL++WSLGS S S  SS+ S SSSSS  S  W         +     EP +   +PP 
Sbjct: 174 RNGLKVWSLGSSSSSGPSSSGSTSSSSSGPSSPW--------FSGAELLEPVVTSERPPF 225

Query: 271 KKKLKKKSPPEGYNAGGNISWGQVTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSG 330
            KK KK+S    ++  G +   Q  R+CSHCGVQKTPQWR GP+GAKTLCNACGVRYKSG
Sbjct: 226 PKKHKKRSAESVFS--GELQQLQPQRKCSHCGVQKTPQWRAGPMGAKTLCNACGVRYKSG 283

Query: 331 RLFPEYRPACSPTFSSELHSNHHRKVMEMRRKKEGLGRTEPGL-----APAVVSSF 381
           RL PEYRPACSPTFSSELHSNHHRKV+EMRRKKE     E GL     +P  V SF
Sbjct: 284 RLLPEYRPACSPTFSSELHSNHHRKVIEMRRKKEPTSDNETGLNQLVQSPQAVPSF 339

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	381
TAIR|locus:2155056	339	GATA5 "GATA transcription fact	0.249	0.280	0.73	2.9e-66
TAIR|locus:2080828	312	GATA6 "GATA transcription fact	0.257	0.314	0.742	2.9e-50
TAIR|locus:2122214	238	GATA7 "GATA transcription fact	0.293	0.470	0.566	1.5e-41
TAIR|locus:2123738	308	GATA9 "GATA transcription fact	0.181	0.224	0.782	5.1e-39
TAIR|locus:2103346	240	GATA4 "GATA transcription fact	0.209	0.333	0.719	2.4e-37
TAIR|locus:2145259	331	GATA12 "GATA transcription fac	0.196	0.226	0.746	4e-37
TAIR|locus:2055589	264	GATA2 "GATA transcription fact	0.181	0.261	0.782	8.2e-37
TAIR|locus:2139594	269	GATA3 "GATA transcription fact	0.202	0.286	0.746	3.1e-35
TAIR|locus:2076191	274	GATA1 "GATA transcription fact	0.175	0.244	0.761	4.3e-32
TAIR|locus:2082637	322	BME3 "BLUE MICROPYLAR END 3" [	0.178	0.211	0.764	3.3e-30

TAIR|locus:2155056 GATA5 "GATA transcription factor 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 386 (140.9 bits), Expect = 2.9e-66, Sum P(2) = 2.9e-66
 Identities = 73/100 (73%), Positives = 78/100 (78%)

Query:   287 GNISWGQVTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSS 346
             G +   Q  R+CSHCGVQKTPQWR GP+GAKTLCNACGVRYKSGRL PEYRPACSPTFSS
Sbjct:   240 GELQQLQPQRKCSHCGVQKTPQWRAGPMGAKTLCNACGVRYKSGRLLPEYRPACSPTFSS 299

Query:   347 ELHSNHHRKVMEMRRKKEGLGRTEPGL-----APAVVSSF 381
             ELHSNHHRKV+EMRRKKE     E GL     +P  V SF
Sbjct:   300 ELHSNHHRKVIEMRRKKEPTSDNETGLNQLVQSPQAVPSF 339

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

TAIR|locus:2080828 GATA6 "GATA transcription factor 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 379 (138.5 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
 Identities = 78/105 (74%), Positives = 81/105 (77%)

Query:   284 NAGGNISWGQV-TRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSP 342
             NAG   +  Q  TR+C HCGVQKTPQWR GPLGAKTLCNACGVRYKSGRL PEYRPACSP
Sbjct:   208 NAGQTQTQTQTQTRQCGHCGVQKTPQWRAGPLGAKTLCNACGVRYKSGRLLPEYRPACSP 267

Query:   343 TFSSELHSNHHRKVMEMRRKKEGL-GRTEPGL-APA----VVSSF 381
             TFSSELHSNHH KV+EMRRKKE   G  E GL  P     VVSSF
Sbjct:   268 TFSSELHSNHHSKVIEMRRKKETSDGAEETGLNQPVQTVQVVSSF 312

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0009416 "response to light stimulus" evidence=IEP

TAIR|locus:2122214 GATA7 "GATA transcription factor 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 339 (124.4 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
 Identities = 64/113 (56%), Positives = 76/113 (67%)

Query:   251 TNPGSLASLRPAEPFIVXXXXXXXXXXXXXEGYNAGGNISWGQVTRRCSHCGVQKTPQWR 310
             TN G + S+    P +                 + GG +   Q+ R CSHCGVQKTPQWR
Sbjct:   120 TN-GRIWSMESPSPLLSTAVARRKKRGRQKVDASYGGVVQQQQLRRCCSHCGVQKTPQWR 178

Query:   311 TGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSSELHSNHHRKVMEMRRKK 363
              GPLGAKTLCNACGVR+KSGRL PEYRPACSPTF++E+HSN HRKV+E+R  K
Sbjct:   179 MGPLGAKTLCNACGVRFKSGRLLPEYRPACSPTFTNEIHSNSHRKVLELRLMK 231

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009416 "response to light stimulus" evidence=IEP

TAIR|locus:2123738 GATA9 "GATA transcription factor 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 308 (113.5 bits), Expect = 5.1e-39, Sum P(2) = 5.1e-39
 Identities = 54/69 (78%), Positives = 58/69 (84%)

Query:   296 RRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSSELHSNHHRK 355
             RRC HC  +KTPQWRTGP+G KTLCNACGVRYKSGRL PEYRPA SPTF    HSN HRK
Sbjct:   197 RRCLHCATEKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPASSPTFVMARHSNSHRK 256

Query:   356 VMEMRRKKE 364
             VME+RR+KE
Sbjct:   257 VMELRRQKE 265

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009416 "response to light stimulus" evidence=IEP

TAIR|locus:2103346 GATA4 "GATA transcription factor 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 313 (115.2 bits), Expect = 2.4e-37, Sum P(2) = 2.4e-37
 Identities = 59/82 (71%), Positives = 64/82 (78%)

Query:   283 YNAGGNISWGQVTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSP 342
             YNA    + G   RRC+HC  +KTPQWRTGPLG KTLCNACGVRYKSGRL PEYRPA SP
Sbjct:   147 YNAESVTADG--ARRCTHCASEKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSP 204

Query:   343 TFSSELHSNHHRKVMEMRRKKE 364
             TF    HSN HRKVME+RR+KE
Sbjct:   205 TFVLTQHSNSHRKVMELRRQKE 226

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0009416 "response to light stimulus" evidence=IEP

TAIR|locus:2145259 GATA12 "GATA transcription factor 12" [Arabidopsis thaliana (taxid:3702)]

 Score = 310 (114.2 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
 Identities = 56/75 (74%), Positives = 59/75 (78%)

Query:   290 SWGQVTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSSELH 349
             S G   RRC HC   KTPQWRTGP+G KTLCNACGVRYKSGRL PEYRPA SPTF    H
Sbjct:   213 SGGAEERRCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLAKH 272

Query:   350 SNHHRKVMEMRRKKE 364
             SN HRKVME+RR+KE
Sbjct:   273 SNSHRKVMELRRQKE 287

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0009416 "response to light stimulus" evidence=IEP

TAIR|locus:2055589 GATA2 "GATA transcription factor 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 306 (112.8 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
 Identities = 54/69 (78%), Positives = 59/69 (85%)

Query:   296 RRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSSELHSNHHRK 355
             RRC+HC  +KTPQWRTGPLG KTLCNACGVR+KSGRL PEYRPA SPTF    HSN HRK
Sbjct:   179 RRCTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFVLTQHSNSHRK 238

Query:   356 VMEMRRKKE 364
             VME+RR+KE
Sbjct:   239 VMELRRQKE 247

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS;IDA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0009416 "response to light stimulus" evidence=IEP

TAIR|locus:2139594 GATA3 "GATA transcription factor 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 317 (116.6 bits), Expect = 3.1e-35, Sum P(2) = 3.1e-35
 Identities = 59/79 (74%), Positives = 66/79 (83%)

Query:   296 RRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSSELHSNHHRK 355
             RRCSHCG   TPQWRTGP+G KTLCNACGVR+KSGRL PEYRPA SPTFS+E+HSN HRK
Sbjct:   180 RRCSHCGTNNTPQWRTGPVGPKTLCNACGVRFKSGRLCPEYRPADSPTFSNEIHSNLHRK 239

Query:   356 VMEMRRKKEGLGRTEPGLA 374
             V+E+R+ KE LG  E G A
Sbjct:   240 VLELRKSKE-LGE-ETGEA 256

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0005730 "nucleolus" evidence=IDA

GO:0007623 "circadian rhythm" evidence=IEP

TAIR|locus:2076191 GATA1 "GATA transcription factor 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 305 (112.4 bits), Expect = 4.3e-32, Sum P(2) = 4.3e-32
 Identities = 51/67 (76%), Positives = 59/67 (88%)

Query:   296 RRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSSELHSNHHRK 355
             R+C HCG +KTPQWR GP G KTLCNACGVRYKSGRL PEYRPA SPTF++ELHSN HRK
Sbjct:   194 RKCQHCGAEKTPQWRAGPAGPKTLCNACGVRYKSGRLVPEYRPANSPTFTAELHSNSHRK 253

Query:   356 VMEMRRK 362
             ++EMR++
Sbjct:   254 IVEMRKQ 260

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

GO:0007623 "circadian rhythm" evidence=IEP

TAIR|locus:2082637 BME3 "BLUE MICROPYLAR END 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 301 (111.0 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
 Identities = 52/68 (76%), Positives = 57/68 (83%)

Query:   296 RRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSSELHSNHHRK 355
             R+C HC V KTPQWR GP+G KTLCNACGVRYKSGRLFPEYRPA SPTF+  LHSN H+K
Sbjct:   229 RKCMHCEVTKTPQWRLGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFTPALHSNSHKK 288

Query:   356 VMEMRRKK 363
             V EMR K+
Sbjct:   289 VAEMRNKR 296

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0009845 "seed germination" evidence=IMP

GO:0007623 "circadian rhythm" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9FH57	GATA5_ARATH	No assigned EC number	0.5224	0.8320	0.9351	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00570125 hypothetical protein (333 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	381
pfam00320	36	pfam00320, GATA, GATA zinc finger	6e-15
smart00401	52	smart00401, ZnF_GATA, zinc finger binding to DNA c	3e-14
cd00202	54	cd00202, ZnF_GATA, Zinc finger DNA binding domain;	4e-13

>gnl|CDD|109380 pfam00320, GATA, GATA zinc finger

 Score = 67.7 bits (166), Expect = 6e-15
 Identities = 21/35 (60%), Positives = 25/35 (71%)

Query: 298 CSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRL 332
           CS+CG  KTP WR GP G +TLCNACG+ Y+   L
Sbjct: 1   CSNCGTTKTPLWRRGPDGNRTLCNACGLYYRKHGL 35

This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contains a single copy of the domain. Length = 36

>gnl|CDD|214648 smart00401, ZnF_GATA, zinc finger binding to DNA consensus sequence [AT]GATA[AG]

 Score = 66.3 bits (162), Expect = 3e-14
 Identities = 24/52 (46%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 295 TRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSS 346
            R CS+CG  +TP WR GP G KTLCNACG+ YK        RP        
Sbjct: 3   GRSCSNCGTTETPLWRRGPSGNKTLCNACGLYYKKHGG--LKRPLSLKKDGI 52

Length = 52

>gnl|CDD|238123 cd00202, ZnF_GATA, Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C

 Score = 63.2 bits (154), Expect = 4e-13
 Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 3/49 (6%)

Query: 297 RCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFS 345
            CS+CG   TP WR GP G  TLCNACG+ +K        RP       
Sbjct: 1   ACSNCGTTTTPLWRRGPSGGSTLCNACGLYWKKHG---VMRPLSKRKKD 46

Length = 54

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	381
cd00202	54	ZnF_GATA Zinc finger DNA binding domain; binds spe	99.48
smart00401	52	ZnF_GATA zinc finger binding to DNA consensus sequ	99.44
PF00320	36	GATA: GATA zinc finger; InterPro: IPR000679 Zinc f	99.4
KOG1601	340	consensus GATA-4/5/6 transcription factors [Transc	99.12
COG5641	498	GAT1 GATA Zn-finger-containing transcription facto	97.8
KOG3554	693	consensus Histone deacetylase complex, MTA1 compon	88.98

>cd00202 ZnF_GATA Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C

Probab=99.48  E-value=2.3e-14  Score=108.50  Aligned_cols=43  Identities=49%  Similarity=1.042  Sum_probs=38.0

Q ss_pred             ccccCCCCCCCcccCCCCCCchhhhhhhhhHHhCCCCCCCCCCCCC
Q 044150          297 RCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSP  342 (381)
Q Consensus       297 ~Cs~Cgt~~TP~WRrGP~G~~tLCNACGl~ykkgrllp~yrpa~sP  342 (381)
                      .|+||++++||+||+||.|.++||||||+||++++   ..||...+
T Consensus         1 ~C~~C~~~~Tp~WR~g~~~~~~LCNaCgl~~~k~~---~~rp~~~~   43 (54)
T cd00202           1 ACSNCGTTTTPLWRRGPSGGSTLCNACGLYWKKHG---VMRPLSKR   43 (54)
T ss_pred             CCCCCCCCCCcccccCCCCcchHHHHHHHHHHhcC---CCCCcccC
Confidence            59999999999999999888999999999999876   56776544

>smart00401 ZnF_GATA zinc finger binding to DNA consensus sequence [AT]GATA[AG]

Probab=99.44  E-value=6e-14  Score=105.17  Aligned_cols=39  Identities=56%  Similarity=1.152  Sum_probs=35.9

Q ss_pred             CcccccCCCCCCCcccCCCCCCchhhhhhhhhHHhCCCC
Q 044150          295 TRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLF  333 (381)
Q Consensus       295 ~r~Cs~Cgt~~TP~WRrGP~G~~tLCNACGl~ykkgrll  333 (381)
                      .++|+||+++.||+||+||.|..+|||||||+|++.+.+
T Consensus         3 ~~~C~~C~~~~T~~WR~g~~g~~~LCnaCgl~~~k~~~~   41 (52)
T smart00401        3 GRSCSNCGTTETPLWRRGPSGNKTLCNACGLYYKKHGGL   41 (52)
T ss_pred             CCCcCCCCCCCCCccccCCCCCCcEeecccHHHHHcCCC
Confidence            578999999999999999999889999999999986644

>PF00320 GATA: GATA zinc finger; InterPro: IPR000679 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=99.40  E-value=5e-14  Score=98.45  Aligned_cols=35  Identities=60%  Similarity=1.257  Sum_probs=28.1

Q ss_pred             cccCCCCCCCcccCCCCCCchhhhhhhhhHHhCCC
Q 044150          298 CSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRL  332 (381)
Q Consensus       298 Cs~Cgt~~TP~WRrGP~G~~tLCNACGl~ykkgrl  332 (381)
                      |.||++++||+||+||.|..+||||||++|++.+.
T Consensus         1 C~~C~tt~t~~WR~~~~g~~~LCn~Cg~~~kk~~~   35 (36)
T PF00320_consen    1 CSNCGTTETPQWRRGPNGNRTLCNACGLYYKKYGK   35 (36)
T ss_dssp             -TTT--ST-SSEEEETTSEE-EEHHHHHHHHHHSS
T ss_pred             CcCCcCCCCchhhcCCCCCCHHHHHHHHHHHHhCC
Confidence            89999999999999999988899999999998763

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents GATA-type zinc fingers (Znf). A number of transcription factors (including erythroid-specific transcription factor and nitrogen regulatory proteins), specifically bind the DNA sequence (A/T)GATA(A/G) [] in the regulatory regions of genes. They are consequently termed GATA-binding transcription factors. The interactions occur via highly-conserved Znf domains in which the zinc ion is coordinated by 4 cysteine residues [, ]. NMR studies have shown the core of the Znf to comprise 2 irregular anti-parallel beta-sheets and an alpha-helix, followed by a long loop to the C-terminal end of the finger. The N-terminal part, which includes the helix, is similar in structure, but not sequence, to the N-terminal zinc module of the glucocorticoid receptor DNA-binding domain. The helix and the loop connecting the 2 beta-sheets interact with the major groove of the DNA, while the C-terminal tail wraps around into the minor groove. It is this tail that is the essential determinant of specific binding. Interactions between the Znf and DNA are mainly hydrophobic, explaining the preponderance of thymines in the binding site; a large number of interactions with the phosphate backbone have also been observed []. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contains a single copy of the domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0008270 zinc ion binding, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 3GAT_A 2GAT_A 1GAU_A 1GAT_A 1Y0J_A 1GNF_A 2L6Z_A 2L6Y_A 3DFV_D 3DFX_B ....

>KOG1601 consensus GATA-4/5/6 transcription factors [Transcription]

Probab=99.12  E-value=4.8e-11  Score=105.22  Aligned_cols=71  Identities=61%  Similarity=1.172  Sum_probs=62.3

Q ss_pred             CcccccCCCCCCCcccCCCCCCchhhhhhhhhHHhC---CCCCCCCCCCCCC--------------Cccchhhc------
Q 044150          295 TRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSG---RLFPEYRPACSPT--------------FSSELHSN------  351 (381)
Q Consensus       295 ~r~Cs~Cgt~~TP~WRrGP~G~~tLCNACGl~ykkg---rllp~yrpa~sPt--------------~~~~~hsn------  351 (381)
                      ...|.+|+++.||+||+++.|.+.+|||||++|+++   +.++.++.+..++              +....+.+      
T Consensus       199 ~~~c~~~~~~~t~~~r~~~~g~~~~cnacgl~~k~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (340)
T KOG1601|consen  199 LRQCSNCGTTKTPLWRRGPEGPKSLCNACGLRYKKGGVRRPLPEKRPASSPRNVSPKGSGAVKGRTFTKSLHSNSAQLLL  278 (340)
T ss_pred             CcccCCCCCCCCcceecCCCCCccccccchhhhhhcCccccccccCccccccccCCCccccccCCCCCcccccchhhhhh
Confidence            589999999999999999999999999999999998   7889999888877              45566665      


Q ss_pred             -----------hhhHHHHHHHhhcC
Q 044150          352 -----------HHRKVMEMRRKKEG  365 (381)
Q Consensus       352 -----------~hrkvie~Rr~k~~  365 (381)
                                 .+.++.+++|.++.
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~r~~~~  303 (340)
T KOG1601|consen  279 APSKSEPPLLSSHQRVAEVRRYRES  303 (340)
T ss_pred             hhcccCccccccchHHHHHhhccCc
Confidence                       78899999988774

>COG5641 GAT1 GATA Zn-finger-containing transcription factor [Transcription]

Probab=97.80  E-value=9e-06  Score=85.07  Aligned_cols=53  Identities=32%  Similarity=0.575  Sum_probs=40.2

Q ss_pred             CCCcccccCCCCCCCcccCCCCC----CchhhhhhhhhHHhCCCCCCCC-CCCCCCCccch
Q 044150          293 QVTRRCSHCGVQKTPQWRTGPLG----AKTLCNACGVRYKSGRLFPEYR-PACSPTFSSEL  348 (381)
Q Consensus       293 ~~~r~Cs~Cgt~~TP~WRrGP~G----~~tLCNACGl~ykkgrllp~yr-pa~sPt~~~~~  348 (381)
                      .....|.||.+..||+|||+..+    .-+|||||||+|+-.+   ..| |...++.....
T Consensus       156 ~~~~vc~Nc~t~stPlwrR~~~~~s~~~n~lcnaCgl~~klhg---~~r~P~t~ks~~~ks  213 (498)
T COG5641         156 NQPHVCSNCKTTSTPLWRRASSESSLPGNNLCNACGLYLKLHG---SPRAPISLKSDSIKS  213 (498)
T ss_pred             cccchhccccccCCccccccccccccCCccccccccccccccC---CcCCCcccccccccc
Confidence            34459999999999999999993    3799999999999544   344 66555444433

>KOG3554 consensus Histone deacetylase complex, MTA1 component [Chromatin structure and dynamics]

Probab=88.98  E-value=0.4  Score=51.14  Aligned_cols=38  Identities=29%  Similarity=0.579  Sum_probs=31.8

Q ss_pred             CCCCcccccCCCCCCCcc--cCCCCCCchhhhhhhhhHHh
Q 044150          292 GQVTRRCSHCGVQKTPQW--RTGPLGAKTLCNACGVRYKS  329 (381)
Q Consensus       292 ~~~~r~Cs~Cgt~~TP~W--RrGP~G~~tLCNACGl~ykk  329 (381)
                      .+..+.|.+|++++.-+|  .-+|.-...||-.|-+||||
T Consensus       383 ~~~g~~CEsC~ttqs~qWYsWGppnmqcrLCasCWiyWKK  422 (693)
T KOG3554|consen  383 NQDGRACESCYTTQSLQWYSWGPPNMQCRLCASCWIYWKK  422 (693)
T ss_pred             CCCCCcccccccccccceeccCCCCccchhhHHHHHHHHH
Confidence            344789999999999999  44556666899999999998

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	381
2kae_A	71	GATA-type transcription factor; zinc finger, GATA-	1e-14
1gnf_A	46	Transcription factor GATA-1; zinc finger, transcri	3e-12
2vut_I	43	AREA, nitrogen regulatory protein AREA; transcript	3e-09
3dfx_A	63	Trans-acting T-cell-specific transcription factor	4e-08
4gat_A	66	Nitrogen regulatory protein AREA; DNA binding prot	5e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>2kae_A GATA-type transcription factor; zinc finger, GATA-type, DNA; NMR {Caenorhabditis elegans} Length = 71

 Score = 67.6 bits (165), Expect = 1e-14
 Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 3/47 (6%)

Query: 293 QVTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPA 339
           + + +CS+C V +T +WR         CNAC +  +    + + RP 
Sbjct: 6   KKSFQCSNCSVTETIRWRNIRSKEGIQCNACFIYQR---KYNKTRPV 49

>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A Length = 46

 Score = 59.7 bits (145), Expect = 3e-12
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 292 GQVTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYK 328
           G   R C +CG   TP WR    G   LCNACG+ +K
Sbjct: 1   GSEARECVNCGATATPLWRRDRTG-HYLCNACGLYHK 36

>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I* Length = 43

 Score = 51.3 bits (123), Expect = 3e-09
 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)

Query: 296 RRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYK 328
             C++C  Q TP WR  P G + LCNACG+  K
Sbjct: 2   TTCTNCFTQTTPLWRRNPEG-QPLCNACGLFLK 33

>3dfx_A Trans-acting T-cell-specific transcription factor GATA-3; activator, DNA-binding, metal-binding, nucleus; HET: DNA; 2.70A {Mus musculus} PDB: 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* Length = 63

 Score = 48.5 bits (115), Expect = 4e-08
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 292 GQVTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYK 328
            +    C++C    T  WR    G   +CNACG+ YK
Sbjct: 4   RRAGTSCANCQTTTTTLWRRNANG-DPVCNACGLYYK 39

>4gat_A Nitrogen regulatory protein AREA; DNA binding protein, transcription factor, zinc binding domain, complex (transcription regulation/DNA); HET: DNA; NMR {Emericella nidulans} SCOP: g.39.1.1 PDB: 5gat_A* 6gat_A* 7gat_A* Length = 66

 Score = 48.5 bits (115), Expect = 5e-08
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 292 GQVTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYK 328
                 C++C  Q TP WR  P G + LCNACG+  K
Sbjct: 6   QNGPTTCTNCFTQTTPLWRRNPEG-QPLCNACGLFLK 41

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 59/410 (14%), Positives = 108/410 (26%), Gaps = 119/410 (29%)

Query: 17  TPIHLSATSLLSSPPPPPPPTDFQDMECVEAALKTSLRKEMALKLSPQAVDEICAVNLPN 76
           T +++     L +        +   ++     L+ +L     L+L P        V + +
Sbjct: 109 TRMYIEQRDRLYNDNQVFAKYNVSRLQPYLK-LRQAL-----LELRPAK-----NVLI-D 156

Query: 77  GV-----------ACDDFFVDDLLDF-----------SNEDVVAEQQQLQEPQQEKGEEQ 114
           GV            C  + V   +DF           S E V+   Q+L          +
Sbjct: 157 GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216

Query: 115 KKHTLTVCSKQDQDLDERLNFDDLGPIPTSELAVPTDDVANLEWLSHFVED--------- 165
             H+  +  +      E        P     L +   +V N +  + F  +         
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL--LNVQNAKAWNAF--NLSCKILLTT 272

Query: 166 ---SFAEYSSPFPAGTLPVKAKENG-AEPEHKPALA--IHCFKTPIPAKARSKRSRTGLR 219
                 ++ S      + +          E K  L   + C    +P +  +    T  R
Sbjct: 273 RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT----TNPR 328

Query: 220 IWSLGSPSLSDSSSTSSASSSSSPSSPWP-------VSTNPGSLASLRPAE--------- 263
             S+ + S+ D  +T            W         +    SL  L PAE         
Sbjct: 329 RLSIIAESIRDGLAT---------WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS 379

Query: 264 --PFIVKPPKKKLKKKSPPEGYNAGGNISWGQVTRRCSHCGVQKTPQWRTGPLGAKTLCN 321
             P     P   L              + W  V +      V K        L   +L  
Sbjct: 380 VFPPSAHIPTILLS-------------LIWFDVIKSDVMVVVNK--------LHKYSLVE 418

Query: 322 ACGVRYKSGR-----LFPEYRPACSPTFSSELHSNHHRKVMEMRRKKEGL 366
               + K        ++ E +         E     HR +++     +  
Sbjct: 419 K---QPKESTISIPSIYLELKVKL------ENEYALHRSIVDHYNIPKTF 459

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	381
3dfx_A	63	Trans-acting T-cell-specific transcription factor	99.59
1gnf_A	46	Transcription factor GATA-1; zinc finger, transcri	99.55
2vut_I	43	AREA, nitrogen regulatory protein AREA; transcript	99.54
2kae_A	71	GATA-type transcription factor; zinc finger, GATA-	99.51
4gat_A	66	Nitrogen regulatory protein AREA; DNA binding prot	99.45
4hc9_A	115	Trans-acting T-cell-specific transcription factor;	99.39
4hc9_A	115	Trans-acting T-cell-specific transcription factor;	99.12

>3dfx_A Trans-acting T-cell-specific transcription factor GATA-3; activator, DNA-binding, metal-binding, nucleus; HET: DNA; 2.70A {Mus musculus} PDB: 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A*

Probab=99.59  E-value=5.2e-16  Score=120.14  Aligned_cols=42  Identities=36%  Similarity=0.831  Sum_probs=37.5

Q ss_pred             CCcccccCCCCCCCcccCCCCCCchhhhhhhhhHHhCCCCCCCCCC
Q 044150          294 VTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPA  339 (381)
Q Consensus       294 ~~r~Cs~Cgt~~TP~WRrGP~G~~tLCNACGl~ykkgrllp~yrpa  339 (381)
                      ....|.||+++.||+||+||.|. +|||||||||++++.   +||.
T Consensus         6 ~~~~C~~C~tt~Tp~WR~gp~G~-~LCNACGl~~~~~~~---~RP~   47 (63)
T 3dfx_A            6 AGTSCANCQTTTTTLWRRNANGD-PVCNACGLYYKLHNI---NRPL   47 (63)
T ss_dssp             TTCCCTTTCCSCCSSCCCCTTSC-CCCHHHHHHHHHHSS---CCCG
T ss_pred             CCCcCCCcCCCCCCccCCCCCCC-chhhHHHHHHHHcCC---CCCc
Confidence            45789999999999999999996 999999999998774   5664

>1gnf_A Transcription factor GATA-1; zinc finger, transcription regulation; NMR {Mus musculus} SCOP: g.39.1.1 PDB: 1y0j_A 2l6y_A 2l6z_A

Probab=99.55  E-value=2.4e-15  Score=110.02  Aligned_cols=39  Identities=41%  Similarity=0.824  Sum_probs=35.3

Q ss_pred             CCcccccCCCCCCCcccCCCCCCchhhhhhhhhHHhCCCC
Q 044150          294 VTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLF  333 (381)
Q Consensus       294 ~~r~Cs~Cgt~~TP~WRrGP~G~~tLCNACGl~ykkgrll  333 (381)
                      ..+.|.||++++||+||+||.|. +|||||||||++++..
T Consensus         3 ~~~~C~~C~tt~Tp~WR~gp~G~-~LCNaCGl~~k~~~~~   41 (46)
T 1gnf_A            3 EARECVNCGATATPLWRRDRTGH-YLCNACGLYHKMNGQN   41 (46)
T ss_dssp             CSCCCTTTCCCCCSSCBCCTTCC-CBCSHHHHHHHHTCSC
T ss_pred             CCCCCCCcCCCCCCcCccCCCCC-ccchHHHHHHHHcCCC
Confidence            46889999999999999999996 9999999999987643

>2vut_I AREA, nitrogen regulatory protein AREA; transcription regulation, protein-protein interactions, metal-binding, nitrate assimilation; HET: NAD; 2.3A {Emericella nidulans} SCOP: g.39.1.1 PDB: 2vus_I* 2vuu_I*

Probab=99.54  E-value=1.3e-15  Score=109.92  Aligned_cols=37  Identities=43%  Similarity=0.908  Sum_probs=34.0

Q ss_pred             cccccCCCCCCCcccCCCCCCchhhhhhhhhHHhCCCC
Q 044150          296 RRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLF  333 (381)
Q Consensus       296 r~Cs~Cgt~~TP~WRrGP~G~~tLCNACGl~ykkgrll  333 (381)
                      +.|.||++++||+||+||+|. +|||||||||++++.+
T Consensus         2 ~~C~~C~tt~Tp~WR~gp~G~-~LCNaCGl~~k~~~~~   38 (43)
T 2vut_I            2 TTCTNCFTQTTPLWRRNPEGQ-PLCNACGLFLKLHGVV   38 (43)
T ss_dssp             CCCSSSCCCCCSCCEECTTSC-EECHHHHHHHHHHSSC
T ss_pred             CcCCccCCCCCCccccCCCCC-cccHHHHHHHHHhCCC
Confidence            579999999999999999996 9999999999987743

>2kae_A GATA-type transcription factor; zinc finger, GATA-type, DNA; NMR {Caenorhabditis elegans}

Probab=99.51  E-value=5.2e-15  Score=116.94  Aligned_cols=43  Identities=30%  Similarity=0.565  Sum_probs=35.2

Q ss_pred             CCcccccCCCCCCCcccCCCCCCchhhhhhhhhHHhCCCCCCCCCC
Q 044150          294 VTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPA  339 (381)
Q Consensus       294 ~~r~Cs~Cgt~~TP~WRrGP~G~~tLCNACGl~ykkgrllp~yrpa  339 (381)
                      ....|+||++++||+||+|+.+.++|||||||||++++   .+||.
T Consensus         7 ~~~~C~nC~tt~Tp~WRrg~~~~g~LCNACGl~~~~~~---~~RP~   49 (71)
T 2kae_A            7 KSFQCSNCSVTETIRWRNIRSKEGIQCNACFIYQRKYN---KTRPV   49 (71)
T ss_dssp             -CCCCSSSCCSCCSSCCCCSSSSCCCSSHHHHHHHHHH---SCCCT
T ss_pred             CCCcCCccCCCCCCccccCCCCCCccchHHHHHHHHhC---CCCCc
Confidence            46899999999999999965554599999999999765   35664

>4gat_A Nitrogen regulatory protein AREA; DNA binding protein, transcription factor, zinc binding domain, complex (transcription regulation/DNA); HET: DNA; NMR {Emericella nidulans} SCOP: g.39.1.1 PDB: 5gat_A* 6gat_A* 7gat_A*

Probab=99.45  E-value=1.5e-14  Score=112.89  Aligned_cols=42  Identities=43%  Similarity=0.853  Sum_probs=36.9

Q ss_pred             CCcccccCCCCCCCcccCCCCCCchhhhhhhhhHHhCCCCCCCCCC
Q 044150          294 VTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPA  339 (381)
Q Consensus       294 ~~r~Cs~Cgt~~TP~WRrGP~G~~tLCNACGl~ykkgrllp~yrpa  339 (381)
                      ..+.|.||++++||+||+||.|. +|||||||||++++.   .||.
T Consensus         8 ~~~~C~~C~t~~Tp~WR~gp~G~-~LCNaCGl~~~~~~~---~RP~   49 (66)
T 4gat_A            8 GPTTCTNCFTQTTPLWRRNPEGQ-PLCNACGLFLKLHGV---VRPL   49 (66)
T ss_dssp             SSCCCTTTCCCCCSSCEEETTTE-EECHHHHHHHHHHCS---CCCG
T ss_pred             CCCCCCCCCCCCCCcCCcCCCCC-CccHHHHHHHHHcCC---CCch
Confidence            46899999999999999999995 999999999997664   4554

>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A

Probab=99.39  E-value=1.4e-13  Score=116.96  Aligned_cols=39  Identities=33%  Similarity=0.792  Sum_probs=35.5

Q ss_pred             CCcccccCCCCCCCcccCCCCCCchhhhhhhhhHHhCCCC
Q 044150          294 VTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLF  333 (381)
Q Consensus       294 ~~r~Cs~Cgt~~TP~WRrGP~G~~tLCNACGl~ykkgrll  333 (381)
                      ....|+||+++.||+||+||+| ++|||||||||++++..
T Consensus        58 ~~~~C~~C~t~~tp~WRr~~~g-~~lCNaCgl~~~~~~~~   96 (115)
T 4hc9_A           58 AGTSCANCQTTTTTLWRRNANG-DPVCNACGLYYKLHNIN   96 (115)
T ss_dssp             TTCCCTTTCCSCCSSCEECTTS-CEECHHHHHHHHHHSSC
T ss_pred             ccccCCCcCCCCcceeEECCCC-CCcchHHHHHHHHhCCC
Confidence            3589999999999999999999 89999999999987643

>4hc9_A Trans-acting T-cell-specific transcription factor; zinc finger, GATA transcription factor, DNA bridging, transc DNA complex; HET: DNA; 1.60A {Homo sapiens} PDB: 4hc7_A* 4hca_A* 3dfx_A* 3dfv_D* 2gat_A* 3gat_A* 1gat_A* 1gau_A* 1gnf_A 1y0j_A 2l6y_A 2l6z_A

Probab=99.12  E-value=2e-11  Score=103.64  Aligned_cols=37  Identities=43%  Similarity=0.937  Sum_probs=32.8

Q ss_pred             CCcccccCCCCCCCcccCCCCCCchhhhhhhhhHHhCC
Q 044150          294 VTRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGR  331 (381)
Q Consensus       294 ~~r~Cs~Cgt~~TP~WRrGP~G~~tLCNACGl~ykkgr  331 (381)
                      ..+.|.|||++.||+||+|+.| .+|||||||||+.++
T Consensus         4 ~~~~C~~Cg~~~Tp~WRr~~~g-~~lCnaCgl~~Kl~G   40 (115)
T 4hc9_A            4 MGRECVNCGATSTPLWRRDGTG-HYLCNACGLYHKMNG   40 (115)
T ss_dssp             --CCCTTTCCSCCSSCEECTTS-CEECHHHHHHHHHHS
T ss_pred             CCCCCCCCCCccCCcceECCCC-CCcCcchhhhhhhcc
Confidence            4689999999999999999999 799999999998644

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	381
d1y0ja1	39	g.39.1.1 (A:200-238) Erythroid transcription facto	4e-14
d3gata_	66	g.39.1.1 (A:) Erythroid transcription factor GATA-	4e-11
d2vuti1	42	g.39.1.1 (I:671-712) Erythroid transcription facto	5e-11

>d1y0ja1 g.39.1.1 (A:200-238) Erythroid transcription factor GATA-1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 39

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.6 bits (155), Expect = 4e-14
 Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 296 RRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYK 328
           R C +CG   TP WR    G   LCNACG+ +K
Sbjct: 3   RECVNCGATATPLWRRDRTG-HYLCNACGLYHK 34

>d3gata_ g.39.1.1 (A:) Erythroid transcription factor GATA-1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 66

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 56.1 bits (135), Expect = 4e-11
 Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 7/69 (10%)

Query: 296 RRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSSELHSNHHRK 355
             CS+C    T  WR  P+G   +CNACG+ YK  ++    RP    T   +     +RK
Sbjct: 5   TVCSNCQTSTTTLWRRSPMG-DPVCNACGLYYKLHQV---NRP---LTMRKDGIQTRNRK 57

Query: 356 VMEMRRKKE 364
           V    +K+ 
Sbjct: 58  VSSKGKKRR 66

>d2vuti1 g.39.1.1 (I:671-712) Erythroid transcription factor GATA-1 {Emericella nidulans [TaxId: 162425]} Length = 42

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Emericella nidulans [TaxId: 162425]

 Score = 54.8 bits (132), Expect = 5e-11
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 4/42 (9%)

Query: 298 CSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPA 339
           C++C  Q TP WR  P G + LCNACG+  K   L    RP 
Sbjct: 3   CTNCFTQTTPLWRRNPEG-QPLCNACGLFLK---LHGVVRPL 40

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	381
d1y0ja1	39	Erythroid transcription factor GATA-1 {Mouse (Mus	99.62
d2vuti1	42	Erythroid transcription factor GATA-1 {Emericella	99.58
d3gata_	66	Erythroid transcription factor GATA-1 {Chicken (Ga	99.54

>d1y0ja1 g.39.1.1 (A:200-238) Erythroid transcription factor GATA-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.62  E-value=3.6e-17  Score=114.47  Aligned_cols=36  Identities=44%  Similarity=0.966  Sum_probs=33.5

Q ss_pred             CcccccCCCCCCCcccCCCCCCchhhhhhhhhHHhCC
Q 044150          295 TRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGR  331 (381)
Q Consensus       295 ~r~Cs~Cgt~~TP~WRrGP~G~~tLCNACGl~ykkgr  331 (381)
                      .++|.||++++||+||+||.| ++|||||||||+.++
T Consensus         2 ~r~C~~Cgtt~Tp~WR~gp~G-~~LCNACGl~~r~~G   37 (39)
T d1y0ja1           2 ARECVNCGATATPLWRRDRTG-HYLCNACGLYHKMNG   37 (39)
T ss_dssp             CCCCSSSCCCCCSCCEECTTS-CEECSSHHHHHHHSC
T ss_pred             cCCCCCCCCCCCcccccCCCC-CEeeHHhHHHHHHhC
Confidence            578999999999999999999 799999999999765

>d2vuti1 g.39.1.1 (I:671-712) Erythroid transcription factor GATA-1 {Emericella nidulans [TaxId: 162425]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Emericella nidulans [TaxId: 162425]

Probab=99.58  E-value=1.4e-16  Score=113.03  Aligned_cols=39  Identities=46%  Similarity=0.930  Sum_probs=34.2

Q ss_pred             ccccCCCCCCCcccCCCCCCchhhhhhhhhHHhCCCCCCCCCC
Q 044150          297 RCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPA  339 (381)
Q Consensus       297 ~Cs~Cgt~~TP~WRrGP~G~~tLCNACGl~ykkgrllp~yrpa  339 (381)
                      .|+||++++||+||+||.| ++|||||||||++++   ..||.
T Consensus         2 ~C~nC~tt~Tp~WRr~~~G-~~lCNACGl~~k~~g---~~RP~   40 (42)
T d2vuti1           2 TCTNCFTQTTPLWRRNPEG-QPLCNACGLFLKLHG---VVRPL   40 (42)
T ss_dssp             CCSSSCCCCCSCCEECTTS-CEECHHHHHHHHHHS---SCCCC
T ss_pred             cCCCCCCCCCccceeCCCC-CCchhhhhHHHHHcC---CCCCC
Confidence            5999999999999999999 799999999998654   45564

>d3gata_ g.39.1.1 (A:) Erythroid transcription factor GATA-1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Small proteins
fold: Glucocorticoid receptor-like (DNA-binding domain)
superfamily: Glucocorticoid receptor-like (DNA-binding domain)
family: Erythroid transcription factor GATA-1
domain: Erythroid transcription factor GATA-1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.54  E-value=2.6e-16  Score=121.07  Aligned_cols=41  Identities=41%  Similarity=0.960  Sum_probs=35.7

Q ss_pred             CcccccCCCCCCCcccCCCCCCchhhhhhhhhHHhCCCCCCCCCC
Q 044150          295 TRRCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPA  339 (381)
Q Consensus       295 ~r~Cs~Cgt~~TP~WRrGP~G~~tLCNACGl~ykkgrllp~yrpa  339 (381)
                      ...|+||++++||+||+||.| ++|||||||||++++.   .||.
T Consensus         4 g~~C~nCgt~~Tp~WRr~~~G-~~lCNACGl~~~~~~~---~RP~   44 (66)
T d3gata_           4 GTVCSNCQTSTTTLWRRSPMG-DPVCNACGLYYKLHQV---NRPL   44 (66)
T ss_dssp             TCCCTTTCCCCCSSEEECTTS-CEEEHHHHHHHHHHCS---CCCG
T ss_pred             CCCCCCCCCCCCcccccCCCC-CcccchhHHHHHHhCC---cCCc
Confidence            367999999999999999999 7999999999997653   4553