Citrus Sinensis ID: 044257

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------
MAPTNGSTVVTESWDIVDFVIHKGHGVKGLSEKGLKSLPKQFHQPLEERFSEKRILDQSPEVAKFICDAAENWGFFQIVNHGVALEVLERVKEATHRFFALPAEEKRKYSKENSPTKNVRYGSSFAPHVERALEWKDFLSLFYVSEEETSAFWPLVCKDEMLEYMRSSEDDIGGLHVRKDNGTGWIHAAPISGSLIINIGDALQIMSNGRNKSIEHCVIANGSQNRISVPLFVNPKPEAILCPFPEVLANGEKPLYKPVLYADYSRHFYTKAHDGKKTIDFAKISDI
cccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHccccccccccEEEcccccHHHHHHcccccccccccccccccccccccccHHHHHHHHHHccccccccEEEEccccccEEcccccccEEEEcccEEEEEEccccccccccEEEcccccEEEEEEccccccccEEEccccccccccccccccccHHHHHHHHHHccccccccccccccccc
ccccccccccccccHHHHHcccccccHHHHHHcccccccHHcEccccHcccccccccccHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHEcEHHHcEccEEEccccccccccccccEEEEEEEEcHHHcccccccccccHEccccccccccccEEEEEEccccEEEEccccccEEEEEEccHEEEEEcccEEEEEEEEEEEccccEEEEEEEEccccccEEcccHHHcccccccccccccHHHHHHHHHHcccccHHHHHHHcHccc
maptngstvvteswDIVDFVIHkghgvkglsekglkslpkqfhqpleerfsekrildqsPEVAKFICDAAENWGFFQIVNHGVALEVLERVKEATHRFFalpaeekrkyskensptknvrygssfaphVERALEWKDFLSLFYvseeetsafwplvcKDEMLEYMRsseddigglhvrkdngtgwihaapisgsliINIGDALQImsngrnksIEHCVIAngsqnrisvplfvnpkpeailcpfpevlangekplykpvlyadysrhfytkahdgkktidfakisdi
maptngstvvteswdIVDFVIHKGHGVKGLSEKGLKSLPKQFHQPLEERFSEKRILDQSPEVAKFICDAAENWGFFQIVNHGVALEVLERVKEATHRffalpaeekrkyskensptknvrygssFAPHVERALEWKDFLSLFYVSEeetsafwplVCKDEMLEYMRSSEDDIGGLHVRKDNGTGWIHAAPISGSLIINIGDALQIMSNGRNKSIEHCVIANGSQNRISVPLFVNPKPEAILCPFPEVLANGEKPLYKPVLYADYSRHFYtkahdgkktidfakisdi
MAPTNGSTVVTESWDIVDFVIHKGHGVKGLSEKGLKSLPKQFHQPLEERFSEKRILDQSPEVAKFICDAAENWGFFQIVNHGVALEVLERVKEATHRFFALPAEEKRKYSKENSPTKNVRYGSSFAPHVERALEWKDFLSLFYVSEEETSAFWPLVCKDEMLEYMRSSEDDIGGLHVRKDNGTGWIHAAPISGSLIINIGDALQIMSNGRNKSIEHCVIANGSQNRISVPLFVNPKPEAILCPFPEVLANGEKPLYKPVLYADYSRHFYTKAHDGKKTIDFAKISDI
********VVTESWDIVDFVIHKGHGVKGL*****************************PEVAKFICDAAENWGFFQIVNHGVALEVLERVKEATHRFFAL********************GSSFAPHVERALEWKDFLSLFYVSEEETSAFWPLVCKDEMLEYMRSSEDDIGGLHVRKDNGTGWIHAAPISGSLIINIGDALQIMSNGRNKSIEHCVIANGSQNRISVPLFVNPKPEAILCPFPEVLANGEKPLYKPVLYADYSRHFYTKAHDGKKTIDF******
******************FVIHKGHGVKGLSEKGLKSLPKQFHQ****************EVAKFICDAAENWGFFQIVNHGVALEVLERVKEATHRFFALPAEEKRKYSKENSPTKNVRYGSSFAPHVERALEWKDFLSLFYVSEEETSAFWPLVCKDEMLEYMRSSEDDIGGLHVRKDNGTGWIHAAPISGSLIINIGDALQIMSNGRNKSIEHCVIANGSQNRISVPLFVNPKPEAILCPFPEVLANGEKPLYKPVLYADYSRHFYTKAHDGKKTIDFAKISD*
*********VTESWDIVDFVIHKGHGVKGLSEKGLKSLPKQFHQPLEERFSEKRILDQSPEVAKFICDAAENWGFFQIVNHGVALEVLERVKEATHRFFALPAEEK********PTKNVRYGSSFAPHVERALEWKDFLSLFYVSEEETSAFWPLVCKDEMLEYMRSSEDDIGGLHVRKDNGTGWIHAAPISGSLIINIGDALQIMSNGRNKSIEHCVIANGSQNRISVPLFVNPKPEAILCPFPEVLANGEKPLYKPVLYADYSRHFYTKAHDGKKTIDFAKISDI
***************IVDFVIHKGHGVKGLSEKGLKSLPKQFHQPLEERFSEKRILDQSPEVAKFICDAAENWGFFQIVNHGVALEVLERVKEATHRFFALPAEEKRKYSKENSPTKNVRYGSSFAPHVERALEWKDFLSLFYVSEEETSAFWPLVCKDEMLEYMRSSEDDIGGLHVRKDNGTGWIHAAPISGSLIINIGDALQIMSNGRNKSIEHCVIANGSQNRISVPLFVNPKPEAILCPFPEVLANGEKPLYKPVLYADYSRHFYTKAHDGKKTIDFAKISDI
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MAPTNGSTVVTESWDIVDFVIHKGHGVKGLSEKGLKSLPKQFHQPLEERFSEKRILDQSPEVAKFICDAAENWGFFQIVNHGVALEVLERVKEATHRFFALPAEEKRKYSKENSPTKNVRYGSSFAPHVERALEWKDFLSLFYVSEEETSAFWPLVCKDEMLEYMRSSEDDIGGLHVRKDNGTGWIHAAPISGSLIINIGDALQIMSNGRNKSIEHCVIANGSQNRISVPLFVNPKPEAILCPFPEVLANGEKPLYKPVLYADYSRHFYTKAHDGKKTIDFAKISDI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query287 2.2.26 [Sep-21-2011]
Q9LHN8361 Feruloyl CoA ortho-hydrox yes no 0.989 0.786 0.462 5e-89
Q9C899361 Feruloyl CoA ortho-hydrox no no 0.937 0.745 0.475 5e-88
A2A1A0352 S-norcoclaurine synthase N/A no 0.874 0.713 0.297 1e-27
O04395291 Flavonol synthase/flavano N/A no 0.700 0.690 0.262 1e-21
Q05965357 Naringenin,2-oxoglutarate N/A no 0.703 0.565 0.254 4e-21
Q9S818358 Naringenin,2-oxoglutarate no no 0.703 0.564 0.254 5e-21
Q05963356 Naringenin,2-oxoglutarate N/A no 0.651 0.525 0.251 1e-19
Q07353369 Naringenin,2-oxoglutarate N/A no 0.721 0.560 0.261 1e-18
P54847320 1-aminocyclopropane-1-car N/A no 0.696 0.625 0.272 2e-18
Q84MB3365 1-aminocyclopropane-1-car no no 0.867 0.682 0.26 2e-18
>sp|Q9LHN8|F6H1_ARATH Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana GN=F6'H1 PE=1 SV=1 Back     alignment and function desciption
 Score =  327 bits (839), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 167/361 (46%), Positives = 224/361 (62%), Gaps = 77/361 (21%)

Query: 1   MAPTNGSTVVTESWDIVDFVIHKGHGVKGLSEKGLKSLPKQFHQPLEERFSEK------- 53
           MAPT  +T  +   ++ DFV++KG+GVKGLSE G+K+LP+Q+ QPLEER   K       
Sbjct: 1   MAPTLLTTQFSNPAEVTDFVVYKGNGVKGLSETGIKALPEQYIQPLEERLINKFVNETDE 60

Query: 54  --RILDQS----PEVAKFICDAAENWGFFQIVNHGVALEVLERVKEATHRFFALPAEEKR 107
              ++D S      VA+ +CDAAE WGFFQ++NHGV LEVL+ VK ATH+FF LP EEKR
Sbjct: 61  AIPVIDMSNPDEDRVAEAVCDAAEKWGFFQVINHGVPLEVLDDVKAATHKFFNLPVEEKR 120

Query: 108 KYSKENSPTKNVRYGSSFAPHVERALEWKDFLSLFYVSEEETSAFWPLVCKDEMLEYMRS 167
           K++KENS +  VR+G+SF+P  E+ALEWKD+LSLF+VSE E   FWP +C++E LEY+  
Sbjct: 121 KFTKENSLSTTVRFGTSFSPLAEQALEWKDYLSLFFVSEAEAEQFWPDICRNETLEYINK 180

Query: 168 SE-----------------------------------------------------DDIGG 174
           S+                                                      D+  
Sbjct: 181 SKKMVRRLLEYLGKNLNVKELDETKESLFMGSIRVNLNYYPICPNPDLTVGVGRHSDVSS 240

Query: 175 LHVRKDNGTGWIH-----------AAPISGSLIINIGDALQIMSNGRNKSIEHCVIANGS 223
           L +   +  G +H             P++GS +INIGDA+QIMSNG  KS+EH V+ANG 
Sbjct: 241 LTILLQDQIGGLHVRSLASGNWVHVPPVAGSFVINIGDAMQIMSNGLYKSVEHRVLANGY 300

Query: 224 QNRISVPLFVNPKPEAILCPFPEVLANGEKPLYKPVLYADYSRHFYTKAHDGKKTIDFAK 283
            NRISVP+FVNPKPE+++ P PEV+ANGE+P+Y+ VLY+DY ++F+ KAHDGKKT+D+AK
Sbjct: 301 NNRISVPIFVNPKPESVIGPLPEVIANGEEPIYRDVLYSDYVKYFFRKAHDGKKTVDYAK 360

Query: 284 I 284
           I
Sbjct: 361 I 361
2-oxoglutarate (OG)- and Fe(II)-dependent dioxygenase (2OGD)involved in scopoletin biosynthesis. Converts feruloyl CoA into 6'-hydroxyferuloyl CoA but has no activity with ferulic acid, feruloylquinic acid, caffeic acid, caffeoyl CoA, p-coumaric acid, cinnamic acid, cinnamoyl CoA or benzoyl CoA.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|Q9C899|F6H2_ARATH Feruloyl CoA ortho-hydroxylase 2 OS=Arabidopsis thaliana GN=F6'H2 PE=1 SV=1 Back     alignment and function description
>sp|A2A1A0|NCS1_COPJA S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1 Back     alignment and function description
>sp|O04395|FLS_MATIN Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1 Back     alignment and function description
>sp|Q05965|FL3H_MATIN Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|Q9S818|FL3H_ARATH Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1 Back     alignment and function description
>sp|Q05963|FL3H_CALCH Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|Q07353|FL3H_PETHY Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1 Back     alignment and function description
>sp|P54847|ACCO3_CUCME 1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1 Back     alignment and function description
>sp|Q84MB3|ACCH1_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query287
354696022363 citrus dioxygenase [Citrus limetta] 0.996 0.787 0.685 1e-131
297834358361 oxidoreductase [Arabidopsis lyrata subsp 0.989 0.786 0.470 3e-89
15231296361 oxidoreductase, 2OG-Fe(II) oxygenase fam 0.989 0.786 0.462 3e-87
297829900361 oxidoreductase [Arabidopsis lyrata subsp 0.989 0.786 0.465 4e-87
15222690361 2-oxoglutarate (2OG) and Fe(II)-dependen 0.937 0.745 0.475 3e-86
356522918355 PREDICTED: 1-aminocyclopropane-1-carboxy 0.951 0.769 0.489 4e-86
356503141353 PREDICTED: 1-aminocyclopropane-1-carboxy 0.940 0.764 0.485 3e-83
297746450253 unnamed protein product [Vitis vinifera] 0.839 0.952 0.476 4e-63
388513667354 unknown [Medicago truncatula] 0.937 0.759 0.385 7e-63
357458879353 Flavonol synthase/flavanone 3-hydroxylas 0.933 0.759 0.377 8e-60
>gi|354696022|gb|AER36089.1| citrus dioxygenase [Citrus limetta] Back     alignment and taxonomy information
 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/362 (68%), Positives = 259/362 (71%), Gaps = 76/362 (20%)

Query: 1   MAPTNGSTVVTESWDIVDFVIHKGHGVKGLSEKGLKSLPKQFHQPLEERFSEKRILDQ-- 58
           MAPTNGS + T+SWD+ DFV++KGHGVKGLSE GLKSLPKQFHQPLEERFSEK+ILDQ  
Sbjct: 1   MAPTNGSILATQSWDLTDFVVNKGHGVKGLSEMGLKSLPKQFHQPLEERFSEKKILDQVS 60

Query: 59  ----------SPEVAKFICDAAENWGFFQIVNHGVALEVLERVKEATHRFFALPAEEKRK 108
                     SPEVAK ICD AENWGFFQIVNHGV LEVLERVKEATHRFFALPAEEKRK
Sbjct: 61  IPLIDMSKWESPEVAKSICDTAENWGFFQIVNHGVPLEVLERVKEATHRFFALPAEEKRK 120

Query: 109 YSKENSPTKNVRYGSSFAPHVERALEWKDFLSLFYVSEEETSAFWPLVCKDEMLEYMRSS 168
           YSKENSP  NVRYGSSF PHVERALEWKDFLSLFYVSEEETSAFWP VCKDEMLEYMRSS
Sbjct: 121 YSKENSPINNVRYGSSFVPHVERALEWKDFLSLFYVSEEETSAFWPPVCKDEMLEYMRSS 180

Query: 169 E-----------------------------------------------------DDIGGL 175
           E                                                      DI   
Sbjct: 181 EVFIKRLMHVLVKVLNVKRIDEIREPMLLGSRRVNLNYYPMCPNPELTVGVGRHSDISTF 240

Query: 176 HVRKDNGTGWIHAAPISGS-----------LIINIGDALQIMSNGRNKSIEHCVIANGSQ 224
            +   +  G +H    +G+           LIINIGDALQIMSNGRNKSIEHCVIANGSQ
Sbjct: 241 TILLQDDIGGLHVRKDNGTDWIHAAPISGSLIINIGDALQIMSNGRNKSIEHCVIANGSQ 300

Query: 225 NRISVPLFVNPKPEAILCPFPEVLANGEKPLYKPVLYADYSRHFYTKAHDGKKTIDFAKI 284
           NRISVPLFVNPKPEAILCPFPEVLANGEKPLYKPVLYADYSRHFYTKAHDGKKTIDFAKI
Sbjct: 301 NRISVPLFVNPKPEAILCPFPEVLANGEKPLYKPVLYADYSRHFYTKAHDGKKTIDFAKI 360

Query: 285 SD 286
            D
Sbjct: 361 GD 362

Source: Citrus limetta

Species: Citrus limetta

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297834358|ref|XP_002885061.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] gi|297330901|gb|EFH61320.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15231296|ref|NP_187970.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] gi|75311178|sp|Q9LHN8.1|F6H1_ARATH RecName: Full=Feruloyl CoA ortho-hydroxylase 1 gi|11994563|dbj|BAB02603.1| leucoanthocyanidin dioxygenase-like protein [Arabidopsis thaliana] gi|44917567|gb|AAS49108.1| At3g13610 [Arabidopsis thaliana] gi|62320500|dbj|BAD95049.1| hypothetical protein [Arabidopsis thaliana] gi|332641861|gb|AEE75382.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297829900|ref|XP_002882832.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] gi|297328672|gb|EFH59091.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15222690|ref|NP_175925.1| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] gi|75308873|sp|Q9C899.1|F6H2_ARATH RecName: Full=Feruloyl CoA ortho-hydroxylase 2 gi|12323164|gb|AAG51560.1|AC027034_6 leucoanthocyanidin dioxygenase 2, putative; 51024-52213 [Arabidopsis thaliana] gi|40823177|gb|AAR92264.1| At1g55290 [Arabidopsis thaliana] gi|45752706|gb|AAS76251.1| At1g55290 [Arabidopsis thaliana] gi|332195098|gb|AEE33219.1| 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356522918|ref|XP_003530089.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Glycine max] Back     alignment and taxonomy information
>gi|356503141|ref|XP_003520370.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Glycine max] Back     alignment and taxonomy information
>gi|297746450|emb|CBI16506.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|388513667|gb|AFK44895.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|357458879|ref|XP_003599720.1| Flavonol synthase/flavanone 3-hydroxylase [Medicago truncatula] gi|355488768|gb|AES69971.1| Flavonol synthase/flavanone 3-hydroxylase [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query287
TAIR|locus:2086789361 AT3G13610 [Arabidopsis thalian 0.588 0.468 0.549 1.3e-92
TAIR|locus:2035671361 AT1G55290 [Arabidopsis thalian 0.536 0.426 0.565 1.9e-91
TAIR|locus:2090359357 AT3G12900 [Arabidopsis thalian 0.533 0.428 0.458 6.9e-63
TAIR|locus:505006595360 AT5G12270 [Arabidopsis thalian 0.554 0.441 0.381 1.1e-54
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.383 0.311 0.375 7.5e-38
TAIR|locus:2169697371 AT5G05600 [Arabidopsis thalian 0.383 0.296 0.375 7e-35
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.421 0.332 0.346 1.3e-34
TAIR|locus:2098876370 AT3G61400 [Arabidopsis thalian 0.344 0.267 0.401 8.6e-31
TAIR|locus:2020798398 2A6 [Arabidopsis thaliana (tax 0.358 0.258 0.401 1.4e-30
TAIR|locus:2052796362 AT2G30840 [Arabidopsis thalian 0.386 0.306 0.384 6.3e-30
TAIR|locus:2086789 AT3G13610 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 513 (185.6 bits), Expect = 1.3e-92, Sum P(2) = 1.3e-92
 Identities = 100/182 (54%), Positives = 134/182 (73%)

Query:     1 MAPTNGSTVVTESWDIVDFVIHKGHGVKGLSEKGLKSLPKQFHQPLEERFSEK------- 53
             MAPT  +T  +   ++ DFV++KG+GVKGLSE G+K+LP+Q+ QPLEER   K       
Sbjct:     1 MAPTLLTTQFSNPAEVTDFVVYKGNGVKGLSETGIKALPEQYIQPLEERLINKFVNETDE 60

Query:    54 --RILDQS-PE---VAKFICDAAENWGFFQIVNHGVALEVLERVKEATHRFFALPAEEKR 107
                ++D S P+   VA+ +CDAAE WGFFQ++NHGV LEVL+ VK ATH+FF LP EEKR
Sbjct:    61 AIPVIDMSNPDEDRVAEAVCDAAEKWGFFQVINHGVPLEVLDDVKAATHKFFNLPVEEKR 120

Query:   108 KYSKENSPTKNVRYGSSFAPHVERALEWKDFLSLFYVSEEETSAFWPLVCKDEMLEYMRS 167
             K++KENS +  VR+G+SF+P  E+ALEWKD+LSLF+VSE E   FWP +C++E LEY+  
Sbjct:   121 KFTKENSLSTTVRFGTSFSPLAEQALEWKDYLSLFFVSEAEAEQFWPDICRNETLEYINK 180

Query:   168 SE 169
             S+
Sbjct:   181 SK 182
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0019748 "secondary metabolic process" evidence=ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0010421 "hydrogen peroxide-mediated programmed cell death" evidence=IMP
GO:0009805 "coumarin biosynthetic process" evidence=RCA;IMP
GO:0051213 "dioxygenase activity" evidence=IDA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0009611 "response to wounding" evidence=RCA
GO:0010583 "response to cyclopentenone" evidence=RCA
TAIR|locus:2035671 AT1G55290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090359 AT3G12900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006595 AT5G12270 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2169697 AT5G05600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2098876 AT3G61400 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020798 2A6 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052796 AT2G30840 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query287
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 2e-26
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 2e-26
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 3e-26
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 3e-23
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 3e-23
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 9e-21
PLN02947374 PLN02947, PLN02947, oxidoreductase 4e-20
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 1e-19
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 5e-19
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 8e-19
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 2e-17
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 2e-17
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 2e-17
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 6e-17
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 3e-16
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 4e-16
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 3e-15
PLN02485329 PLN02485, PLN02485, oxidoreductase 3e-15
PLN02216357 PLN02216, PLN02216, protein SRG1 4e-15
PLN02704335 PLN02704, PLN02704, flavonol synthase 6e-15
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 1e-14
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 5e-14
PLN02947374 PLN02947, PLN02947, oxidoreductase 9e-14
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 1e-13
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 1e-12
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 1e-12
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 1e-11
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 1e-11
PLN02704335 PLN02704, PLN02704, flavonol synthase 2e-11
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 2e-11
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 2e-11
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 3e-11
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 5e-11
PLN02904357 PLN02904, PLN02904, oxidoreductase 1e-10
PLN02997325 PLN02997, PLN02997, flavonol synthase 3e-10
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 3e-10
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 5e-10
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 5e-10
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 6e-08
PLN02485329 PLN02485, PLN02485, oxidoreductase 7e-08
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 1e-07
PLN03176120 PLN03176, PLN03176, flavanone-3-hydroxylase; Provi 2e-07
PLN02904357 PLN02904, PLN02904, oxidoreductase 9e-07
PLN02997325 PLN02997, PLN02997, flavonol synthase 1e-06
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 3e-06
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 1e-05
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 2e-05
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 2e-04
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 0.003
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
 Score =  105 bits (264), Expect = 2e-26
 Identities = 44/111 (39%), Positives = 69/111 (62%), Gaps = 2/111 (1%)

Query: 174 GLHVRKDNGTGWIHAAPISGSLIINIGDALQIMSNGRNKSIEHCVIANGSQNRISVPLFV 233
           GL + KDN   W+   P+  +L+INIGD L++++NG+ KS+EH  + N  ++R+S+  F 
Sbjct: 251 GLQILKDNT--WVPVHPVPNALVINIGDTLEVLTNGKYKSVEHRAVTNKEKDRLSIVTFY 308

Query: 234 NPKPEAILCPFPEVLANGEKPLYKPVLYADYSRHFYTKAHDGKKTIDFAKI 284
            P  E  L P PE++ +     Y+   + +YSRH+ T    GKKT++FAKI
Sbjct: 309 APSYEVELGPMPELVDDENPCKYRRYNHGEYSRHYVTSKLQGKKTLEFAKI 359

Length = 361
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|178720 PLN03176, PLN03176, flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 287
PLN02216357 protein SRG1 100.0
PLN02947374 oxidoreductase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02904357 oxidoreductase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02704335 flavonol synthase 100.0
PLN02276361 gibberellin 20-oxidase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02997325 flavonol synthase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02485329 oxidoreductase 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.91
PLN03176120 flavanone-3-hydroxylase; Provisional 99.87
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.66
>PLN02216 protein SRG1 Back     alignment and domain information 
Probab=100.00  E-value=6.2e-67  Score=491.25  Aligned_cols=256  Identities=27%  Similarity=0.542  Sum_probs=232.6

Q ss_pred             CchhHHHhC-CCCCCCCcccCCCCCCCC---------CCceeeCCH--------HHHHHHHHHHHHcCeEEEecCCCCHH
Q 044257           25 HGVKGLSEK-GLKSLPKQFHQPLEERFS---------EKRILDQSP--------EVAKFICDAAENWGFFQIVNHGVALE   86 (287)
Q Consensus        25 ~~v~~l~~~-~~~~~P~~y~~~~~~~~~---------~iPvIDls~--------~~~~~l~~A~~~~GFF~v~nHGi~~~   86 (287)
                      .+|+.|+.+ ++++||++||+|+++++.         +||||||+.        +++++|.+||++||||||+||||+.+
T Consensus        15 ~~~~~~~~~~~~~~~p~~~v~p~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~l~~Ac~~~GFF~v~nHGI~~~   94 (357)
T PLN02216         15 PSVQEMVKEKMITTVPPRYVRSDQDKTEIAVDSGLSSEIPIIDMKRLCSSTAMDSEVEKLDFACKEWGFFQLVNHGIDSS   94 (357)
T ss_pred             hhHHHHHhcCCCCCCCHhhCcCcccCCccccccCcCCCCCeEEChhccCCccHHHHHHHHHHHHHHCcEEEEECCCCCHH
Confidence            359999887 899999999999877642         599999975        58899999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCHHHHhhhccCCCCCCccccCCCCCCCcccccCceeceeeeccc-CcccccCCCc---hhHHHHH
Q 044257           87 VLERVKEATHRFFALPAEEKRKYSKENSPTKNVRYGSSFAPHVERALEWKDFLSLFYVS-EEETSAFWPL---VCKDEML  162 (287)
Q Consensus        87 ~i~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~~GY~~~~~~~~~~~~dw~e~~~~~~~p-~~~~~~~wP~---~fr~~~~  162 (287)
                      ++++|++++++||+||.|+|+++....  +..+||+........+..||+|.|.+...| ....++.||+   .||++++
T Consensus        95 li~~~~~~~~~FF~LP~eeK~k~~~~~--~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~WP~~p~~fr~~~~  172 (357)
T PLN02216         95 FLDKVKSEIQDFFNLPMEEKKKLWQRP--GEIEGFGQAFVVSEDQKLDWADMFFLTMQPVRLRKPHLFPKLPLPFRDTLE  172 (357)
T ss_pred             HHHHHHHHHHHHHcCCHHHHHhhhcCC--CCccccCccccccccccCCceeeeeeeccCcccccchhcccchHHHHHHHH
Confidence            999999999999999999999997642  457899766544455678999999887666 4456788997   8999999


Q ss_pred             HHHHHc----------------------------------------------------------------c-CCCCceEE
Q 044257          163 EYMRSS----------------------------------------------------------------E-DDIGGLHV  177 (287)
Q Consensus       163 ~y~~~~----------------------------------------------------------------q-d~v~GLQV  177 (287)
                      +|+++|                                                                | ++++||||
T Consensus       173 ~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTlL~q~~~v~GLQV  252 (357)
T PLN02216        173 TYSAEVKSIAKILFAKMASALEIKPEEMEKLFDDDLGQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTILLQVNEVEGLQI  252 (357)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCchheeEEeecCCCCCcccccCccCcccCceEEEEEecCCCCceeE
Confidence            999988                                                                7 57999999


Q ss_pred             EeCCCCceEEEeecCCceEEechhHHHHHhCCcccccccceecCCCCCcceeEEeecCCCCceEecCccccCCCCCCCCC
Q 044257          178 RKDNGTGWIHAAPISGSLIINIGDALQIMSNGRNKSIEHCVIANGSQNRISVPLFVNPKPEAILCPFPEVLANGEKPLYK  257 (287)
Q Consensus       178 ~~~g~~~Wv~V~p~pgalvVNiGD~Le~lSnG~~kS~~HRV~~~~~~~R~Sia~F~~P~~d~~i~P~~elv~~~~p~~y~  257 (287)
                      +++|  +|++|+|+||+|||||||+||+||||+|||++|||++++.++||||+||++|+.|++|+|+++|+++++|++|+
T Consensus       253 ~~~g--~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~lv~~~~p~~Y~  330 (357)
T PLN02216        253 KKDG--KWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVATFHNTGMGKEIGPAKSLVERQKAALFK  330 (357)
T ss_pred             EECC--EEEECCCCCCeEEEEcchhhHhhcCCeeeccCceeecCCCCCEEEEEEEecCCCCCeEeCcHHHcCCCCCCCCC
Confidence            9999  99999999999999999999999999999999999999889999999999999999999999999999999999


Q ss_pred             CccHHHHHHHHHHhcCCCCcccccccc
Q 044257          258 PVLYADYSRHFYTKAHDGKKTIDFAKI  284 (287)
Q Consensus       258 ~~t~~ey~~~~~~~~~~gk~~l~~~~~  284 (287)
                      ++|++||+..++++.+.++..||.+||
T Consensus       331 ~~t~~ey~~~~~~~~~~~~~~~~~~~~  357 (357)
T PLN02216        331 SLTTKEYFDGLFSRELDGKAYLDAMRI  357 (357)
T ss_pred             CcCHHHHHHHHHhcccCCcchhhhhcC
Confidence            999999999999999999999999986

>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query287
1w9y_A319 The Structure Of Acc Oxidase Length = 319 4e-16
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 5e-14
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-08
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 5e-14
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-08
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 2e-13
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 5e-08
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 9e-08
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure 
Iteration: 1

 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 67/268 (25%)
Query: 66  ICDAAENWGFFQIVNHGVALEVLERVKEAT---------HRFFALPAEE----------- 105
           I DA ENWGFF++VNHG+  EV + V++ T          RF  L A +           
Sbjct: 24  IKDACENWGFFELVNHGIPREVXDTVEKXTKGHYKKCXEQRFKELVASKALEGVQAEVTD 83
Query: 106 ---KRKYSKENSPTKNV-----------RYGSSFAPHVER-ALEWKDFL----------- 139
              +  +  ++ P  N+                FA  +E+ A E  D L           
Sbjct: 84  XDWESTFFLKHLPISNISEVPDLDEEYREVXRDFAKRLEKLAEELLDLLCENLGLEKGYL 143
Query: 140 -SLFYVSEEET----SAFWPLVCKDEMLEYMRS-----------SEDDIGGLHVRKDNGT 183
            + FY S+        + +P   K ++++ +R+            +D + GL + KD   
Sbjct: 144 KNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQ- 202
Query: 184 GWIHAAPISGSLIINIGDALQIMSNGRNKSIEHCVIANGSQNRISVPLFVNPKPEAILCP 243
            WI   P   S+++N+GD L++++NG+ KS+ H VIA     R S+  F NP  +A++ P
Sbjct: 203 -WIDVPPXRHSIVVNLGDQLEVITNGKYKSVXHRVIAQKDGARXSLASFYNPGSDAVIYP 261
Query: 244 FPEVL---ANGEKPLYKPVLYADYSRHF 268
            P ++   A   K +Y   ++ DY + +
Sbjct: 262 APALVEKEAEENKQVYPKFVFDDYXKLY 289
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query287
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 2e-42
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 9e-40
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 7e-41
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 2e-29
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 4e-29
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 2e-16
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 3e-24
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 1e-23
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 3e-23
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 3e-17
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 6e-23
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 1e-19
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  148 bits (375), Expect = 2e-42
 Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 28/168 (16%)

Query: 27  VKGLSEKGLKSLPKQFHQPLEERFSEKRILDQSP------------------------EV 62
           V+ L++ G+ S+PK++ +P EE  S   +  +                            
Sbjct: 7   VESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENC 66

Query: 63  AKFICDAAENWGFFQIVNHGVALEVLERVKEATHRFFALPAEEKRKYSKENSPTKNVRYG 122
            + +  A+ +WG   ++NHG+  +++ERVK+A   FF+L  EEK KY+ + +  K   YG
Sbjct: 67  IEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYG 126

Query: 123 SSFAPHVERALEWKDFLSLF-YVSEEETSAFWP---LVCKDEMLEYMR 166
           S  A +    LEW+D+     Y  E+   + WP       +   EY +
Sbjct: 127 SKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAK 174
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query287
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=1.2e-65  Score=481.87  Aligned_cols=254  Identities=29%  Similarity=0.536  Sum_probs=227.2

Q ss_pred             CCchhHHHhCCCCCCCCcccCCCCCCCC--------------CCceeeCCH----------HHHHHHHHHHHHcCeEEEe
Q 044257           24 GHGVKGLSEKGLKSLPKQFHQPLEERFS--------------EKRILDQSP----------EVAKFICDAAENWGFFQIV   79 (287)
Q Consensus        24 ~~~v~~l~~~~~~~~P~~y~~~~~~~~~--------------~iPvIDls~----------~~~~~l~~A~~~~GFF~v~   79 (287)
                      ..+||+|+++|+++||++|++|+++++.              +||||||+.          +++++|.+||++||||||+
T Consensus         4 ~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~   83 (356)
T 1gp6_A            4 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   83 (356)
T ss_dssp             CCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             cccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEe
Confidence            4679999999999999999998554332              399999975          3789999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHhcCCCHHHHhhhccCCCCCCccccCCCCCCCcccccCceeceeeeccc-CcccccCCCc---
Q 044257           80 NHGVALEVLERVKEATHRFFALPAEEKRKYSKENSPTKNVRYGSSFAPHVERALEWKDFLSLFYVS-EEETSAFWPL---  155 (287)
Q Consensus        80 nHGi~~~~i~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~~GY~~~~~~~~~~~~dw~e~~~~~~~p-~~~~~~~wP~---  155 (287)
                      ||||+.++++++++++++||+||.|+|+++.........+||+........+..||+|+|.+...| ....++.||+   
T Consensus        84 nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~  163 (356)
T 1gp6_A           84 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS  163 (356)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcch
Confidence            999999999999999999999999999999875310357899876655566788999999998777 3456788998   


Q ss_pred             hhHHHHHHHHHHc------------------------------------------------------------------c
Q 044257          156 VCKDEMLEYMRSS------------------------------------------------------------------E  169 (287)
Q Consensus       156 ~fr~~~~~y~~~~------------------------------------------------------------------q  169 (287)
                      .||+++++|+++|                                                                  |
T Consensus       164 ~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~q  243 (356)
T 1gp6_A          164 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH  243 (356)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEE
Confidence            8999999999987                                                                  7


Q ss_pred             CCCCceEEEeCCCCceEEEeecCCceEEechhHHHHHhCCcccccccceecCCCCCcceeEEeecCCCCc-eEecCcccc
Q 044257          170 DDIGGLHVRKDNGTGWIHAAPISGSLIINIGDALQIMSNGRNKSIEHCVIANGSQNRISVPLFVNPKPEA-ILCPFPEVL  248 (287)
Q Consensus       170 d~v~GLQV~~~g~~~Wv~V~p~pgalvVNiGD~Le~lSnG~~kS~~HRV~~~~~~~R~Sia~F~~P~~d~-~i~P~~elv  248 (287)
                      |+++||||+++|  +|++|+|+||+|||||||+||+||||+|||++|||+++++++|||+|||++|+.|+ +|+|+++|+
T Consensus       244 d~v~GLQV~~~g--~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~  321 (356)
T 1gp6_A          244 NMVPGLQLFYEG--KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMV  321 (356)
T ss_dssp             CSCCCEEEEETT--EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGC
T ss_pred             cCCCCeEEecCC--cEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhc
Confidence            889999999999  99999999999999999999999999999999999999889999999999999999 999999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHHhcCCCCccc
Q 044257          249 ANGEKPLYKPVLYADYSRHFYTKAHDGKKTI  279 (287)
Q Consensus       249 ~~~~p~~y~~~t~~ey~~~~~~~~~~gk~~l  279 (287)
                      ++++|++|+++|++||+..++.+.++|+..-
T Consensus       322 ~~~~p~~y~~~t~~eyl~~~~~~~~d~~~~~  352 (356)
T 1gp6_A          322 SVESPAKFPPRTFAQHIEHKLFGKEQEELVS  352 (356)
T ss_dssp             CSSSCCSSCCEEHHHHHHHHHHHHHHHHC--
T ss_pred             CCCCCccCCCccHHHHHHHHHHhccCcchhh
Confidence            9999999999999999999998888877543
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 287
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 3e-34
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 3e-22
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 4e-22
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 1e-16
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 4e-16
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 3e-15
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 9e-11
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

 Score =  124 bits (311), Expect = 3e-34
 Identities = 61/284 (21%), Positives = 114/284 (40%), Gaps = 63/284 (22%)

Query: 57  DQSPEVAKFICDAAENWGFFQIVNHGVALEVLERVKEATHRFFALPAEEKRKYSKENSPT 116
            +     + I DA ENWGFF++VNHG+  EV++ V++ T   +    E++ K    +   
Sbjct: 14  VERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKAL 73

Query: 117 KNVRYGSSFAPHVERA-------------------------------------------- 132
           + V+   +                                                    
Sbjct: 74  EGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCE 133

Query: 133 ---LEWKDFLSLFYVSEEETSAF----WPLVCKDEMLEYMRSSEDDIGGLHVRKDNGTG- 184
              LE     + FY S+          +P   K ++++ +R+  D  G + + +D+    
Sbjct: 134 NLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSG 193

Query: 185 --------WIHAAPISGSLIINIGDALQIMSNGRNKSIEHCVIANGSQNRISVPLFVNPK 236
                   WI   P+  S+++N+GD L++++NG+ KS+ H VIA     R+S+  F NP 
Sbjct: 194 LQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPG 253

Query: 237 PEAILCPFPEVL---ANGEKPLYKPVLYADYSRHFYTKAHDGKK 277
            +A++ P P ++   A   K +Y   ++ DY + +       K+
Sbjct: 254 SDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKE 297
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query287
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.7e-64  Score=465.97  Aligned_cols=245  Identities=30%  Similarity=0.559  Sum_probs=217.7

Q ss_pred             CCchhHHHhCCCCCCCCcccCCCCCCCC--------------CCceeeCCH----------HHHHHHHHHHHHcCeEEEe
Q 044257           24 GHGVKGLSEKGLKSLPKQFHQPLEERFS--------------EKRILDQSP----------EVAKFICDAAENWGFFQIV   79 (287)
Q Consensus        24 ~~~v~~l~~~~~~~~P~~y~~~~~~~~~--------------~iPvIDls~----------~~~~~l~~A~~~~GFF~v~   79 (287)
                      +.+||+|+++|+++||++||+|+++++.              +||||||+.          +++++|.+||++||||||+
T Consensus         3 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~~GFf~l~   82 (349)
T d1gp6a_           3 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI   82 (349)
T ss_dssp             CCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             CcchHHHHhCCCccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHhCCEEEEE
Confidence            3579999999999999999999887765              699999985          5789999999999999999


Q ss_pred             cCCCCHHHHHHHHHHHHHhcCCCHHHHhhhccCCCCCCccccCCCCCCCcccccCceeceeeeccc-CcccccCCCc---
Q 044257           80 NHGVALEVLERVKEATHRFFALPAEEKRKYSKENSPTKNVRYGSSFAPHVERALEWKDFLSLFYVS-EEETSAFWPL---  155 (287)
Q Consensus        80 nHGi~~~~i~~~~~~~~~FF~lp~eeK~~~~~~~~~~~~~GY~~~~~~~~~~~~dw~e~~~~~~~p-~~~~~~~wP~---  155 (287)
                      ||||+.++++++++++++||+||.|+|++|......+...||+...........+|.+.+.....+ ....++.||+   
T Consensus        83 nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~~~~  162 (349)
T d1gp6a_          83 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPS  162 (349)
T ss_dssp             SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSST
T ss_pred             ccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhcccccccccccccccccccc
Confidence            999999999999999999999999999999865432344566655555566677888877655455 4456788997   


Q ss_pred             hhHHHHHHHHHHc------------------------------------------------------------------c
Q 044257          156 VCKDEMLEYMRSS------------------------------------------------------------------E  169 (287)
Q Consensus       156 ~fr~~~~~y~~~~------------------------------------------------------------------q  169 (287)
                      .|++.+++|+++|                                                                  |
T Consensus       163 ~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q  242 (349)
T d1gp6a_         163 DYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILH  242 (349)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEec
Confidence            8999999999887                                                                  8


Q ss_pred             CCCCceEEEeCCCCceEEEeecCCceEEechhHHHHHhCCcccccccceecCCCCCcceeEEeecCCCCceE-ecCcccc
Q 044257          170 DDIGGLHVRKDNGTGWIHAAPISGSLIINIGDALQIMSNGRNKSIEHCVIANGSQNRISVPLFVNPKPEAIL-CPFPEVL  248 (287)
Q Consensus       170 d~v~GLQV~~~g~~~Wv~V~p~pgalvVNiGD~Le~lSnG~~kS~~HRV~~~~~~~R~Sia~F~~P~~d~~i-~P~~elv  248 (287)
                      +.++||||+++|  +|++|+|.||++|||+||+||+||||+|||+.|||+.|++++||||+||++|+.|++| +|+++||
T Consensus       243 ~~~~GLqv~~~g--~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v  320 (349)
T d1gp6a_         243 NMVPGLQLFYEG--KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMV  320 (349)
T ss_dssp             CSCCCEEEEETT--EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGC
T ss_pred             cCCcceeeecCC--ceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHc
Confidence            999999999999  9999999999999999999999999999999999999999999999999999999765 8999999


Q ss_pred             CCCCCCCCCCccHHHHHHHHHH
Q 044257          249 ANGEKPLYKPVLYADYSRHFYT  270 (287)
Q Consensus       249 ~~~~p~~y~~~t~~ey~~~~~~  270 (287)
                      ++++|++|+++|++||++.++.
T Consensus       321 ~~~~p~~y~~~t~~e~~~~rl~  342 (349)
T d1gp6a_         321 SVESPAKFPPRTFAQHIEHKLF  342 (349)
T ss_dssp             CSSSCCSSCCEEHHHHHHHHHH
T ss_pred             CCCCCCCCCCccHHHHHHHHHh
Confidence            9999999999999999999873
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure